Pregenerated sensors for FAM99A (Homo sapiens)
Ensembl gene IDs: ENSG00000205866Ensembl transcript IDs: ENST00000382167.2, ENST00000538190.2, ENST00000626916.1, ENST00000629621.1, ENST00000629626.1, ENST00000631114.1, ENST00000660644.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 72 bp | GTGAGGGGTGCAGTTAGGCCGGCCGGGCATGGTCCCTaGAATCAAGTCTCTAGAGCGGGGGTGACGGCCACG | + |
Preference number: 6 (lower is better) Translates to: VRGAVRPAGHGP*NQVSRAGVTAT Trigger: CGTGGCCGTCACCCCCGCTCTAGAGACTTGATTGCAGGGACCATGCCCGGCCGGCCTAACTGCACCCCTCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000382167.2 ENST00000538190.2 ENST00000626916.1 ENST00000629621.1 ENST00000629626.1 ENST00000631114.1 ENST00000660644.1 |
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CDS TCA 72 bp | GGGCCTGAAAAGCGGTTCCATAGTGTCTGCAGCTTCTaGGCACTGAGGGATGAGCCCACACACGCATCACAA | + |
Preference number: 6 (lower is better) Translates to: GPEKRFHSVCSF*ALRDEPTHASQ Trigger: TTGTGATGCGTGTGTGGGCTCATCCCTCAGTGCTCAGAAGCTGCAGACACTATGGAACCGCTTTTCAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000382167.2 ENST00000538190.2 ENST00000626916.1 ENST00000629621.1 ENST00000629626.1 ENST00000631114.1 ENST00000660644.1 |
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CDS TCA 72 bp | CCTGTGACTTTTATTCAGGCACTGAACAGTGTAAACTaGTTCACACCTTCTGGGCTGCACCACCACAGGGGC | + |
Preference number: 6 (lower is better) Translates to: PVTFIQALNSVN*FTPSGLHHHRG Trigger: GCCCCTGTGGTGGTGCAGCCCAGAAGGTGTGAATCAGTTTACACTGTTCAGTGCCTGAATAAAAGTCACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000382167.2 ENST00000538190.2 ENST00000626916.1 ENST00000629621.1 ENST00000629626.1 ENST00000631114.1 ENST00000660644.1 |