RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FANCC (Homo sapiens)

Ensembl gene IDs: ENSG00000158169

Ensembl transcript IDs: ENST00000289081.8, ENST00000375305.6, ENST00000433644.2, ENST00000433829.1, ENST00000464653.1, ENST00000474949.1, ENST00000477942.5, ENST00000480712.5, ENST00000490972.7, ENST00000493098.1, ENST00000636777.1, ENST00000647778.1, ENST00000647882.1, ENST00000648415.1, ENST00000649334.1, ENST00000649519.1, ENST00000649611.1, ENST00000649701.1, ENST00000649872.1, ENST00000650176.1

Found 728 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGGCTGCTGGGGAGCGAGACAGGGCCCTGGCTGTGGCCAGGCTCTaGTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACG +
Preference number: 1 (lower is better)
Translates to: RAAGERDRALAVARL*CRHTPQNSPPLQGT
Trigger: CGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGCCAGGGCCCTGTCTCGCTCCCCAGCAGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR GCA 90 bp GCTGCTGGGGAGCGAGACAGGGCCCTGGCTGTGGCCAGGCTCTGCTaGCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCT +
Preference number: 1 (lower is better)
Translates to: AAGERDRALAVARLC*RHTPQNSPPLQGTP
Trigger: AGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGCCAGGGCCCTGTCTCGCTCCCCAGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR GCA 90 bp GCCACGTCCCCAGAGGGACAGTCCTCCCACCCAGGAACCCCTGGCTaGCCAGAAAGCACCACCGGCAAGGCCGCCTCCACCGCACCCGTG +
Preference number: 1 (lower is better)
Translates to: ATSPEGQSSHPGTPG*PESTTGKAASTAPV
Trigger: CACGGGTGCGGTGGAGGCGGCCTTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 90 bp CAGTGCCACGTCCCCAGAGGGACAGTCCTCCCACCCAGGAACCCCTaGCTGCCCAGAAAGCACCACCGGCAAGGCCGCCTCCACCGCACC +
Preference number: 1 (lower is better)
Translates to: QCHVPRGTVLPPRNP*LPRKHHRQGRLHRT
Trigger: GGTGCGGTGGAGGCGGCCTTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 90 bp TCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATaGCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTGCCGAAATCG +
Preference number: 1 (lower is better)
Translates to: SRPPRPRRVPAQHLG*HSFPVAPAQALPKS
Trigger: CGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 90 bp TGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTaGAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCA +
Preference number: 1 (lower is better)
Translates to: WPGSAAGTPLRTARL*RARLGGRDPGADMA
Trigger: TGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR TCA 90 bp CGGCAAGGCCGCCTCCACCGCACCCGTGAGAGGACTCGGCAGCTGTaGAGGAACTGGGAGATTCTGCAGATGGGCCGAGGTCAGGGCTTC +
Preference number: 1 (lower is better)
Translates to: RQGRLHRTRERTRQL*RNWEILQMGRGQGF
Trigger: GAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTTGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 90 bp CACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTaGCACCTGCCCAGGCTTTGCCGAAATCGAAGGCAACAAGAGGGG +
Preference number: 1 (lower is better)
Translates to: HAASPPSISDAIPSR*HLPRLCRNRRQQEG
Trigger: CCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 90 bp CCGAAATCGAAGGCAACAAGAGGGGGAGGTGGGCTTAAGAGTGCCTaGCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAATGGCCGAGGG +
Preference number: 1 (lower is better)
Translates to: PKSKATRGGGGLKSA*PAATCLGGGGNGRG
Trigger: CCCTCGGCCATTCCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 90 bp CGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTaGCCAGGCTTTGCCGAAATCGAAGGCAACAAGAGGGGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: RPRPASRMPFLPGGT*PGFAEIEGNKRGRW
Trigger: CCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 90 bp TCCAAGAAAGGAGACAGTCAAGATGGAAGCAAGCCCTGGCCGGGCTaGTGGGGAGCGAGACAGGGCCCTGGCTGTGGCCAGGCTCTGCTG +
Preference number: 1 (lower is better)
Translates to: SKKGDSQDGSKPWPG*WGARQGPGCGQALL
Trigger: CAGCAGAGCCTGGCCACAGCCAGGGCCCTGTCTCGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATCTTGACTGTCTCCTTTCTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR TCA 90 bp GCTGCCCAGAAAGCACCACCGGCAAGGCCGCCTCCACCGCACCCGTaGGAGGACTCGGCAGCTGTGAAGGAACTGGGAGATTCTGCAGAT +
Preference number: 1 (lower is better)
Translates to: AAQKAPPARPPPPHP*EDSAAVKELGDSAD
Trigger: ATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTTGCCGGTGGTGCTTTCTGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 90 bp AGAGTGGAAAGAGTGTGCCGGAGGCCCGGGCTTGGGTGTGCTGTCTaGTCCTGTGGCCTGTCAGGCAGGTCCAGGGAGACACAAGGGAAG +
Preference number: 1 (lower is better)
Translates to: RVERVCRRPGLGCAV*SCGLSGRSRETQGK
Trigger: CTTCCCTTGTGTCTCCCTGGACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 90 bp GGAGGAGGAAGAGGCCAACCCTGTACACAGGACCACAGGACAGGGTaGAGGACTGTCCCAGGAGTCCCTCCACAACAGGAGGCCTGGTCC +
Preference number: 1 (lower is better)
Translates to: GGGRGQPCTQDHRTG*RTVPGVPPQQEAWS
Trigger: GGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCCTCTTCCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 90 bp CTGAGGTCTGTGTCTGTGCCCTGTCCTGCTACCGTCTGCAGGTCCTaGGCTGAGAGGCTGCTGCTTCTGGACATTGCCAGGAGGTGGCCC +
Preference number: 1 (lower is better)
Translates to: LRSVSVPCPATVCRS*AERLLLLDIARRWP
Trigger: GGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCTGCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR CCA 90 bp CATCACGGGGGCCGTAGTAGAAGGCCAAGAGCCACAGCAGGGCCGTaGGGGGTTCGGCTGCCGACATCAGTAATTGCTCTGCCACCATCT +
Preference number: 1 (lower is better)
Translates to: HHGGRSRRPRATAGP*GVRLPTSVIALPPS
Trigger: AGATGGTGGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR GCA 90 bp GTACAGCTCATTCTCACAGCCCAGCGAGGGCACTTACTCCACAAATaGGTGGCCACAGGTCATCACCTGTCCTGTGGCCCTGGCGAGCCT +
Preference number: 1 (lower is better)
Translates to: VQLILTAQRGHLLHK*VATGHHLSCGPGEP
Trigger: AGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 90 bp AGCTCATTCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTaGCCACAGGTCATCACCTGTCCTGTGGCCCTGGCGAGCCTGATC +
Preference number: 1 (lower is better)
Translates to: SSFSQPSEGTYSTNA*PQVITCPVALASLI
Trigger: GATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 90 bp AGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTaGCGAAATCGAAGGCAACAAGAGGGGGAGGTGGGCTTAAGAGTG +
Preference number: 1 (lower is better)
Translates to: SISDAIPSRWHLPRL*RNRRQQEGEVGLRV
Trigger: CACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR TCA 90 bp CTCCTGTGGCCTGTCAGGCAGGTCCAGGGAGACACAAGGGAAGCCTaGGGGACCCTGACTCCCCTTGAAGAATTTCTCCATACAGCAAGA +
Preference number: 1 (lower is better)
Translates to: LLWPVRQVQGDTREA*GTLTPLEEFLHTAR
Trigger: TCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCTGGACCTGCCTGACAGGCCACAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 90 bp CCTCTGCCTCTCAAGTATGCACTCTGTGGGTGGGGCCCTAGAATCTaGTTCTCCAACAGGAGCACAACTCACCCCACTACACCAAAGGCT +
Preference number: 1 (lower is better)
Translates to: PLPLKYALCGWGPRI*FSNRSTTHPTTPKA
Trigger: AGCCTTTGGTGTAGTGGGGTGAGTTGTGCTCCTGTTGGAGAAGCAGATTCTAGGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649519.1
3UTR CCA 90 bp AGGGCAATGTTCACACCTCTGCCTCTCAAGTATGCACTCTGTGGGTaGGGCCCTAGAATCTGCTTCTCCAACAGGAGCACAACTCACCCC +
Preference number: 1 (lower is better)
Translates to: RAMFTPLPLKYALCG*GPRICFSNRSTTHP
Trigger: GGGGTGAGTTGTGCTCCTGTTGGAGAAGCAGATTCTAGGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGAGGTGTGAACATTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
3UTR TCA 90 bp AGGGACCTCCGCAGGACCCATGAGTCTGGTCTTCAACTGCTTCTCTaGGCAGTTCAGAAATATGCTTCAGTGTCTGGAGCCAGTGTCCCC +
Preference number: 1 (lower is better)
Translates to: RDLRRTHESGLQLLL*AVQKYASVSGASVP
Trigger: GGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR TCA 90 bp TCAGTAATTGCTCTGCCACCATCTCAGCCCATCCTCCGAAGTGAATaGACAGGAACCAGCTCTCAAAGGGACCTCCGCAGGACCCATGAG +
Preference number: 1 (lower is better)
Translates to: SVIALPPSQPILRSE*TGTSSQRDLRRTHE
Trigger: CTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCAGAGCAATTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR TCA 90 bp GACATCAGTAATTGCTCTGCCACCATCTCAGCCCATCCTCCGAAGTaGATGAACAGGAACCAGCTCTCAAAGGGACCTCCGCAGGACCCA +
Preference number: 1 (lower is better)
Translates to: DISNCSATISAHPPK*MNRNQLSKGPPQDP
Trigger: TGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCAGAGCAATTACTGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR GCA 90 bp TTGACTTGGGTAAAAACTAGAAACCTGTTCTCCCACCCAGGCCTTTaGTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCA +
Preference number: 1 (lower is better)
Translates to: LTWVKTRNLFSHPGL*FSNYQADGLAGRAP
Trigger: TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR TCA 90 bp TTGCTTGCTTTCTCCAGAGCTTCTACAAAGCACTGCGTAAACACCTaGATAGTGGCTATGATTTCCAGGGCCCCATCGGTTTCCAGGAGT +
Preference number: 1 (lower is better)
Translates to: LLAFSRASTKHCVNT*IVAMISRAPSVSRS
Trigger: ACTCCTGGAAACCGATGGGGCCCTGGAAATCATAGCCACTATTCAGGTGTTTACGCAGTGCTTTGTAGAAGCTCTGGAGAAAGCAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR TCA 90 bp GACTTGAGTTCGCAGCTCTTTAAGGAGCTCTCGGGCCAGTTTTTCTaGTCTAGGGCTTTCAATGCCAAGACGATTCCATCTGTACAAGGT +
Preference number: 1 (lower is better)
Translates to: DLSSQLFKELSGQFF*SRAFNAKTIPSVQG
Trigger: ACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR GCA 90 bp GATGGCAGCTGCCACCAAAATACTTTACCAGCACACCCTTCTGACTaGAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAAGTTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: DGSCHQNTLPAHPSD*SISQKKGSGEKFLE
Trigger: TTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTGGTGGCAGCTGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 90 bp AATCTTCTTCAGCAAAATGGCCTCGTTTACAGCCTCAAAGAACTCTaGCTGGAGGATTTCCTGAGGTTCACGTCCATGACAGATGAGGAG +
Preference number: 1 (lower is better)
Translates to: NLLQQNGLVYSLKEL*LEDFLRFTSMTDEE
Trigger: CTCCTCATCTGTCATGGACGTGAACCTCAGGAAATCCTCCAGCCAGAGTTCTTTGAGGCTGTAAACGAGGCCATTTTGCTGAAGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR TCA 90 bp AGGAGTACCGAAGGCTCACTTGAGTCATTAGTGAACATGTCTGACTaGGTCTGGGCTGAGGGACCTGGCTCTGCATTTTGTAAAATAGAT +
Preference number: 1 (lower is better)
Translates to: RSTEGSLESLVNMSD*VWAEGPGSAFCKID
Trigger: ATCTATTTTACAAAATGCAGAGCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTTGGCCCTGGCGAGCCTaGTCCCTCACGCCGGGCACC +
Preference number: 2 (lower is better)
Translates to: PANAVKAPSATPRPRPASWPWRA*SLTPGT
Trigger: GGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCA...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCTGGAGGTGGAGGGAATaGCCGAGGGGTGGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPWRWRE*PRGGSP
Trigger: GGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCA...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCCGGAGGCCCGGGCTTaGGTGTGCTGTCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: PANAVKAPSATPRPRPASPEARA*VCCLLL
Trigger: CAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGG...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGGCCGCCACCTGTCTTaGAGGTGGAGGGAATGGCCG +
Preference number: 2 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPGRHLS*RWREWP
Trigger: CGGCCATTCCCTCCACCTCCAAGACAGGTGGCGGCC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGGGCTTAAGAGTGCCTaGCCGGCCGCCACCTGTCTT +
Preference number: 2 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPGLKSA*PAATCL
Trigger: AAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCATTCCTTCCCGGTaGCACCTGCCCAGGCTTTGC +
Preference number: 2 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPAIPSR*HLPRLC
Trigger: GCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCCCAGCTCCCCACCTTTaGGCATCTCTCAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPPAPHL*ASLRLG
Trigger: TCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGG...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCCTTCCCGGTGGCACCTaGCCAGGCTTTGCCGAAATC +
Preference number: 2 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPLPGGT*PGFAEI
Trigger: GATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAG...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGCCATTCCTTCCCGGTaGCACCTGCCCAGGCTTTGC +
Preference number: 2 (lower is better)
Translates to: PANAVKAPSATPRPRPASAIPSR*HLPRLC
Trigger: GCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCATCAAGCTGACGGTCTaGCCGGGCGGGCACCAGGAG +
Preference number: 2 (lower is better)
Translates to: APSATPRPRPASRMPFLPIKLTV*PGGHQE
Trigger: CTCCTGGTGCCCGCCCGGCCAGACCGTCAGCTTGAT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGTGAACATGTCTGACTaGGTCTGGGCTGAGGGACCT +
Preference number: 2 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPVNMSD*VWAEGP
Trigger: AGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCAC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCTTGCCCAGGCTGGAGTaGAGTGTCATGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPLPRLE*SVMISA
Trigger: AGCCGAGATCATGACACTGCACTCCAGCCTGGGCAA...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCTAGGGGTTCCCTGCTaGCACCATGTCCACAGAGGA +
Preference number: 2 (lower is better)
Translates to: PANAVKAPSATPRPRPASLGVPC*HHVHRG
Trigger: TCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAG...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGAGGCCTGGTCCCAGTaGCCCCTCTCTCTAGGGGTT +
Preference number: 2 (lower is better)
Translates to: APSATPRPRPASRMPFLPEAWSQ*PLSLGV
Trigger: AACCCCTAGAGAGAGGGGCCACTGGGACCAGGCCTC...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCCAGCAGGCACTTCAGTaGCACGTCCCCAGAGGGACA +
Preference number: 2 (lower is better)
Translates to: APSATPRPRPASRMPFLPQQALQ*HVPRGT
Trigger: TGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTG...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCCACCTGCCCAGGCTTTaGCGAAATCGAAGGCAACAA +
Preference number: 2 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPHLPRL*RNRRQQ
Trigger: TTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTG...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCTGCTGTCTGCTCCTGTaGCCTGTCAGGCAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: APSATPRPRPASRMPFLPCCLLL*PVRQVQ
Trigger: CTGGACCTGCCTGACAGGCCACAGGAGCAGACAGCA...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTAAGCCTGAGGGACCCTaGCTCCCCTTGAAGAATTTC +
Preference number: 2 (lower is better)
Translates to: PANAVKAPSATPRPRPASKPEGP*LPLKNF
Trigger: GAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCCTAGGGGTTCCCTGCTaGCACCATGTCCACAGAGGA +
Preference number: 2 (lower is better)
Translates to: APSATPRPRPASRMPFLPLGVPC*HHVHRG
Trigger: TCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAG...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGAACTGGGAGATTCTaGAGATGGGCCGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: APSATPRPRPASRMPFLPGTGRF*RWAEVR
Trigger: CCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCC...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTAGCTGGGATTACAGATaGATGCCATTGCACCCCGAT +
Preference number: 2 (lower is better)
Translates to: PANAVKAPSATPRPRPASSWDYR*MPLHPD
Trigger: ATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCTACAGCAAGACAGTGTaGCTTTATCCCAGATCCCTG +
Preference number: 2 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPYSKTV*LYPRSL
Trigger: CAGGGATCTGGGATAAAGCCACACTGTCTTGCTGTA...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp GAAAGGAGACAGTCAAGATGGAAGCAAGCCCTGGCCGGGCTGCTGGGGAGCGAGCTGCAGGGCACGCCTTaGAGGACGCGACCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: ERRQSRWKQALAGLLGSELQGTP*RTRPWG
Trigger: GCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAG...CTCGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATCTTGACTGTCTCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR CAA 90 bp CTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTaGGAGGACGCGACCCTGGGGCAGATATGGCAGCTGAGCAATAAC +
Preference number: 2 (lower is better)
Translates to: LPAHPSEQPASAGHA*EDATLGQIWQLSNN
Trigger: GTTATTGCTCAGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR-3UTR TCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTGCCTGCCGGCTCCTCTaGTGTCCCAAGGGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFACRLL*CPKGLL
Trigger: CAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGC...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTAGAGTGGAAAGAGTGTaGCGGAGGCCCGGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFRVERV*RRPGLG
Trigger: CCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCT...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGTGCTGTCTGCTCCTGTaGCCTGTCAGGCAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: GGGLKSACPAATCLGGGGCCLLL*PVRQVQ
Trigger: CTGGACCTGCCTGACAGGCCACAGGAGCAGACAGCA...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGGACCACAGGACAGGGTaGAGGACTGTCCCAGGAGTC +
Preference number: 2 (lower is better)
Translates to: GGGLKSACPAATCLGGGGDHRTG*RTVPGV
Trigger: GACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTC...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCAACCCCAACACCTCTaGCGAAGCATGTTTGTTATA +
Preference number: 2 (lower is better)
Translates to: PANAVKAPSATPRPRPASQPQHL*RSMFVI
Trigger: TATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTG...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGAAGAAAGGCTCAGGTaGAAAGTTCCTGGAATTTTC +
Preference number: 2 (lower is better)
Translates to: PANAVKAPSATPRPRPASEERLR*KVPGIF
Trigger: GAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCCCCAGCCACAAGTTCTaGCTTAAAGTCAGAACAGGA +
Preference number: 2 (lower is better)
Translates to: APSATPRPRPASRMPFLPPSHKF*LKVRTG
Trigger: TCCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGG...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTGAGCATCTCTCAGGCTaGGAAAGGGCAAAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFEHLSG*ERAKGH
Trigger: GTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTC...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGCCTGCCGGCTCCTCTaGTGTCCCAAGGGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPACRLL*CPKGLL
Trigger: CAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCCAACCCCAACACCTCTaGCGAAGCATGTTTGTTATA +
Preference number: 2 (lower is better)
Translates to: APSATPRPRPASRMPFLPQPQHL*RSMFVI
Trigger: TATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTG...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTAGGACTCGGCAGCTGTaGAGGAACTGGGAGATTCTG +
Preference number: 2 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFRTRQL*RNWEIL
Trigger: CAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCT...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGCACACCCTTCTGACTaGAGCATTTCTCAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: APSATPRPRPASRMPFLPAHPSD*SISQKK
Trigger: TTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGC...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCACTTGGGTGTGCTGTCTaGTCCTGTGGCCTGTCAGGC +
Preference number: 2 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPLGCAV*SCGLSG
Trigger: GCCTGACAGGCCACAGGAGCAGACAGCACACCCAAG...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CAA 90 bp ACATCCCAGGCGATCGTGTGGCCTCCAGGAGCCCAGAGCAGGAAGTaGAGGAGAAGGTGCCTGATCAGCTGTTGTGCAGGAGCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: TSQAIVWPPGAQSRK*RRRCLISCCAGALR
Trigger: CCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTCTGGGCTCCTGGAGGCCACACGATCGCCTGGGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR GCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCAATCCAGCAAAACTTTaGTCATACCTCAAAACGGAG +
Preference number: 2 (lower is better)
Translates to: APSATPRPRPASRMPFLPNPAKL*SYLKTE
Trigger: CTCCGTTTTGAGGTATGAGCAAAGTTTTGCTGGATT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGTTAGCAAATACAGAGTaGAAAGAGTGTGCCGGAGGC +
Preference number: 2 (lower is better)
Translates to: GGGLKSACPAATCLGGGGLANTE*KECAGG
Trigger: GCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAA...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CAA 90 bp CAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTaGCCGAAATCGAAGGCAACAAGAGGGGGAGGTGGGCTTAAGAGT +
Preference number: 2 (lower is better)
Translates to: QHLGCHSFPVAPAQA*PKSKATRGGGGLKS
Trigger: ACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCCCTCCACCGCACCCGTaGGAGGACTCGGCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTPPPHP*EDSAAV
Trigger: CACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGG...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCACGCCTTGCCATCCCTaGCTCCCTGCGGCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTTPCHP*LPAAAP
Trigger: AGGGGCAGCCGCAGGGAGGCAGGGATGGCAAGGCGT...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp GAAAGGAGACAGTCAAGATGGAAGCAAGCCCTGGCCGGGCTGCTGGGGAGCGAGACCCTGGGGCAGATATaGCAGCTGAGCAATAACAGA +
Preference number: 2 (lower is better)
Translates to: ERRQSRWKQALAGLLGSETLGQI*QLSNNR
Trigger: TCTGTTATTGCTCAGCTGCCATATCTGCCCCAGGGT...CTCGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATCTTGACTGTCTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR-3UTR TCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGACCCTGACTCCCCTTaGAGAATTTCTCCATACAGC +
Preference number: 2 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPDPDSP*RISPYS
Trigger: GCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCACACTTACTCCACAAATaGGTGGCCACAGGTCATCAC +
Preference number: 2 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPHLLHK*VATGHH
Trigger: GTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTG...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAATCCAGCAAAACTTTaGTCATACCTCAAAACGGAG +
Preference number: 2 (lower is better)
Translates to: GGGLKSACPAATCLGGGGNPAKL*SYLKTE
Trigger: CTCCGTTTTGAGGTATGAGCAAAGTTTTGCTGGATT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCAAGCCCTGGCCGGGCTaGTGGGGAGCGAGACAGGGC +
Preference number: 2 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLKPWPG*WGARQG
Trigger: GCCCTGTCTCGCTCCCCAGCAGCCCGGCCAGGGCTT...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR-3UTR GCA 90 bp AGGAAGTTGAGGAGAAGGTGCCTGATCAGCTGTTGTGCAGGAGCTCTGAGGTCTGCTGCTTCTGGACATTaGCAGGAGGTGGCCCAGCAC +
Preference number: 2 (lower is better)
Translates to: RKLRRRCLISCCAGALRSAASGH*QEVAQH
Trigger: GTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGC...AGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR CCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCATACTCCACAAATGCGTaGCCACAGGTCATCACCTGT +
Preference number: 2 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPYSTNA*PQVITC
Trigger: ACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTA...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAACCGGAGGCCCGGGCTTaGGTGTGCTGTCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKPEARA*VCCLLL
Trigger: CAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGG...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GTATGTTGCTCAGGCTGCTGTGGAGCTCCTGAGCTCAAGGGCAATGTTCACACCCTTCTACCTCCTCAATaGCAGGAGCCCCCTCACAAG +
Preference number: 2 (lower is better)
Translates to: VCCSGCCGAPELKGNVHTLLPPQ*QEPPHK
Trigger: CTTGTGAGGGGGCTCCTGGCATTGAGGAGGTAGAAG...GGTGTGAACATTGCCCTTGAGCTCAGGAGCTCCACAGCAGCCTGAGCAACATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649519.1
3UTR-3UTR GCA 90 bp AGGAAGTTGAGGAGAAGGTGCCTGATCAGCTGTTGTGCAGGAGCTCTGAGGTCTGGGCTGAGAGGCTGCTaGTTCTGGACATTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: RKLRRRCLISCCAGALRSGLRGC*FWTLPG
Trigger: TCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCC...AGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR CCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAATCAAGCTGACGGTCTaGCCGGGCGGGCACCAGGAG +
Preference number: 2 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKIKLTV*PGGHQE
Trigger: CTCCTGGTGCCCGCCCGGCCAGACCGTCAGCTTGAT...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTATGTGCAGCTTGACTTaGGTAAAAACTAGAAACCTG +
Preference number: 2 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFMCSLT*VKTRNL
Trigger: CAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACAT...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCCCAGCTCCCCACCTTTaGGCATCTCTCAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTPAPHL*ASLRLG
Trigger: TCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGG...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCACACTTACTCCACAAATaGGTGGCCACAGGTCATCAC +
Preference number: 2 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPHLLHK*VATGHH
Trigger: GTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTG...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCGTGGCCAGGCTCTGCTaGCGGCACACCCCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLVARLC*RHTPQN
Trigger: GTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCAC...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR-3UTR CCA 90 bp AAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCTTGATGGAAGCAAGCCCTaGCCGGGCTGCTGGGGAGCG +
