RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM98A (Homo sapiens)

Ensembl gene IDs: ENSG00000119812

Ensembl transcript IDs: ENST00000238823.13, ENST00000403368.1, ENST00000431950.1, ENST00000464415.1, ENST00000474985.5, ENST00000475122.1, ENST00000492649.1, ENST00000498340.5

Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGCTGCTGGGGGCCATCTTGCCTCTTCTGCCACGGTGGCATCTCTaGGGGTGGAGGTTCGATTTCATTGGGTCTACCACCTCTGTCAGG +
Preference number: 1 (lower is better)
Translates to: LLLGAILPLLPRWHL*GWRFDFIGSTTSVR
Trigger: CCTGACAGAGGTGGTAGACCCAATGAAATCGAACCTCCACCCCCAGAGATGCCACCGTGGCAGAAGAGGCAAGATGGCCCCCAGCAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR TCA 90 bp GCCACCACTGCTGTGGCCACCATGATAGCCACCTGGCTGGAAACCTaGATCTCGATAACCACCATCTTGGTAGCCACCTCCTCCACCACT +
Preference number: 1 (lower is better)
Translates to: ATTAVATMIATWLET*ISITTILVATSSTT
Trigger: AGTGGTGGAGGAGGTGGCTACCAAGATGGTGGTTATCGAGATTCAGGTTTCCAGCCAGGTGGCTATCATGGTGGCCACAGCAGTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR GCA 90 bp AAGATGTTTGGAAGCCACCATAACCTCCGCCTTGATAGCCACCACTaGTGTGGCCACCATGATAGCCACCTGGCTGGAAACCTGAATCTC +
Preference number: 1 (lower is better)
Translates to: KMFGSHHNLRLDSHH*CGHHDSHLAGNLNL
Trigger: GAGATTCAGGTTTCCAGCCAGGTGGCTATCATGGTGGCCACAGCAGTGGTGGCTATCAAGGCGGAGGTTATGGTGGCTTCCAAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR TCA 90 bp CACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTaGCAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTC +
Preference number: 1 (lower is better)
Translates to: HLSHKAHLQPFSFTA*QCLHVQKPSKKHHV
Trigger: GACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CCA 90 bp TCGGCCACCATGGTCATAGCCACCACGTCCACCTCTCCCGCCTCCTTGTTCATGCCTCCTGTTTGCTGCTaGGGGCCATCTTGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: SATMVIATTSTSPASLFMPPVCC*GPSCLF
Trigger: GAAGAGGCAAGATGGCCCCCAGCAGCAAACAGGAGG...CATGAACAAGGAGGCGGGAGAGGTGGACGTGGTGGCTATGACCATGGTGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR GCA 90 bp TCGGCCACCATGGTCATAGCCACCACGTCCACCTCTCCCGCCTCCTTGTTCATGTGCCAAGCAGGAATCTaGCTGCCACCTGTGGTCTCA +
Preference number: 2 (lower is better)
Translates to: SATMVIATTSTSPASLFMCQAGI*LPPVVS
Trigger: TGAGACCACAGGTGGCAGGCAGATTCCTGCTTGGCA...CATGAACAAGGAGGCGGGAGAGGTGGACGTGGTGGCTATGACCATGGTGGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR GCA 90 bp ACCACGATCACCATGGTGCCCGCCATCTTGGTATCTATTGTCCTGCTGGTAGCCCCATCTTGCCTCTTCTaGCACGGTGGCATCTCTGGG +
Preference number: 2 (lower is better)
Translates to: TTITMVPAILVSIVLLVAPSCLF*HGGISG
Trigger: CCCAGAGATGCCACCGTGGCAGAAGAGGCAAGATGG...GGCTACCAGCAGGACAATAGATACCAAGATGGCGGGCACCATGGTGATCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR CCA 90 bp CAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACACCTCTTCTGCCACGGTaGCATCTCTGGGGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: QSTPPAIFFHSLTMFTCTPLLPR*HLWGWR
Trigger: CCTCCACCCCCAGAGATGCCACCGTGGCAGAAGAGG...TGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR CCA 90 bp TTCCATCAACAAAATAAGGCTACTGAATGTGCTATCTGCAAAAGAGCTCATTTACCCCAGCCTCCTCCCTaGCCTGCACGACCACCTCGG +
Preference number: 2 (lower is better)
