Pregenerated sensors for FAM98B (Homo sapiens)
Ensembl gene IDs: ENSG00000171262Ensembl transcript IDs: ENST00000305752.4, ENST00000397609.6, ENST00000491535.5, ENST00000559431.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAAAGAAGTTCAGTAGCTTGCTCAGGGTCATTTCTGTAAGTAAATaGCAGAGCCAGGATGGGAACCCAGATTGGTCTGACTCTAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: SKKFSSLLRVISVSK*QSQDGNPDWSDSKA Trigger: TGCTTTAGAGTCAGACCAATCTGGGTTCCCATCCTGGCTCTGTCATTTACTTACAGAAATGACCCTGAGCAAGCTACTGAACTTCTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR CCA 90 bp | TCTTGGTTATTATTCTCACTGGTCTCTCTACCAAACATGGTATGTTaGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTC | + |
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Preference number: 1 (lower is better) Translates to: SWLLFSLVSLPNMVC*WAYGDARTDHKTTL Trigger: GAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATACCATGTTTGGTAGAGAGACCAGTGAGAATAATAACCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR CCA 90 bp | TGGTTATTATTCTCACTGGTCTCTCTACCAAACATGGTATGTTGGTaGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: WLLFSLVSLPNMVCW*AYGDARTDHKTTLK Trigger: TTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATACCATGTTTGGTAGAGAGACCAGTGAGAATAATAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR GCA 90 bp | AAGAGTTTAAGTATCCAACCTTCTATAAAAAGTAGCAGCTTTATATaGCATGAGCAGAGGAAAGATAGCAATAAGAAGGGTGTCATCTGC | + |
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Preference number: 1 (lower is better) Translates to: KSLSIQPSIKSSSFI*HEQRKDSNKKGVIC Trigger: GCAGATGACACCCTTCTTATTGCTATCTTTCCTCTGCTCATGGCATATAAAGCTGCTACTTTTTATAGAAGGTTGGATACTTAAACTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR CCA 90 bp | TACCACTTGTCCACTGGGAACAATTCAGCTTTCTATCAGTTGAGTTaGTTAGATCACATTAAGTTGTTATGTATAGGTATTGACCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: YHLSTGNNSAFYQLS*LDHIKLLCIGIDQK Trigger: CTTCTGGTCAATACCTATACATAACAACTTAATGTGATCTAACCAACTCAACTGATAGAAAGCTGAATTGTTCCCAGTGGACAAGTGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR GCA 90 bp | ATAGGACTATTTCTCACACCGTCATGTAAAGTTGGTATGTGTCTTTaGTCCATTAAAGTATTTCTGACCTCAATCTTAAACTTTGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: IGLFLTPSCKVGMCL*SIKVFLTSILNFAL Trigger: CAAAGCAAAGTTTAAGATTGAGGTCAGAAATACTTTAATGGAGCAAAGACACATACCAACTTTACATGACGGTGTGAGAAATAGTCCTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGGGTGTCATCTGCTCACCACAGACAAGGGGAAGCCAATAGCTTCCTGCTACATTTCTGTAAGTAAATaGCAGAGCCAGGATGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: EGCHLLTTDKGKPIASCYISVSK*QSQDGN Trigger: GTTCCCATCCTGGCTCTGTCATTTACTTACAGAAAT...GTAGCAGGAAGCTATTGGCTTCCCCTTGTCTGTGGTGAGCAGATGACACCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAATAATGAGACCAGGATTGAGCCACAGTaGAAGCACAGAGGCAAACAC | + |
|
Preference number: 2 (lower is better) Translates to: GHMEMPELIIRLPSNNETRIEPQ*KHRGKH Trigger: GTGTTTGCCTCTGTGCTTCCACTGTGGCTCAATCCT...GGTCTCATTATTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR-3UTR CCA 90 bp | GTATGTTGGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAAGATGGGAACCCAGATTaGTCTGACTCTAAAGCACAA | + |
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Preference number: 2 (lower is better) Translates to: VCWWAYGDARTDHKTTLKDGNPD*SDSKAQ Trigger: TTGTGCTTTAGAGTCAGACCAATCTGGGTTCCCATC...TTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR-3UTR TCA 90 bp | CAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTGTAAAATCGAACCACAGCAATACAGGTaGGGCAAGGGTCTATATTCC | + |
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Preference number: 2 (lower is better) Translates to: QLPTKYNWKCLSLFCKIEPQQYR*GKGLYS Trigger: GGAATATAGACCCTTGCCTCACCTGTATTGCTGTGG...TTCGATTTTACAAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR TCA 90 bp | GTATGTTGGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAATATCTCAAGTTACACTaGGTGAGAAGCGATGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: VCWWAYGDARTDHKTTLKYLKLH*VRSDAL Trigger: TAAAGCATCGCTTCTCACTCAGTGTAACTTGAGATA...TTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR-3UTR TCA 90 bp | GACTACTTTAGGCAGAAACTCCCAGTAAGATCATGTCTATATTTGCTATTAGGTCTACCCTTGATCTACTaGAGCAGAAAATTACTGCCT | + |