Preference number: 2 (lower is better)
Translates to: KCQSQEKQGSIQNEPCPLDGSKP*PGCWGA
Trigger: CGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATC...AAGAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR-3UTR CCA 90 bp AGGAAGTTGAGGAGAAGGTGCCTGATCAGCTGTTGTGCAGGAGCTCTGAGGTCTCAACAACCCGGAATATaGCAGGGTGGCAGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: RKLRRRCLISCCAGALRSQQPGI*QGGRLL
Trigger: AAGCAGCCTGCCACCCTGCCATATTCCGGGTTGTTG...AGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR TCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGAAGAAAGGCTCAGGTaGAAAGTTCCTGGAATTTTC +
Preference number: 2 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPEERLR*KVPGIF
Trigger: GAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp GCAATGTTCACACCTCTGCCTCTCAAGTATGCACTCTGTGGGTGGGGCCCTAGATTGGCATTTTGGGCCTaGCAATTCCTTGTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: AMFTPLPLKYALCGWGPRLAFWA*QFLVAG
Trigger: CCCTGCAACAAGGAATTGTCAGGCCCAAAATGCCAA...TCTAGGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGAGGTGTGAACATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649519.1
3UTR-3UTR GCA 90 bp GTATGTTGCTCAGGCTGCTGTGGAGCTCCTGAGCTCAAGGGCAATGTTCACACCGGAGACTTGTGTGGCTaGTACAGAAACAGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: VCCSGCCGAPELKGNVHTGDLCG*YRNSPG
Trigger: TCCTGGACTGTTTCTGTAGCAGCCACACAAGTCTCC...GGTGTGAACATTGCCCTTGAGCTCAGGAGCTCCACAGCAGCCTGAGCAACATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
3UTR-3UTR CCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTACACACAAATCAAAATaGACAAAAGCAAGTCTTGAC +
Preference number: 2 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFTHKSK*TKASLD
Trigger: GTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGT...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCGTGAACATGTCTGACTaGGTCTGGGCTGAGGGACCT +
Preference number: 2 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTVNMSD*VWAEGP
Trigger: AGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCAC...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCTTGCCCAGGCTGGAGTaGAGTGTCATGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTLPRLE*SVMISA
Trigger: AGCCGAGATCATGACACTGCACTCCAGCCTGGGCAA...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCGAGTCACAGCTTCCATaGCCCAGCCACAAGTTCTGG +
Preference number: 2 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTESQLP*PSHKFW
Trigger: CCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTC...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp TGCCACCATCTCAGCCCATCCTCCGAAGTGAATGAACAGGAACCAGCTCTCAAAAGCCTCAAAGAACTCTaGCTGGAGGATTTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: CHHLSPSSEVNEQEPALKSLKEL*LEDFLR
Trigger: CCTCAGGAAATCCTCCAGCCAGAGTTCTTTGAGGCT...TTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR CAA 90 bp GCTGAGGGACCTGGCTCTGCATTTTGTAAAATAGATACTAGCAGATaGTCCCAAGATGTGTACAGCTCATTCTCACAGCCCAGCGAGGGC +
Preference number: 2 (lower is better)
Translates to: AEGPGSAFCKIDTSR*SQDVYSSFSQPSEG
Trigger: GCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCAGAGCCAGGTCCCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp CCCGAGGGATATCTTGAGGGTCTTGCAGCAGCACCATGGCAAGAGATGGAGAAGGGAGCCATTCGCCTTTaGGTGTTAAATCCATTAAGA +
Preference number: 2 (lower is better)
Translates to: PEGYLEGLAAAPWQEMEKGAIRL*VLNPLR
Trigger: TCTTAATGGATTTAACACTCAAAGGCGAATGGCTCC...CTTCTCCATCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR CCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCTACTCCACAAATGCGTaGCCACAGGTCATCACCTGT +
Preference number: 2 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTYSTNA*PQVITC
Trigger: ACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTA...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGACCCTGACTCCCCTTaGAGAATTTCTCCATACAGC +
Preference number: 2 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKDPDSP*RISPYS
Trigger: GCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCAACTCCAGTGAAGCATaGAGCTCCTTTTTCAACCCC +
Preference number: 2 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTNSSEA*SSFFNP
Trigger: GGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTT...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp AGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGCTTGCTTTCTCGGAGACTTGTGTGGCTaGTACAGAAACAGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: SVRKVGLECKPQLLACFLGDLCG*YRNSPG
Trigger: TCCTGGACTGTTTCTGTAGCAGCCACACAAGTCTCC...GAGAAAGCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR CCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCTACAGCAAGACAGTGTaGCTTTATCCCAGATCCCTG +
Preference number: 2 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTYSKTV*LYPRSL
Trigger: CAGGGATCTGGGATAAAGCCACACTGTCTTGCTGTA...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp TCTGTCAGGGTAATAAGTGGGACACAAACTCGTGACAGGGACGCCACTCGCTCGATAGTAATCTATAGGTaGATACCCAAGACCTTGAGT +
Preference number: 2 (lower is better)
Translates to: SVRVISGTQTRDRDATRSIVIYR*IPKTLS
Trigger: ACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT...CGAGCGAGTGGCGTCCCTGTCACGAGTTTGTGTCCCACTTATTACCCTGACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR CCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAATTAGCAAATACAGAGTaGAAAGAGTGTGCCGGAGGC +
Preference number: 2 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKLANTE*KECAGG
Trigger: GCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAA...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCTCCCACCCAGGCCTTTaGTTTAGTAATTATCAAGCT +
Preference number: 2 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTSHPGL*FSNYQA
Trigger: AGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGA...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAAGCCTCTTGAATAGCTaGGATTACAGATGCATGCCA +
Preference number: 2 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKSLLNS*DYRCMP
Trigger: TGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCT...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR TCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGGACACAAGGGAAGCCTaGGGGACCCTGACTCCCCTT +
Preference number: 2 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLDTREA*GTLTPL
Trigger: AAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTC...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR GCA 90 bp AGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCGGAGACTTGTGTGGCTaGTACAGAAACAGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: RIVIYRCIPKTLSEKSNFGDLCG*YRNSPG
Trigger: TCCTGGACTGTTTCTGTAGCAGCCACACAAGTCTCC...GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
3UTR-3UTR GCA 90 bp ACACACACAGGGATTTATTATAAGGAATCAGCTAACACCATTACAGTAGCCAGCACACAAGAGAGCAAATaGCCAGATAACCAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: THTGIYYKESANTITVASTQESK*PDNQES
Trigger: ACTCTCCTGGTTATCTGGGCATTTGCTCTCTTGTGT...GCTGGCTACTGTAATGGTGTTAGCTGATTCCTTATAATAAATCCCTGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649872.1
3UTR-3UTR GCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGAGCTGGGATTACAGATaGATGCCATTGCACCCCGAT +
Preference number: 2 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLSWDYR*MPLHPD
Trigger: ATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCT...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCGGAGGCCCGGGCTaGGGTGTGCTGTCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPAGGPG*GVLSAP
Trigger: AGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGCCGGAGGCCCGGGCTaGGGTGTGCTGTCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: PANAVKAPSATPRPRPASAGGPG*GVLSAP
Trigger: AGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCCGGCCGCCACCTGTCTaGGAGGTGGAGGGAATGGCC +
Preference number: 3 (lower is better)
Translates to: APSATPRPRPASRMPFLPRPPPV*EVEGMA
Trigger: GGCCATTCCCTCCACCTCCAAGACAGGTGGCGGCCG...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp GGGGAGCGAGACAGGGCCCTGGCTGTGGCCAGGCTCTaGTGCCGGCACACCCCTCAGAACAGCCCGCCTCTG +
Preference number: 3 (lower is better)
Translates to: GERDRALAVARL*CRHTPQNSPPL
Trigger: CAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGCCAGGGCCCTGTCTCGCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR GCA 72 bp CCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATaGCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTG +
Preference number: 3 (lower is better)
Translates to: PRPRRVPAQHLG*HSFPVAPAQAL
Trigger: CAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp CCAGAGGGACAGTCCTCCCACCCAGGAACCCCTGGCTaGCCAGAAAGCACCACCGGCAAGGCCGCCTCCACC +
Preference number: 3 (lower is better)
Translates to: PEGQSSHPGTPG*PESTTGKAAST
Trigger: GGTGGAGGCGGCCTTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 72 bp GACAGTCAAGATGGAAGCAAGCCCTGGCCGGGCTGCTaGGGAGCGAGACAGGGCCCTGGCTGTGGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: DSQDGSKPWPGC*GARQGPGCGQA
Trigger: AGCCTGGCCACAGCCAGGGCCCTGTCTCGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATCTTGACTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR TCA 72 bp CGCCTCCACCGCACCCGTGAGAGGACTCGGCAGCTGTaGAGGAACTGGGAGATTCTGCAGATGGGCCGAGGT +
Preference number: 3 (lower is better)
Translates to: RLHRTRERTRQL*RNWEILQMGRG
Trigger: ACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR TCA 72 bp AAAGCACCACCGGCAAGGCCGCCTCCACCGCACCCGTaGGAGGACTCGGCAGCTGTGAAGGAACTGGGAGAT +
Preference number: 3 (lower is better)
Translates to: KAPPARPPPPHP*EDSAAVKELGD
Trigger: ATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTTGCCGGTGGTGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTATAGATACTAGCAGATaGTCCCAAGATGTGTACAGC +
Preference number: 3 (lower is better)
Translates to: PANAVKAPSATPRPRPASIDTSR*SQDVYS
Trigger: GCTGTACACATCTTGGGACAATCTGCTAGTATCTAT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTTCTGACGAAGCATGTTaGTTATATGAAGGCAAGGAT +
Preference number: 3 (lower is better)
Translates to: PANAVKAPSATPRPRPASSDEAC*LYEGKD
Trigger: ATCCTTGCCTTCATATAACAAACATGCTTCGTCAGA...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp AAGGCAACAAGAGGGGGAGGTGGGCTTAAGAGTGCCTaGCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAAT +
Preference number: 3 (lower is better)
Translates to: KATRGGGGLKSA*PAATCLGGGGN
Trigger: ATTCCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp GATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTaGCGAAATCGAAGGCAACAAGAGGGGGAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: DAIPSRWHLPRL*RNRRQQEGEVG
Trigger: GCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp CTGAGGTCTGTGTCTGTGCCCTGTCCTGCTACCGTCTaGAGGTCCTGGGCTGAGAGGCTGCTGCTTCTGGAC +
Preference number: 3 (lower is better)
Translates to: LRSVSVPCPATV*RSWAERLLLLD
Trigger: GTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCTGCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR CCA 72 bp TCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTaGCCACAGGTCATCACCTGTCCTGTGGCCCTGGCG +
Preference number: 3 (lower is better)
Translates to: SQPSEGTYSTNA*PQVITCPVALA
Trigger: CGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 72 bp ATACAGAGTGGAAAGAGTGTGCCGGAGGCCCGGGCTTaGGTGTGCTGTCTGCTCCTGTGGCCTGTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: IQSGKSVPEARA*VCCLLLWPVRQ
Trigger: CTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 72 bp TCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTaGCACCTGCCCAGGCTTTGCCGAAATCGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: SPPSISDAIPSR*HLPRLCRNRRQ
Trigger: TTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 72 bp GGCCGTAGTAGAAGGCCAAGAGCCACAGCAGGGCCGTaGGGGGTTCGGCTGCCGACATCAGTAATTGCTCTG +
Preference number: 3 (lower is better)
Translates to: GRSRRPRATAGP*GVRLPTSVIAL
Trigger: CAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR CCA 72 bp GTGTCTGTGCCCTGTCCTGCTACCGTCTGCAGGTCCTaGGCTGAGAGGCTGCTGCTTCTGGACATTGCCAGG +
Preference number: 3 (lower is better)
Translates to: VSVPCPATVCRS*AERLLLLDIAR
Trigger: CCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCTGCAGACGGTAGCAGGACAGGGCACAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR CCA 72 bp AGAGGCCAACCCTGTACACAGGACCACAGGACAGGGTaGAGGACTGTCCCAGGAGTCCCTCCACAACAGGAG +
Preference number: 3 (lower is better)
Translates to: RGQPCTQDHRTG*RTVPGVPPQQE
Trigger: CTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGTGTCCCAAGGGCCTTTaGGTAGCAGTTAGCATCATT +
Preference number: 3 (lower is better)
Translates to: GGGLKSACPAATCLGGGGCPKGL*VAVSII
Trigger: AATGATGCTAACTGCTACCAAAAGGCCCTTGGGACA...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCTCTGACGAAGCATGTTaGTTATATGAAGGCAAGGAT +
Preference number: 3 (lower is better)
Translates to: APSATPRPRPASRMPFLPSDEAC*LYEGKD
Trigger: ATCCTTGCCTTCATATAACAAACATGCTTCGTCAGA...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp CCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTaGCCAGGCTTTGCCGAAATCGAAGGCAACAAGAGG +
Preference number: 3 (lower is better)
Translates to: PASRMPFLPGGT*PGFAEIEGNKR
Trigger: CCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGGGACAAAAGCAAGTCTaGACTCACTTGACAAACAGA +
Preference number: 3 (lower is better)
Translates to: GGGLKSACPAATCLGGGGGQKQV*THLTNR
Trigger: TCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCC...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCCGGCCGCCACCTGTCTaGGAGGTGGAGGGAATGGCC +
Preference number: 3 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTRPPPV*EVEGMA
Trigger: GGCCATTCCCTCCACCTCCAAGACAGGTGGCGGCCG...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR TCA 72 bp GCTCTGCCACCATCTCAGCCCATCCTCCGAAGTGAATaGACAGGAACCAGCTCTCAAAGGGACCTCCGCAGG +
Preference number: 3 (lower is better)
Translates to: ALPPSQPILRSE*TGTSSQRDLRR
Trigger: CCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR GCA 72 bp ATTCTCACAGCCCAGCGAGGGCACTTACTCCACAAATaGGTGGCCACAGGTCATCACCTGTCCTGTGGCCCT +
Preference number: 3 (lower is better)
Translates to: ILTAQRGHLLHK*VATGHHLSCGP
Trigger: AGGGCCACAGGACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp CCTCCAGGAGCCCAGAGCAGGAAGTTGAGGAGAAGGTaGCTGATCAGCTGTTGTGCAGGAGCTCTGAGGTCT +
Preference number: 3 (lower is better)
Translates to: PPGAQSRKLRRR*LISCCAGALRS
Trigger: AGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTCTGGGCTCCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR CAA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTGGACAAAAGCAAGTCTaGACTCACTTGACAAACAGA +
Preference number: 3 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFGQKQV*THLTNR
Trigger: TCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCC...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGGTGGATCTATTAGCATaGCCACATACCAAAATAAGG +
Preference number: 3 (lower is better)
Translates to: GGGLKSACPAATCLGGGGVDLLA*PHTKIR
Trigger: CCTTATTTTGGTATGTGGCAATGCTAATAGATCCAC...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp GCCACCATTGGCATTTTGGGCCTGACAATTCCTTGTTaGAGGGGCCTGACCTGTGCATTCCCGCCTTCTACC +
Preference number: 3 (lower is better)
Translates to: ATIGILGLTIPC*RGLTCAFPPST
Trigger: GGTAGAAGGCGGGAATGCACAGGTCAGGCCCCTGCAACAAGGAATTGTCAGGCCCAAAATGCCAATGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649519.1
3UTR GCA 72 bp CAGGAAGTTGAGGAGAAGGTGCCTGATCAGCTGTTGTaGAGGAGCTCTGAGGTCTGTGTCTGTGCCCTGTCC +
Preference number: 3 (lower is better)
Translates to: QEVEEKVPDQLL*RSSEVCVCALS
Trigger: GGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR CCA 72 bp CAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTaGCCGGGCGGGCACCAGGAGTACCGAAGGCTCACT +
Preference number: 3 (lower is better)
Translates to: QAFALVIIKLTV*PGGHQEYRRLT
Trigger: AGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR TCA 72 bp TGGAACACATCCTCTACCTTCGCCTGCCGGCTCCTCTaGTGTCCCAAGGGCCTTTTGGTAGCAGTTAGCATC +
Preference number: 3 (lower is better)
Translates to: WNTSSTFACRLL*CPKGLLVAVSI
Trigger: GATGCTAACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR TCA 72 bp CTACCTCCTCAATGCCAGGAGCCCCCTCACAAGTTGTaGCAACCACACGTCCCCAGACATTGCTCAAATCCC +
Preference number: 3 (lower is better)
Translates to: LPPQCQEPPHKL*QPHVPRHCSNP
Trigger: GGGATTTGAGCAATGTCTGGGGACGTGTGGTTGTCACAACTTGTGAGGGGGCTCCTGGCATTGAGGAGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649519.1
3UTR TCA 72 bp GCTCTCAGTATGTTGCTCAGGCTGCTGTGGAGCTCCTaGGCTCAAGGGCAATGTTCACACCTCTGCCTCTCA +
Preference number: 3 (lower is better)
Translates to: ALSMLLRLLWSS*AQGQCSHLCLS
Trigger: TGAGAGGCAGAGGTGTGAACATTGCCCTTGAGCTCAGGAGCTCCACAGCAGCCTGAGCAACATACTGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
3UTR TCA 72 bp GCTGGAGGATTTCCTGAGGTTCACGTCCATGACAGATaGGGAGAGCCTCCACCAGGGGGTCAACATCTGTCA +
Preference number: 3 (lower is better)
Translates to: AGGFPEVHVHDR*GEPPPGGQHLS
Trigger: TGACAGATGTTGACCCCCTGGTGGAGGCTCTCCTCATCTGTCATGGACGTGAACCTCAGGAAATCCTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR CCA 72 bp TCCACAGATGTCACGGAGTCCAGGGGAATAACAGCCTaGTTGGAGGGGCGCTCTCCGCCTCTTCTGTATTTT +
Preference number: 3 (lower is better)
Translates to: STDVTESRGITA*LEGRSPPLLYF
Trigger: AAAATACAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR TCA 72 bp AATTGCTCTGCCACCATCTCAGCCCATCCTCCGAAGTaGATGAACAGGAACCAGCTCTCAAAGGGACCTCCG +
Preference number: 3 (lower is better)
Translates to: NCSATISAHPPK*MNRNQLSKGPP
Trigger: CGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCAGAGCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR GCA 72 bp TTAGCATCATTTAGCAAATACAGAGTGGAAAGAGTGTaGCGGAGGCCCGGGCTTGGGTGTGCTGTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: LASFSKYRVERV*RRPGLGCAVCS
Trigger: GGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CCA 72 bp TTCACACCTCTGCCTCTCAAGTATGCACTCTGTGGGTaGGGCCCTAGAATCTGCTTCTCCAACAGGAGCACA +
Preference number: 3 (lower is better)
Translates to: FTPLPLKYALCG*GPRICFSNRST
Trigger: TGTGCTCCTGTTGGAGAAGCAGATTCTAGGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGAGGTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
3UTR-3UTR CAA 90 bp GCAATGTTCACACCTCTGCCTCTCAAGTATGCACTCTGTGGGTGGGGCCCTAGAGCCACCATTGGCATTTaGGGCCTGACAATTCCTTGT +
Preference number: 3 (lower is better)
Translates to: AMFTPLPLKYALCGWGPRATIGI*GLTIPC
Trigger: ACAAGGAATTGTCAGGCCCAAAATGCCAATGGTGGC...TCTAGGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGAGGTGTGAACATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649519.1
3UTR-3UTR CAA 90 bp TGCCACCATCTCAGCCCATCCTCCGAAGTGAATGAACAGGAACCAGCTCTCAAAGCAAACCGCAGCTGCTaGCTTGCTTTCTCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: CHHLSPSSEVNEQEPALKANRSC*LAFSRA
Trigger: AGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGTTTGC...TTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR CAA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGTGGATCTATTAGCATaGCCACATACCAAAATAAGG +
Preference number: 3 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPVDLLA*PHTKIR
Trigger: CCTTATTTTGGTATGTGGCAATGCTAATAGATCCAC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp TGCCACCATCTCAGCCCATCCTCCGAAGTGAATGAACAGGAACCAGCTCTCAAAACCGCAGCTGCTTGCTaGCTTTCTCCAGAGCTTCTA +
Preference number: 3 (lower is better)
Translates to: CHHLSPSSEVNEQEPALKTAAAC*LSPELL
Trigger: TAGAAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGT...TTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR CAA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAATAGATACTAGCAGATaGTCCCAAGATGTGTACAGC +
Preference number: 3 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPIDTSR*SQDVYS
Trigger: GCTGTACACATCTTGGGACAATCTGCTAGTATCTAT...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR-3UTR CAA 90 bp GAGGAGAGCCTCCACCAGGGGGTCAACATCTGTCAGGGTAATAAGTGGGACACATGCATACCCAAGACCTaGAGTGAAAAGAGCAACTTC +
Preference number: 3 (lower is better)
Translates to: EESLHQGVNICQGNKWDTCIPKT*SEKSNF
Trigger: GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCA...TGTGTCCCACTTATTACCCTGACAGATGTTGACCCCCTGGTGGAGGCTCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR TCA 72 bp CGCAGGACCCATGAGTCTGGTCTTCAACTGCTTCTCTaGGCAGTTCAGAAATATGCTTCAGTGTCTGGAGCC +
Preference number: 3 (lower is better)
Translates to: RRTHESGLQLLL*AVQKYASVSGA
Trigger: GGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTCCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR GCA 72 bp GGGACCTCCGCAGGACCCATGAGTCTGGTCTTCAACTaGTTCTCTGAGCAGTTCAGAAATATGCTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: GTSAGPMSLVFN*FSEQFRNMLQC
Trigger: ACACTGAAGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR CCA 72 bp CCCGAGGGATATCTTGAGGGTCTTGCAGCAGCACCATaGCAAGAGATGGAGAAGTGTAAGGAAAGTAGGTCT +
Preference number: 3 (lower is better)
Translates to: PEGYLEGLAAAP*QEMEKCKESRS
Trigger: AGACCTACTTTCCTTACACTTCTCCATCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR TCA 72 bp GAAGGCTCACTTGAGTCATTAGTGAACATGTCTGACTaGGTCTGGGCTGAGGGACCTGGCTCTGCATTTTGT +
Preference number: 3 (lower is better)
Translates to: EGSLESLVNMSD*VWAEGPGSAFC
Trigger: ACAAAATGCAGAGCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp TGGTCTTCAACTGCTTCTCTGAGCAGTTCAGAAATATaGTTCAGTGTCTGGAGCCAGTGTCCCCGAGGGATA +
Preference number: 3 (lower is better)
Translates to: WSSTASLSSSEI*FSVWSQCPRGI
Trigger: TATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR CCA 72 bp CAGCAAAATGGCCTCGTTTACAGCCTCAAAGAACTCTaGCTGGAGGATTTCCTGAGGTTCACGTCCATGACA +
Preference number: 3 (lower is better)
Translates to: QQNGLVYSLKEL*LEDFLRFTSMT
Trigger: TGTCATGGACGTGAACCTCAGGAAATCCTCCAGCCAGAGTTCTTTGAGGCTGTAAACGAGGCCATTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR-3UTR CAA 90 bp TGCCACCATCTCAGCCCATCCTCCGAAGTGAATGAACAGGAACCAGCTCTCAAAGGGAGCCATTCGCCTTaGAGTGTTAAATCCATTAAG +
Preference number: 3 (lower is better)
Translates to: CHHLSPSSEVNEQEPALKGSHSP*SVKSIK
Trigger: CTTAATGGATTTAACACTCAAAGGCGAATGGCTCCC...TTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR TCA 72 bp TTCTCCAGAGCTTCTACAAAGCACTGCGTAAACACCTaGATAGTGGCTATGATTTCCAGGGCCCCATCGGTT +
Preference number: 3 (lower is better)
Translates to: FSRASTKHCVNT*IVAMISRAPSV
Trigger: AACCGATGGGGCCCTGGAAATCATAGCCACTATTCAGGTGTTTACGCAGTGCTTTGTAGAAGCTCTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR TCA 72 bp TGGCAAGAGATGGAGAAGTGTAAGGAAAGTAGGTCTTaGGTGCAAACCGCAGCTGCTTGCTTGCTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: WQEMEKCKESRS*VQTAAACLLSP
Trigger: TGGAGAAAGCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATCTCTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR TCA 72 bp TCGCAGCTCTTTAAGGAGCTCTCGGGCCAGTTTTTCTaGTCTAGGGCTTTCAATGCCAAGACGATTCCATCT +
Preference number: 3 (lower is better)
Translates to: SQLFKELSGQFF*SRAFNAKTIPS
Trigger: AGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR GCA 72 bp GTAAAAACTAGAAACCTGTTCTCCCACCCAGGCCTTTaGTTTAGTAATTATCAAGCTGACGGTCTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: VKTRNLFSHPGL*FSNYQADGLAG
Trigger: CCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp AAGAGATGGAGAAGTGTAAGGAAAGTAGGTCTTGAGTaGAAACCGCAGCTGCTTGCTTGCTTTCTCCAGAGC +
Preference number: 3 (lower is better)
Translates to: KRWRSVRKVGLE*KPQLLACFLQS
Trigger: GCTCTGGAGAAAGCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR TCA 72 bp GATTCCATCTGTACAAGGTCTGGTCAAGAAAGCCAATaGTCTCGTGAGTTATCTCAGCAGTGTGAGCCATCA +
Preference number: 3 (lower is better)
Translates to: DSICTRSGQESQ*SRELSQQCEPS
Trigger: TGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTTGACCAGACCTTGTACAGATGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
3UTR GCA 72 bp TGCCACCAAAATACTTTACCAGCACACCCTTCTGACTaGAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAAG +
Preference number: 3 (lower is better)
Translates to: CHQNTLPAHPSD*SISQKKGSGEK
Trigger: CTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR GCA 72 bp CATATTTTTAAGCAAACCAGGATAGTAATCTATAGGTaGATACCCAAGACCTTGAGTGAAAAGAGCAACTTC +
Preference number: 3 (lower is better)
Translates to: HIFKQTRIVIYR*IPKTLSEKSNF
Trigger: GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCTGGTTTGCTTAAAAATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCACAGCAGGGCCGTaGGGGGTTCGGCTGCCGACA +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPATAGP*GVRLPT
Trigger: TGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCTCCCAGGCGATCGTGTaGCCTCCAGGAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPSQAIV*PPGAQS
Trigger: GCTCTGGGCTCCTGGAGGCCACACGATCGCCTGGGA...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCATCAAGCTGACGGTCTaGCCGGGCGGGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPIKLTV*PGGHQE
Trigger: CTCCTGGTGCCCGCCCGGCCAGACCGTCAGCTTGAT...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCAGAGTGGAAAGAGTGTaGCGGAGGCCCGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPRVERV*RRPGLG