Translates to: FHQQNKATECAICKRAHLPQPPP*PARPPR
Trigger: CCGAGGTGGTCGTGCAGGCCAGGGAGGAGGCTGGGG...TAAATGAGCTCTTTTGCAGATAGCACATTCAGTAGCCTTATTTTGTTGATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR GCA 90 bp CTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTGCTGGGGGCCATCTTaGCTCTTCTGCCACGGTGGC +
Preference number: 2 (lower is better)
Translates to: LSQLDNVYMYKNPARSIMCWGPS*LFCHGG
Trigger: GCCACCGTGGCAGAAGAGGCAAGATGGCCCCCAGCA...CATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR GCA 90 bp CTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGCCTCGGCCTCCTGTTTaGTGCTGGGGGCCATCTTGC +
Preference number: 2 (lower is better)
Translates to: LSQLDNVYMYKNPARSIMPRPPV*CWGPSC
Trigger: GCAAGATGGCCCCCAGCAGCAAACAGGAGGCCGAGG...CATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR GCA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACCGGCCTCCTGTTTGCTaGTGGGGGCCATCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNRPPVC*WGPSCL
Trigger: GAGGCAAGATGGCCCCCAGCAGCAAACAGGAGGCCG...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR TCA 90 bp ATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAACTTTGTAGTGCATCCGCCTCCTTGTTCATaGCCTCCTCGTCCTCCGTAT +
Preference number: 2 (lower is better)
Translates to: IIKGLLHLAKICLNFVVHPPPCS*PPRPPY
Trigger: ATACGGAGGACGAGGAGGTCATGAACAAGGAGGCGG...ATGCACTACAAAGTTAAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR GCA 90 bp TTGTTTTCTGCAGCAATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTTGCCAAGCAGGAATCTaGCTGCCACCTGTGGTCTCA +
Preference number: 2 (lower is better)
Translates to: LFSAAIIKGLLHLAKICLCQAGI*LPPVVS
Trigger: TGAGACCACAGGTGGCAGGCAGATTCCTGCTTGGCA...AAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTATTGCTGCAGAAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR GCA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCACTTGATAGCCACCACTaGTGTGGCCACCATGATAGC +
Preference number: 2 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPLDSHH*CGHHDS
Trigger: GCTATCATGGTGGCCACAGCAGTGGTGGCTATCAAG...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR CCA 90 bp TTCCATCAACAAAATAAGGCTACTGAATGTGCTATCTGCAAAAGAGCTCATTTACCACGGTGGCATCTCTaGGGGTGGAGGTTCGATTTC +
Preference number: 2 (lower is better)
Translates to: FHQQNKATECAICKRAHLPRWHL*GWRFDF
Trigger: GAAATCGAACCTCCACCCCCAGAGATGCCACCGTGG...TAAATGAGCTCTTTTGCAGATAGCACATTCAGTAGCCTTATTTTGTTGATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR TCA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTATCCTCGTCCTCCGTATaGGGAATGTTCATAGCCACC +
Preference number: 2 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVSSSSV*GMFIAT
Trigger: GGTGGCTATGAACATTCCTCATACGGAGGACGAGGA...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR TCA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCTCTGTCCAGCCTCCTTaGTGCTTATTTCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFSVQPP*CLFPLP
Trigger: AGGAAGAGGAAATAAGCATCAAGGAGGCTGGACAGA...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR GCA 90 bp ATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAACTTTGTAGTGCATCCACGATCACCATGGTaGCCGCCATCTTGGTATCTA +
Preference number: 2 (lower is better)