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Preference number: 2 (lower is better) Translates to: DYFRQKLPVRSCLYLLLGLPLIY*SRKLLP Trigger: AGGCAGTAATTTTCTGCTTCAGTAGATCAAGGGTAG...ACCTAATAGCAAATATAGACATGATCTTACTGGGAGTTTCTGCCTAAAGTAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR TCA 90 bp | GACTACTTTAGGCAGAAACTCCCAGTAAGATCATGTCTATATTTGCTATTAGGTCCTGACCTAGTGCCATaGTTCAAATTCACAACTCTT | + |
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Preference number: 2 (lower is better) Translates to: DYFRQKLPVRSCLYLLLGPDLVP*FKFTTL Trigger: AAGAGTTGTGAATTTGAATCATGGCACTAGGTCAGG...ACCTAATAGCAAATATAGACATGATCTTACTGGGAGTTTCTGCCTAAAGTAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGGAGTGCCATTCATCATACTCCATGTCGTATTGCACTCAATTTATAAAAGTCTCATTCCTCATTTaGCAAATGAGGACAAATCAC | + |
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Preference number: 2 (lower is better) Translates to: AVECHSSYSMSYCTQFIKVSFLI*QMRTNH Trigger: GTGATTTGTCCTCATTTGTCAAATGAGGAATGAGAC...TTTTATAAATTGAGTGCAATACGACATGGAGTATGATGAATGGCACTCCACTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGGAGTGCCATTCATCATACTCCATGTCGTATTGCACTCAATTTATAAAAATACCACTTGTCCACTaGGAACAATTCAGCTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: AVECHSSYSMSYCTQFIKIPLVH*EQFSFL Trigger: TAGAAAGCTGAATTGTTCCCAGTGGACAAGTGGTAT...TTTTATAAATTGAGTGCAATACGACATGGAGTATGATGAATGGCACTCCACTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR TCA 90 bp | GACTACTTTAGGCAGAAACTCCCAGTAAGATCATGTCTATATTTGCTATTAGGTGTTATGTATAGGTATTaGCCAGAAGCCTACAATGAG | + |
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Preference number: 2 (lower is better) Translates to: DYFRQKLPVRSCLYLLLGVMYRY*PEAYNE Trigger: CTCATTGTAGGCTTCTGGTCAATACCTATACATAAC...ACCTAATAGCAAATATAGACATGATCTTACTGGGAGTTTCTGCCTAAAGTAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR GCA 90 bp | GACTACTTTAGGCAGAAACTCCCAGTAAGATCATGTCTATATTTGCTATTAGGTTGCTATTCCAGATACTaGTCAGCAAACTGTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: DYFRQKLPVRSCLYLLLGCYSRY*SANCST Trigger: TGTAGAACAGTTTGCTGAGCAGTATCTGGAATAGCA...ACCTAATAGCAAATATAGACATGATCTTACTGGGAGTTTCTGCCTAAAGTAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR GCA 90 bp | TTTAAAGAGAGAACACTTTCAGAACATAGGATTGAGCCACAGTGGAAGCACAGATTTTGTAATAAAGTTTaGCATGGAGTGCTCTACCTA | + |
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Preference number: 2 (lower is better) Translates to: FKERTLSEHRIEPQWKHRFCNKV*HGVLYL Trigger: TAGGTAGAGCACTCCATGGCAAACTTTATTACAAAA...TCTGTGCTTCCACTGTGGCTCAATCCTATGTTCTGAAAGTGTTCTCTCTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR-3UTR GCA 90 bp | ATAGACAGAATACATGCTCTTTATACGGTCGAGAGGAAAGATGACTACTTTAGGGTTGGTATGTGTCTTTaGTCCATTAAAGTATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: IDRIHALYTVERKDDYFRVGMCL*SIKVFL Trigger: CAGAAATACTTTAATGGAGCAAAGACACATACCAAC...CCTAAAGTAGTCATCTTTCCTCTCGACCGTATAAAGAGCATGTATTCTGTCTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR CCA 90 bp | ATGATTCACAACAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTCCTTTCTATTACAGGTaGGGTCTTTTATATGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: MIHNNCLLNTTGSAFPYFPFYYR*GLLYVS Trigger: TGAGACATATAAAAGACCCCACCTGTAATAGAAAGG...AAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTGTTGTGAATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR CAA 90 bp | ATCAAATACCACTTGTCCACTGGGAACAATTCAGCTTTCTATCAGTaGAGTTGGTTAGATCACATTAAGTTGTTATGTATAGGTATTGAC | + |
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Preference number: 2 (lower is better) Translates to: IKYHLSTGNNSAFYQ*SWLDHIKLLCIGID Trigger: GTCAATACCTATACATAACAACTTAATGTGATCTAACCAACTCAACTGATAGAAAGCTGAATTGTTCCCAGTGGACAAGTGGTATTTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR CCA 90 bp | CAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTGTAAAATCGAAAGGGTACACAGAATATaGAAAAAGTCATCACTTCAT | + |
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Preference number: 2 (lower is better) Translates to: QLPTKYNWKCLSLFCKIERVHRI*KKSSLH Trigger: ATGAAGTGATGACTTTTTCCATATTCTGTGTACCCT...TTCGATTTTACAAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR CCA 72 bp | TTCTCACTGGTCTCTCTACCAAACATGGTATGTTGGTaGGCATATGGAGATGCCAGAACTGATCATAAGACT | + |