Trigger: CCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCT...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCCAGGAACCCCTGGCTaGCCAGAAAGCACCACCGGC +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASPGTPG*PESTTG
Trigger: GCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGG...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTATCAAGCTGACGGTCTaGCCGGGCGGGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASIKLTV*PGGHQE
Trigger: CTCCTGGTGCCCGCCCGGCCAGACCGTCAGCTTGAT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGAGGCCTGGTCCCAGTaGCCCCTCTCTCTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPEAWSQ*PLSLGV
Trigger: AACCCCTAGAGAGAGGGGCCACTGGGACCAGGCCTC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGTCTGTGCCCTGTCCTaGTACCGTCTGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPVCALS*YRLQVL
Trigger: CAGGACCTGCAGACGGTAGCAGGACAGGGCACAGAC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATaGCATTCCTTCCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPAQHLG*HSFPVA
Trigger: TGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCCACAACAGGAGGCCTaGTCCCAGTGGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASPQQEA*SQWPLS
Trigger: AGAGAGGGGCCACTGGGACCAGGCCTCCTGTTGTGG...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCTGGAGGTGGAGGGAATaGCCGAGGGGTGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPWRWRE*PRGGSP
Trigger: GGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCA...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACCCTGGCCGGGCTGCTaGGGAGCGAGACAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WPGSAAGTPLRTARLCRAPWPGC*GARQGP
Trigger: AGGGCCCTGTCTCGCTCCCCAGCAGCCCGGCCAGGG...TGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGTGGCCCTGGCGAGCCTaGTCCCTCACGCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGWPWRA*SLTPGT
Trigger: GGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCA...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGCTGCTTCTGGACATTaGCAGGAGGTGGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASAASGH*QEVAQH
Trigger: GTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCCTAGGGGTTCCCTGCTaGCACCATGTCCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPLGVPC*HHVHRG
Trigger: TCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAG...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCTTCCCGGTGGCACCTaGCCAGGCTTTGCCGAAATC +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASLPGGT*PGFAEI
Trigger: GATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAG...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGACCACAGGACAGGGTaGAGGACTGTCCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASDHRTG*RTVPGV
Trigger: GACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCCTCCGCAGGACCCATaGGTCTGGTCTTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASPPQDP*VWSSTA
Trigger: AGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGG...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTTGGCCCTGGCGAGCCTaGTCCCTCACGCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFWPWRA*SLTPGT
Trigger: GGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCA...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTAAGCCCTGGCCGGGCTaGTGGGGAGCGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: RLCRARLGGRDPGADMAAKPWPG*WGARQG
Trigger: GCCCTGTCTCGCTCCCCAGCAGCCCGGCCAGGGCTT...AGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp CGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTGCCACAGCAGGGCCGTaGGGGGTTCGGCTGCCGACA +
Preference number: 4 (lower is better)
Translates to: RLCRARLGGRDPGADMAAATAGP*GVRLPT
Trigger: TGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGC...AGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGAGCATCTCTCAGGCTaGGAAAGGGCAAAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASEHLSG*ERAKGH
Trigger: GTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACGATGGAAGCAAGCCCTaGCCGGGCTGCTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: GTPLRTARLCRARLGGRDDGSKP*PGCWGA
Trigger: CGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATC...GTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCTGGGACACAAACTCGTaGCAGGGACGCCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPWDTNS*QGRHSL
Trigger: GAGCGAGTGGCGTCCCTGTCACGAGTTTGTGTCCCA...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTAGGACTCGGCAGCTGTaGAGGAACTGGGAGATTCTG +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASRTRQL*RNWEIL
Trigger: CAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGCCTCCACCGCACCCGTaGGAGGACTCGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGPPPHP*EDSAAV
Trigger: CACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGG...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCGTCTGTGCTCTCTGCTaGCTCCCATCACGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: PPLQGTPWRTRPWGRYGSVCALC*LPSRGP
Trigger: CGGCCCCCGTGATGGGAGGCAGCAGAGAGCACAGAC...GCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTTTGCCCAGGCTGGAGTaGAGTGTCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASLPRLE*SVMISA
Trigger: AGCCGAGATCATGACACTGCACTCCAGCCTGGGCAA...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGAGTGGCCAGGCTCTGCTaGCGGCACACCCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: AAGTPLRTARLCRARLGGVARLC*RHTPQN
Trigger: GTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCAC...TCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCAACAACCCGGAATATaGCAGGGTGGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASQQPGI*QGGRLL
Trigger: AAGCAGCCTGCCACCCTGCCATATTCCGGGTTGTTG...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGTGGAGGTGGAGGGAATaGCCGAGGGGTGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGWRWRE*PRGGSP
Trigger: GGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCA...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACGCAGCGTCTCGTCTCTaGCCACCTCGGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: GTPLRTARLCRARLGGRDAASRL*PPRWGQ
Trigger: CTGTCCCCACCGAGGTGGCCAGAGACGAGACGCTGC...GTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR CAA 72 bp GTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTaGGAGGTGGAGGGAATGGCCGAGGGGTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VGLRVPARPPPV*EVEGMAEGWLP
Trigger: GGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGAGGCAGACTACAGCTaGCATGGGGAGAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPEADYS*HGERNL
Trigger: AAGATTTCTCTCCCCATGTCAGCTGTAGTCTGCCTC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCAAGGAAAGTAGGTCTTaGGTGCAAACCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPKESRS*VQTAAA
Trigger: AGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTT...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTCCTCCACCGCACCCGTaGGAGGACTCGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFPPPHP*EDSAAV
Trigger: CACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGG...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCACCCTGTCGCACCTCTaGAGACCTTGGTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPTLSHL*RPWSSS
Trigger: GGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCCACTTACTCCACAAATaGGTGGCCACAGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPHLLHK*VATGHH
Trigger: GTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTG...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCTACTCCACAAATGCGTaGCCACAGGTCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPYSTNA*PQVITC
Trigger: ACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTA...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGAGCATCTCTCAGGCTaGGAAAGGGCAAAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPEHLSG*ERAKGH
Trigger: GTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTC...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCCAGTTCCTTCCAGGGTaGCTTCACGCCTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPQFLPG*LHALPS
Trigger: GGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTG...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACTCTGGCCACCTCGGTaGGGACAGGAGAACGCCTCT +
Preference number: 4 (lower is better)
Translates to: AAGTPLRTARLCRARLGGLWPPR*GQENAS
Trigger: AGAGGCGTTCTCCTGTCCCCACCGAGGTGGCCAGAG...TCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR CAA 72 bp CACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTaGGAGGACGCGACCCTGGGGCAGATATGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HPSEQPASAGHA*EDATLGQIWQL
Trigger: CAGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp TGGCTGTGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCTGGGACACAAACTCGTaGCAGGGACGCCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: WLWPGSAAGTPLRTARLCWDTNS*QGRHSL
Trigger: GAGCGAGTGGCGTCCCTGTCACGAGTTTGTGTCCCA...GCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTAAGGAAAGTAGGTCTTaGGTGCAAACCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASKESRS*VQTAAA
Trigger: AGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGTGAACATGTCTGACTaGGTCTGGGCTGAGGGACCT +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPVNMSD*VWAEGP
Trigger: AGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCAC...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGGCCTGCCGGCTCCTCTaGTGTCCCAAGGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGACRLL*CPKGLL
Trigger: CAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGC...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGGCTGTGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCGGTCCTCGCGGGAGCTaGTTCAGCAGTTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: WLWPGSAAGTPLRTARLCGPRGS*FSSLGS
Trigger: ACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACC...GCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTGTCTGTGCTCTCTGCTaGCTCCCATCACGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFVCALC*LPSRGP
Trigger: CGGCCCCCGTGATGGGAGGCAGCAGAGAGCACAGAC...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTAGACAGGTGTCTTGCTaGGTTTCCAAAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASRQVSC*VSKVEA
Trigger: GGCTTCCACTTTGGAAACCCAGCAAGACACCTGTCT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTGCAGGAGAATGGGCTaGCAGCGTCTCGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PPLQGTPWRTRPWGRYGSCRRMG*QRLVSG
Trigger: GCCAGAGACGAGACGCTGCCAGCCCATTCTCCTGCA...GCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTATCCTCCGAAGTGAATaGACAGGAACCAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASILRSE*TGTSSQ
Trigger: TTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGAT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCAAGCCTGAGGGACCCTaGCTCCCCTTGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPKPEGP*LPLKNF
Trigger: GAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGGACACAAGGGAAGCCTaGGGGACCCTGACTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGDTREA*GTLTPL
Trigger: AAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTC...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCCAACCCCAACACCTCTaGCGAAGCATGTTTGTTATA +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPQPQHL*RSMFVI
Trigger: TATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTG...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTATCGGTTTCCAGGAGTaGACACCTGAACATCTCATC +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASIGFQE*TPEHLI
Trigger: GATGAGATGTTCAGGTGTGCACTCCTGGAAACCGAT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCAGCAGTTCAGAAATATaGTTCAGTGTCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPSSSEI*FSVWSQ
Trigger: CTGGCTCCAGACACTGAAGCATATTTCTGAACTGCT...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCAATAGTCTGTGCTCTCTaGTGCCTCCCATCACGGGGG +
Preference number: 4 (lower is better)
Translates to: WPGSAAGTPLRTARLCRAIVCAL*CLPSRG
Trigger: CCCCCGTGATGGGAGGCAGCAGAGAGCACAGACTAT...TGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTAAGTTGAGGAGAAGGTaGCTGATCAGCTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASKLRRR*LISCCA
Trigger: TGCACAACAGCTGATCAGGCACCTTCTCCTCAACTT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAAAGGAGACAGTCAAGATGGAAGCAAGCCCTGGCCGGGCTGCTGGGGAGCGAGGCTGTGGCCAGGCTCTaGTGCCGGCACACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERRQSRWKQALAGLLGSEAVARL*CRHTPQ
Trigger: CTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGC...CTCGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATCTTGACTGTCTCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGCAGCAGTTTGGGCAGTaGCGGAAAGGAAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGQQFGQ*RKGSHR
Trigger: GCGGTGGCTTCCTTTCCGCCACTGCCCAAACTGCTG...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289081.8
CDS-3UTR CCA 90 bp GAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATACAGCAGTTTGGGCAGTaGCGGAAAGGAAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: EQPASAGHALEDATLGQIQQFGQ*RKGSHR
Trigger: GCGGTGGCTTCCTTTCCGCCACTGCCCAAACTGCTG...TATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGACCGTCTGCAGGTCCTaGGCTGAGAGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGTVCRS*AERLLL
Trigger: AAGCAGCAGCCTCTCAGCCCAGGACCTGCAGACGGT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTTACAGCAAGACAGTGTaGCTTTATCCCAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASYSKTV*LYPRSL
Trigger: CAGGGATCTGGGATAAAGCCACACTGTCTTGCTGTA...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGCACCTGTCTTGGAGGTaGAGGGAATGGCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGHLSWR*REWPRG
Trigger: ACCCCTCGGCCATTCCCTCCACCTCCAAGACAGGTG...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCAAGGAGACAGTCAAGATaGAAGCAAGCCCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: WPGSAAGTPLRTARLCRARRQSR*KQALAG
Trigger: CCCGGCCAGGGCTTGCTTCCATCTTGACTGTCTCCT...TGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGCATACCCAAGACCTTaGGTGAAAAGAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASAYPRP*VKRATS
Trigger: AGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTCACGTCCATGACAGATaGGGAGAGCCTCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFHVHDR*GEPPPG
Trigger: CCCTGGTGGAGGCTCTCCTCATCTGTCATGGACGTG...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCCTTCAACTGCTTCTCTaGGCAGTTCAGAAATATGCT +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPLQLLL*AVQKYA
Trigger: AGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAG...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCAGCCCATCCTCCGAAGTaGATGAACAGGAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: WPGSAAGTPLRTARLCRAAHPPK*MNRNQL
Trigger: GAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGC...TGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGGTCAAGAAAGCCAATaGTCTCGTGAGTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASGQESQ*SRELSQ
Trigger: CTGAGATAACTCACGAGATCATTGGCTTTCTTGACC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTGACACAAGGGAAGCCTaGGGGACCCTGACTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFDTREA*GTLTPL
Trigger: AAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTC...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGTCAAGGCTGGGAAGGTaGCGAAGCCAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGSRLGR*RSQRQT
Trigger: AGTCTGCCTCTGGCTTCGGCACCTTCCCAGCCTTGA...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTTCAAGGCTGGGAAGGTaGCGAAGCCAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RLCRARLGGRDPGADMAASRLGR*RSQRQT
Trigger: AGTCTGCCTCTGGCTTCGGCACCTTCCCAGCCTTGA...AGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCAGCTGGGATTACAGATaGATGCCATTGCACCCCGAT +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPSWDYR*MPLHPD
Trigger: ATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCTCTTCTTCAGCAAAATaGCCTCGTTTACAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPSSSAK*PRLQPQ
Trigger: TTGAGGCTGTAAACGAGGCCATTTTGCTGAAGAAGA...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCTTGCTTTTTCAAGGCTaGGAAGGTGCCGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPLLFQG*EGAEAR
Trigger: TCTGGCTTCGGCACCTTCCCAGCCTTGAAAAAGCAA...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAGAGGCTGCTGCTTCTaGACATTGCCAGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGRGCCF*TLPGGG
Trigger: GCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCCATCTGTACAAGGTCTaGTCAAGAAAGCCAATGATC +
Preference number: 4 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPHLYKV*SRKPMI
Trigger: GATCATTGGCTTTCTTGACCAGACCTTGTACAGATG...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTAGGGGAATAACAGCCTaGTTGGAGGGGCGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFRGITA*LEGRSP
Trigger: CGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCT...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTAGATCTACTGAATCTTaGGCCATCTTGGAAAAAGCG +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASRSTES*AILEKA
Trigger: CGCTTTTTCCAAGATGGCTCAAGATTCAGTAGATCT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGGGGTGGCAGGCTGCTTaGGGCAGCGATGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGGWQAA*GSDESF
Trigger: AAAAGATTCATCGCTGCCTCAAGCAGCCTGCCACCC...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATAGGGTGGCAGGCTGCTTaGGGCAGCGATGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: EQPASAGHALEDATLGQIGWQAA*GSDESF
Trigger: AAAAGATTCATCGCTGCCTCAAGCAGCCTGCCACCC...TATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp TGGCTGTGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCGCCGACATCAGTAATTaGTCTGCCACCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WLWPGSAAGTPLRTARLCADISN*SATISA
Trigger: GGCTGAGATGGTGGCAGAGCAATTACTGATGTCGGC...GCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTTCCCACCCAGGCCTTTaGTTTAGTAATTATCAAGCT +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASSHPGL*FSNYQA
Trigger: AGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGA...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCAACTCCAGTGAAGCATaGAGCTCCTTTTTCAACCCC +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPNSSEA*SSFFNP
Trigger: GGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGTCTCTAGGGGTTCCCTaGTGCCACCATGTCCACAGA +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGSLGVP*CHHVHR
Trigger: TCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGA...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTGGCTGGAGATCACCATaGCTGCAGGTTGCCATGACA +
Preference number: 4 (lower is better)
Translates to: RLCRARLGGRDPGADMAAGWRSP*LQVAMT
Trigger: TGTCATGGCAACCTGCAGGCATGGTGATCTCCAGCC...AGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp GCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGAGAAGGGTCTTCGTTTTaGAGGAGAATGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AAGTPLRTARLCRARLGGEGSSF*RRMGWQ
Trigger: CTGCCAGCCCATTCTCCTGCAAAACGAAGACCCTTC...TCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGATATGCTTCAGTGTCTaGAGCCAGTGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGICFSV*SQCPRG
Trigger: CCCTCGGGGACACTGGCTCCAGACACTGAAGCATAT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTATATGCTTCAGTGTCTaGAGCCAGTGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RLCRARLGGRDPGADMAAICFSV*SQCPRG
Trigger: CCCTCGGGGACACTGGCTCCAGACACTGAAGCATAT...AGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAGCCACAGCAGGGCCGTaGGGGGTTCGGCTGCCGACA +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSATAGP*GVRLPT
Trigger: TGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGC...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCTTAGCAAATACAGAGTaGAAAGAGTGTGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPLANTE*KECAGG
Trigger: GCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAA...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTACAAGAAAGATCTACTaGATCTTGAGCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: PANAVKAPSATPRPRPASTRKIY*ILSHLG
Trigger: TCCAAGATGGCTCAAGATTCAGTAGATCTTTCTTGT...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACAAGGAAAGTAGGTCTTaGGTGCAAACCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTPLRTARLCRARLGGRDKESRS*VQTAAA
Trigger: AGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTT...GTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTCAAGAAAGCCAATaGTCTCGTGAGTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPGQESQ*SRELSQ
Trigger: CTGAGATAACTCACGAGATCATTGGCTTTCTTGACC...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCTACCGAAGGCTCACTTaGGTCATTAGTGAACATGTC +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPYRRLT*VISEHV
Trigger: GACATGTTCACTAATGACTCAAGTGAGCCTTCGGTA...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATACCGCAGCTGCTTGCTTaGTTTCTCCAGAGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: EQPASAGHALEDATLGQIPQLLA*FLQSFY
Trigger: GTAGAAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGG...TATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTCTGGACCATAGTCTGTaGTCTCTGCTGCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFLDHSL*SLLPPI
Trigger: GATGGGAGGCAGCAGAGAGCACAGACTATGGTCCAG...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAACGCCTTGCCATCCCTaGCTCCCTGCGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPTPCHP*LPAAAP
Trigger: AGGGGCAGCCGCAGGGAGGCAGGGATGGCAAGGCGT...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCAAGACAGGTGTCTTGCTaGGTTTCCAAAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WPGSAAGTPLRTARLCRARQVSC*VSKVEA
Trigger: GGCTTCCACTTTGGAAACCCAGCAAGACACCTGTCT...TGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp CCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCAGCCTCAAAGAACTCTaGCTGGAGGATTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PPLQGTPWRTRPWGRYGSSLKEL*LEDFLR
Trigger: CCTCAGGAAATCCTCCAGCCAGAGTTCTTTGAGGCT...GCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp CCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTTGCTTTTTCAAGGCTaGGAAGGTGCCGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PPLQGTPWRTRPWGRYGSLLFQG*EGAEAR
Trigger: TCTGGCTTCGGCACCTTCCCAGCCTTGAAAAAGCAA...GCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCAGCCTCTTGAATAGCTaGGATTACAGATGCATGCCA +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPSLLNS*DYRCMP
Trigger: TGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCACCACAACAGGAGGCCTaGTCCCAGTGGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPPQQEA*SQWPLS
Trigger: AGAGAGGGGCCACTGGGACCAGGCCTCCTGTTGTGG...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCAACCCTGGGGCAGATATaGCAGCTGAGCAATAACAGA +
Preference number: 4 (lower is better)
Translates to: WPGSAAGTPLRTARLCRATLGQI*QLSNNR
Trigger: TCTGTTATTGCTCAGCTGCCATATCTGCCCCAGGGT...TGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
3UTR CAA 72 bp GGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTaGCCGAAATCGAAGGCAACAAGAGGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GCHSFPVAPAQA*PKSKATRGGGG
Trigger: CCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCATCCAAAGTGGAAGCCTaGTCCCATACAGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: WPGSAAGTPLRTARLCRASKVEA*SHTESF
Trigger: GAAGCTTTCTGTATGGGATCAGGCTTCCACTTTGGA...TGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp TGGCTGTGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCATCGGTTTCCAGGAGTaGACACCTGAACATCTCATC +
Preference number: 4 (lower is better)
Translates to: WLWPGSAAGTPLRTARLCIGFQE*TPEHLI
Trigger: GATGAGATGTTCAGGTGTGCACTCCTGGAAACCGAT...GCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGCAAACCGCAGCTGCTTaGTTGCTTTCTCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGQTAAA*LLSPEL
Trigger: AAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGTTTG...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGTCTGTGCCCTGTCCTaGTACCGTCTGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPVCALS*YRLQVL
Trigger: CAGGACCTGCAGACGGTAGCAGGACAGGGCACAGAC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGGCACCCACACGGCCTaGGTGCCTTCTAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPGTHTA*VPSRLE
Trigger: CTCAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAGCTGGGATTACAGATaGATGCCATTGCACCCCGAT +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGSWDYR*MPLHPD
Trigger: ATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCACAGCAGGCACTTCAGTaGCACGTCCCCAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPQQALQ*HVPRGT
Trigger: TGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTG...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGCCCAGCATCTCGGATaGCATTCCTTCCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPAQHLG*HSFPVA
Trigger: TGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGGCTGTGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCACCATGCCTGCAGGTTaGCATGACATATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: WLWPGSAAGTPLRTARLCTMPAG*HDICHH