Translates to: IIKGLLHLAKICLNFVVHPRSPW*PPSWYL
Trigger: TAGATACCAAGATGGCGGGCACCATGGTGATCGTGG...ATGCACTACAAAGTTAAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR CCA 90 bp CCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGGAGGTTCGATTTCATTaGGTCTACCACCTCTGTCAG +
Preference number: 2 (lower is better)
Translates to: PPAIFFHSLTMFTCTKTQEVRFH*VYHLCQ
Trigger: CTGACAGAGGTGGTAGACCCAATGAAATCGAACCTC...CTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR TCA 90 bp ATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAACTTTGTAGTGCATACCTGGCTGGAAACCTaGATCTCGATAACCACCATC +
Preference number: 2 (lower is better)
Translates to: IIKGLLHLAKICLNFVVHTWLET*ISITTI
Trigger: GATGGTGGTTATCGAGATTCAGGTTTCCAGCCAGGT...ATGCACTACAAAGTTAAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR GCA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTAAAGCAGGAATCTGCCTaGCACCTGTGGTCTCACATT +
Preference number: 2 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVKQESA*HLWSHI
Trigger: AATGTGAGACCACAGGTGGCAGGCAGATTCCTGCTT...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CCA 90 bp TTGTTTTCTGCAGCAATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTATCATGAAGCACACGTaGCATAAAAGTCAACCGGGG +
Preference number: 2 (lower is better)
Translates to: LFSAAIIKGLLHLAKICLIMKHT*HKSQPG
Trigger: CCCCGGTTGACTTTTATGCCACGTGTGCTTCATGAT...AAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTATTGCTGCAGAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CCA 90 bp GTTTTCAGAGTTGAGCATATGATACAGTATTCCATCAACAAAATAAGGCTACTGTGGCATCTCTGGGGGTaGAGGTTCGATTTCATTGGG +
Preference number: 2 (lower is better)
Translates to: VFRVEHMIQYSINKIRLLWHLWG*RFDFIG
Trigger: CCCAATGAAATCGAACCTCCACCCCCAGAGATGCCA...CAGTAGCCTTATTTTGTTGATGGAATACTGTATCATATGCTCAACTCTGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR CAA 90 bp TCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTaGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGT +
Preference number: 2 (lower is better)
Translates to: SPFTQSTPPAIFFHS*TMFTCTKTQQEASC
Trigger: ACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR GCA 90 bp GTTTTCAGAGTTGAGCATATGATACAGTATTCCATCAACAAAATAAGGCTACTGAAGCAGGAATCTGCCTaGCACCTGTGGTCTCACATT +
Preference number: 2 (lower is better)
Translates to: VFRVEHMIQYSINKIRLLKQESA*HLWSHI
Trigger: AATGTGAGACCACAGGTGGCAGGCAGATTCCTGCTT...CAGTAGCCTTATTTTGTTGATGGAATACTGTATCATATGCTCAACTCTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR GCA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTATGAAGACCTACAAATaGTTATGCCAAGCAGGAATC +
Preference number: 2 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLMKTYK*LCQAGI
Trigger: GATTCCTGCTTGGCATAAGCATTTGTAGGTCTTCAT...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CCA 90 bp TTGTTTTGGATGGATGCAGGTCAGTTTGAATTGCTATACTTAACTAAATGCCTAATCATGAAGCACACGTaGCATAAAAGTCAACCGGGG +
Preference number: 2 (lower is better)
Translates to: LFWMDAGQFELLYLTKCLIMKHT*HKSQPG
Trigger: CCCCGGTTGACTTTTATGCCACGTGTGCTTCATGAT...TAGGCATTTAGTTAAGTATAGCAATTCAAACTGACCTGCATCCATCCAAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR TCA 90 bp CCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGTCAGAGTTGAGCATATaGTACAGTATTCCATCAACA +