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Preference number: 3 (lower is better) Translates to: FSLVSLPNMVCW*AYGDARTDHKT Trigger: AGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATACCATGTTTGGTAGAGAGACCAGTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR CCA 72 bp | CTTGGTTATTATTCTCACTGGTCTCTCTACCAAACATaGTATGTTGGTGGGCATATGGAGATGCCAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: LGYYSHWSLYQT*YVGGHMEMPEL Trigger: CAGTTCTGGCATCTCCATATGCCCACCAACATACCATGTTTGGTAGAGAGACCAGTGAGAATAATAACCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR-3UTR CAA 90 bp | GGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAATAATGAGAAGAAGTTCAGTAGCTaGCTCAGGGTCATTTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: GGHMEMPELIIRLPSNNEKKFSS*LRVISV Trigger: TACAGAAATGACCCTGAGCAAGCTACTGAACTTCTT...CTCATTATTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR CCA 72 bp | TTATTCTCACTGGTCTCTCTACCAAACATGGTATGTTaGTGGGCATATGGAGATGCCAGAACTGATCATAAG | + |
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Preference number: 3 (lower is better) Translates to: LFSLVSLPNMVC*WAYGDARTDHK Trigger: CTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATACCATGTTTGGTAGAGAGACCAGTGAGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR-3UTR CAA 90 bp | CTTAGCCCTACCCTTGATCTACTGAAGCAGAAAATTACTGCCTTAATTCTGTGTCACCGTCATGTAAAGTaGGTATGTGTCTTTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LSPTLDLLKQKITALILCHRHVK*VCVFAP Trigger: TGGAGCAAAGACACATACCAACTTTACATGACGGTG...ACACAGAATTAAGGCAGTAATTTTCTGCTTCAGTAGATCAAGGGTAGGGCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR-3UTR CAA 90 bp | ATAGACAGAATACATGCTCTTTATACGGTCGAGAGGAAAGATGACTACTTTAGGAACATCAAATACCACTaGTCCACTGGGAACAATTCA | + |
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Preference number: 3 (lower is better) Translates to: IDRIHALYTVERKDDYFRNIKYH*STGNNS Trigger: TGAATTGTTCCCAGTGGACAAGTGGTATTTGATGTT...CCTAAAGTAGTCATCTTTCCTCTCGACCGTATAAAGAGCATGTATTCTGTCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR GCA 72 bp | AGGAAAAATTTCAGTCACTCAAATTCCTCTGTGGAATaGATTCTGGAACATTTAGATGGGGGTGTATTTATC | + |
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Preference number: 3 (lower is better) Translates to: RKNFSHSNSSVE*ILEHLDGGVFI Trigger: GATAAATACACCCCCATCTAAATGTTCCAGAATGCATTCCACAGAGGAATTTGAGTGACTGAAATTTTTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR GCA 72 bp | AGTATCCAACCTTCTATAAAAAGTAGCAGCTTTATATaGCATGAGCAGAGGAAAGATAGCAATAAGAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: SIQPSIKSSSFI*HEQRKDSNKKG Trigger: ACCCTTCTTATTGCTATCTTTCCTCTGCTCATGGCATATAAAGCTGCTACTTTTTATAGAAGGTTGGATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| 3UTR GCA 72 bp | TTTCTCACACCGTCATGTAAAGTTGGTATGTGTCTTTaGTCCATTAAAGTATTTCTGACCTCAATCTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: FLTPSCKVGMCL*SIKVFLTSILN Trigger: GTTTAAGATTGAGGTCAGAAATACTTTAATGGAGCAAAGACACATACCAACTTTACATGACGGTGTGAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR CCA 72 bp | TCCACTGGGAACAATTCAGCTTTCTATCAGTTGAGTTaGTTAGATCACATTAAGTTGTTATGTATAGGTATT | + |
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Preference number: 3 (lower is better) Translates to: STGNNSAFYQLS*LDHIKLLCIGI Trigger: AATACCTATACATAACAACTTAATGTGATCTAACCAACTCAACTGATAGAAAGCTGAATTGTTCCCAGTGGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CCA 90 bp | GAAGGGTGTCATCTGCTCACCACAGACAAGGGGAAGCCAATAGCTTCCTGCTACCCCTCCATCGTCGGTTaGGGACCCGGCTCCGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: EGCHLLTTDKGKPIASCYPSIVG*GPGSGP Trigger: AGGGCCGGAGCCGGGTCCCCAACCGACGATGGAGGG...GTAGCAGGAAGCTATTGGCTTCCCCTTGTCTGTGGTGAGCAGATGACACCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR CCA 90 bp | CTTAGCCCTACCCTTGATCTACTGAAGCAGAAAATTACTGCCTTAATTCTGTGTCCCTCCATCGTCGGTTaGGGACCCGGCTCCGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LSPTLDLLKQKITALILCPSIVG*GPGSGP Trigger: AGGGCCGGAGCCGGGTCCCCAACCGACGATGGAGGG...ACACAGAATTAAGGCAGTAATTTTCTGCTTCAGTAGATCAAGGGTAGGGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR GCA 90 bp | GAAGGGTGTCATCTGCTCACCACAGACAAGGGGAAGCCAATAGCTTCCTGCTACAAGAAGGGTGTCATCTaGTCACCACAGACAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: EGCHLLTTDKGKPIASCYKKGVI*SPQTRG Trigger: TCCCCTTGTCTGTGGTGAGCAGATGACACCCTTCTT...GTAGCAGGAAGCTATTGGCTTCCCCTTGTCTGTGGTGAGCAGATGACACCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR GCA 90 bp | TATGCCATGAGCAGAGGAAAGATAGCAATAAGAAGGGTGTCATCTGCTCACCACATGATCTCAGCTCACTaGAAGCTCTGCCTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: YAMSRGKIAIRRVSSAHHMISAH*KLCLLG Trigger: ACCCAGGAGGCAGAGCTTGCAGTGAGCTGAGATCAT...GTGGTGAGCAGATGACACCCTTCTTATTGCTATCTTTCCTCTGCTCATGGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR CCA 90 bp | ATGATTCACAACAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTCCTCTCATGGTCCTTTaGCCCAGAGCTGTTCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: MIHNNCLLNTTGSAFPYFPLMVL*PRAVRR Trigger: GCGCCGAACAGCTCTGGGCCAAAGGACCATGAGAGG...AAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTGTTGTGAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CCA 90 bp | GGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAATAATGAGAGGATTGAGCCACAGTaGAAGCACAGAGGCAAACAC | + |
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Preference number: 4 (lower is better) Translates to: GGHMEMPELIIRLPSNNERIEPQ*KHRGKH Trigger: GTGTTTGCCTCTGTGCTTCCACTGTGGCTCAATCCT...CTCATTATTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR TCA 90 bp | GGAGTGGTTTCAGCTCCAACACGATTCCAGGAGCAAGTGCTAAACTTTGATAGGCTACCCTTGATCTACTaGAGCAGAAAATTACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GVVSAPTRFQEQVLNFDRLPLIY*SRKLLP Trigger: AGGCAGTAATTTTCTGCTTCAGTAGATCAAGGGTAG...CCTATCAAAGTTTAGCACTTGCTCCTGGAATCGTGTTGGAGCTGAAACCACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR GCA 90 bp | TATGCCATGAGCAGAGGAAAGATAGCAATAAGAAGGGTGTCATCTGCTCACCACGCCTTTGTAAGGGCTTaGTCTTCTAACAATGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: YAMSRGKIAIRRVSSAHHAFVRA*SSNNGP Trigger: AGGACCATTGTTAGAAGAGCAAGCCCTTACAAAGGC...GTGGTGAGCAGATGACACCCTTCTTATTGCTATCTTTCCTCTGCTCATGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR CCA 90 bp | TATGCCATGAGCAGAGGAAAGATAGCAATAAGAAGGGTGTCATCTGCTCACCACAACATGGTATGTTGGTaGGCATATGGAGATGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: YAMSRGKIAIRRVSSAHHNMVCW*AYGDAR Trigger: TCTGGCATCTCCATATGCCCACCAACATACCATGTT...GTGGTGAGCAGATGACACCCTTCTTATTGCTATCTTTCCTCTGCTCATGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR CCA 90 bp | GGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAATAATGAGCCAAACATGGTATGTTaGTGGGCATATGGAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: GGHMEMPELIIRLPSNNEPNMVC*WAYGDA Trigger: GGCATCTCCATATGCCCACCAACATACCATGTTTGG...CTCATTATTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR TCA 90 bp | TATGCCATGAGCAGAGGAAAGATAGCAATAAGAAGGGTGTCATCTGCTCACCACATTTCTGTAAGTAAATaGCAGAGCCAGGATGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: YAMSRGKIAIRRVSSAHHISVSK*QSQDGN Trigger: GTTCCCATCCTGGCTCTGTCATTTACTTACAGAAAT...GTGGTGAGCAGATGACACCCTTCTTATTGCTATCTTTCCTCTGCTCATGGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR CCA 90 bp | GGAGTGGTTTCAGCTCCAACACGATTCCAGGAGCAAGTGCTAAACTTTGATAGGATACCACTTGTCCACTaGGAACAATTCAGCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: GVVSAPTRFQEQVLNFDRIPLVH*EQFSFL Trigger: TAGAAAGCTGAATTGTTCCCAGTGGACAAGTGGTAT...CCTATCAAAGTTTAGCACTTGCTCCTGGAATCGTGTTGGAGCTGAAACCACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CCA 90 bp | TATGCCATGAGCAGAGGAAAGATAGCAATAAGAAGGGTGTCATCTGCTCACCACTCTCTCTACCAAACATaGTATGTTGGTGGGCATATG | + |
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Preference number: 4 (lower is better) Translates to: YAMSRGKIAIRRVSSAHHSLYQT*YVGGHM Trigger: CATATGCCCACCAACATACCATGTTTGGTAGAGAGA...GTGGTGAGCAGATGACACCCTTCTTATTGCTATCTTTCCTCTGCTCATGGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR TCA 90 bp | ATAGACAGAATACATGCTCTTTATACGGTCGAGAGGAAAGATGACTACTTTAGGCCACAGCAATACAGGTaGGGCAAGGGTCTATATTCC | + |