Trigger: ATGATGGCATATGTCATGGCAACCTGCAGGCATGGT...GCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAGGCCGCCACCTGTCTTaGAGGTGGAGGGAATGGCCG +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPGRHLS*RWREWP
Trigger: CGGCCATTCCCTCCACCTCCAAGACAGGTGGCGGCC...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CAA 72 bp AATACAGAGTGGAAAGAGTGTGCCGGAGGCCCGGGCTaGGGTGTGCTGTCTGCTCCTGTGGCCTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: NTEWKECAGGPG*GVLSAPVACQA
Trigger: TGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCACCCAAGACCTTGAGTaGAAAGAGCAACTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPTQDLE*KEQLLY
Trigger: ATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACGCATACCCAAGACCTTaGGTGAAAAGAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: GTPLRTARLCRARLGGRDAYPRP*VKRATS
Trigger: AGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGC...GTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTTCGGGCCAGTTTTTCTaGTCTAGGGCTTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFSGQFF*SRAFNA
Trigger: GGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGA...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGGCTGCCTGCGCTCAATaGACAAAAAGAACCAAAACG +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGAACAQ*TKRTKT
Trigger: CGTTTTGGTTCTTTTTGTTCATTGAGCGCAGGCAGC...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375305.6
CDS-3UTR GCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAAAGTAGGTCTTGAGTaGAAACCGCAGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGKVGLE*KPQLLA
Trigger: AGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACAGCAGTTCAGAAATATaGTTCAGTGTCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GTPLRTARLCRARLGGRDSSSEI*FSVWSQ
Trigger: CTGGCTCCAGACACTGAAGCATATTTCTGAACTGCT...GTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp GCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGAAGTCTGGTCTTCAACTaGTTCTCTGAGCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: AAGTPLRTARLCRARLGGSLVFN*FSEQFR
Trigger: TCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACT...TCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAATAGTCTGTGCTCTCTaGTGCCTCCCATCACGGGGG +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPIVCAL*CLPSRG
Trigger: CCCCCGTGATGGGAGGCAGCAGAGAGCACAGACTAT...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGGGCTGAGAGGCTGCTaGTTCTGGACATTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPGLRGC*FWTLPG
Trigger: TCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAAGAAGTCTTCCAGATaGCTAGCTTCACCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGKKSSR*LASPVP
Trigger: TGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAGGGCTTAAGAGTGCCTaGCCGGCCGCCACCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPGLKSA*PAATCL
Trigger: AAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCC...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCGGTTGCCATGACATATaGCATCATAGTCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PPLQGTPWRTRPWGRYGSGCHDI*HHSLCS
Trigger: AGAGCACAGACTATGATGGCATATGTCATGGCAACC...GCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTAGACAGGTGTCTTGCTaGGTTTCCAAAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFRQVSC*VSKVEA
Trigger: GGCTTCCACTTTGGAAACCCAGCAAGACACCTGTCT...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GAAAGGAGACAGTCAAGATGGAAGCAAGCCCTGGCCGGGCTGCTGGGGAGCGAGCAACAACCCGGAATATaGCAGGGTGGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ERRQSRWKQALAGLLGSEQQPGI*QGGRLL
Trigger: AAGCAGCCTGCCACCCTGCCATATTCCGGGTTGTTG...CTCGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATCTTGACTGTCTCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCATGTGCAGCTTGACTTaGGTAAAAACTAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPMCSLT*VKTRNL
Trigger: CAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACAT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GAAAGGAGACAGTCAAGATGGAAGCAAGCCCTGGCCGGGCTGCTGGGGAGCGAGCCGGGATCTGTGGCTTaGAAATTTGGCTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: ERRQSRWKQALAGLLGSEPGSVA*KFGFAS
Trigger: CGAGGCAAAGCCAAATTTTCAAGCCACAGATCCCGG...CTCGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATCTTGACTGTCTCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp TGGCTGTGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGATCTACTGAATCTTaGGCCATCTTGGAAAAAGCG +
Preference number: 4 (lower is better)
Translates to: WLWPGSAAGTPLRTARLCRSTES*AILEKA
Trigger: CGCTTTTTCCAAGATGGCTCAAGATTCAGTAGATCT...GCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp GGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACGGAGCCATTCGCCTTTaGGTGTTAAATCCATTAAGA +
Preference number: 4 (lower is better)
Translates to: GTPLRTARLCRARLGGRDGAIRL*VLNPLR
Trigger: TCTTAATGGATTTAACACTCAAAGGCGAATGGCTCC...GTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGCACTGCGTAAACACCTaGATAGTGGCTATGATTTCC +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGHCVNT*IVAMIS
Trigger: GGAAATCATAGCCACTATTCAGGTGTTTACGCAGTG...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACTTCAACTGCTTCTCTaGGCAGTTCAGAAATATGCT +
Preference number: 4 (lower is better)
Translates to: AAGTPLRTARLCRARLGGLQLLL*AVQKYA
Trigger: AGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAG...TCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCACCAGCTCCCCACCTTTaGGCATCTCTCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPPAPHL*ASLRLG
Trigger: TCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGG...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCAGGGCTCTATACAAAATaGGCCTTGTCCTCTTTAACT +
Preference number: 4 (lower is better)
Translates to: WPGSAAGTPLRTARLCRAGLYTK*ALSSLT
Trigger: AGTTAAAGAGGACAAGGCTCATTTTGTATAGAGCCC...TGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCATTCCAACAAGCTTTTaGCAACAGTTGACCAATTGT +
Preference number: 4 (lower is better)
Translates to: APSATPRPRPASRMPFLPIPTSF*QQLTNC
Trigger: ACAATTGGTCAACTGTTGGCAAAAGCTTGTTGGAAT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTAAAGTAGGTCTTGAGTaGAAACCGCAGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFKVGLE*KPQLLA
Trigger: AGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTT...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAGTCTGGTCTTCAACTaGTTCTCTGAGCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGSLVFN*FSEQFR
Trigger: TCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAGCTGCTTCTGGACATTaGCAGGAGGTGGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSAASGH*QEVAQH
Trigger: GTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGC...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCATGTCCTGCTACCGTCTaGAGGTCCTGGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSCPATV*RSWAER
Trigger: CCTCTCAGCCCAGGACCTGCAGACGGTAGCAGGACA...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCACTTGGGTGTGCTGTCTaGTCCTGTGGCCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPLGCAV*SCGLSG
Trigger: GCCTGACAGGCCACAGGAGCAGACAGCACACCCAAG...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCATTGCCCAGGCTGGAGTaGAGTGTCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPLPRLE*SVMISA
Trigger: AGCCGAGATCATGACACTGCACTCCAGCCTGGGCAA...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCACAGCAGGCACTTCAGTaGCACGTCCCCAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSQQALQ*HVPRGT
Trigger: TGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTG...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCACAACAACCCGGAATATaGCAGGGTGGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPQQPGI*QGGRLL
Trigger: AAGCAGCCTGCCACCCTGCCATATTCCGGGTTGTTG...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAACCGTCTGCAGGTCCTaGGCTGAGAGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSTVCRS*AERLLL
Trigger: AAGCAGCAGCCTCTCAGCCCAGGACCTGCAGACGGT...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCATGCTGTCTGCTCCTGTaGCCTGTCAGGCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSCCLLL*PVRQVQ
Trigger: CTGGACCTGCCTGACAGGCCACAGGAGCAGACAGCA...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGCCTCTTCTGTATTTTTaGCTCTCTCTGAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGPLLYF*LSLRVV
Trigger: CACTACCCTCAGAGAGAGCCAAAAATACAGAAGAGG...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAAGGGGAATAACAGCCTaGTTGGAGGGGCGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPRGITA*LEGRSP
Trigger: CGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCT...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGAACCCAAGACCTTGAGTaGAAAGAGCAACTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: AAGTPLRTARLCRARLGGTQDLE*KEQLLY
Trigger: ATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGT...TCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp GGAAGGTGCCGAAGCCAGAGGCAGACTACAGCTGACATGGGGAGAGAAATCTTCTGGGACACAAACTCGTaGCAGGGACGCCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: GRCRSQRQTTADMGREIFWDTNS*QGRHSL
Trigger: GAGCGAGTGGCGTCCCTGTCACGAGTTTGTGTCCCA...GAAGATTTCTCTCCCCATGTCAGCTGTAGTCTGCCTCTGGCTTCGGCACCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCACCTCCGCAGGACCCATaGGTCTGGTCTTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSPPQDP*VWSSTA
Trigger: AGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGG...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAACCCTGTCGCACCTCTaGAGACCTTGGTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPTLSHL*RPWSSS
Trigger: GGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGT...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATAAATGTGAGGATCTGTTaGCTGATCCAAGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: EQPASAGHALEDATLGQINVRIC*LIQERR
Trigger: TCTCCTTTCTTGGATCAGTCAACAGATCCTCACATT...TATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp GAAAGGAGACAGTCAAGATGGAAGCAAGCCCTGGCCGGGCTGCTGGGGAGCGAGCAAACCGCAGCTGCTTaGTTGCTTTCTCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ERRQSRWKQALAGLLGSEQTAAA*LLSPEL
Trigger: AAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGTTTG...CTCGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATCTTGACTGTCTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGCCGACATCAGTAATTaGTCTGCCACCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPADISN*SATISA
Trigger: GGCTGAGATGGTGGCAGAGCAATTACTGATGTCGGC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGCCACCATCTCAGCCCATCCTCCGAAGTGAATGAACAGGAACCAGCTCTCAAAGTCTGTGCTCTCTGCTaGCTCCCATCACGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: CHHLSPSSEVNEQEPALKVCALC*LPSRGP
Trigger: CGGCCCCCGTGATGGGAGGCAGCAGAGAGCACAGAC...TTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCACCTGATCAGCTGTTGTaGAGGAGCTCTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPPDQLL*RSSEVC
Trigger: ACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGG...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCACCCACACGGCCTGCGTaGCTTCTAGACTTGAGTTCG +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSPTRPA*LLDLSS
Trigger: CGAACTCAAGTCTAGAAGGCACGCAGGCCGTGTGGG...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGTCCCACCCAGGCCTTTaGTTTAGTAATTATCAAGCT +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGSHPGL*FSNYQA
Trigger: AGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGA...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAGGAACTGGGAGATTCTaGAGATGGGCCGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSGTGRF*RWAEVR
Trigger: CCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCC...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGTGGCTTGAAAATTTaGCTTTGCCTCGTATTGGCT +
Preference number: 4 (lower is better)
Translates to: EQPASAGHALEDATLGQICGLKI*LCLVLA
Trigger: AGCCAATACGAGGCAAAGCCAAATTTTCAAGCCACA...TATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp GAAAGGAGACAGTCAAGATGGAAGCAAGCCCTGGCCGGGCTGCTGGGGAGCGAGCTTGCAGCAGCACCATaGCAAGAGATGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: ERRQSRWKQALAGLLGSELAAAP*QEMEKC
Trigger: ACACTTCTCCATCTCTTGCCATGGTGCTGCTGCAAG...CTCGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATCTTGACTGTCTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAAGAGGCTGCTGCTTCTaGACATTGCCAGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSRGCCF*TLPGGG
Trigger: GCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCT...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTCCTCTTCTGTATTTTTaGCTCTCTCTGAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFPLLYF*LSLRVV
Trigger: CACTACCCTCAGAGAGAGCCAAAAATACAGAAGAGG...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGACAAGAAAGATCTACTaGATCTTGAGCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGTRKIY*ILSHLG
Trigger: TCCAAGATGGCTCAAGATTCAGTAGATCTTTCTTGT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAGGGTGGCAGGCTGCTTaGGGCAGCGATGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPGWQAA*GSDESF
Trigger: AAAAGATTCATCGCTGCCTCAAGCAGCCTGCCACCC...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TCTGTCAGGGTAATAAGTGGGACACAAACTCGTGACAGGGACGCCACTCGCTCGGTTGTGCAGGAGCTCTaGGGTCTGTGTCTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: SVRVISGTQTRDRDATRSVVQEL*GLCLCP
Trigger: AGGGCACAGACACAGACCTCAGAGCTCCTGCACAAC...CGAGCGAGTGGCGTCCCTGTCACGAGTTTGTGTCCCACTTATTACCCTGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTGAAGAAAGGCTCAGGTaGAAAGTTCCTGGAATTTTC +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFEERLR*KVPGIF
Trigger: GAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTC...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCATAGTAATCTATAGGTaGATACCCAAGACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: PPLQGTPWRTRPWGRYGSIVIYR*IPKTLS
Trigger: ACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT...GCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp CTCTGGCTGGAGGATTTCCTGAGGTTCACGTCCATGACAGATGAGGAGAGCCTCATAGTCTGTGCTCTCTaGTGCCTCCCATCACGGGGG +
Preference number: 4 (lower is better)
Translates to: LWLEDFLRFTSMTDEESLIVCAL*CLPSRG
Trigger: CCCCCGTGATGGGAGGCAGCAGAGAGCACAGACTAT...GAGGCTCTCCTCATCTGTCATGGACGTGAACCTCAGGAAATCCTCCAGCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp GAGGAGAGCCTCCACCAGGGGGTCAACATCTGTCAGGGTAATAAGTGGGACACACCTGGGCTGAGAGGCTaGTGCTTCTGGACATTGCCA +
Preference number: 4 (lower is better)
Translates to: EESLHQGVNICQGNKWDTPGLRG*CFWTLP
Trigger: TGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGG...TGTGTCCCACTTATTACCCTGACAGATGTTGACCCCCTGGTGGAGGCTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCATCTCTAGGGGTTCCCTaGTGCCACCATGTCCACAGA +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSSLGVP*CHHVHR
Trigger: TCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGA...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCCCAGGAACCCCTGGCTaGCCAGAAAGCACCACCGGC +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTPGTPG*PESTTG
Trigger: GCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGG...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GCAATGTTCACACCTCTGCCTCTCAAGTATGCACTCTGTGGGTGGGGCCCTAGACACGTCCCCAGACATTaGTCAAATCCCCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: AMFTPLPLKYALCGWGPRHVPRH*SNPLGS
Trigger: GCTGCCGAGGGGATTTGAGCAATGTCTGGGGACGTG...TCTAGGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGAGGTGTGAACATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR CCA 90 bp AACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATAGACTACAGCTGACATaGGGAGAGAAATCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NSPPLQGTPWRTRPWGRYRLQLT*GEKSSS
Trigger: TGAAGAAGATTTCTCTCCCCATGTCAGCTGTAGTCT...ATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp AGCCTCCACCAGGGGGTCAACATCTGTCAGGGTAATAAGTGGGACACAAACTCGACCGTCTGCAGGTCCTaGGCTGAGAGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLHQGVNICQGNKWDTNSTVCRS*AERLLL
Trigger: AAGCAGCAGCCTCTCAGCCCAGGACCTGCAGACGGT...CGAGTTTGTGTCCCACTTATTACCCTGACAGATGTTGACCCCCTGGTGGAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCTCCCAGGCGATCGTGTaGCCTCCAGGAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTSQAIV*PPGAQS
Trigger: GCTCTGGGCTCCTGGAGGCCACACGATCGCCTGGGA...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCCTGCAGGGCACGCCTTaGAGGACGCGACCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLLQGTP*RTRPWG
Trigger: GCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAG...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCACCAGGAGTGCACACCTaGACATCTCATCAACAACCC +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPPGVHT*TSHQQP
Trigger: GGGTTGTTGATGAGATGTTCAGGTGTGCACTCCTGG...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAATCCTCCGAAGTGAATaGACAGGAACCAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPILRSE*TGTSSQ
Trigger: TTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGAT...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GAAAGGAGACAGTCAAGATGGAAGCAAGCCCTGGCCGGGCTGCTGGGGAGCGAGGGCAGATATGGCAGCTaGGCAATAACAGATCAAATG +
Preference number: 4 (lower is better)
Translates to: ERRQSRWKQALAGLLGSEGRYGS*AITDQM
Trigger: CATTTGATCTGTTATTGCTCAGCTGCCATATCTGCC...CTCGCTCCCCAGCAGCCCGGCCAGGGCTTGCTTCCATCTTGACTGTCTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAGCCGACATCAGTAATTaGTCTGCCACCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPADISN*SATISA
Trigger: GGCTGAGATGGTGGCAGAGCAATTACTGATGTCGGC...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCAGAGTGGAAAGAGTGTaGCGGAGGCCCGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTRVERV*RRPGLG
Trigger: CCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCT...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAAAGAAGTCTTCCAGATaGCTAGCTTCACCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPKKSSR*LASPVP
Trigger: TGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTT...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGCACACATTAAATCTTTaGTCCTCTCCTTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGHTLNL*SSPLKK
Trigger: CTTCTTCAAAGGAGAGGAGCAAAGATTTAATGTGTG...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375305.6
CDS-3UTR GCA 90 bp GCAATGTTCACACCTCTGCCTCTCAAGTATGCACTCTGTGGGTGGGGCCCTAGACTTCTACCTCCTCAATaGCAGGAGCCCCCTCACAAG +
Preference number: 4 (lower is better)
Translates to: AMFTPLPLKYALCGWGPRLLPPQ*QEPPHK
Trigger: CTTGTGAGGGGGCTCCTGGCATTGAGGAGGTAGAAG...TCTAGGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGAGGTGTGAACATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR GCA 90 bp GTATGTTGCTCAGGCTGCTGTGGAGCTCCTGAGCTCAAGGGCAATGTTCACACCGTATGTTGCTCAGGCTaGTGTGGAGCTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VCCSGCCGAPELKGNVHTVCCSG*CGAPEL
Trigger: GAGCTCAGGAGCTCCACAGCAGCCTGAGCAACATAC...GGTGTGAACATTGCCCTTGAGCTCAGGAGCTCCACAGCAGCCTGAGCAACATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR CCA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAATCTTGAGCCATCTTaGAAAAAGCGAAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: GGGLKSACPAATCLGGGGNLEPS*KKRKGD
Trigger: ATCACCTTTTCGCTTTTTCCAAGATGGCTCAAGATT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATAAATCTTGAGCCATCTTaGAAAAAGCGAAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: EQPASAGHALEDATLGQINLEPS*KKRKGD
Trigger: ATCACCTTTTCGCTTTTTCCAAGATGGCTCAAGATT...TATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGGCCGCCACCTGTCTTaGAGGTGGAGGGAATGGCCG +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKGRHLS*RWREWP
Trigger: CGGCCATTCCCTCCACCTCCAAGACAGGTGGCGGCC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAGAAAAAGCGAAAAGGTaGTGTCCCTTCACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPEKAKR*CPFTAA
Trigger: GGCTGCTGTGAAGGGACATCACCTTTTCGCTTTTTC...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAGAAAAAGCGAAAAGGTaGTGTCCCTTCACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSEKAKR*CPFTAA
Trigger: GGCTGCTGTGAAGGGACATCACCTTTTCGCTTTTTC...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTAGTGCTGAAAGTATATaGGATAATACACCCTGTATC +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFSAESI*DNTPCI
Trigger: GATACAGGGTGTATTATCTCATATACTTTCAGCACT...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp AACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATAGTGCTGAAAGTATATaGGATAATACACCCTGTATC +
Preference number: 4 (lower is better)
Translates to: NSPPLQGTPWRTRPWGRYSAESI*DNTPCI
Trigger: GATACAGGGTGTATTATCTCATATACTTTCAGCACT...ATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCTGGGACACAAACTCGTaGCAGGGACGCCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTWDTNS*QGRHSL
Trigger: GAGCGAGTGGCGTCCCTGTCACGAGTTTGTGTCCCA...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAGAGGCAGACTACAGCTaGCATGGGGAGAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSEADYS*HGERNL
Trigger: AAGATTTCTCTCCCCATGTCAGCTGTAGTCTGCCTC...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAGTTATCTCAGCAGTGTaGGCCATCAGGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPVISAV*AIRVMT
Trigger: TGTCATCACCCTGATGGCTCACACTGCTGAGATAAC...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCATCGGGCCAGTTTTTCTaGTCTAGGGCTTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSSGQFF*SRAFNA
Trigger: GGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGA...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAGACCCTGACTCCCCTTaGAGAATTTCTCCATACAGC +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPDPDSP*RISPYS
Trigger: GCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTC...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCGGTCCTCGCGGGAGCTaGTTCAGCAGTTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTGPRGS*FSSLGS
Trigger: ACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACC...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289081.8
CDS-3UTR GCA 90 bp CCCGAGGGATATCTTGAGGGTCTTGCAGCAGCACCATGGCAAGAGATGGAGAAGCCGCAGCTGCTTGCTTaGTTTCTCCAGAGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: PEGYLEGLAAAPWQEMEKPQLLA*FLQSFY
Trigger: GTAGAAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGG...CTTCTCCATCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp AGGAAGTTGAGGAGAAGGTGCCTGATCAGCTGTTGTGCAGGAGCTCTGAGGTCTCTGGACCATAGTCTGTaGTCTCTGCTGCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: RKLRRRCLISCCAGALRSLDHSL*SLLPPI
Trigger: GATGGGAGGCAGCAGAGAGCACAGACTATGGTCCAG...AGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp GGAAGGTGCCGAAGCCAGAGGCAGACTACAGCTGACATGGGGAGAGAAATCTTCCCTGATCAGCTGTTGTaGAGGAGCTCTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GRCRSQRQTTADMGREIFPDQLL*RSSEVC
Trigger: ACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGG...GAAGATTTCTCTCCCCATGTCAGCTGTAGTCTGCCTCTGGCTTCGGCACCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCACACTTACTCCACAAATaGGTGGCCACAGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSHLLHK*VATGHH
Trigger: GTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTG...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGCACACCCTTCTGACTaGAGCATTTCTCAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPAHPSD*SISQKK
Trigger: TTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAACCGCCCGGGATCTGTaGCTTGAAAATTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSTARDL*LENLAL
Trigger: CAAAGCCAAATTTTCAAGCCACAGATCCCGGGCGGT...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289081.8
CDS-3UTR CCA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTAATCTTGAGCCATCTTaGAAAAAGCGAAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFNLEPS*KKRKGD
Trigger: ATCACCTTTTCGCTTTTTCCAAGATGGCTCAAGATT...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAAGCCTCAAAGAACTCTaGCTGGAGGATTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPSLKEL*LEDFLR
Trigger: CCTCAGGAAATCCTCCAGCCAGAGTTCTTTGAGGCT...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCACTTGCAGCAGCACCATaGCAAGAGATGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSLAAAP*QEMEKC
Trigger: ACACTTCTCCATCTCTTGCCATGGTGCTGCTGCAAG...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGTCCCAGGCGATCGTGTaGCCTCCAGGAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: CVAATETVQELLSCEESKSQAIV*PPGAQS
Trigger: GCTCTGGGCTCCTGGAGGCCACACGATCGCCTGGGA...CTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCATACTCCACAAATGCGTaGCCACAGGTCATCACCTGT +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPYSTNA*PQVITC
Trigger: ACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTA...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCCACCTGTCTTGGAGGTaGAGGGAATGGCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTHLSWR*REWPRG
Trigger: ACCCCTCGGCCATTCCCTCCACCTCCAAGACAGGTG...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGCCATTCCTTCCCGGTaGCACCTGCCCAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKAIPSR*HLPRLC
Trigger: GCAAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GCAATGTTCACACCTCTGCCTCTCAAGTATGCACTCTGTGGGTGGGGCCCTAGATATGCACTCTGTGGGTaGGGCCCTAGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AMFTPLPLKYALCGWGPRYALCG*GPRICF