Preference number: 2 (lower is better)
Translates to: PPAIFFHSLTMFTCTKTQSELSI*YSIPST
Trigger: TGTTGATGGAATACTGTATCATATGCTCAACTCTGA...CTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR TCA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCCAAGGTTTTCAGAGTTaGGCATATGATACAGTATTC +
Preference number: 2 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFQGFQS*AYDTVF
Trigger: GAATACTGTATCATATGCTCAACTCTGAAAACCTTG...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR TCA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGCTAACTTGTATTTGCTaGGCCAGTGGTATTAACTCA +
Preference number: 2 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQLTCIC*ASGINS
Trigger: TGAGTTAATACCACTGGCTCAGCAAATACAAGTTAG...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CCA 90 bp CAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAGGAATTTGTTTTGGATaGATGCAGGTCAGTTTGAAT +
Preference number: 2 (lower is better)
Translates to: QSTPPAIFFHSLTMFTCTGICFG*MQVSLN
Trigger: ATTCAAACTGACCTGCATCCATCCAAAACAAATTCC...TGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CCA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAAGGAGGAATTTGTTTTaGATGGATGCAGGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPRRNLF*MDAGQF
Trigger: AAACTGACCTGCATCCATCCAAAACAAATTCCTCCT...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR TCA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGTCAGAGTTGAGCATATaGTACAGTATTCCATCAACA +
Preference number: 2 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQSELSI*YSIPST
Trigger: TGTTGATGGAATACTGTATCATATGCTCAACTCTGA...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR TCA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCACAAGGTTTTCAGAGTTaGGCATATGATACAGTATTC +
Preference number: 2 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPQGFQS*AYDTVF
Trigger: GAATACTGTATCATATGCTCAACTCTGAAAACCTTG...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CCA 90 bp TTGTTTTCTGCAGCAATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAATCTTTATGGATTTTaGCCGTGTTCAAGGTTTTCA +
Preference number: 2 (lower is better)
Translates to: LFSAAIIKGLLHLAKICLNLYGF*PCSRFS
Trigger: TGAAAACCTTGAACACGGCCAAAATCCATAAAGATT...AAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTATTGCTGCAGAAAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CCA 90 bp TTCCATCAACAAAATAAGGCTACTGAATGTGCTATCTGCAAAAGAGCTCATTTAGTGGAATTAGTCTACTaGGCAATTAAAGGCAATTTT +
Preference number: 2 (lower is better)
Translates to: FHQQNKATECAICKRAHLVELVY*AIKGNF
Trigger: AAAATTGCCTTTAATTGCCCAGTAGACTAATTCCAC...TAAATGAGCTCTTTTGCAGATAGCACATTCAGTAGCCTTATTTTGTTGATGGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR CCA 72 bp GGGGCCATCTTGCCTCTTCTGCCACGGTGGCATCTCTaGGGGTGGAGGTTCGATTTCATTGGGTCTACCACC +
Preference number: 3 (lower is better)
Translates to: GAILPLLPRWHL*GWRFDFIGSTT
Trigger: GGTGGTAGACCCAATGAAATCGAACCTCCACCCCCAGAGATGCCACCGTGGCAGAAGAGGCAAGATGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR TCA 72 bp CCCGCCTCCTTGTTCATGACCTCCTCGTCCTCCGTATaGGGAATGTTCATAGCCACCTCTCCCTCCTCCTCG +
Preference number: 3 (lower is better)
Translates to: PASLFMTSSSSV*GMFIATSPSSS