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Preference number: 4 (lower is better) Translates to: IDRIHALYTVERKDDYFRPQQYR*GKGLYS Trigger: GGAATATAGACCCTTGCCTCACCTGTATTGCTGTGG...CCTAAAGTAGTCATCTTTCCTCTCGACCGTATAAAGAGCATGTATTCTGTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CCA 90 bp | CAAACATGGTATGTTGGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTAGATGGGAACCCAGATTaGTCTGACTCTAAAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QTWYVGGHMEMPELIIRLDGNPD*SDSKAQ Trigger: TTGTGCTTTAGAGTCAGACCAATCTGGGTTCCCATC...TAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATACCATGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| CDS-3UTR TCA 90 bp | ATAGACAGAATACATGCTCTTTATACGGTCGAGAGGAAAGATGACTACTTTAGGTGCCTTAATTCTGTGTaGTACAGGTCAGCCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IDRIHALYTVERKDDYFRCLNSV*YRSACL Trigger: AAGGCAGGCTGACCTGTATCACACAGAATTAAGGCA...CCTAAAGTAGTCATCTTTCCTCTCGACCGTATAAAGAGCATGTATTCTGTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAATAATGAGTATCTCAAGTTACACTaGGTGAGAAGCGATGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GGHMEMPELIIRLPSNNEYLKLH*VRSDAL Trigger: TAAAGCATCGCTTCTCACTCAGTGTAACTTGAGATA...CTCATTATTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| CDS-3UTR GCA 90 bp | GGAGTGGTTTCAGCTCCAACACGATTCCAGGAGCAAGTGCTAAACTTTGATAGGATCTGTTTTTACCTTTaGTCTATCAGACCATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVVSAPTRFQEQVLNFDRICFYL*SIRPSK Trigger: TTTGGATGGTCTGATAGAGCAAAGGTAAAAACAGAT...CCTATCAAAGTTTAGCACTTGCTCCTGGAATCGTGTTGGAGCTGAAACCACTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR GCA 90 bp | TTTAAAGAGAGAACACTTTCAGAACATAGGATTGAGCCACAGTGGAAGCACAGAAAGCCAATAGCTTCCTaGTACTGCCTTTCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FKERTLSEHRIEPQWKHRKPIAS*YCLSGK Trigger: CTTTCCTGAAAGGCAGTAGCAGGAAGCTATTGGCTT...TCTGTGCTTCCACTGTGGCTCAATCCTATGTTCTGAAAGTGTTCTCTCTTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR TCA 90 bp | CTTAGCCCTACCCTTGATCTACTGAAGCAGAAAATTACTGCCTTAATTCTGTGTCCTGACCTAGTGCCATaGTTCAAATTCACAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPTLDLLKQKITALILCPDLVP*FKFTTL Trigger: AAGAGTTGTGAATTTGAATCATGGCACTAGGTCAGG...ACACAGAATTAAGGCAGTAATTTTCTGCTTCAGTAGATCAAGGGTAGGGCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR CCA 90 bp | CTTAGCCCTACCCTTGATCTACTGAAGCAGAAAATTACTGCCTTAATTCTGTGTAACATTTTCACACTATaGCCTTTCCCATTAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTLDLLKQKITALILCNIFTL*PFPLRP Trigger: GGGCCTTAATGGGAAAGGCCATAGTGTGAAAATGTT...ACACAGAATTAAGGCAGTAATTTTCTGCTTCAGTAGATCAAGGGTAGGGCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAATAATGAGCTACTGTCAGAGAAATaGATGTATACTCCAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGHMEMPELIIRLPSNNELLSEK*MYTPNQ Trigger: CTGATTTGGAGTATACATCCATTTCTCTGACAGTAG...CTCATTATTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| CDS-3UTR TCA 90 bp | CTTAGCCCTACCCTTGATCTACTGAAGCAGAAAATTACTGCCTTAATTCTGTGTGTCTCATTCCTCATTTaGCAAATGAGGACAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTLDLLKQKITALILCVSFLI*QMRTNH Trigger: GTGATTTGTCCTCATTTGTCAAATGAGGAATGAGAC...ACACAGAATTAAGGCAGTAATTTTCTGCTTCAGTAGATCAAGGGTAGGGCTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR TCA 90 bp | CTTAGCCCTACCCTTGATCTACTGAAGCAGAAAATTACTGCCTTAATTCTGTGTGTTATGTATAGGTATTaGCCAGAAGCCTACAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPTLDLLKQKITALILCVMYRY*PEAYNE Trigger: CTCATTGTAGGCTTCTGGTCAATACCTATACATAAC...ACACAGAATTAAGGCAGTAATTTTCTGCTTCAGTAGATCAAGGGTAGGGCTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR GCA 90 bp | GACTACTTTAGGCAGAAACTCCCAGTAAGATCATGTCTATATTTGCTATTAGGTGCCTTTGTAAGGGCTTaGTCTTCTAACAATGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DYFRQKLPVRSCLYLLLGAFVRA*SSNNGP Trigger: AGGACCATTGTTAGAAGAGCAAGCCCTTACAAAGGC...ACCTAATAGCAAATATAGACATGATCTTACTGGGAGTTTCTGCCTAAAGTAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR GCA 90 bp | GTATGTTGGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAACTGAGTGAGAAGCGATaGTTTAAAATTATCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: VCWWAYGDARTDHKTTLKLSEKR*FKIIQI Trigger: GATTTGGATAATTTTAAAGCATCGCTTCTCACTCAG...TTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| CDS-3UTR CCA 90 bp | CCAGATTGGTCTGACTCTAAAGCACAAACTCTTCTTCCCTTTACACCAAGGATAGAAGTACATATAACATaGGACCTTAATGAGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDWSDSKAQTLLPFTPRIEVHIT*DLNEVR Trigger: TCTGACCTCATTAAGGTCCCATGTTATATGTACTTC...TATCCTTGGTGTAAAGGGAAGAAGAGTTTGTGCTTTAGAGTCAGACCAATCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| 3UTR CAA 72 bp | ATATATTTAAAGAGAGAACACTTTCAGAACATAGGATaGAGCCACAGTGGAAGCACAGAGGCAAACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYLKREHFQNIG*SHSGSTEANTG Trigger: ACCAGTGTTTGCCTCTGTGCTTCCACTGTGGCTCAATCCTATGTTCTGAAAGTGTTCTCTCTTTAAATATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| CDS-3UTR TCA 90 bp | GACTACTTTAGGCAGAAACTCCCAGTAAGATCATGTCTATATTTGCTATTAGGTAGTGGTTTTCCCACATaGTTTTTCTGGACCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DYFRQKLPVRSCLYLLLGSGFPT*FFWTFE Trigger: CTCAAAGGTCCAGAAAAATCATGTGGGAAAACCACT...ACCTAATAGCAAATATAGACATGATCTTACTGGGAGTTTCTGCCTAAAGTAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR GCA 90 bp | CAAACATGGTATGTTGGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTAATCTGTTTTTACCTTTaGTCTATCAGACCATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTWYVGGHMEMPELIIRLICFYL*SIRPSK Trigger: TTTGGATGGTCTGATAGAGCAAAGGTAAAAACAGAT...TAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATACCATGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| CDS-3UTR GCA 90 bp | ATAGACAGAATACATGCTCTTTATACGGTCGAGAGGAAAGATGACTACTTTAGGTGCTATTCCAGATACTaGTCAGCAAACTGTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: IDRIHALYTVERKDDYFRCYSRY*SANCST Trigger: TGTAGAACAGTTTGCTGAGCAGTATCTGGAATAGCA...CCTAAAGTAGTCATCTTTCCTCTCGACCGTATAAAGAGCATGTATTCTGTCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR GCA 90 bp | CAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTGTAAAATCGAACCCAAATTTCCTTCCTaGTATTCCAGATACTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLPTKYNWKCLSLFCKIEPKFPS*YSRYCS Trigger: TGAGCAGTATCTGGAATAGCAGGAAGGAAATTTGGG...TTCGATTTTACAAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR GCA 90 bp | CCAGATTGGTCTGACTCTAAAGCACAAACTCTTCTTCCCTTTACACCAAGGATATTTTGTAATAAAGTTTaGCATGGAGTGCTCTACCTA | + |
|
Preference number: 4 (lower is better) Translates to: PDWSDSKAQTLLPFTPRIFCNKV*HGVLYL Trigger: TAGGTAGAGCACTCCATGGCAAACTTTATTACAAAA...TATCCTTGGTGTAAAGGGAAGAAGAGTTTGTGCTTTAGAGTCAGACCAATCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| 3UTR CAA 72 bp | AGCAGTGGAGTGCCATTCATCATACTCCATGTCGTATaGCACTCAATTTATAAAACATTTTCACACTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGVPFIILHVV*HSIYKTFSHYG Trigger: GCCATAGTGTGAAAATGTTTTATAAATTGAGTGCAATACGACATGGAGTATGATGAATGGCACTCCACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR TCA 90 bp | TACACCAAGGATATAACGAATCTGTCAGTACTTGAAACAATTCCGAAAGATTCTAGTGGTTTTCCCACATaGTTTTTCTGGACCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTKDITNLSVLETIPKDSSGFPT*FFWTFE Trigger: CTCAAAGGTCCAGAAAAATCATGTGGGAAAACCACT...AGAATCTTTCGGAATTGTTTCAAGTACTGACAGATTCGTTATATCCTTGGTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| CDS-3UTR TCA 90 bp | ATGATTCACAACAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTGGACAAATCACTCCTTaGGAACTAAGGTCATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MIHNNCLLNTTGSAFPYFGQITP*ELRSFQ Trigger: TTGAAATGACCTTAGTTCTCAAGGAGTGATTTGTCC...AAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTGTTGTGAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR TCA 90 bp | ATAGACAGAATACATGCTCTTTATACGGTCGAGAGGAAAGATGACTACTTTAGGACCAGAAGCCTACAATaGGATACAGATTTTACACTA | + |
|
Preference number: 4 (lower is better) Translates to: IDRIHALYTVERKDDYFRTRSLQ*DTDFTL Trigger: TAGTGTAAAATCTGTATCTCATTGTAGGCTTCTGGT...CCTAAAGTAGTCATCTTTCCTCTCGACCGTATAAAGAGCATGTATTCTGTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR GCA 90 bp | CTTAGCCCTACCCTTGATCTACTGAAGCAGAAAATTACTGCCTTAATTCTGTGTGTTGGTATGTGTCTTTaGTCCATTAAAGTATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPTLDLLKQKITALILCVGMCL*SIKVFL Trigger: CAGAAATACTTTAATGGAGCAAAGACACATACCAAC...ACACAGAATTAAGGCAGTAATTTTCTGCTTCAGTAGATCAAGGGTAGGGCTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR GCA 90 bp | GCAGTGGAGTGCCATTCATCATACTCCATGTCGTATTGCACTCAATTTATAAAATATAGACAGAATACATaGTCTTTATACGGTCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVECHSSYSMSYCTQFIKYRQNT*SLYGRE Trigger: CTCTCGACCGTATAAAGAGCATGTATTCTGTCTATA...TTTTATAAATTGAGTGCAATACGACATGGAGTATGATGAATGGCACTCCACTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CCA 90 bp | TCCCTTTACACCAAGGATATAACGAATCTGTCAGTACTTGAAACAATTCCGAAAGGTTATTATTCTCACTaGTCTCTCTACCAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLYTKDITNLSVLETIPKGYYSH*SLYQTW Trigger: CCATGTTTGGTAGAGAGACCAGTGAGAATAATAACC...TTTCGGAATTGTTTCAAGTACTGACAGATTCGTTATATCCTTGGTGTAAAGGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR GCA 90 bp | GCAGTGGAGTGCCATTCATCATACTCCATGTCGTATTGCACTCAATTTATAAAAATGATTCACAACAACTaGCTACTAAATACAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVECHSSYSMSYCTQFIKMIHNN*LLNTTG Trigger: TCCAGTTGTATTTAGTAGGCAGTTGTTGTGAATCAT...TTTTATAAATTGAGTGCAATACGACATGGAGTATGATGAATGGCACTCCACTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CCA 90 bp | ATAGACAGAATACATGCTCTTTATACGGTCGAGAGGAAAGATGACTACTTTAGGAGGGTACACAGAATATaGAAAAAGTCATCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IDRIHALYTVERKDDYFRRVHRI*KKSSLH Trigger: ATGAAGTGATGACTTTTTCCATATTCTGTGTACCCT...CCTAAAGTAGTCATCTTTCCTCTCGACCGTATAAAGAGCATGTATTCTGTCTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CCA 90 bp | GACTACTTTAGGCAGAAACTCCCAGTAAGATCATGTCTATATTTGCTATTAGGTCCTTTCTATTACAGGTaGGGTCTTTTATATGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DYFRQKLPVRSCLYLLLGPFYYR*GLLYVS Trigger: TGAGACATATAAAAGACCCCACCTGTAATAGAAAGG...ACCTAATAGCAAATATAGACATGATCTTACTGGGAGTTTCTGCCTAAAGTAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CCA 90 bp | ATGATTCACAACAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTACTCAAATTCCTCTGTaGAATGCATTCTGGAACATT | + |
|
Preference number: 4 (lower is better) Translates to: MIHNNCLLNTTGSAFPYFTQIPL*NAFWNI Trigger: AATGTTCCAGAATGCATTCCACAGAGGAATTTGAGT...AAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTGTTGTGAATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR GCA 90 bp | CAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTGTAAAATCGAAAATTCCTCTGTGGAATaGATTCTGGAACATTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QLPTKYNWKCLSLFCKIENSSVE*ILEHLD Trigger: ATCTAAATGTTCCAGAATGCATTCCACAGAGGAATT...TTCGATTTTACAAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR CAA 72 bp | CATGATTCAAATTCACAACTCTTGATAGCTAAGACTTaGACTGCTCCAACTAGCAAATCACATATAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HDSNSQLLIAKT*TAPTSKSHIAI Trigger: AATGGCTATATGTGATTTGCTAGTTGGAGCAGTCAAAGTCTTAGCTATCAAGAGTTGTGAATTTGAATCATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR CAA 72 bp | GCTTTCTATCAGTTGAGTTGGTTAGATCACATTAAGTaGTTATGTATAGGTATTGACCAGAAGCCTACAATG | + |
|
Preference number: 4 (lower is better) Translates to: AFYQLSWLDHIK*LCIGIDQKPTM Trigger: CATTGTAGGCTTCTGGTCAATACCTATACATAACAACTTAATGTGATCTAACCAACTCAACTGATAGAAAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| 3UTR CAA 72 bp | CACTTGTCCACTGGGAACAATTCAGCTTTCTATCAGTaGAGTTGGTTAGATCACATTAAGTTGTTATGTATA | + |
|
Preference number: 4 (lower is better) Translates to: HLSTGNNSAFYQ*SWLDHIKLLCI Trigger: TATACATAACAACTTAATGTGATCTAACCAACTCAACTGATAGAAAGCTGAATTGTTCCCAGTGGACAAGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CAA 90 bp | GTATGTTGGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAATCCCTCCATCGTCGGTaGGGGACCCGGCTCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCWWAYGDARTDHKTTLKSLHRR*GTRLRP Trigger: GGGCCGGAGCCGGGTCCCCAACCGACGATGGAGGGA...TTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491535.5 |
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| CDS-3UTR CAA 90 bp | CAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTGTAAAATCGAATCCCTCCATCGTCGGTaGGGGACCCGGCTCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QLPTKYNWKCLSLFCKIESLHRR*GTRLRP Trigger: GGGCCGGAGCCGGGTCCCCAACCGACGATGGAGGGA...TTCGATTTTACAAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CAA 90 bp | ATAGACAGAATACATGCTCTTTATACGGTCGAGAGGAAAGATGACTACTTTAGGCCCTCTCATGGTCCTTaGGCCCAGAGCTGTTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: IDRIHALYTVERKDDYFRPSHGP*AQSCSA Trigger: CGCCGAACAGCTCTGGGCCAAAGGACCATGAGAGGG...CCTAAAGTAGTCATCTTTCCTCTCGACCGTATAAAGAGCATGTATTCTGTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR CAA 90 bp | CTTAGCCCTACCCTTGATCTACTGAAGCAGAAAATTACTGCCTTAATTCTGTGTTCCACCGCCGCCTTCTaGTCTCTTTTGCCAAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPTLDLLKQKITALILCSTAAF*SLLPRG Trigger: CCCCCTTGGCAAAAGAGACAAGAAGGCGGCGGTGGA...ACACAGAATTAAGGCAGTAATTTTCTGCTTCAGTAGATCAAGGGTAGGGCTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR CAA 90 bp | GGAGTGGTTTCAGCTCCAACACGATTCCAGGAGCAAGTGCTAAACTTTGATAGGTTGATAGCTAAGACTTaGACTGCTCCAACTAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVVSAPTRFQEQVLNFDRLIAKT*TAPTSK