Trigger: GAAGCAGATTCTAGGGCCCCACCCACAGAGTGCATA...TCTAGGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGAGGTGTGAACATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR TCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAACACGTCCATGACAGATaGGGAGAGCCTCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKHVHDR*GEPPPG
Trigger: CCCTGGTGGAGGCTCTCCTCATCTGTCATGGACGTG...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CTCTGGCTGGAGGATTTCCTGAGGTTCACGTCCATGACAGATGAGGAGAGCCTCAAGGAAAGTAGGTCTTaGGTGCAAACCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LWLEDFLRFTSMTDEESLKESRS*VQTAAA
Trigger: AGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTT...GAGGCTCTCCTCATCTGTCATGGACGTGAACCTCAGGAAATCCTCCAGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCGTTGTGCAGGAGCTCTaGGGTCTGTGTCTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTVVQEL*GLCLCP
Trigger: AGGGCACAGACACAGACCTCAGAGCTCCTGCACAAC...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAACCAGCTCCCCACCTTTaGGCATCTCTCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKPAPHL*ASLRLG
Trigger: TCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGG...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp AGCCTCCACCAGGGGGTCAACATCTGTCAGGGTAATAAGTGGGACACAAACTCGGCCGACATCAGTAATTaGTCTGCCACCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SLHQGVNICQGNKWDTNSADISN*SATISA
Trigger: GGCTGAGATGGTGGCAGAGCAATTACTGATGTCGGC...CGAGTTTGTGTCCCACTTATTACCCTGACAGATGTTGACCCCCTGGTGGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCATAGTCTGTGCTCTCTaGTGCCTCCCATCACGGGGG +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTIVCAL*CLPSRG
Trigger: CCCCCGTGATGGGAGGCAGCAGAGAGCACAGACTAT...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCGGGCTGAGAGGCTGCTaGTTCTGGACATTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTGLRGC*FWTLPG
Trigger: TCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCC...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAATGTCCTGCTACCGTCTaGAGGTCCTGGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKCPATV*RSWAER
Trigger: CCTCTCAGCCCAGGACCTGCAGACGGTAGCAGGACA...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGGCACCCACACGGCCTaGGTGCCTTCTAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKGTHTA*VPSRLE
Trigger: CTCAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCCTAGGGGTTCCCTGCTaGCACCATGTCCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTLGVPC*HHVHRG
Trigger: TCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAG...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GAGGAGAGCCTCCACCAGGGGGTCAACATCTGTCAGGGTAATAAGTGGGACACACTTGCAGCAGCACCATaGCAAGAGATGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: EESLHQGVNICQGNKWDTLAAAP*QEMEKC
Trigger: ACACTTCTCCATCTCTTGCCATGGTGCTGCTGCAAG...TGTGTCCCACTTATTACCCTGACAGATGTTGACCCCCTGGTGGAGGCTCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp TGCCACCATCTCAGCCCATCCTCCGAAGTGAATGAACAGGAACCAGCTCTCAAAATATGCTTCAGTGTCTaGAGCCAGTGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: CHHLSPSSEVNEQEPALKICFSV*SQCPRG
Trigger: CCCTCGGGGACACTGGCTCCAGACACTGAAGCATAT...TTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCATACAGCAAGACAGTGTaGCTTTATCCCAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPYSKTV*LYPRSL
Trigger: CAGGGATCTGGGATAAAGCCACACTGTCTTGCTGTA...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCACCCAGCCACAAGTTCTaGCTTAAAGTCAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPPSHKF*LKVRTG
Trigger: TCCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGG...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGACCACAGGACAGGGTaGAGGACTGTCCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKDHRTG*RTVPGV
Trigger: GACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GGAAGGTGCCGAAGCCAGAGGCAGACTACAGCTGACATGGGGAGAGAAATCTTCTCCAAAGTGGAAGCCTaGTCCCATACAGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRCRSQRQTTADMGREIFSKVEA*SHTESF
Trigger: GAAGCTTTCTGTATGGGATCAGGCTTCCACTTTGGA...GAAGATTTCTCTCCCCATGTCAGCTGTAGTCTGCCTCTGGCTTCGGCACCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCACACTGCGTAAACACCTaGATAGTGGCTATGATTTCC +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSHCVNT*IVAMIS
Trigger: GGAAATCATAGCCACTATTCAGGTGTTTACGCAGTG...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp CTGGAGGATTTCCTGAGGTTCACGTCCATGACAGATGAGGAGAGCCTCCACCAGATCCTCCGAAGTGAATaGACAGGAACCAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LEDFLRFTSMTDEESLHQILRSE*TGTSSQ
Trigger: TTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGAT...CTGGTGGAGGCTCTCCTCATCTGTCATGGACGTGAACCTCAGGAAATCCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp AGGAAGTTGAGGAGAAGGTGCCTGATCAGCTGTTGTGCAGGAGCTCTGAGGTCTTCGGGCCAGTTTTTCTaGTCTAGGGCTTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: RKLRRRCLISCCAGALRSSGQFF*SRAFNA
Trigger: GGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGA...AGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp GTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGTCTTGTTGCAGGGGCCTaGCCTGTGCATTCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: VWLLQKQSRSYCHVKKASLVAGA*PVHSRL
Trigger: AAGGCGGGAATGCACAGGTCAGGCCCCTGCAACAAG...ACTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR GCA 90 bp AGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGCTTGCTTTCTCTCAAGGCTGGGAAGGTaGCGAAGCCAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: SVRKVGLECKPQLLACFLSRLGR*RSQRQT
Trigger: AGTCTGCCTCTGGCTTCGGCACCTTCCCAGCCTTGA...GAGAAAGCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp AGGAAGTTGAGGAGAAGGTGCCTGATCAGCTGTTGTGCAGGAGCTCTGAGGTCTCAAACCGCAGCTGCTTaGTTGCTTTCTCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RKLRRRCLISCCAGALRSQTAAA*LLSPEL
Trigger: AAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGTTTG...AGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAAGCAGTTCAGAAATATaGTTCAGTGTCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPSSSEI*FSVWSQ
Trigger: CTGGCTCCAGACACTGAAGCATATTTCTGAACTGCT...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAAGTCTGGTCTTCAACTaGTTCTCTGAGCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSSLVFN*FSEQFR
Trigger: TCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACT...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAACCTGGGCTGAGAGGCTaGTGCTTCTGGACATTGCCA +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKPGLRG*CFWTLP
Trigger: TGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGG...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp AAGAGATGGAGAAGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTTGTCCTGCTACCGTCTaGAGGTCCTGGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KRWRSVRKVGLECKPQLLCPATV*RSWAER
Trigger: CCTCTCAGCCCAGGACCTGCAGACGGTAGCAGGACA...AAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp TGTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGGTCTGTGCCCTGTCCTaGTACCGTCTGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CVAATETVQELLSCEESKVCALS*YRLQVL
Trigger: CAGGACCTGCAGACGGTAGCAGGACAGGGCACAGAC...CTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAACCCACACGGCCTGCGTaGCTTCTAGACTTGAGTTCG +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKPTRPA*LLDLSS
Trigger: CGAACTCAAGTCTAGAAGGCACGCAGGCCGTGTGGG...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAGCACACCCTTCTGACTaGAGCATTTCTCAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSAHPSD*SISQKK
Trigger: TTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGC...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCATATGCTTCAGTGTCTaGAGCCAGTGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTICFSV*SQCPRG
Trigger: CCCTCGGGGACACTGGCTCCAGACACTGAAGCATAT...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp GCAATGTTCACACCTCTGCCTCTCAAGTATGCACTCTGTGGGTGGGGCCCTAGACAGTGTTGCCACCATTaGCATTTTGGGCCTGACAAT +
Preference number: 4 (lower is better)
Translates to: AMFTPLPLKYALCGWGPRQCCHH*HFGPDN
Trigger: ATTGTCAGGCCCAAAATGCCAATGGTGGCAACACTG...TCTAGGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGAGGTGTGAACATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR TCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAAGATCTACTGAATCTTaGGCCATCTTGGAAAAAGCG +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPRSTES*AILEKA
Trigger: CGCTTTTTCCAAGATGGCTCAAGATTCAGTAGATCT...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAGGAGCCATTCGCCTTTaGGTGTTAAATCCATTAAGA +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSGAIRL*VLNPLR
Trigger: TCTTAATGGATTTAACACTCAAAGGCGAATGGCTCC...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp AAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCTTCACGTCCATGACAGATaGGGAGAGCCTCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: KCQSQEKQGSIQNEPCPLHVHDR*GEPPPG
Trigger: CCCTGGTGGAGGCTCTCCTCATCTGTCATGGACGTG...AAGAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp TTACAGCCTCAAAGAACTCTGGCTGGAGGATTTCCTGAGGTTCACGTCCATGACCCAGGAGTGCACACCTaGACATCTCATCAACAACCC +
Preference number: 4 (lower is better)
Translates to: LQPQRTLAGGFPEVHVHDPGVHT*TSHQQP
Trigger: GGGTTGTTGATGAGATGTTCAGGTGTGCACTCCTGG...GTCATGGACGTGAACCTCAGGAAATCCTCCAGCCAGAGTTCTTTGAGGCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCCCTCCGCAGGACCCATaGGTCTGGTCTTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLPPQDP*VWSSTA
Trigger: AGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGG...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGCCCATCCTCCGAAGTaGATGAACAGGAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKAHPPK*MNRNQL
Trigger: GAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp AGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGCTTGCTTTCTCGCCCATCCTCCGAAGTaGATGAACAGGAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SVRKVGLECKPQLLACFLAHPPK*MNRNQL
Trigger: GAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGC...GAGAAAGCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAAGGACTCGGCAGCTGTaGAGGAACTGGGAGATTCTG +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKRTRQL*RNWEIL
Trigger: CAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCT...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAATAGTAATCTATAGGTaGATACCCAAGACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPIVIYR*IPKTLS
Trigger: ACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAACTGGACCATAGTCTGTaGTCTCTGCTGCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKLDHSL*SLLPPI
Trigger: GATGGGAGGCAGCAGAGAGCACAGACTATGGTCCAG...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCCACCTGCCCAGGCTTTaGCGAAATCGAAGGCAACAA +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTHLPRL*RNRRQQ
Trigger: TTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTG...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GCAATGTTCACACCTCTGCCTCTCAAGTATGCACTCTGTGGGTGGGGCCCTAGATCCCAACAGGATCAATaGAGAAGGCAGGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: AMFTPLPLKYALCGWGPRSQQDQ*RRQVIS
Trigger: AGAAATCACCTGCCTTCTGCATTGATCCTGTTGGGA...TCTAGGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGAGGTGTGAACATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR CCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCATCTTCTTCAGCAAAATaGCCTCGTTTACAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPSSSAK*PRLQPQ
Trigger: TTGAGGCTGTAAACGAGGCCATTTTGCTGAAGAAGA...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAAGACTACAGCTGACATaGGGAGAGAAATCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSRLQLT*GEKSSS
Trigger: TGAAGAAGATTTCTCTCCCCATGTCAGCTGTAGTCT...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCAACATCTGTCAGGGTAATAAGTGGGACACAAACTCGTGACAGGTTGCTTTTTCAAGGCTaGGAAGGTGCCGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TRGSTSVRVISGTQTRDRLLFQG*EGAEAR
Trigger: TCTGGCTTCGGCACCTTCCCAGCCTTGAAAAAGCAA...CCTGTCACGAGTTTGTGTCCCACTTATTACCCTGACAGATGTTGACCCCCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp ATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTGCCACAGCAGGGCCGTaGGGGGTTCGGCTGCCGACA +
Preference number: 4 (lower is better)
Translates to: IVIYRCIPKTLSEKSNFFATAGP*GVRLPT
Trigger: TGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGC...AAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGAGTCACAGCTTCCATaGCCCAGCCACAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKESQLP*PSHKFW
Trigger: CCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAACCCAAGACCTTGAGTaGAAAGAGCAACTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SHSPARALTPQMRGHRSSTQDLE*KEQLLY
Trigger: ATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGT...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp AGCCTCCACCAGGGGGTCAACATCTGTCAGGGTAATAAGTGGGACACAAACTCGGCATACCCAAGACCTTaGGTGAAAAGAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: SLHQGVNICQGNKWDTNSAYPRP*VKRATS
Trigger: AGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGC...CGAGTTTGTGTCCCACTTATTACCCTGACAGATGTTGACCCCCTGGTGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp CTGGAGGATTTCCTGAGGTTCACGTCCATGACAGATGAGGAGAGCCTCCACCAGGGAGCCATTCGCCTTTaGGTGTTAAATCCATTAAGA +
Preference number: 4 (lower is better)
Translates to: LEDFLRFTSMTDEESLHQGAIRL*VLNPLR
Trigger: TCTTAATGGATTTAACACTCAAAGGCGAATGGCTCC...CTGGTGGAGGCTCTCCTCATCTGTCATGGACGTGAACCTCAGGAAATCCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAACCAGGAGTGCACACCTaGACATCTCATCAACAACCC +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKPGVHT*TSHQQP
Trigger: GGGTTGTTGATGAGATGTTCAGGTGTGCACTCCTGG...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCGACCCTGACTCCCCTTaGAGAATTTCTCCATACAGC +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTDPDSP*RISPYS
Trigger: GCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTC...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCACAGGAGAACGCCTCTaGCCACAAGGCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLTGERL*PQGWRS
Trigger: TGATCTCCAGCCTTGTGGTCAGAGGCGTTCTCCTGT...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAACCGCAGCTGCTTGCTTaGTTTCTCCAGAGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKPQLLA*FLQSFY
Trigger: GTAGAAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGG...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCCAAACCGCAGCTGCTTaGTTGCTTTCTCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTQTAAA*LLSPEL
Trigger: AAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGTTTG...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAACCTGATCAGCTGTTGTaGAGGAGCTCTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKPDQLL*RSSEVC
Trigger: ACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGG...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAACACCTGCCCAGGCTTTaGCGAAATCGAAGGCAACAA +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKHLPRL*RNRRQQ
Trigger: TTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTG...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGGAGAAGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGCTTGCAGCCTCAAAGAACTCTaGCTGGAGGATTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WRSVRKVGLECKPQLLACSLKEL*LEDFLR
Trigger: CCTCAGGAAATCCTCCAGCCAGAGTTCTTTGAGGCT...GCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp GAGGAGAGCCTCCACCAGGGGGTCAACATCTGTCAGGGTAATAAGTGGGACACAAGACTACAGCTGACATaGGGAGAGAAATCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: EESLHQGVNICQGNKWDTRLQLT*GEKSSS
Trigger: TGAAGAAGATTTCTCTCCCCATGTCAGCTGTAGTCT...TGTGTCCCACTTATTACCCTGACAGATGTTGACCCCCTGGTGGAGGCTCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCCGTTTTGCAGGAGAATaGGCTGGCAGCGTCTCGTCT +
Preference number: 4 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLRFAGE*AGSVSS
Trigger: AGACGAGACGCTGCCAGCCCATTCTCCTGCAAAACG...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp GGAAGGTGCCGAAGCCAGAGGCAGACTACAGCTGACATGGGGAGAGAAATCTTCACCCAAGACCTTGAGTaGAAAGAGCAACTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GRCRSQRQTTADMGREIFTQDLE*KEQLLY
Trigger: ATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGT...GAAGATTTCTCTCCCCATGTCAGCTGTAGTCTGCCTCTGGCTTCGGCACCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp AGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCCACGTCCATGACAGATaGGGAGAGCCTCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: RIVIYRCIPKTLSEKSNFHVHDR*GEPPPG
Trigger: CCCTGGTGGAGGCTCTCCTCATCTGTCATGGACGTG...GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGTTATCTCAGCAGTGTaGGCCATCAGGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKVISAV*AIRVMT
Trigger: TGTCATCACCCTGATGGCTCACACTGCTGAGATAAC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAATTCCAACAAGCTTTTaGCAACAGTTGACCAATTGT +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPIPTSF*QQLTNC
Trigger: ACAATTGGTCAACTGTTGGCAAAAGCTTGTTGGAAT...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCATCGGTTTCCAGGAGTaGACACCTGAACATCTCATC +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTIGFQE*TPEHLI
Trigger: GATGAGATGTTCAGGTGTGCACTCCTGGAAACCGAT...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGGAGAAGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGCTTGCAAGTTGAGGAGAAGGTaGCTGATCAGCTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: WRSVRKVGLECKPQLLACKLRRR*LISCCA
Trigger: TGCACAACAGCTGATCAGGCACCTTCTCCTCAACTT...GCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGACGCCTTGCCATCCCTaGCTCCCTGCGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLTPCHP*LPAAAP
Trigger: AGGGGCAGCCGCAGGGAGGCAGGGATGGCAAGGCGT...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCTGCCATCATAGTCTGTaGTCTCTGCTGCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLCHHSL*SLLPPI
Trigger: GATGGGAGGCAGCAGAGAGCACAGACTATGATGGCA...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAATTGCTTTTTCAAGGCTaGGAAGGTGCCGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKLLFQG*EGAEAR
Trigger: TCTGGCTTCGGCACCTTCCCAGCCTTGAAAAAGCAA...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGCCGGAGGCCCGGGCTTaGGTGTGCTGTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLPEARA*VCCLLL
Trigger: CAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGG...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp TGTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGCACAGGCTGGCAAGATaGCCGAATAGGAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: CVAATETVQELLSCEESKHRLAR*PNRNSS
Trigger: AGAGCTGTTCCTATTCGGCCATCTTGCCAGCCTGTG...CTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR TCA 90 bp GTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGTGAGGCAGACTACAGCTaGCATGGGGAGAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: VWLLQKQSRSYCHVKKASEADYS*HGERNL
Trigger: AAGATTTCTCTCCCCATGTCAGCTGTAGTCTGCCTC...ACTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp AAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCTTCCAGGAGTGCACACCTaGACATCTCATCAACAACCC +
Preference number: 4 (lower is better)
Translates to: KCQSQEKQGSIQNEPCPLPGVHT*TSHQQP
Trigger: GGGTTGTTGATGAGATGTTCAGGTGTGCACTCCTGG...AAGAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp TGCCACCATCTCAGCCCATCCTCCGAAGTGAATGAACAGGAACCAGCTCTCAAACTTCAACTGCTTCTCTaGGCAGTTCAGAAATATGCT +
Preference number: 4 (lower is better)
Translates to: CHHLSPSSEVNEQEPALKLQLLL*AVQKYA
Trigger: AGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAG...TTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp TGTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGGTTATCTCAGCAGTGTaGGCCATCAGGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: CVAATETVQELLSCEESKVISAV*AIRVMT
Trigger: TGTCATCACCCTGATGGCTCACACTGCTGAGATAAC...CTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp TGGAGAAGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGCTTGCGGTCAAGAAAGCCAATaGTCTCGTGAGTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: WRSVRKVGLECKPQLLACGQESQ*SRELSQ
Trigger: CTGAGATAACTCACGAGATCATTGGCTTTCTTGACC...GCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAATTTGCTCCTCTCCTTTaGAGAAGACATAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKFAPLL*RRHSCL
Trigger: CAGGCAGCTATGTCTTCTTCAAAGGAGAGGAGCAAA...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375305.6
CDS-3UTR TCA 90 bp TGTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGTTGGCATTTTGGGCCTaGCAATTCCTTGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CVAATETVQELLSCEESKLAFWA*QFLVAG
Trigger: CCCTGCAACAAGGAATTGTCAGGCCCAAAATGCCAA...CTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR GCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGGTCTGTGCTCTCTGCTaGCTCCCATCACGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLVCALC*LPSRGP
Trigger: CGGCCCCCGTGATGGGAGGCAGCAGAGAGCACAGAC...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATCGCTGCTTCTGGACATTaGCAGGAGGTGGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: VIYRCIPKTLSEKSNFFIAASGH*QEVAQH
Trigger: GTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGC...GATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp AGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCGGGCTGAGAGGCTGCTaGTTCTGGACATTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RIVIYRCIPKTLSEKSNFGLRGC*FWTLPG
Trigger: TCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCC...GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp AAGAGATGGAGAAGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGGAGACTTGTGTGGCTaGTACAGAAACAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KRWRSVRKVGLECKPQLLGDLCG*YRNSPG
Trigger: TCCTGGACTGTTTCTGTAGCAGCCACACAAGTCTCC...AAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp GTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGTAGACAGGTGTCTTGCTaGGTTTCCAAAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VWLLQKQSRSYCHVKKASRQVSC*VSKVEA
Trigger: GGCTTCCACTTTGGAAACCCAGCAAGACACCTGTCT...ACTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649334.1
ENST00000649519.1
CDS-3UTR CCA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAACACACAAATCAAAATaGACAAAAGCAAGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPTHKSK*TKASLD
Trigger: GTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGT...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGTTCCAAAGTGGAAGCCTaGTCCCATACAGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VWLLQKQSRSYCHVKKASSKVEA*SHTESF
Trigger: GAAGCTTTCTGTATGGGATCAGGCTTCCACTTTGGA...ACTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649334.1
ENST00000649519.1
CDS-3UTR TCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGCATACCCAAGACCTTaGGTGAAAAGAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKAYPRP*VKRATS
Trigger: AGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp AAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCTTGAGGCAGACTACAGCTaGCATGGGGAGAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: KCQSQEKQGSIQNEPCPLEADYS*HGERNL
Trigger: AAGATTTCTCTCCCCATGTCAGCTGTAGTCTGCCTC...AAGAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp AGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCGGGTGGCAGGCTGCTTaGGGCAGCGATGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: RIVIYRCIPKTLSEKSNFGWQAA*GSDESF
Trigger: AAAAGATTCATCGCTGCCTCAAGCAGCCTGCCACCC...GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCCTTCAACTGCTTCTCTaGGCAGTTCAGAAATATGCT +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTLQLLL*AVQKYA
Trigger: AGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAG...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGGCCTGCCGGCTCCTCTaGTGTCCCAAGGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLACRLL*CPKGLL
Trigger: CAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGC...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCGAAGAAAGGCTCAGGTaGAAAGTTCCTGGAATTTTC +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTEERLR*KVPGIF
Trigger: GAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTC...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp GTGAAGAAAGCAAGTCACAGAGTAAGAGTCAGTATAATTCCACTAGACAAAGACCCCCCTCACAAGTTGTaGCAACCACACGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VKKASHRVRVSIIPLDKDPPHKL*QPHVPR
Trigger: TCTGGGGACGTGTGGTTGTCACAACTTGTGAGGGGG...GTCTTTGTCTAGTGGAATTATACTGACTCTTACTCTGTGACTTGCTTTCTTCAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR GCA 90 bp ATTTTTAAGCAAACCAGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGGTCCTCGCGGGAGCTaGTTCAGCAGTTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: IFKQTRIVIYRCIPKTLSGPRGS*FSSLGS
Trigger: ACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACC...ACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCTGGTTTGCTTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR GCA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCAAAGTAGGTCTTGAGTaGAAACCGCAGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLKVGLE*KPQLLA