Trigger: CGAGGAGGAGGGAGAGGTGGCTATGAACATTCCTCATACGGAGGACGAGGAGGTCATGAACAAGGAGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR GCA 72 bp GGAAGCCACCATAACCTCCGCCTTGATAGCCACCACTaGTGTGGCCACCATGATAGCCACCTGGCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: GSHHNLRLDSHH*CGHHDSHLAGN
Trigger: GTTTCCAGCCAGGTGGCTATCATGGTGGCCACAGCAGTGGTGGCTATCAAGGCGGAGGTTATGGTGGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR TCA 72 bp GCTGTGGCCACCATGATAGCCACCTGGCTGGAAACCTaGATCTCGATAACCACCATCTTGGTAGCCACCTCC +
Preference number: 3 (lower is better)
Translates to: AVATMIATWLET*ISITTILVATS
Trigger: GGAGGTGGCTACCAAGATGGTGGTTATCGAGATTCAGGTTTCCAGCCAGGTGGCTATCATGGTGGCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR CCA 72 bp ATCTTGCCTCTTCTGCCACGGTGGCATCTCTGGGGGTaGAGGTTCGATTTCATTGGGTCTACCACCTCTGTC +
Preference number: 3 (lower is better)
Translates to: ILPLLPRWHLWG*RFDFIGSTTSV
Trigger: GACAGAGGTGGTAGACCCAATGAAATCGAACCTCCACCCCCAGAGATGCCACCGTGGCAGAAGAGGCAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR CAA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTCTGCTGGGGGCCATCTaGCCTCTTCTGCCACGGTGG +
Preference number: 3 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLLLGAI*PLLPRW
Trigger: CCACCGTGGCAGAAGAGGCAAGATGGCCCCCAGCAG...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR CAA 90 bp TTGTTTTGGATGGATGCAGGTCAGTTTGAATTGCTATACTTAACTAAATGCCTAACCATAACCTCCGCCTaGATAGCCACCACTGCTGTG +
Preference number: 3 (lower is better)
Translates to: LFWMDAGQFELLYLTKCLTITSA*IATTAV
Trigger: CACAGCAGTGGTGGCTATCAAGGCGGAGGTTATGGT...TAGGCATTTAGTTAAGTATAGCAATTCAAACTGACCTGCATCCATCCAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR CAA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACGGAGGTTCGATTTCATaGGGTCTACCACCTCTGTCA +
Preference number: 3 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNGGSIS*GLPPLS
Trigger: TGACAGAGGTGGTAGACCCAATGAAATCGAACCTCC...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR TCA 72 bp CACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTaGCAATGTTTACATGTACAAAAACCCAGCAAGAAG +
Preference number: 3 (lower is better)
Translates to: HKAHLQPFSFTA*QCLHVQKPSKK
Trigger: CTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CAA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCAAGGAGGAATTTGTTTaGGATGGATGCAGGTCAGTT +
Preference number: 3 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFKEEFV*DGCRSV
Trigger: AACTGACCTGCATCCATCCAAAACAAATTCCTCCTT...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CAA 90 bp GTTTTCAGAGTTGAGCATATGATACAGTATTCCATCAACAAAATAAGGCTACTGATCTGTCCAGCCTCCTaGATGCTTATTTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: VFRVEHMIQYSINKIRLLICPAS*MLISSS
Trigger: GGAAGAGGAAATAAGCATCAAGGAGGCTGGACAGAT...CAGTAGCCTTATTTTGTTGATGGAATACTGTATCATATGCTCAACTCTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR-3UTR CAA 90 bp CTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTTAAAGCAAACTAACTaGTATTTGCTGAGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: LSQLDNVYMYKNPARSIMLKQTN*YLLSQW
