RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM99A (Homo sapiens)

Ensembl gene IDs: ENSG00000205866

Ensembl transcript IDs: ENST00000382167.2, ENST00000538190.2, ENST00000626916.1, ENST00000629621.1, ENST00000629626.1, ENST00000631114.1, ENST00000660644.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 72 bp GTGAGGGGTGCAGTTAGGCCGGCCGGGCATGGTCCCTaGAATCAAGTCTCTAGAGCGGGGGTGACGGCCACG +
Preference number: 6 (lower is better)
Translates to: VRGAVRPAGHGP*NQVSRAGVTAT
Trigger: CGTGGCCGTCACCCCCGCTCTAGAGACTTGATTGCAGGGACCATGCCCGGCCGGCCTAACTGCACCCCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000382167.2
ENST00000538190.2
ENST00000626916.1
ENST00000629621.1
ENST00000629626.1
ENST00000631114.1
ENST00000660644.1
CDS TCA 72 bp GGGCCTGAAAAGCGGTTCCATAGTGTCTGCAGCTTCTaGGCACTGAGGGATGAGCCCACACACGCATCACAA +
Preference number: 6 (lower is better)
Translates to: GPEKRFHSVCSF*ALRDEPTHASQ
Trigger: TTGTGATGCGTGTGTGGGCTCATCCCTCAGTGCTCAGAAGCTGCAGACACTATGGAACCGCTTTTCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382167.2
ENST00000538190.2
ENST00000626916.1
ENST00000629621.1
ENST00000629626.1
ENST00000631114.1
ENST00000660644.1
CDS TCA 72 bp CCTGTGACTTTTATTCAGGCACTGAACAGTGTAAACTaGTTCACACCTTCTGGGCTGCACCACCACAGGGGC +
Preference number: 6 (lower is better)
Translates to: PVTFIQALNSVN*FTPSGLHHHRG
Trigger: GCCCCTGTGGTGGTGCAGCCCAGAAGGTGTGAATCAGTTTACACTGTTCAGTGCCTGAATAAAAGTCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000382167.2
ENST00000538190.2
ENST00000626916.1
ENST00000629621.1
ENST00000629626.1
ENST00000631114.1
ENST00000660644.1