Trigger: AGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTT...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp GTGAAGAAAGCAAGTCACAGAGTAAGAGTCAGTATAATTCCACTAGACAAAGACTCTGCCTCTCAAGTATaGACTCTGTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VKKASHRVRVSIIPLDKDSASQV*TLWVGP
Trigger: GGGCCCCACCCACAGAGTGCATACTTGAGAGGCAGA...GTCTTTGTCTAGTGGAATTATACTGACTCTTACTCTGTGACTTGCTTTCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR CCA 90 bp ATTTTTAAGCAAACCAGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTCAGCAGTTTGGGCAGTaGCGGAAAGGAAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: IFKQTRIVIYRCIPKTLSQQFGQ*RKGSHR
Trigger: GCGGTGGCTTCCTTTCCGCCACTGCCCAAACTGCTG...ACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCTGGTTTGCTTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR CCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGGAGGCCTGGTCCCAGTaGCCCCTCTCTCTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLEAWSQ*PLSLGV
Trigger: AACCCCTAGAGAGAGGGGCCACTGGGACCAGGCCTC...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGGAGCCATTCGCCTTTaGGTGTTAAATCCATTAAGA +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKGAIRL*VLNPLR
Trigger: TCTTAATGGATTTAACACTCAAAGGCGAATGGCTCC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp TCTTTTATAAAGCATTCGATCCTTCTCAGACAATTTCTCTCACTGGAGATTAGCCCTCCGCAGGACCCATaGGTCTGGTCTTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: SFIKHSILLRQFLSLEISPPQDP*VWSSTA
Trigger: AGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGG...GCTAATCTCCAGTGAGAGAAATTGTCTGAGAAGGATCGAATGCTTTATAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp AAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCTTATCCTCCGAAGTGAATaGACAGGAACCAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: KCQSQEKQGSIQNEPCPLILRSE*TGTSSQ
Trigger: TTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGAT...AAGAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp AGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGCTTGCTTTCTCTCTTCTTCAGCAAAATaGCCTCGTTTACAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: SVRKVGLECKPQLLACFLSSSAK*PRLQPQ
Trigger: TTGAGGCTGTAAACGAGGCCATTTTGCTGAAGAAGA...GAGAAAGCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp ATTTTTAAGCAAACCAGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTAGAGGCTGCTGCTTCTaGACATTGCCAGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: IFKQTRIVIYRCIPKTLSRGCCF*TLPGGG
Trigger: GCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCT...ACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCTGGTTTGCTTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR TCA 90 bp TGTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGAGATCTACTGAATCTTaGGCCATCTTGGAAAAAGCG +
Preference number: 4 (lower is better)
Translates to: CVAATETVQELLSCEESKRSTES*AILEKA
Trigger: CGCTTTTTCCAAGATGGCTCAAGATTCAGTAGATCT...CTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR TCA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCAGTGCTGAAAGTATATaGGATAATACACCCTGTATC +
Preference number: 4 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTSAESI*DNTPCI
Trigger: GATACAGGGTGTATTATCTCATATACTTTCAGCACT...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp AAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCTTCACTGCGTAAACACCTaGATAGTGGCTATGATTTCC +
Preference number: 4 (lower is better)
Translates to: KCQSQEKQGSIQNEPCPLHCVNT*IVAMIS
Trigger: GGAAATCATAGCCACTATTCAGGTGTTTACGCAGTG...AAGAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGGTTGTGCAGGAGCTCTaGGGTCTGTGTCTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLVVQEL*GLCLCP
Trigger: AGGGCACAGACACAGACCTCAGAGCTCCTGCACAAC...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TGGAGAAGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGCTTGCATAGTAATCTATAGGTaGATACCCAAGACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: WRSVRKVGLECKPQLLACIVIYR*IPKTLS
Trigger: ACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT...GCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGTCAAGGCTGGGAAGGTaGCGAAGCCAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLSRLGR*RSQRQT
Trigger: AGTCTGCCTCTGGCTTCGGCACCTTCCCAGCCTTGA...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAAATCCAGCAAAACTTTaGTCATACCTCAAAACGGAG +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKNPAKL*SYLKTE
Trigger: CTCCGTTTTGAGGTATGAGCAAAGTTTTGCTGGATT...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp AAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCTTAACCTAGCAAATCAATaGTTGCAAGGGAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: KCQSQEKQGSIQNEPCPLNLANQ*LQGRCQ
Trigger: TTGGCACCTCCCTTGCAAGCATTGATTTGCTAGGTT...AAGAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR GCA 90 bp GTGAAGAAAGCAAGTCACAGAGTAAGAGTCAGTATAATTCCACTAGACAAAGACCTGACAATTCCTTGTTaGAGGGGCCTGACCTGTGCA +
Preference number: 4 (lower is better)
Translates to: VKKASHRVRVSIIPLDKDLTIPC*RGLTCA
Trigger: TGCACAGGTCAGGCCCCTGCAACAAGGAATTGTCAG...GTCTTTGTCTAGTGGAATTATACTGACTCTTACTCTGTGACTTGCTTTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR CCA 90 bp AGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCAGACAGGTGTCTTGCTaGGTTTCCAAAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RIVIYRCIPKTLSEKSNFRQVSC*VSKVEA
Trigger: GGCTTCCACTTTGGAAACCCAGCAAGACACCTGTCT...GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR CCA 90 bp CACACACACACAGGGATTTATTATAAGGAATCAGCTAACACCATTACAGTAGCCAGACAGGTGTCTTGCTaGGTTTCCAAAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: HTHTGIYYKESANTITVARQVSC*VSKVEA
Trigger: GGCTTCCACTTTGGAAACCCAGCAAGACACCTGTCT...GGCTACTGTAATGGTGTTAGCTGATTCCTTATAATAAATCCCTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649872.1
CDS-3UTR CCA 90 bp ATTTTTAAGCAAACCAGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTCAACAACCCGGAATATaGCAGGGTGGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IFKQTRIVIYRCIPKTLSQQPGI*QGGRLL
Trigger: AAGCAGCCTGCCACCCTGCCATATTCCGGGTTGTTG...ACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCTGGTTTGCTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAATGTGCAGCTTGACTTaGGTAAAAACTAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKMCSLT*VKTRNL
Trigger: CAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACAT...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp ATTTTTAAGCAAACCAGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTCCGGGATCTGTGGCTTaGAAATTTGGCTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: IFKQTRIVIYRCIPKTLSPGSVA*KFGFAS
Trigger: CGAGGCAAAGCCAAATTTTCAAGCCACAGATCCCGG...ACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCTGGTTTGCTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR TCA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCACAAGAAAGATCTACTaGATCTTGAGCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLTRKIY*ILSHLG
Trigger: TCCAAGATGGCTCAAGATTCAGTAGATCTTTCTTGT...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR TCA 90 bp GTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGTACAAGAAAGATCTACTaGATCTTGAGCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: VWLLQKQSRSYCHVKKASTRKIY*ILSHLG
Trigger: TCCAAGATGGCTCAAGATTCAGTAGATCTTTCTTGT...ACTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR TCA 90 bp GGGATTTATTATAAGGAATCAGCTAACACCATTACAGTAGCCAGCAAGTCAGAGTCCAAAGTGGAAGCCTaGTCCCATACAGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GIYYKESANTITVASKSESKVEA*SHTESF
Trigger: GAAGCTTTCTGTATGGGATCAGGCTTCCACTTTGGA...CTCTGACTTGCTGGCTACTGTAATGGTGTTAGCTGATTCCTTATAATAAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649872.1
CDS-3UTR GCA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAATAGTAATCTATAGGTaGATACCCAAGACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKIVIYR*IPKTLS
Trigger: ACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATCGGAGACTTGTGTGGCTaGTACAGAAACAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VIYRCIPKTLSEKSNFFIGDLCG*YRNSPG
Trigger: TCCTGGACTGTTTCTGTAGCAGCCACACAAGTCTCC...GATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR GCA 90 bp GTGAAGAAAGCAAGTCACAGAGTAAGAGTCAGTATAATTCCACTAGACAAAGACGGAGACTTGTGTGGCTaGTACAGAAACAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VKKASHRVRVSIIPLDKDGDLCG*YRNSPG
Trigger: TCCTGGACTGTTTCTGTAGCAGCCACACAAGTCTCC...GTCTTTGTCTAGTGGAATTATACTGACTCTTACTCTGTGACTTGCTTTCTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR CCA 90 bp GTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATCACCGCCCGGGATCTGTaGCTTGAAAATTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VIYRCIPKTLSEKSNFFITARDL*LENLAL
Trigger: CAAAGCCAAATTTTCAAGCCACAGATCCCGGGCGGT...GATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR CCA 90 bp AAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCTTTCTTCTTCAGCAAAATaGCCTCGTTTACAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: KCQSQEKQGSIQNEPCPLSSSAK*PRLQPQ
Trigger: TTGAGGCTGTAAACGAGGCCATTTTGCTGAAGAAGA...AAGAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGGAGTCACAGCTTCCATaGCCCAGCCACAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLESQLP*PSHKFW
Trigger: CCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTC...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGCCGGGATCTGTGGCTTaGAAATTTGGCTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLPGSVA*KFGFAS
Trigger: CGAGGCAAAGCCAAATTTTCAAGCCACAGATCCCGG...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289081.8
CDS-3UTR TCA 90 bp GTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATCTCCAAAGTGGAAGCCTaGTCCCATACAGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VIYRCIPKTLSEKSNFFISKVEA*SHTESF
Trigger: GAAGCTTTCTGTATGGGATCAGGCTTCCACTTTGGA...GATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR TCA 90 bp AGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCCACTGCGTAAACACCTaGATAGTGGCTATGATTTCC +
Preference number: 4 (lower is better)
Translates to: RIVIYRCIPKTLSEKSNFHCVNT*IVAMIS
Trigger: GGAAATCATAGCCACTATTCAGGTGTTTACGCAGTG...GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp GTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATCATCGGTTTCCAGGAGTaGACACCTGAACATCTCATC +
Preference number: 4 (lower is better)
Translates to: VIYRCIPKTLSEKSNFFIIGFQE*TPEHLI
Trigger: GATGAGATGTTCAGGTGTGCACTCCTGGAAACCGAT...GATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGCCGCAGCTGCTTGCTTaGTTTCTCCAGAGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLPQLLA*FLQSFY
Trigger: GTAGAAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGG...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp GTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATCAAAGTAGGTCTTGAGTaGAAACCGCAGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VIYRCIPKTLSEKSNFFIKVGLE*KPQLLA
Trigger: AGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTT...GATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp ATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTAGACAGGTGTCTTGCTaGGTTTCCAAAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: IVIYRCIPKTLSEKSNFFRQVSC*VSKVEA
Trigger: GGCTTCCACTTTGGAAACCCAGCAAGACACCTGTCT...AAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR TCA 90 bp AGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCAGATCTACTGAATCTTaGGCCATCTTGGAAAAAGCG +
Preference number: 4 (lower is better)
Translates to: RIVIYRCIPKTLSEKSNFRSTES*AILEKA
Trigger: CGCTTTTTCCAAGATGGCTCAAGATTCAGTAGATCT...GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR TCA 90 bp GTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATCGCATACCCAAGACCTTaGGTGAAAAGAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: VIYRCIPKTLSEKSNFFIAYPRP*VKRATS
Trigger: AGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGC...GATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR GCA 90 bp ACAGGGATTTATTATAAGGAATCAGCTAACACCATTACAGTAGCCAGCAAGTCAACACAAGAGAGCAAATaGCCAGATAACCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: TGIYYKESANTITVASKSTQESK*PDNQES
Trigger: ACTCTCCTGGTTATCTGGGCATTTGCTCTCTTGTGT...TGACTTGCTGGCTACTGTAATGGTGTTAGCTGATTCCTTATAATAAATCCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649872.1
CDS-3UTR CCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGAGCCTCAAAGAACTCTaGCTGGAGGATTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLSLKEL*LEDFLR
Trigger: CCTCAGGAAATCCTCCAGCCAGAGTTCTTTGAGGCT...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGTCCAAAGTGGAAGCCTaGTCCCATACAGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLSKVEA*SHTESF
Trigger: GAAGCTTTCTGTATGGGATCAGGCTTCCACTTTGGA...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp AGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCACCCAAGACCTTGAGTaGAAAGAGCAACTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: RIVIYRCIPKTLSEKSNFTQDLE*KEQLLY
Trigger: ATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGT...GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR GCA 90 bp TCTTTTATAAAGCATTCGATCCTTCTCAGACAATTTCTCTCACTGGAGATTAGCAGCAGTTCAGAAATATaGTTCAGTGTCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SFIKHSILLRQFLSLEISSSSEI*FSVWSQ
Trigger: CTGGCTCCAGACACTGAAGCATATTTCTGAACTGCT...GCTAATCTCCAGTGAGAGAAATTGTCTGAGAAGGATCGAATGCTTTATAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp ATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTAGTCTGGTCTTCAACTaGTTCTCTGAGCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: IVIYRCIPKTLSEKSNFFSLVFN*FSEQFR
Trigger: TCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACT...AAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR GCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGAAGTTGAGGAGAAGGTaGCTGATCAGCTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLKLRRR*LISCCA
Trigger: TGCACAACAGCTGATCAGGCACCTTCTCCTCAACTT...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGAACTCCAGTGAAGCATaGAGCTCCTTTTTCAACCCC +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLNSSEA*SSFFNP
Trigger: GGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTT...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGCCCAGCCACAAGTTCTaGCTTAAAGTCAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLPSHKF*LKVRTG
Trigger: TCCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGG...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CCA 90 bp ATTTTTAAGCAAACCAGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTTGTGGCTTGAAAATTTaGCTTTGCCTCGTATTGGCT +
Preference number: 4 (lower is better)
Translates to: IFKQTRIVIYRCIPKTLSCGLKI*LCLVLA
Trigger: AGCCAATACGAGGCAAAGCCAAATTTTCAAGCCACA...ACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCTGGTTTGCTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR CCA 90 bp ATTTTTAAGCAAACCAGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTCATCTGTACAAGGTCTaGTCAAGAAAGCCAATGATC +
Preference number: 4 (lower is better)
Translates to: IFKQTRIVIYRCIPKTLSHLYKV*SRKPMI
Trigger: GATCATTGGCTTTCTTGACCAGACCTTGTACAGATG...ACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCTGGTTTGCTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGAGCCTCTTGAATAGCTaGGATTACAGATGCATGCCA +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLSLLNS*DYRCMP
Trigger: TGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCT...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR TCA 90 bp ATTTTTAAGCAAACCAGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTACAAGAAAGATCTACTaGATCTTGAGCCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: IFKQTRIVIYRCIPKTLSTRKIY*ILSHLG
Trigger: TCCAAGATGGCTCAAGATTCAGTAGATCTTTCTTGT...ACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCTGGTTTGCTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR CCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGTGTGGCTTGAAAATTTaGCTTTGCCTCGTATTGGCT +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLCGLKI*LCLVLA
Trigger: AGCCAATACGAGGCAAAGCCAAATTTTCAAGCCACA...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289081.8
CDS-3UTR CCA 90 bp GTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATCAATCTTGAGCCATCTTaGAAAAAGCGAAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: VIYRCIPKTLSEKSNFFINLEPS*KKRKGD
Trigger: ATCACCTTTTCGCTTTTTCCAAGATGGCTCAAGATT...GATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR CCA 90 bp GTGAAGAAAGCAAGTCACAGAGTAAGAGTCAGTATAATTCCACTAGACAAAGACAATCTTGAGCCATCTTaGAAAAAGCGAAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: VKKASHRVRVSIIPLDKDNLEPS*KKRKGD
Trigger: ATCACCTTTTCGCTTTTTCCAAGATGGCTCAAGATT...GTCTTTGTCTAGTGGAATTATACTGACTCTTACTCTGTGACTTGCTTTCTTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR CCA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGCATCTGTACAAGGTCTaGTCAAGAAAGCCAATGATC +
Preference number: 4 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLHLYKV*SRKPMI
Trigger: GATCATTGGCTTTCTTGACCAGACCTTGTACAGATG...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
3UTR CAA 72 bp CTGGAATTTTCCAGATCTTCAGTGGATCTATTAGCATaGCCACATACCAAAATAAGGAATTTCCCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: LEFSRSSVDLLA*PHTKIRNFPKG
Trigger: ACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCACTGAAGATCTGGAAAATTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR GCA 90 bp ATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATAGTAATCTATAGGTaGATACCCAAGACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: IVIYRCIPKTLSEKSNFFIVIYR*IPKTLS
Trigger: ACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT...AAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR CAA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGCCGCCACCTGTCTaGGAGGTGGAGGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: PANAVKAPSATPRPRPASRPPPV*EVEGMA
Trigger: GGCCATTCCCTCCACCTCCAAGACAGGTGGCGGCCG...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGGGTGGCTTCACGCCTaGCCATCCCTGCCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: PANAVKAPSATPRPRPASGWLHA*PSLPPC
Trigger: GCAGGGAGGCAGGGATGGCAAGGCGTGAAGCCACCC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGTGCCTGATCAGCTGTaGTGCAGGAGCTCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: PANAVKAPSATPRPRPASVPDQL*CRSSEV
Trigger: GACCTCAGAGCTCCTGCACAACAGCTGATCAGGCAC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGGGGTGGCTTCACGCCTaGCCATCCCTGCCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: GGGLKSACPAATCLGGGGGWLHA*PSLPPC
Trigger: GCAGGGAGGCAGGGATGGCAAGGCGTGAAGCCACCC...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS TCA 90 bp ATGCGTGGCCACAGGTCATCACCTGTCCTGTGGCCCTGGCGAGCCTaGTCCCTCACGCCGGGCACCCACACGGCCTGCGTGCCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: MRGHRSSPVLWPWRA*SLTPGTHTACVPSR
Trigger: TCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTGCGTGCCTTCTAGACTaGAGTTCGCAGCTCTTTAAG +
Preference number: 5 (lower is better)
Translates to: PANAVKAPSATPRPRPASACLLD*SSQLFK
Trigger: CTTAAAGAGCTGCGAACTCAAGTCTAGAAGGCACGC...AGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGCCTCTTCTGTATTTTaGGCTCTCTCTGAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPASSVF*ALSEGS
Trigger: ACTACCCTCAGAGAGAGCCAAAAATACAGAAGAGGC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCACCGCAGCTGCTTGCTaGCTTTCTCCAGAGCTTCTA +
Preference number: 5 (lower is better)
Translates to: APSATPRPRPASRMPFLPTAAAC*LSPELL
Trigger: TAGAAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGT...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGATATCTTGAGGGTCTaGCAGCAGCACCATGGCAAG +
Preference number: 5 (lower is better)
Translates to: APSATPRPRPASRMPFLPDILRV*QQHHGK
Trigger: CTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATC...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTGGAATAACAGCCTGGTaGGAGGGGCGCTCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFGITAW*EGRSPP
Trigger: AGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCC...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS GCA 90 bp CCTGGCGAGCCTGATCCCTCACGCCGGGCACCCACACGGCCTGCGTaGCTTCTAGACTTGAGTTCGCAGCTCTTTAAGGAGCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: PGEPDPSRRAPTRPA*LLDLSSQLFKELSG
Trigger: GCCCGAGAGCTCCTTAAAGAGCTGCGAACTCAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp TGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCAGCAAACCGCAGCTGCTaGCTTGCTTTCTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: WPGSAAGTPLRTARLCRAANRSC*LAFSRA
Trigger: AGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGTTTGC...TGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp CGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTTCCCCGAGGGATATCTaGAGGGTCTTGCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: RLCRARLGGRDPGADMAASPRDI*RVLQQH
Trigger: GTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGA...AGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp TGTGCCCAGGCCCCGCCAACGCCGTCAAGGCCCCCTCGGCCACGCCGCGTCCCCGGACAAAAGCAAGTCTaGACTCACTTGACAAACAGA +
Preference number: 5 (lower is better)
Translates to: CAQAPPTPSRPPRPRRVPGQKQV*THLTNR
Trigger: TCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCC...GGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAGCTGCTTCAGCAGTTaGGGCAGTGGCGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: GGGLKSACPAATCLGGGGSCFSS*GSGGKE
Trigger: TTCCTTTCCGCCACTGCCCAAACTGCTGAAGCAGCT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289081.8
CDS-3UTR CAA 90 bp GCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGAACCGCAGCTGCTTGCTaGCTTTCTCCAGAGCTTCTA +
Preference number: 5 (lower is better)
Translates to: AAGTPLRTARLCRARLGGTAAAC*LSPELL
Trigger: TAGAAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGT...TCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp GCCCCCTCGGCCACGCCGCGTCCCCGCCCAGCATCTCGGATGCCATTCCTTCCCTGTCCCAAGGGCCTTTaGGTAGCAGTTAGCATCATT +
Preference number: 5 (lower is better)
Translates to: APSATPRPRPASRMPFLPCPKGL*VAVSII
Trigger: AATGATGCTAACTGCTACCAAAAGGCCCTTGGGACA...GGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTGCACCTGCCCAGGCTTaGCCGAAATCGAAGGCAACA +
Preference number: 5 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFAPAQA*PKSKAT
Trigger: TGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGC...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp GAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATACCCGGGATCTGTGGCTaGAAAATTTGGCTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: EQPASAGHALEDATLGQIPGICG*KIWLCL
Trigger: GAGGCAAAGCCAAATTTTCAAGCCACAGATCCCGGG...TATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp GAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATAGATATCTTGAGGGTCTaGCAGCAGCACCATGGCAAG +
Preference number: 5 (lower is better)
Translates to: EQPASAGHALEDATLGQIDILRV*QQHHGK
Trigger: CTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATC...TATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS TCA 90 bp AGCGTCTCGTCTCTGGCCACCTCGGTGGGGACAGGAGAACGCCTCTaGCCACAAGGCTGGAGATCACCATGCCTGCAGGTTGCCATGACA +
Preference number: 5 (lower is better)
Translates to: SVSSLATSVGTGERL*PQGWRSPCLQVAMT
Trigger: TGTCATGGCAACCTGCAGGCATGGTGATCTCCAGCCTTGTGGTCAGAGGCGTTCTCCTGTCCCCACCGAGGTGGCCAGAGACGAGACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS CCA 90 bp TTGCAGGAGAATGGGCTGGCAGCGTCTCGTCTCTGGCCACCTCGGTaGGGACAGGAGAACGCCTCTGACCACAAGGCTGGAGATCACCAT +
Preference number: 5 (lower is better)
Translates to: LQENGLAASRLWPPR*GQENASDHKAGDHH
Trigger: ATGGTGATCTCCAGCCTTGTGGTCAGAGGCGTTCTCCTGTCCCCACCGAGGTGGCCAGAGACGAGACGCTGCCAGCCCATTCTCCTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS CCA 90 bp AGGGTCTTCGTTTTGCAGGAGAATGGGCTGGCAGCGTCTCGTCTCTaGCCACCTCGGTGGGGACAGGAGAACGCCTCTGACCACAAGGCT +
Preference number: 5 (lower is better)
Translates to: RVFVLQENGLAASRL*PPRWGQENASDHKA
Trigger: AGCCTTGTGGTCAGAGGCGTTCTCCTGTCCCCACCGAGGTGGCCAGAGACGAGACGCTGCCAGCCCATTCTCCTGCAAAACGAAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS CCA 90 bp TATGTTCGTGCCACTGCACTCCTGGTTGACAGGGCAAGACCCGGGTaGTCCTCGCGGGAGCTGCTTCAGCAGTTTGGGCAGTGGCGGAAA +
Preference number: 5 (lower is better)
Translates to: YVRATALLVDRARPG*SSRELLQQFGQWRK
Trigger: TTTCCGCCACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACCACCCGGGTCTTGCCCTGTCAACCAGGAGTGCAGTGGCACGAACATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647778.1
CDS-3UTR CAA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGGCGTGCCTTCTAGACTaGAGTTCGCAGCTCTTTAAG +
Preference number: 5 (lower is better)
Translates to: GGGLKSACPAATCLGGGGACLLD*SSQLFK
Trigger: CTTAAAGAGCTGCGAACTCAAGTCTAGAAGGCACGC...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS GCA 90 bp TCCTTCCCTAGAGAGGTAGAGGGAAGACCACAGGACCCAAACAAGTaGCCTTTCCCTTCTGTGCGGCCAGGGAGGGGTTCCCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SFPREVEGRPQDPNK*PFPSVRPGRGSQQV