Trigger: TTTGCTAGTTGGAGCAGTCAAAGTCTTAGCTATCAA...CCTATCAAAGTTTAGCACTTGCTCCTGGAATCGTGTTGGAGCTGAAACCACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR CAA 90 bp | CCAGATTGGTCTGACTCTAAAGCACAAACTCTTCTTCCCTTTACACCAAGGATAACCAAACATGGTATGTaGGTGGGCATATGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: PDWSDSKAQTLLPFTPRITKHGM*VGIWRC Trigger: GCATCTCCATATGCCCACCAACATACCATGTTTGGT...TATCCTTGGTGTAAAGGGAAGAAGAGTTTGTGCTTTAGAGTCAGACCAATCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| CDS-3UTR CAA 90 bp | CAAACATGGTATGTTGGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTAAAGAAGTTCAGTAGCTaGCTCAGGGTCATTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QTWYVGGHMEMPELIIRLKKFSS*LRVISV Trigger: TACAGAAATGACCCTGAGCAAGCTACTGAACTTCTT...TAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATACCATGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| CDS TCA 90 bp | ACTCTGGCAAAGCTGAAGGCCAGTAACTCATTAAGATTTGATTCCTaGATATCAGCTACTGACAGATTAGGTCACATGCCTGTTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLAKLKASNSLRFDS*ISATDRLGHMPVKS Trigger: AGACTTAACAGGCATGTGACCTAATCTGTCAGTAGCTGATATTCAGGAATCAAATCTTAATGAGTTACTGGCCTTCAGCTTTGCCAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305752.4 |
||
| CDS-3UTR CAA 90 bp | GTATGTTGGTGGGCATATGGAGATGCCAGAACTGATCATAAGACTACCCTCAAAGATTTTTCTGGACCTTaGAGAGAATATCTTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VCWWAYGDARTDHKTTLKDFSGP*REYLSP Trigger: AGGTGAAAGATATTCTCTCAAAGGTCCAGAAAAATC...TTTGAGGGTAGTCTTATGATCAGTTCTGGCATCTCCATATGCCCACCAACATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491535.5 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGAGTGCCATTCATCATACTCCATGTCGTATTGCACTCAATTTATAAAATTGTCATGCCTCCTCTaGTCACAGATACAGGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: AVECHSSYSMSYCTQFIKLSCLL*SQIQVI Trigger: TATTACCTGTATCTGTGACAAGAGGAGGCATGACAA...TTTTATAAATTGAGTGCAATACGACATGGAGTATGATGAATGGCACTCCACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR CAA 90 bp | GACTACTTTAGGCAGAAACTCCCAGTAAGATCATGTCTATATTTGCTATTAGGTAGGACAAATCACTCCTaGAGAACTAAGGTCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DYFRQKLPVRSCLYLLLGRTNHS*RTKVIS Trigger: TGAAATGACCTTAGTTCTCAAGGAGTGATTTGTCCT...ACCTAATAGCAAATATAGACATGATCTTACTGGGAGTTTCTGCCTAAAGTAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR CAA 90 bp | CAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTGTAAAATCGAAAACATCAAATACCACTaGTCCACTGGGAACAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLPTKYNWKCLSLFCKIENIKYH*STGNNS Trigger: TGAATTGTTCCCAGTGGACAAGTGGTATTTGATGTT...TTCGATTTTACAAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397609.6 |
||
| CDS-3UTR CAA 90 bp | GACTACTTTAGGCAGAAACTCCCAGTAAGATCATGTCTATATTTGCTATTAGGTAGATCATGTCTATATTaGCTATTAGGTACCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: DYFRQKLPVRSCLYLLLGRSCLY*LLGTRL Trigger: CAGCCTGGTACCTAATAGCAAATATAGACATGATCT...ACCTAATAGCAAATATAGACATGATCTTACTGGGAGTTTCTGCCTAAAGTAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CAA 90 bp | CAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTGTAAAATCGAAGATTTTTCTGGACCTTaGAGAGAATATCTTTCACCT | + |
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Preference number: 5 (lower is better) Translates to: QLPTKYNWKCLSLFCKIEDFSGP*REYLSP Trigger: AGGTGAAAGATATTCTCTCAAAGGTCCAGAAAAATC...TTCGATTTTACAAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS-3UTR CAA 90 bp | ATGATTCACAACAACTGCCTACTAAATACAACTGGAAGTGCCTTTCCCTATTTTTCAGCTTTCTATCAGTaGAGTTGGTTAGATCACATT | + |
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Preference number: 5 (lower is better) Translates to: MIHNNCLLNTTGSAFPYFSAFYQ*SWLDHI Trigger: AATGTGATCTAACCAACTCAACTGATAGAAAGCTGA...AAAATAGGGAAAGGCACTTCCAGTTGTATTTAGTAGGCAGTTGTTGTGAATCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397609.6 |
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| CDS CCA 72 bp | ACCACCACCACCACCACCACCACCACCTCCTCCATATaGATCTTTGAGAGAATATCTTTCACCTTTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: TTTTTTTTTSSI*IFERISFTFDS Trigger: GGAATCAAAGGTGAAAGATATTCTCTCAAAGATCCATATGGAGGAGGTGGTGGTGGTGGTGGTGGTGGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559431.1 |
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