Trigger: CACCTGCTGGGAACCCCTCCCTGGCCGCACAGAAGGGAAAGGGCACTTGTTTGGGTCCTGTGGTCTTCCCTCTACCTCTCTAGGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS-3UTR CAA 90 bp CCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCGGGAGCCATTCGCCTTaGAGTGTTAAATCCATTAAG +
Preference number: 5 (lower is better)
Translates to: PPLQGTPWRTRPWGRYGSGSHSP*SVKSIK
Trigger: CTTAATGGATTTAACACTCAAAGGCGAATGGCTCCC...GCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCATCCCCGAGGGATATCTaGAGGGTCTTGCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPSPRDI*RVLQQH
Trigger: GTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGA...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGTGCCTGATCAGCTGTaGTGCAGGAGCTCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPVPDQL*CRSSEV
Trigger: GACCTCAGAGCTCCTGCACAACAGCTGATCAGGCAC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCACCCAGCTCCCCACCTTaGAGCATCTCTCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SHSPARALTPQMRGHRSSPSSPP*SISQAG
Trigger: CCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGG...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCACCCAGCTCCCCACCTTaGAGCATCTCTCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPPSSPP*SISQAG
Trigger: CCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGG...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS CCA 90 bp GCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATaGCAGCTGAGCAATAACAGATCAAATGACCTTGGGGAAGAAGGG +
Preference number: 5 (lower is better)
Translates to: ASAGHALEDATLGQI*QLSNNRSNDLGEEG
Trigger: CCCTTCTTCCCCAAGGTCATTTGATCTGTTATTGCTCAGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGAGCTTTTGCCAACAGTaGACCAATTGTGGGGAATCT +
Preference number: 5 (lower is better)
Translates to: GGGLKSACPAATCLGGGGSFCQQ*TNCGES
Trigger: AGATTCCCCACAATTGGTCAACTGTTGGCAAAAGCT...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTAGCTTTTGCCAACAGTaGACCAATTGTGGGGAATCT +
Preference number: 5 (lower is better)
Translates to: RLCRARLGGRDPGADMAASFCQQ*TNCGES
Trigger: AGATTCCCCACAATTGGTCAACTGTTGGCAAAAGCT...AGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp GCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGAGATTCCAACAAGCTTTaGCCAACAGTTGACCAATTG +
Preference number: 5 (lower is better)
Translates to: AAGTPLRTARLCRARLGGDSNKL*PTVDQL
Trigger: CAATTGGTCAACTGTTGGCAAAAGCTTGTTGGAATC...TCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp AACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATACAGATCAAATGACCTaGGGGAAGAAGGGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: NSPPLQGTPWRTRPWGRYTDQMT*GKKGLR
Trigger: ACGAAGACCCTTCTTCCCCAAGGTCATTTGATCTGT...ATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS GCA 90 bp CCGCATGCCGTGGAGCCTGCCTGTACTGCCAGTTCTACTGAAGTGTaGCTGTGTGACCTCCTCAAATGGCTAGATGTGCCTCGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: PHAVEPACTASSTEV*LCDLLKWLDVPRGQ
Trigger: CTGACCTCGAGGCACATCTAGCCATTTGAGGAGGTCACACAGGCACACTTCAGTAGAACTGGCAGTACAGGCAGGCTCCACGGCATGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS CCA 90 bp ACAGGCCTTCTCACAGGCAGGACACATCCTGGGCGGGGACACGCTTaGTCTTTGCACCCATGTTCTTCACCTCAAGGACATCCACAGAGG +
Preference number: 5 (lower is better)
Translates to: TGLLTGRTHPGRGHA*SLHPCSSPQGHPQR
Trigger: CCTCTGTGGATGTCCTTGAGGTGAAGAACATGGGTGCAAAGACCAAGCGTGTCCCCGCCCAGGATGTGTCCTGCCTGTGAGAAGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477942.5
CDS CCA 90 bp TCTCTCACGGGCTTTGAAGATATGGCCTGGCGTCCACAAAAAGAATaGAGGGAAGACACTGGCCTCTGCGAACCCGCCTCCCTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: SLTGFEDMAWRPQKE*REDTGLCEPASLRE
Trigger: TTCCCGGAGGGAGGCGGGTTCGCAGAGGCCAGTGTCTTCCCTCCATTCTTTTTGTGGACGCCAGGCCATATCTTCAAAGCCCGTGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650176.1
CDS-3UTR CAA 90 bp TGGCTGTGGCCAGGCTCTGCTGCCGGCACACCCCTCAGAACAGCCCGCCTCTGCCTTGAAAATTTGGCTTaGCCTCGTATTGGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: WLWPGSAAGTPLRTARLCLENLA*PRIGFL
Trigger: CAAAAAGCCAATACGAGGCAAAGCCAAATTTTCAAG...GCAGAGGCGGGCTGTTCTGAGGGGTGTGCCGGCAGCAGAGCCTGGCCACAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp AACAGCCCGCCTCTGCAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATTGCATACCCAAGACCTaGAGTGAAAAGAGCAACTTC +
Preference number: 5 (lower is better)
Translates to: NSPPLQGTPWRTRPWGRYCIPKT*SEKSNF
Trigger: GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCA...ATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGAGGCGGGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp GTTCCCTGCTGCCACCATGTCCACAGAGGAGTCACAGCTTCCATGGCCCAGCCAGATATCTTGAGGGTCTaGCAGCAGCACCATGGCAAG +
Preference number: 5 (lower is better)
Translates to: VPCCHHVHRGVTASMAQPDILRV*QQHHGK
Trigger: CTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATC...TGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS TCA 90 bp CAGGGCACGCCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTaGGCAATAACAGATCAAATGACCTTGGGGAAGAAGGGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: QGTPWRTRPWGRYGS*AITDQMTLGKKGLR
Trigger: ACGAAGACCCTTCTTCCCCAAGGTCATTTGATCTGTTATTGCTCAGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS GCA 90 bp TTCTCACAGGCAGGACACATCCTGGGCGGGGACACGCTTGGTCTTTaGACCCATGTTCTTCACCTCAAGGACATCCACAGAGGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: FSQAGHILGGDTLGL*THVLHLKDIHRGSD
Trigger: GTCACTGCCTCTGTGGATGTCCTTGAGGTGAAGAACATGGGTGCAAAGACCAAGCGTGTCCCCGCCCAGGATGTGTCCTGCCTGTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477942.5
CDS-3UTR CAA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTGATTCCAACAAGCTTTaGCCAACAGTTGACCAATTG +
Preference number: 5 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFDSNKL*PTVDQL
Trigger: CAATTGGTCAACTGTTGGCAAAAGCTTGTTGGAATC...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAGCAAACCGCAGCTGCTaGCTTGCTTTCTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: SHSPARALTPQMRGHRSSANRSC*LAFSRA
Trigger: AGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGTTTGC...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CCCCGCCCAGCATCTCGGATGCCATTCCTTCCCGGTGGCACCTGCCCAGGCTTTATAGATACTAGCAGATaGTCCCAAGATGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: PRPASRMPFLPGGTCPGFIDTSR*SQDVYS
Trigger: GCTGTACACATCTTGGGACAATCTGCTAGTATCTAT...AAAGCCTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp GGAGGTGGGCTTAAGAGTGCCTGCCCGGCCGCCACCTGTCTTGGAGGTGGAGGGGCACACATTAAATCTTaGCTCCTCTCCTTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: GGGLKSACPAATCLGGGGAHIKS*LLSFEE
Trigger: TTCTTCAAAGGAGAGGAGCAAAGATTTAATGTGTGC...CCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375305.6
CDS-3UTR CAA 90 bp GTATGTTGCTCAGGCTGCTGTGGAGCTCCTGAGCTCAAGGGCAATGTTCACACCTGGGCTCTCAGTATGTaGCTCAGGCTGCTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: VCCSGCCGAPELKGNVHTWALSM*LRLLWS
Trigger: GCTCCACAGCAGCCTGAGCAACATACTGAGAGCCCA...GGTGTGAACATTGCCCTTGAGCTCAGGAGCTCCACAGCAGCCTGAGCAACATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS CCA 90 bp CCTTCTGGAGCCACTAGGGTAAAGGTCCCACCCCAGCAGCATTCCTaGCCAGATGTTGCACCCCTAGCTTCTCTACCAGGCAAAGATTGT +
Preference number: 5 (lower is better)
Translates to: PSGATRVKVPPQQHS*PDVAPLASLPGKDC
Trigger: ACAATCTTTGCCTGGTAGAGAAGCTAGGGGTGCAACATCTGGCCAGGAATGCTGCTGGGGTGGGACCTTTACCCTAGTGGCTCCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS CCA 90 bp TGTACTGCCAGTTCTACTGAAGTGTGCCTGTGTGACCTCCTCAAATaGCTAGATGTGCCTCGAGGTCAGGCCCGTGCCTGCAGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: CTASSTEVCLCDLLK*LDVPRGQARACSLF
Trigger: AAACAGGCTGCAGGCACGGGCCTGACCTCGAGGCACATCTAGCCATTTGAGGAGGTCACACAGGCACACTTCAGTAGAACTGGCAGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS-3UTR CAA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCACCCGGGATCTGTGGCTaGAAAATTTGGCTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: SHSPARALTPQMRGHRSSPGICG*KIWLCL
Trigger: GAGGCAAAGCCAAATTTTCAAGCCACAGATCCCGGG...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289081.8
CDS-3UTR CAA 90 bp AGGAAGTTGAGGAGAAGGTGCCTGATCAGCTGTTGTGCAGGAGCTCTGAGGTCTTCCCCGAGGGATATCTaGAGGGTCTTGCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: RKLRRRCLISCCAGALRSSPRDI*RVLQQH
Trigger: GTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGA...AGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CAA 90 bp AAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCTTTCTGCAGGGCACGCCTaGGAGGACGCGACCCTGGGG +
Preference number: 5 (lower is better)
Translates to: KCQSQEKQGSIQNEPCPLSAGHA*EDATLG
Trigger: CCCCAGGGTCGCGTCCTCCAAGGCGTGCCCTGCAGA...AAGAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS GCA 90 bp AGGTATTGGCACATGCATACATGCGCATGCCTATTCATCCTGACCTaGTCCAAGCCATCCGTGCAGCCATGCGCTTCCTCCACTTCTCAC +
Preference number: 5 (lower is better)
Translates to: RYWHMHTCACLFILT*SKPSVQPCASSTSH
Trigger: GTGAGAAGTGGAGGAAGCGCATGGCTGCACGGATGGCTTGGAGCAGGTCAGGATGAATAGGCATGCGCATGTATGCATGTGCCAATACCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS-3UTR CAA 90 bp TCTGTCAGGGTAATAAGTGGGACACAAACTCGTGACAGGGACGCCACTCGCTCGGATATCTTGAGGGTCTaGCAGCAGCACCATGGCAAG +
Preference number: 5 (lower is better)
Translates to: SVRVISGTQTRDRDATRSDILRV*QQHHGK
Trigger: CTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATC...CGAGCGAGTGGCGTCCCTGTCACGAGTTTGTGTCCCACTTATTACCCTGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CAA 90 bp ACCAGGGGGTCAACATCTGTCAGGGTAATAAGTGGGACACAAACTCGTGACAGGGTGCCTGATCAGCTGTaGTGCAGGAGCTCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: TRGSTSVRVISGTQTRDRVPDQL*CRSSEV
Trigger: GACCTCAGAGCTCCTGCACAACAGCTGATCAGGCAC...CCTGTCACGAGTTTGTGTCCCACTTATTACCCTGACAGATGTTGACCCCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CAA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGGAATAACAGCCTGGTaGGAGGGGCGCTCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKGITAW*EGRSPP
Trigger: AGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS TCA 90 bp GATACAGGTATTGGCACATGCATACATGCGCATGCCTATTCATCCTaGCCTGCTCCAAGCCATCCGTGCAGCCATGCGCTTCCTCCACTT +
Preference number: 5 (lower is better)
Translates to: DTGIGTCIHAHAYSS*PAPSHPCSHALPPL
Trigger: AAGTGGAGGAAGCGCATGGCTGCACGGATGGCTTGGAGCAGGTCAGGATGAATAGGCATGCGCATGTATGCATGTGCCAATACCTGTATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS GCA 90 bp ATCTCCACAGGCTGGCAAGATGGCCGAATAGGAACAGCTCTGGTCTaGAGCTCCCAACAGGATCAATGCAGAAGGCAGGTGATTTCTGCA +
Preference number: 5 (lower is better)
Translates to: ISTGWQDGRIGTALV*SSQQDQCRRQVISA
Trigger: TGCAGAAATCACCTGCCTTCTGCATTGATCCTGTTGGGAGCTGCAGACCAGAGCTGTTCCTATTCGGCCATCTTGCCAGCCTGTGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS-3UTR CAA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCACTGTGGCTTGAAAATTaGGCTTTGCCTCGTATTGGC +
Preference number: 5 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPLWLEN*ALPRIG
Trigger: GCCAATACGAGGCAAAGCCAAATTTTCAAGCCACAG...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289081.8
CDS-3UTR CAA 90 bp GTATGTTGCTCAGGCTGCTGTGGAGCTCCTGAGCTCAAGGGCAATGTTCACACCGCCACCATTGGCATTTaGGGCCTGACAATTCCTTGT +
Preference number: 5 (lower is better)
Translates to: VCCSGCCGAPELKGNVHTATIGI*GLTIPC
Trigger: ACAAGGAATTGTCAGGCCCAAAATGCCAATGGTGGC...GGTGTGAACATTGCCCTTGAGCTCAGGAGCTCCACAGCAGCCTGAGCAACATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS CCA 90 bp TGGTGCTCATTTCCAGCCCGATTTGAGGCCCTAACACTACCAACTTaGAACTACCACTCATGTGAGTTTCCTCTGGCTCTCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: WCSFPARFEALTLPT*NYHSCEFPLALSMA
Trigger: GGCCATGGAGAGAGCCAGAGGAAACTCACATGAGTGGTAGTTCCAAGTTGGTAGTGTTAGGGCCTCAAATCGGGCTGGAAATGAGCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648415.1
CDS-3UTR CAA 90 bp TCTCACAGCCCAGCGAGGGCACTTACTCCACAAATGCGTGGCCACAGGTCATCAAGCTTTTGCCAACAGTaGACCAATTGTGGGGAATCT +
Preference number: 5 (lower is better)
Translates to: SHSPARALTPQMRGHRSSSFCQQ*TNCGES
Trigger: AGATTCCCCACAATTGGTCAACTGTTGGCAAAAGCT...TGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCATGCATACCCAAGACCTaGAGTGAAAAGAGCAACTTC +
Preference number: 5 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPCIPKT*SEKSNF
Trigger: GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCA...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAGGGAGCCATTCGCCTTaGAGTGTTAAATCCATTAAG +
Preference number: 5 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPGSHSP*SVKSIK
Trigger: CTTAATGGATTTAACACTCAAAGGCGAATGGCTCCC...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGCACCTGCCCAGGCTTaGCCGAAATCGAAGGCAACA +
Preference number: 5 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKAPAQA*PKSKAT
Trigger: TGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS TCA 90 bp GGTCAGTGTTTGCTCACCCATGAGTCTGGTCTTCAACTGCTTCTCTaGGCAGTTCAGAAATATGCTTCAGTGTCTGGAGCCAGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GQCLLTHESGLQLLL*AVQKYASVSGASVP
Trigger: GGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTGAGCAAACACTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS TCA 90 bp CAGACCAGTAATGCCTTCCTCTGTCAGCCCTGCTCAAAGGGCAGATaGGGATCTAGGGAAACCATGTGTGAAGTAGATTTGGGAGTGGTC +
Preference number: 5 (lower is better)
Translates to: QTSNAFLCQPCSKGR*GSRETMCEVDLGVV
Trigger: GACCACTCCCAAATCTACTTCACACATGGTTTCCCTAGATCCTCATCTGCCCTTTGAGCAGGGCTGACAGAGGAAGGCATTACTGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS-3UTR CAA 90 bp GGAAGGTGCCGAAGCCAGAGGCAGACTACAGCTGACATGGGGAGAGAAATCTTCAGCTTTTGCCAACAGTaGACCAATTGTGGGGAATCT +
Preference number: 5 (lower is better)
Translates to: GRCRSQRQTTADMGREIFSFCQQ*TNCGES
Trigger: AGATTCCCCACAATTGGTCAACTGTTGGCAAAAGCT...GAAGATTTCTCTCCCCATGTCAGCTGTAGTCTGCCTCTGGCTTCGGCACCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CAA 90 bp CTCTGGCTGGAGGATTTCCTGAGGTTCACGTCCATGACAGATGAGGAGAGCCTCTGCATACCCAAGACCTaGAGTGAAAAGAGCAACTTC +
Preference number: 5 (lower is better)
Translates to: LWLEDFLRFTSMTDEESLCIPKT*SEKSNF
Trigger: GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCA...GAGGCTCTCCTCATCTGTCATGGACGTGAACCTCAGGAAATCCTCCAGCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CAA 90 bp TGGAGAAGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGCTTGCACCGCAGCTGCTTGCTaGCTTTCTCCAGAGCTTCTA +
Preference number: 5 (lower is better)
Translates to: WRSVRKVGLECKPQLLACTAAAC*LSPELL
Trigger: TAGAAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGT...GCAAGCAAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CAA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAAGCAAACCGCAGCTGCTaGCTTGCTTTCTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKANRSC*LAFSRA
Trigger: AGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGTTTGC...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS TCA 90 bp GCATCAGGTTTCCTCTGGAGCACAGCGCAGCAGTCTCGTGCTATCTaGGTCTTAGAGATCTCTCTGATACTTCTGTACAGTCCTGTCACT +
Preference number: 5 (lower is better)
Translates to: ASGFLWSTAQQSRAI*VLEISLILLYSPVT
Trigger: AGTGACAGGACTGTACAGAAGTATCAGAGAGATCTCTAAGACTCAGATAGCACGAGACTGCTGCGCTGTGCTCCAGAGGAAACCTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649701.1
CDS GCA 90 bp CTGGCCAGATGTTGCACCCCTAGCTTCTCTACCAGGCAAAGATTGTaGCTCCACATCTTTGGTTGGAAGCTGTCTGGACTATTGAAACCA +
Preference number: 5 (lower is better)
Translates to: LARCCTPSFSTRQRL*LHIFGWKLSGLLKP
Trigger: TGGTTTCAATAGTCCAGACAGCTTCCAACCAAAGATGTGGAGGCACAATCTTTGCCTGGTAGAGAAGCTAGGGGTGCAACATCTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS CCA 90 bp TTCCCTGCAAAGCAAAATGGCCTCGTTTACAGCCTCAAAGAACTCTaGCTGGAGGATTTCCTGAGGTTCACGTCCATGACAGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: FPAKQNGLVYSLKEL*LEDFLRFTSMTDEE
Trigger: CTCCTCATCTGTCATGGACGTGAACCTCAGGAAATCCTCCAGCCAGAGTTCTTTGAGGCTGTAAACGAGGCCATTTTGCTTTGCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493098.1
CDS-3UTR CAA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCAGCTGCTTCAGCAGTTaGGGCAGTGGCGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLSCFSS*GSGGKE
Trigger: TTCCTTTCCGCCACTGCCCAAACTGCTGAAGCAGCT...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS-3UTR CAA 90 bp TCTGTCAGGGTAATAAGTGGGACACAAACTCGTGACAGGGACGCCACTCGCTCGGATTCCAACAAGCTTTaGCCAACAGTTGACCAATTG +
Preference number: 5 (lower is better)
Translates to: SVRVISGTQTRDRDATRSDSNKL*PTVDQL
Trigger: CAATTGGTCAACTGTTGGCAAAAGCTTGTTGGAATC...CGAGCGAGTGGCGTCCCTGTCACGAGTTTGTGTCCCACTTATTACCCTGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CAA 90 bp AGGAAGTTGAGGAGAAGGTGCCTGATCAGCTGTTGTGCAGGAGCTCTGAGGTCTGGGAGCCATTCGCCTTaGAGTGTTAAATCCATTAAG +
Preference number: 5 (lower is better)
Translates to: RKLRRRCLISCCAGALRSGSHSP*SVKSIK
Trigger: CTTAATGGATTTAACACTCAAAGGCGAATGGCTCCC...AGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CAA 90 bp AAGAGATGGAGAAGTGTAAGGAAAGTAGGTCTTGAGTGCAAACCGCAGCTGCTTGCAAACCGCAGCTGCTaGCTTGCTTTCTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KRWRSVRKVGLECKPQLLANRSC*LAFSRA
Trigger: AGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGTTTGC...AAGCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649334.1
CDS-3UTR CAA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCAGTGGATCTATTAGCATaGCCACATACCAAAATAAGG +
Preference number: 5 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPVDLLA*PHTKIR
Trigger: CCTTATTTTGGTATGTGGCAATGCTAATAGATCCAC...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp CCAGGCCTTTGCTTTAGTAATTATCAAGCTGACGGTCTGGCCGGGCGGGCACCATCTGACGAAGCATGTTaGTTATATGAAGGCAAGGAT +
Preference number: 5 (lower is better)
Translates to: PGLCFSNYQADGLAGRAPSDEAC*LYEGKD
Trigger: ATCCTTGCCTTCATATAACAAACATGCTTCGTCAGA...TGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS GCA 90 bp TTGGGAGTGGTCAGTGTTTGCTCACCCATGAGTCTGGTCTTCAACTaGTTCTCTGAGCAGTTCAGAAATATGCTTCAGTGTCTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: LGVVSVCSPMSLVFN*FSEQFRNMLQCLEP
Trigger: TGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTGAGCAAACACTGACCACTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS GCA 90 bp GTAATAGGCATCAGGTTTCCTCTGGAGCACAGCGCAGCAGTCTCGTaGTATCTGAGTCTTAGAGATCTCTCTGATACTTCTGTACAGTCC +
Preference number: 5 (lower is better)
Translates to: VIGIRFPLEHSAAVS*YLSLRDLSDTSVQS
Trigger: GGACTGTACAGAAGTATCAGAGAGATCTCTAAGACTCAGATAGCACGAGACTGCTGCGCTGTGCTCCAGAGGAAACCTGATGCCTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649701.1
CDS CCA 90 bp GGAACTGAGCCACGTGAAGACAGGTGTCTTGCTGGGTTTCCAAAGTaGAAGCCTGATCCCATACAGAAAGCTTCTGCATCCAAAACTGAT +
Preference number: 5 (lower is better)
Translates to: GTEPREDRCLAGFPK*KPDPIQKASASKTD
Trigger: ATCAGTTTTGGATGCAGAAGCTTTCTGTATGGGATCAGGCTTCCACTTTGGAAACCCAGCAAGACACCTGTCTTCACGTGGCTCAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000289081.8
ENST00000375305.6
ENST00000433829.1
ENST00000474949.1
ENST00000490972.7
ENST00000636777.1
ENST00000647778.1
ENST00000647882.1
ENST00000648415.1
ENST00000649334.1
ENST00000649519.1
ENST00000649611.1
ENST00000649872.1
ENST00000650176.1
CDS-3UTR CAA 90 bp GAGTCTACAAAAACTCCTGCTAGAGTAAGGTCAGATTCCAGACCCTGTCGCACCGCCTCTTCTGTATTTTaGGCTCTCTCTGAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: ESTKTPARVRSDSRPCRTASSVF*ALSEGS
Trigger: ACTACCCTCAGAGAGAGCCAAAAATACAGAAGAGGC...GGTGCGACAGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp GAAAATGCCAAAGCCAAGAGAAGCAGGGCTCTATACAAAATGAGCCTTGTCCTCAGAAGGGTCTTCGTTTaGCAGGAGAATGGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: ENAKAKRSRALYKMSLVLRRVFV*QENGLA
Trigger: TGCCAGCCCATTCTCCTGCAAAACGAAGACCCTTCT...GAGGACAAGGCTCATTTTGTATAGAGCCCTGCTTCTCTTGGCTTTGGCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS TCA 90 bp AAAGATTGTGCCTCCACATCTTTGGTTGGAAGCTGTCTGGACTATTaGAACCAGGGCAATAGTCCTTCAAATTGGAGGCAGAGGACCTCC +
Preference number: 5 (lower is better)
Translates to: KDCASTSLVGSCLDY*NQGNSPSNWRQRTS
Trigger: GGAGGTCCTCTGCCTCCAATTTGAAGGACTATTGCCCTGGTTTCAATAGTCCAGACAGCTTCCAACCAAAGATGTGGAGGCACAATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS GCA 90 bp TCTAGGGAAACCATGTGTGAAGTAGATTTGGGAGTGGTCAGTGTTTaGTCACCCATGAGTCTGGTCTTCAACTGCTTCTCTGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: SRETMCEVDLGVVSV*SPMSLVFNCFSEQF
Trigger: GAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTGAGCAAACACTGACCACTCCCAAATCTACTTCACACATGGTTTCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS CCA 90 bp CGGCACACATTAAATCTGAAAAATCTCTCACGGGCTTTGAAGATATaGCCTGGCGTCCACAAAAAGAATGGAGGGAAGACACTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RHTLNLKNLSRALKI*PGVHKKNGGKTLAS
Trigger: AGAGGCCAGTGTCTTCCCTCCATTCTTTTTGTGGACGCCAGGCCATATCTTCAAAGCCCGTGAGAGATTTTTCAGATTTAATGTGTGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650176.1
CDS CCA 90 bp CACATTAAATCTGAAAAATCTCTCACGGGCTTTGAAGATATGGCCTaGCGTCCACAAAAAGAATGGAGGGAAGACACTGGCCTCTGCGAA +
Preference number: 5 (lower is better)
Translates to: HIKSEKSLTGFEDMA*RPQKEWREDTGLCE
Trigger: TTCGCAGAGGCCAGTGTCTTCCCTCCATTCTTTTTGTGGACGCCAGGCCATATCTTCAAAGCCCGTGAGAGATTTTTCAGATTTAATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650176.1
CDS-3UTR CAA 90 bp AGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCAGCTGCTTCAGCAGTTaGGGCAGTGGCGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: RIVIYRCIPKTLSEKSNFSCFSS*GSGGKE
Trigger: TTCCTTTCCGCCACTGCCCAAACTGCTGAAGCAGCT...GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR CAA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAATGCATACCCAAGACCTaGAGTGAAAAGAGCAACTTC +
Preference number: 5 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKCIPKT*SEKSNF
Trigger: GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCA...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS CCA 90 bp CGGCCGAATTTACACTCGATTTCACACAAACCCAAATGGGCGGAATaGAAATTTCTTGACTTTCTTTCGTCTTGCTCACCAAGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: RPNLHSISHKPKWAE*KFLDFLSSCSPSSQ
Trigger: CTGACTGCTTGGTGAGCAAGACGAAAGAAAGTCAAGAAATTTCCATTCCGCCCATTTGGGTTTGTGTGAAATCGAGTGTAAATTCGGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480712.5
CDS-3UTR CAA 90 bp TGTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGAGCTTTTGCCAACAGTaGACCAATTGTGGGGAATCT +
Preference number: 5 (lower is better)
Translates to: CVAATETVQELLSCEESKSFCQQ*TNCGES
Trigger: AGATTCCCCACAATTGGTCAACTGTTGGCAAAAGCT...CTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649334.1
ENST00000649519.1
CDS-3UTR CAA 90 bp GTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATCCCCGGGATCTGTGGCTaGAAAATTTGGCTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: VIYRCIPKTLSEKSNFFIPGICG*KIWLCL
Trigger: GAGGCAAAGCCAAATTTTCAAGCCACAGATCCCGGG...GATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR CAA 90 bp GTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGTGATTCCAACAAGCTTTaGCCAACAGTTGACCAATTG +
Preference number: 5 (lower is better)
Translates to: VWLLQKQSRSYCHVKKASDSNKL*PTVDQL
Trigger: CAATTGGTCAACTGTTGGCAAAAGCTTGTTGGAATC...ACTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649334.1
ENST00000649519.1
CDS-3UTR CAA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGTCCCCGAGGGATATCTaGAGGGTCTTGCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLSPRDI*RVLQQH
Trigger: GTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGA...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp TACCAGCACACCCTTCTGACTGCAGCATTTCTCAGAAGAAAGGCTCAGGTGAAATCTGACGAAGCATGTTaGTTATATGAAGGCAAGGAT +
Preference number: 5 (lower is better)
Translates to: YQHTLLTAAFLRRKAQVKSDEAC*LYEGKD
Trigger: ATCCTTGCCTTCATATAACAAACATGCTTCGTCAGA...TTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp TGTGTGGCTGCTACAGAAACAGTCCAGGAGTTACTGTCATGTGAAGAAAGCAAGCACCAAAGGCTGGTGTaGATAAACTACATATTGGTC +
Preference number: 5 (lower is better)
Translates to: CVAATETVQELLSCEESKHQRLV*INYILV
Trigger: GACCAATATGTAGTTTATCAACACCAGCCTTTGGTG...CTTGCTTTCTTCACATGACAGTAACTCCTGGACTGTTTCTGTAGCAGCCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS CCA 90 bp CAAGCACTTTCTCAGAAACTTGCTATTATCAGCCAAAGGAGTTACTaGGAACTGCTGATGTCCAGAAAACTGGCATACTCCTTTTGGTTA +
Preference number: 5 (lower is better)
Translates to: QALSQKLAIISQRSY*ELLMSRKLAYSFWL
Trigger: TAACCAAAAGGAGTATGCCAGTTTTCTGGACATCAGCAGTTCCCAGTAACTCCTTTGGCTGATAATAGCAAGTTTCTGAGAAAGTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS-3UTR CAA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGACCGCAGCTGCTTGCTaGCTTTCTCCAGAGCTTCTA +
Preference number: 5 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLTAAAC*LSPELL
Trigger: TAGAAGCTCTGGAGAAAGCAAGCAAGCAGCTGCGGT...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS CCA 90 bp TGCGAATCTGTGAAACCAAACAAGTTGTATACTTCCAAAATACATTaGTGGGACAGGCATAGGATAGGCATTCCCATTCCAAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: CESVKPNKLYTSKIH*WDRHRIGIPIPKAR
Trigger: TCTTGCTTTTGGAATGGGAATGCCTATCCTATGCCTGTCCCACCAATGTATTTTGGAAGTATACAACTTGTTTGGTTTCACAGATTCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS-3UTR CAA 90 bp ATTTTTAAGCAAACCAGGATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTCTGTGGCTTGAAAATTaGGCTTTGCCTCGTATTGGC +
Preference number: 5 (lower is better)
Translates to: IFKQTRIVIYRCIPKTLSLWLEN*ALPRIG
Trigger: GCCAATACGAGGCAAAGCCAAATTTTCAAGCCACAG...ACTCAAGGTCTTGGGTATGCACCTATAGATTACTATCCTGGTTTGCTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS CCA 90 bp GAATCTGTGAAACCAAACAAGTTGTATACTTCCAAAATACATTGGTaGGACAGGCATAGGATAGGCATTCCCATTCCAAAAGCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: ESVKPNKLYTSKIHW*DRHRIGIPIPKARN
Trigger: GTTTCTTGCTTTTGGAATGGGAATGCCTATCCTATGCCTGTCCCACCAATGTATTTTGGAAGTATACAACTTGTTTGGTTTCACAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS-3UTR CAA 90 bp ATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTAGCTTTTGCCAACAGTaGACCAATTGTGGGGAATCT +
Preference number: 5 (lower is better)
Translates to: IVIYRCIPKTLSEKSNFFSFCQQ*TNCGES
Trigger: AGATTCCCCACAATTGGTCAACTGTTGGCAAAAGCT...AAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR CAA 90 bp ATTTATTATAAGGAATCAGCTAACACCATTACAGTAGCCAGCAAGTCAGAGACAAGCTTTTGCCAACAGTaGACCAATTGTGGGGAATCT +
Preference number: 5 (lower is better)
Translates to: IYYKESANTITVASKSETSFCQQ*TNCGES
Trigger: AGATTCCCCACAATTGGTCAACTGTTGGCAAAAGCT...TGTCTCTGACTTGCTGGCTACTGTAATGGTGTTAGCTGATTCCTTATAATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649872.1
CDS-3UTR CAA 90 bp GTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTATCGATTCCAACAAGCTTTaGCCAACAGTTGACCAATTG +
Preference number: 5 (lower is better)
Translates to: VIYRCIPKTLSEKSNFFIDSNKL*PTVDQL
Trigger: CAATTGGTCAACTGTTGGCAAAAGCTTGTTGGAATC...GATAAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR CAA 90 bp TATTATAAGGAATCAGCTAACACCATTACAGTAGCCAGCAAGTCAGAGACACAAGATTCCAACAAGCTTTaGCCAACAGTTGACCAATTG +
Preference number: 5 (lower is better)
Translates to: YYKESANTITVASKSETQDSNKL*PTVDQL
Trigger: CAATTGGTCAACTGTTGGCAAAAGCTTGTTGGAATC...TTGTGTCTCTGACTTGCTGGCTACTGTAATGGTGTTAGCTGATTCCTTATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649872.1
CDS-3UTR CAA 90 bp ATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTTGCATACCCAAGACCTaGAGTGAAAAGAGCAACTTC +
Preference number: 5 (lower is better)
Translates to: IVIYRCIPKTLSEKSNFFCIPKT*SEKSNF
Trigger: GAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCA...AAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474949.1
ENST00000649334.1
CDS-3UTR CAA 90 bp ATAGTAATCTATAGGTGCATACCCAAGACCTTGAGTGAAAAGAGCAACTTCTTTCTTGAAAATTTGGCTTaGCCTCGTATTGGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: IVIYRCIPKTLSEKSNFFLENLA*PRIGFL
Trigger: CAAAAAGCCAATACGAGGCAAAGCCAAATTTTCAAG...AAAGAAGTTGCTCTTTTCACTCAAGGTCTTGGGTATGCACCTATAGATTACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474949.1
CDS-3UTR CAA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGGATTCCAACAAGCTTTaGCCAACAGTTGACCAATTG +
Preference number: 5 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLDSNKL*PTVDQL
Trigger: CAATTGGTCAACTGTTGGCAAAAGCTTGTTGGAATC...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS-3UTR CAA 90 bp AAACAGAATAGACACAAAAGAATGTACAACCAATACAATTCCAGAATGTCCCTGCTTGAAAATTTGGCTTaGCCTCGTATTGGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: KQNRHKRMYNQYNSRMSLLENLA*PRIGFL
Trigger: CAAAAAGCCAATACGAGGCAAAGCCAAATTTTCAAG...CAGGGACATTCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289081.8
CDS CAA 90 bp ACAGGGCAAGACCCGGGTGGTCCTCGCGGGAGCTGCTTCAGCAGTTaGGGCAGTGGCGGAAAGGAAGCCACCGCCCGGGATCTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: TGQDPGGPRGSCFSS*GSGGKEATARDLWL
Trigger: AAGCCACAGATCCCGGGCGGTGGCTTCCTTTCCGCCACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACCACCCGGGTCTTGCCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647778.1
CDS CCA 72 bp TGGTCCTCGCGGGAGCTGCTTCAGCAGTTTGGGCAGTaGCGGAAAGGAAGCCACCGCCCGGGATCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: WSSRELLQQFGQ*RKGSHRPGSVA
Trigger: AGCCACAGATCCCGGGCGGTGGCTTCCTTTCCGCCACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289081.8
ENST00000474949.1
ENST00000490972.7
ENST00000647778.1
ENST00000649611.1
CDS CCA 72 bp GCCACTGCACTCCTGGTTGACAGGGCAAGACCCGGGTaGTCCTCGCGGGAGCTGCTTCAGCAGTTTGGGCAG +
Preference number: 6 (lower is better)
Translates to: ATALLVDRARPG*SSRELLQQFGQ
Trigger: CTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACCACCCGGGTCTTGCCCTGTCAACCAGGAGTGCAGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647778.1
CDS GCA 72 bp AACAAAAAGCTGTCTGCTGGCATCTGCTCGCCTGCCTaGCATGTGCAGCGGCCCCTTTGTGCCCGCGCACCC +
Preference number: 6 (lower is better)
Translates to: NKKLSAGICSPA*HVQRPLCARAP
Trigger: GGGTGCGCGGGCACAAAGGGGCCGCTGCACATGGCAGGCAGGCGAGCAGATGCCAGCAGACAGCTTTTTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS GCA 72 bp TTGACAGGGCAAGACCCGGGTGGTCCTCGCGGGAGCTaGTTCAGCAGTTTGGGCAGTGGCGGAAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: LTGQDPGGPRGS*FSSLGSGGKEA
Trigger: GGCTTCCTTTCCGCCACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACCACCCGGGTCTTGCCCTGTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647778.1
CDS CCA 72 bp AATGGGCTGGCAGCGTCTCGTCTCTGGCCACCTCGGTaGGGACAGGAGAACGCCTCTGACCACAAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: NGLAASRLWPPR*GQENASDHKAG
Trigger: TCCAGCCTTGTGGTCAGAGGCGTTCTCCTGTCCCCACCGAGGTGGCCAGAGACGAGACGCTGCCAGCCCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS CAA 72 bp CGCCGGGCACCCACACGGCCTGCGTGCCTTCTAGACTaGAGTTCGCAGCTCTTTAAGGAGCTCTCGGGCCAG +
Preference number: 6 (lower is better)
Translates to: RRAPTRPACLLD*SSQLFKELSGQ
Trigger: CTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS CCA 72 bp GTTTTGCAGGAGAATGGGCTGGCAGCGTCTCGTCTCTaGCCACCTCGGTGGGGACAGGAGAACGCCTCTGAC +
Preference number: 6 (lower is better)
Translates to: VLQENGLAASRL*PPRWGQENASD
Trigger: GTCAGAGGCGTTCTCCTGTCCCCACCGAGGTGGCCAGAGACGAGACGCTGCCAGCCCATTCTCCTGCAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS CAA 90 bp GCACACATTAAATCGGGTGGTCCTCGCGGGAGCTGCTTCAGCAGTTaGGGCAGTGGCGGAAAGGAAGCCACCGCCCGGGATCTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: AHIKSGGPRGSCFSS*GSGGKEATARDLWL
Trigger: AAGCCACAGATCCCGGGCGGTGGCTTCCTTTCCGCCACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACCACCCGATTTAATGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289081.8
ENST00000474949.1
ENST00000490972.7
CDS TCA 72 bp CCATGTTCTTCACCTCAAGGACATCCACAGAGGCAGTaGCGCCAGGCCCAGCACACGATGCGGGGATACGCC +
Preference number: 6 (lower is better)
Translates to: PCSSPQGHPQRQ*RQAQHTMRGYA
Trigger: GGCGTATCCCCGCATCGTGTGCTGGGCCTGGCGTCACTGCCTCTGTGGATGTCCTTGAGGTGAAGAACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477942.5
CDS GCA 72 bp CCTGATCCCTCACGCCGGGCACCCACACGGCCTGCGTaGCTTCTAGACTTGAGTTCGCAGCTCTTTAAGGAG +
Preference number: 6 (lower is better)
Translates to: PDPSRRAPTRPA*LLDLSSQLFKE
Trigger: CTCCTTAAAGAGCTGCGAACTCAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289081.8
ENST00000375305.6
CDS GCA 72 bp TCGGCACACATTAAATCGGGTGGTCCTCGCGGGAGCTaGTTCAGCAGTTTGGGCAGTGGCGGAAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: SAHIKSGGPRGS*FSSLGSGGKEA
Trigger: GGCTTCCTTTCCGCCACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACCACCCGATTTAATGTGTGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289081.8
ENST00000474949.1
ENST00000490972.7
CDS CCA 72 bp GCCACTAGGGTAAAGGTCCCACCCCAGCAGCATTCCTaGCCAGATGTTGCACCCCTAGCTTCTCTACCAGGC +
Preference number: 6 (lower is better)
Translates to: ATRVKVPPQQHS*PDVAPLASLPG
Trigger: GCCTGGTAGAGAAGCTAGGGGTGCAACATCTGGCCAGGAATGCTGCTGGGGTGGGACCTTTACCCTAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS CAA 90 bp AATTTATTACTACCGGGTGGTCCTCGCGGGAGCTGCTTCAGCAGTTaGGGCAGTGGCGGAAAGGAAGCCACCGCCCGGGATCTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: NLLLPGGPRGSCFSS*GSGGKEATARDLWL
Trigger: AAGCCACAGATCCCGGGCGGTGGCTTCCTTTCCGCCACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACCACCCGGTAGTAATAAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649611.1
CDS CAA 90 bp GACAGGCCTTCTCACAGGCAGGACACATCCTGGGCGGGGACACGCTaGGTCTTTGCACCCATGTTCTTCACCTCAAGGACATCCACAGAG +
Preference number: 6 (lower is better)
Translates to: DRPSHRQDTSWAGTR*VFAPMFFTSRTSTE
Trigger: CTCTGTGGATGTCCTTGAGGTGAAGAACATGGGTGCAAAGACCAAGCGTGTCCCCGCCCAGGATGTGTCCTGCCTGTGAGAAGGCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477942.5
CDS CAA 72 bp GGCAGGACACATCCTGGGCGGGGACACGCTTGGTCTTaGCACCCATGTTCTTCACCTCAAGGACATCCACAG +
Preference number: 6 (lower is better)
Translates to: GRTHPGRGHAWS*HPCSSPQGHPQ
Trigger: CTGTGGATGTCCTTGAGGTGAAGAACATGGGTGCAAAGACCAAGCGTGTCCCCGCCCAGGATGTGTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477942.5
CDS GCA 72 bp CACATGCATACATGCGCATGCCTATTCATCCTGACCTaGTCCAAGCCATCCGTGCAGCCATGCGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: HMHTCACLFILT*SKPSVQPCASS
Trigger: GGAGGAAGCGCATGGCTGCACGGATGGCTTGGAGCAGGTCAGGATGAATAGGCATGCGCATGTATGCATGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS GCA 72 bp GCAGGACACATCCTGGGCGGGGACACGCTTGGTCTTTaGACCCATGTTCTTCACCTCAAGGACATCCACAGA +
Preference number: 6 (lower is better)
Translates to: AGHILGGDTLGL*THVLHLKDIHR
Trigger: TCTGTGGATGTCCTTGAGGTGAAGAACATGGGTGCAAAGACCAAGCGTGTCCCCGCCCAGGATGTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477942.5
CDS GCA 72 bp GGCTGGCAAGATGGCCGAATAGGAACAGCTCTGGTCTaGAGCTCCCAACAGGATCAATGCAGAAGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: GWQDGRIGTALV*SSQQDQCRRQV
Trigger: CACCTGCCTTCTGCATTGATCCTGTTGGGAGCTGCAGACCAGAGCTGTTCCTATTCGGCCATCTTGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649519.1
CDS GCA 72 bp GGTAATTTATTACTACCGGGTGGTCCTCGCGGGAGCTaGTTCAGCAGTTTGGGCAGTGGCGGAAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: GNLLLPGGPRGS*FSSLGSGGKEA
Trigger: GGCTTCCTTTCCGCCACTGCCCAAACTGCTGAAGCAGCTCCCGCGAGGACCACCCGGTAGTAATAAATTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649611.1
CDS CCA 72 bp AGTTCTACTGAAGTGTGCCTGTGTGACCTCCTCAAATaGCTAGATGTGCCTCGAGGTCAGGCCCGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: SSTEVCLCDLLK*LDVPRGQARAC
Trigger: GCAGGCACGGGCCTGACCTCGAGGCACATCTAGCCATTTGAGGAGGTCACACAGGCACACTTCAGTAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS CCA 72 bp CTCACAGGCAGGACACATCCTGGGCGGGGACACGCTTaGTCTTTGCACCCATGTTCTTCACCTCAAGGACAT +
Preference number: 6 (lower is better)
Translates to: LTGRTHPGRGHA*SLHPCSSPQGH
Trigger: ATGTCCTTGAGGTGAAGAACATGGGTGCAAAGACCAAGCGTGTCCCCGCCCAGGATGTGTCCTGCCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477942.5
CDS CAA 72 bp TCTCACAGGCAGGACACATCCTGGGCGGGGACACGCTaGGTCTTTGCACCCATGTTCTTCACCTCAAGGACA +
Preference number: 6 (lower is better)
Translates to: SHRQDTSWAGTR*VFAPMFFTSRT
Trigger: TGTCCTTGAGGTGAAGAACATGGGTGCAAAGACCAAGCGTGTCCCCGCCCAGGATGTGTCCTGCCTGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477942.5
CDS CCA 72 bp GGCAGTGGCGGAAAGGAAGCCACCGCCCGGGATCTGTaGCTTGAAAATTTGGCTTTGCCTCGTATTGGCTTT +
Preference number: 6 (lower is better)
Translates to: GSGGKEATARDL*LENLALPRIGF
Trigger: AAAGCCAATACGAGGCAAAGCCAAATTTTCAAGCCACAGATCCCGGGCGGTGGCTTCCTTTCCGCCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289081.8
ENST00000474949.1
ENST00000490972.7
ENST00000647778.1
ENST00000649611.1
CDS TCA 72 bp ATTGGCACATGCATACATGCGCATGCCTATTCATCCTaGCCTGCTCCAAGCCATCCGTGCAGCCATGCGCTT +
Preference number: 6 (lower is better)
Translates to: IGTCIHAHAYSS*PAPSHPCSHAL
Trigger: AAGCGCATGGCTGCACGGATGGCTTGGAGCAGGTCAGGATGAATAGGCATGCGCATGTATGCATGTGCCAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS TCA 72 bp CCTTGGAGGACGCGACCCTGGGGCAGATATGGCAGCTaGGCAATAACAGATCAAATGACCTTGGGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: PWRTRPWGRYGS*AITDQMTLGKK
Trigger: CTTCTTCCCCAAGGTCATTTGATCTGTTATTGCTCAGCTGCCATATCTGCCCCAGGGTCGCGTCCTCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490972.7
CDS GCA 72 bp GTGGAGCCTGCCTGTACTGCCAGTTCTACTGAAGTGTaGCTGTGTGACCTCCTCAAATGGCTAGATGTGCCT +
Preference number: 6 (lower is better)
Translates to: VEPACTASSTEV*LCDLLKWLDVP
Trigger: AGGCACATCTAGCCATTTGAGGAGGTCACACAGGCACACTTCAGTAGAACTGGCAGTACAGGCAGGCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS GCA 72 bp TTCTTTCGTCTTGCTCACCAAGCAGTCAGGGCACCATaGCAGGAACTGACCATAGTCTGTGCTCTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FFRLAHQAVRAP*QELTIVCALCC
Trigger: GCAGCAGAGAGCACAGACTATGGTCAGTTCCTGGCATGGTGCCCTGACTGCTTGGTGAGCAAGACGAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480712.5
CDS TCA 72 bp TGGCGGAAAGGAAGCCACCGCCCGGGATCTGTGGCTTaGAAATTTGGCTTTGCCTCGTATTGGCTTTTTGAG +
Preference number: 6 (lower is better)
Translates to: WRKGSHRPGSVA*KFGFASYWLFE
Trigger: CTCAAAAAGCCAATACGAGGCAAAGCCAAATTTTCAAGCCACAGATCCCGGGCGGTGGCTTCCTTTCCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289081.8
ENST00000474949.1
ENST00000490972.7
ENST00000647778.1
ENST00000649611.1
CDS TCA 72 bp GCTGGGAAGGTGCCGAAGCCAGAGGCAGACTACAGCTaGCATGGGGAGAGAAATCTTCTTCCTTTCAGAAAG +
Preference number: 6 (lower is better)
Translates to: AGKVPKPEADYS*HGERNLLPFRK
Trigger: CTTTCTGAAAGGAAGAAGATTTCTCTCCCCATGTCAGCTGTAGTCTGCCTCTGGCTTCGGCACCTTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477942.5
CDS GCA 72 bp TTGCAAGTACTACCTTCCACAAAACAAAAAGCTGTCTaGTGGCATCTGCTCGCCTGCCTGCCATGTGCAGCG +
Preference number: 6 (lower is better)
Translates to: LQVLPSTKQKAV*WHLLACLPCAA
Trigger: CGCTGCACATGGCAGGCAGGCGAGCAGATGCCAGCAGACAGCTTTTTGTTTTGTGGAAGGTAGTACTTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS CAA 72 bp GAACTCCTGGAACTGAGCCACGTGAAGACAGGTGTCTaGCTGGGTTTCCAAAGTGGAAGCCTGATCCCATAC +
Preference number: 6 (lower is better)
Translates to: ELLELSHVKTGV*LGFQSGSLIPY
Trigger: GTATGGGATCAGGCTTCCACTTTGGAAACCCAGCAAGACACCTGTCTTCACGTGGCTCAGTTCCAGGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000289081.8
ENST00000375305.6
ENST00000433829.1
ENST00000474949.1
ENST00000490972.7
ENST00000636777.1
ENST00000647778.1
ENST00000647882.1
ENST00000648415.1
ENST00000649334.1
ENST00000649519.1
ENST00000649611.1
ENST00000649872.1
ENST00000650176.1
CDS TCA 72 bp GGCCCTAACACTACCAACTTGGAACTACCACTCATGTaGGTTTCCTCTGGCTCTCTCCATGGCCCAGATAAT +
Preference number: 6 (lower is better)
Translates to: GPNTTNLELPLM*VSSGSLHGPDN
Trigger: ATTATCTGGGCCATGGAGAGAGCCAGAGGAAACTCACATGAGTGGTAGTTCCAAGTTGGTAGTGTTAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648415.1
CDS GCA 72 bp TGTTGCACCCCTAGCTTCTCTACCAGGCAAAGATTGTaGCTCCACATCTTTGGTTGGAAGCTGTCTGGACTA +
Preference number: 6 (lower is better)
Translates to: CCTPSFSTRQRL*LHIFGWKLSGL
Trigger: TAGTCCAGACAGCTTCCAACCAAAGATGTGGAGGCACAATCTTTGCCTGGTAGAGAAGCTAGGGGTGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS GCA 72 bp TTTCGATACAGGTATTGGCACATGCATACATGCGCATaGCTATTCATCCTGACCTGCTCCAAGCCATCCGTG +
Preference number: 6 (lower is better)
Translates to: FRYRYWHMHTCA*LFILTCSKPSV
Trigger: CACGGATGGCTTGGAGCAGGTCAGGATGAATAGGCATGCGCATGTATGCATGTGCCAATACCTGTATCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS CCA 72 bp TTTCCAGCCCGATTTGAGGCCCTAACACTACCAACTTaGAACTACCACTCATGTGAGTTTCCTCTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: FPARFEALTLPT*NYHSCEFPLAL
Trigger: GAGAGCCAGAGGAAACTCACATGAGTGGTAGTTCCAAGTTGGTAGTGTTAGGGCCTCAAATCGGGCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648415.1
CDS CAA 72 bp AGATGTTGCACCCCTAGCTTCTCTACCAGGCAAAGATaGTGCCTCCACATCTTTGGTTGGAAGCTGTCTGGA +
Preference number: 6 (lower is better)
Translates to: RCCTPSFSTRQR*CLHIFGWKLSG
Trigger: TCCAGACAGCTTCCAACCAAAGATGTGGAGGCACAATCTTTGCCTGGTAGAGAAGCTAGGGGTGCAACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS CAA 72 bp TTCTCCTTGAATATTTCGGTGATGGGTTCTGATTATTaGAGTCTGCAGAAGCTGGCCTCCGGTAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: FSLNISVMGSDY*SLQKLASGSPG
Trigger: CCCAGGGCTACCGGAGGCCAGCTTCTGCAGACTCAAATAATCAGAACCCATCACCGAAATATTCAAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS CAA 90 bp AACCAGGGCAATAGTCCTTCAAATTGGAGGCAGAGGACCTCCAAATaGCCTCGGGGCCCTTCATCCCTTTTACTAGATGATAGCACAAAG +
Preference number: 6 (lower is better)
Translates to: NQGNSPSNWRQRTSK*PRGPSSLLLDDSTK
Trigger: CTTTGTGCTATCATCTAGTAAAAGGGATGAAGGGCCCCGAGGCAATTTGGAGGTCCTCTGCCTCCAATTTGAAGGACTATTGCCCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS CAA 90 bp TTATCTAATTTCTCCTTGAATATTTCGGTGATGGGTTCTGATTATTaGAGTCTGCAGAAGCTGGCCTCCGGTAGCCCTGGGAGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: LSNFSLNISVMGSDY*SLQKLASGSPGSWG
Trigger: CCCCCAGCTCCCAGGGCTACCGGAGGCCAGCTTCTGCAGACTCAAATAATCAGAACCCATCACCGAAATATTCAAGGAGAAATTAGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS TCA 72 bp GCCTCCACATCTTTGGTTGGAAGCTGTCTGGACTATTaGAACCAGGGCAATAGTCCTTCAAATTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: ASTSLVGSCLDY*NQGNSPSNWRQ
Trigger: CTGCCTCCAATTTGAAGGACTATTGCCCTGGTTTCAATAGTCCAGACAGCTTCCAACCAAAGATGTGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS TCA 72 bp TTGCTCACCCATGAGTCTGGTCTTCAACTGCTTCTCTaGGCAGTTCAGAAATATGCTTCAGTGTCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: LLTHESGLQLLL*AVQKYASVSGA
Trigger: GGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS TCA 72 bp AATGCCTTCCTCTGTCAGCCCTGCTCAAAGGGCAGATaGGGATCTAGGGAAACCATGTGTGAAGTAGATTTG +
Preference number: 6 (lower is better)
Translates to: NAFLCQPCSKGR*GSRETMCEVDL
Trigger: CAAATCTACTTCACACATGGTTTCCCTAGATCCTCATCTGCCCTTTGAGCAGGGCTGACAGAGGAAGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS TCA 72 bp TTCCTCTGGAGCACAGCGCAGCAGTCTCGTGCTATCTaGGTCTTAGAGATCTCTCTGATACTTCTGTACAGT +
Preference number: 6 (lower is better)
Translates to: FLWSTAQQSRAI*VLEISLILLYS
Trigger: ACTGTACAGAAGTATCAGAGAGATCTCTAAGACTCAGATAGCACGAGACTGCTGCGCTGTGCTCCAGAGGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649701.1
CDS GCA 72 bp ATCAGGTTTCCTCTGGAGCACAGCGCAGCAGTCTCGTaGTATCTGAGTCTTAGAGATCTCTCTGATACTTCT +
Preference number: 6 (lower is better)
Translates to: IRFPLEHSAAVS*YLSLRDLSDTS
Trigger: AGAAGTATCAGAGAGATCTCTAAGACTCAGATAGCACGAGACTGCTGCGCTGTGCTCCAGAGGAAACCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649701.1
CDS CCA 72 bp CTTCTCTACCAGGCAAAGATTGTGCCTCCACATCTTTaGTTGGAAGCTGTCTGGACTATTGAAACCAGGGCA +
Preference number: 6 (lower is better)
Translates to: LLYQAKIVPPHL*LEAVWTIETRA
Trigger: TGCCCTGGTTTCAATAGTCCAGACAGCTTCCAACCAAAGATGTGGAGGCACAATCTTTGCCTGGTAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS CCA 72 bp AAGCAAAATGGCCTCGTTTACAGCCTCAAAGAACTCTaGCTGGAGGATTTCCTGAGGTTCACGTCCATGACA +
Preference number: 6 (lower is better)
Translates to: KQNGLVYSLKEL*LEDFLRFTSMT
Trigger: TGTCATGGACGTGAACCTCAGGAAATCCTCCAGCCAGAGTTCTTTGAGGCTGTAAACGAGGCCATTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493098.1
CDS CAA 90 bp TACACTCGATTTCACACAAACCCAAATGGGCGGAATGGAAATTTCTaGACTTTCTTTCGTCTTGCTCACCAAGCAGTCAGGGCACCATGC +
Preference number: 6 (lower is better)
Translates to: YTRFHTNPNGRNGNF*TFFRLAHQAVRAPC
Trigger: GCATGGTGCCCTGACTGCTTGGTGAGCAAGACGAAAGAAAGTCAAGAAATTTCCATTCCGCCCATTTGGGTTTGTGTGAAATCGAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480712.5
CDS CAA 72 bp AATAGTCCTTCAAATTGGAGGCAGAGGACCTCCAAATaGCCTCGGGGCCCTTCATCCCTTTTACTAGATGAT +
Preference number: 6 (lower is better)
Translates to: NSPSNWRQRTSK*PRGPSSLLLDD
Trigger: ATCATCTAGTAAAAGGGATGAAGGGCCCCGAGGCAATTTGGAGGTCCTCTGCCTCCAATTTGAAGGACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS CAA 72 bp CTCTACCAGGCAAAGATTGTGCCTCCACATCTTTGGTaGGAAGCTGTCTGGACTATTGAAACCAGGGCAATA +
Preference number: 6 (lower is better)
Translates to: LYQAKIVPPHLW*EAVWTIETRAI
Trigger: TATTGCCCTGGTTTCAATAGTCCAGACAGCTTCCAACCAAAGATGTGGAGGCACAATCTTTGCCTGGTAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS GCA 72 bp GTCAGTGTTTGCTCACCCATGAGTCTGGTCTTCAACTaGTTCTCTGAGCAGTTCAGAAATATGCTTCAGTGT +
Preference number: 6 (lower is better)
Translates to: VSVCSPMSLVFN*FSEQFRNMLQC
Trigger: ACACTGAAGCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTGAGCAAACACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS CCA 72 bp ATCTATATACTTACAGGAGTCTTCCCCCAACAACACTaGGTGTCTTCCCTGCAAAGCAAAATGGCCTCGTTT +
Preference number: 6 (lower is better)
Translates to: IYILTGVFPQQH*VSSLQSKMASF
Trigger: AAACGAGGCCATTTTGCTTTGCAGGGAAGACACCCAGTGTTGTTGGGGGAAGACTCCTGTAAGTATATAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493098.1
CDS CCA 72 bp TCTCAGAAACTTGCTATTATCAGCCAAAGGAGTTACTaGGAACTGCTGATGTCCAGAAAACTGGCATACTCC +
Preference number: 6 (lower is better)
Translates to: SQKLAIISQRSY*ELLMSRKLAYS
Trigger: GGAGTATGCCAGTTTTCTGGACATCAGCAGTTCCCAGTAACTCCTTTGGCTGATAATAGCAAGTTTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS CAA 72 bp CGGCACACATTAAATCTGAAAAATCTCTCACGGGCTTaGAAGATATGGCCTGGCGTCCACAAAAAGAATGGA +
Preference number: 6 (lower is better)
Translates to: RHTLNLKNLSRA*KIWPGVHKKNG
Trigger: TCCATTCTTTTTGTGGACGCCAGGCCATATCTTCAAAGCCCGTGAGAGATTTTTCAGATTTAATGTGTGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433829.1
ENST00000650176.1
CDS CAA 72 bp GGAACTGCTGATGTCCAGAAAACTGGCATACTCCTTTaGGTTAGAAGAACGAACCACTGCTGTACTGAAAAC +
Preference number: 6 (lower is better)
Translates to: GTADVQKTGILL*VRRTNHCCTEN
Trigger: GTTTTCAGTACAGCAGTGGTTCGTTCTTCTAACCAAAAGGAGTATGCCAGTTTTCTGGACATCAGCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS TCA 72 bp TTTAAAAATCATTTGGTGCTCATTTCCAGCCCGATTTaGGGCCCTAACACTACCAACTTGGAACTACCACTC +
Preference number: 6 (lower is better)
Translates to: FKNHLVLISSPI*GPNTTNLELPL
Trigger: GAGTGGTAGTTCCAAGTTGGTAGTGTTAGGGCCTCAAATCGGGCTGGAAATGAGCACCAAATGATTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648415.1
CDS CCA 72 bp TTAAATCTGAAAAATCTCTCACGGGCTTTGAAGATATaGCCTGGCGTCCACAAAAAGAATGGAGGGAAGACA +
Preference number: 6 (lower is better)
Translates to: LNLKNLSRALKI*PGVHKKNGGKT
Trigger: TGTCTTCCCTCCATTCTTTTTGTGGACGCCAGGCCATATCTTCAAAGCCCGTGAGAGATTTTTCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650176.1
CDS TCA 72 bp TTAAGTTCATGGTACACAGCCACACTAATCTCTTTATaGAATGGTTGGTCCACCACACCCTTAGTGTTCTCT +
Preference number: 6 (lower is better)
Translates to: LSSWYTATLISL*NGWSTTPLVFS
Trigger: AGAGAACACTAAGGGTGTGGTGGACCAACCATTTCATAAAGAGATTAGTGTGGCTGTGTACCATGAACTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS TCA 72 bp ATATCTTCTAAATTAGGTACAGTGAGACTTGAGTTATaGTTCATCCTGGGGCAAAATTCCTCTCCAGCTGCG +
Preference number: 6 (lower is better)
Translates to: ISSKLGTVRLEL*FILGQNSSPAA
Trigger: CGCAGCTGGAGAGGAATTTTGCCCCAGGATGAATCATAACTCAAGTCTCACTGTACCTAATTTAGAAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS GCA 72 bp AGAGATCTCTCTGATACTTCTGTACAGTCCTGTCACTaGACCAAGATACTGCACAGCGATGAATCTTTTATA +
Preference number: 6 (lower is better)
Translates to: RDLSDTSVQSCH*TKILHSDESFI
Trigger: TATAAAAGATTCATCGCTGTGCAGTATCTTGGTGCAGTGACAGGACTGTACAGAAGTATCAGAGAGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649701.1
CDS CCA 72 bp GTGAAACCAAACAAGTTGTATACTTCCAAAATACATTaGTGGGACAGGCATAGGATAGGCATTCCCATTCCA +
Preference number: 6 (lower is better)
Translates to: VKPNKLYTSKIH*WDRHRIGIPIP
Trigger: TGGAATGGGAATGCCTATCCTATGCCTGTCCCACCAATGTATTTTGGAAGTATACAACTTGTTTGGTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS CAA 90 bp ATTAAGTTCATGGTACACAGCCACACTAATCTCTTTATGAAATGGTaGGTCCACCACACCCTTAGTGTTCTCTTCAGTACACACTTTCTC +
Preference number: 6 (lower is better)
Translates to: IKFMVHSHTNLFMKW*VHHTLSVLFSTHFL
Trigger: GAGAAAGTGTGTACTGAAGAGAACACTAAGGGTGTGGTGGACCAACCATTTCATAAAGAGATTAGTGTGGCTGTGTACCATGAACTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS CAA 90 bp AATCTAAAACCAGACGTTAATGTAGAAAACATTTCGATACAGGTATaGGCACATGCATACATGCGCATGCCTATTCATCCTGACCTGCTC +
Preference number: 6 (lower is better)
Translates to: NLKPDVNVENISIQV*AHAYMRMPIHPDLL
Trigger: GAGCAGGTCAGGATGAATAGGCATGCGCATGTATGCATGTGCCAATACCTGTATCGAAATGTTTTCTACATTAACGTCTGGTTTTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464653.1
CDS CAA 90 bp TTTACTACAATCAACTGGGAGGAACCAAGTCACTTCTTCGACATTTaGCTTAGAAATCTCCTCAGTAAAATATCCAGTTTCATCCCTTGC +
Preference number: 6 (lower is better)
Translates to: FTTINWEEPSHFFDI*LRNLLSKISSFIPC
Trigger: GCAAGGGATGAAACTGGATATTTTACTGAGGAGATTTCTAAGCAAAATGTCGAAGAAGTGACTTGGTTCCTCCCAGTTGATTGTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433644.2
CDS GCA 72 bp TTCTTCTTGCCTTGTGACTTGGCTCCAAGTTATTTCTaGCTCTTTCTCTCCTTGATTCTACAGGTAATTTAT +
Preference number: 6 (lower is better)
Translates to: FFLPCDLAPSYF*LFLSLILQVIY
Trigger: ATAAATTACCTGTAGAATCAAGGAGAGAAAGAGGCAGAAATAACTTGGAGCCAAGTCACAAGGCAAGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648415.1
ENST00000649611.1
CDS CCA 72 bp AAACCAAACAAGTTGTATACTTCCAAAATACATTGGTaGGACAGGCATAGGATAGGCATTCCCATTCCAAAA +
Preference number: 6 (lower is better)
Translates to: KPNKLYTSKIHW*DRHRIGIPIPK
Trigger: TTTTGGAATGGGAATGCCTATCCTATGCCTGTCCCACCAATGTATTTTGGAAGTATACAACTTGTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433644.2