Trigger: CCACTGGCTCAGCAAATACAAGTTAGTTTGCTTTAA...CATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CAA 90 bp TTAACAGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTAACTCAGCCAGGCTTTaGTTTTCTGCAGCAATAATA +
Preference number: 3 (lower is better)
Translates to: LTDTLLLTFHTKHTSSHFNSARL*FSAAII
Trigger: TATTATTGCTGCAGAAAACAAAAGCCTGGCTGAGTT...AAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238823.13
3UTR-3UTR CAA 90 bp ATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAACTTTGTAGTGCATAACTCAGCCAGGCTTTaGTTTTCTGCAGCAATAATA +
Preference number: 3 (lower is better)
Translates to: IIKGLLHLAKICLNFVVHNSARL*FSAAII
Trigger: TATTATTGCTGCAGAAAACAAAAGCCTGGCTGAGTT...ATGCACTACAAAGTTAAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR-3UTR CAA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTAGCAGGTCAGTTTGAATaGCTATACTTAACTAAATGC +
Preference number: 3 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVAGQFE*LYLTKC
Trigger: GCATTTAGTTAAGTATAGCAATTCAAACTGACCTGC...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR TCA 72 bp GCCACCTGTGGTCTCACATTAATTCAAAATAGGTGCTaGATTCAGGATTCTGAAACTAAGTTTCTATTACTT +
Preference number: 3 (lower is better)
Translates to: ATCGLTLIQNRC*IQDSETKFLLL
Trigger: AAGTAATAGAAACTTAGTTTCAGAATCCTGAATTCAGCACCTATTTTGAATTAATGTGAGACCACAGGTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp TGTTTGCTGCTGGGGGCCATCTTGCCTCTTCTGCCACGGTGGCATCTCTGGGGGCTTGATAGCCACCACTaGTGTGGCCACCATGATAGC +
Preference number: 4 (lower is better)
Translates to: CLLLGAILPLLPRWHLWGLDSHH*CGHHDS
Trigger: GCTATCATGGTGGCCACAGCAGTGGTGGCTATCAAG...CCCCCAGAGATGCCACCGTGGCAGAAGAGGCAAGATGGCCCCCAGCAGCAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403368.1
3UTR CAA 72 bp ACGACCACCACCACGATCACCATGGTGCCCGCCATCTaGGTATCTATTGTCCTGCTGGTAGCCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: TTTTTITMVPAI*VSIVLLVATTL
Trigger: CAGGGTGGTGGCTACCAGCAGGACAATAGATACCAAGATGGCGGGCACCATGGTGATCGTGGTGGTGGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS-3UTR CCA 90 bp ACCACGATCACCATGGTGCCCGCCATCTTGGTATCTATTGTCCTGCTGGTAGCCCCTCCTGTTTGCTGCTaGGGGCCATCTTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TTITMVPAILVSIVLLVAPPVCC*GPSCLF
Trigger: GAAGAGGCAAGATGGCCCCCAGCAGCAAACAGGAGG...GGCTACCAGCAGGACAATAGATACCAAGATGGCGGGCACCATGGTGATCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS-3UTR TCA 90 bp CTTGTTCATGACCTCCTCGTCCTCCGTATGAGGAATGTTCATAGCCACCTCTCCCCGCCTCCTTGTTCATaGCCTCCTCGTCCTCCGTAT +
Preference number: 4 (lower is better)
Translates to: LVHDLLVLRMRNVHSHLSPPPCS*PPRPPY
Trigger: ATACGGAGGACGAGGAGGTCATGAACAAGGAGGCGG...GGAGAGGTGGCTATGAACATTCCTCATACGGAGGACGAGGAGGTCATGAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS-3UTR GCA 90 bp CCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGGCCTCCTCCCTGGCCTaGACGACCACCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPAIFFHSLTMFTCTKTQASSLA*TTTSAS
Trigger: GGAGGCCGAGGTGGTCGTGCAGGCCAGGGAGGAGGC...CTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp ACCACGATCACCATGGTGCCCGCCATCTTGGTATCTATTGTCCTGCTGGTAGCCATCCCCAGATGTCAGTaGAAGATACGGGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: TTITMVPAILVSIVLLVAIPRCQ*KIRAVH
Trigger: ATGAACTGCCCGTATCTTTCACTGACATCTGGGGAT...GGCTACCAGCAGGACAATAGATACCAAGATGGCGGGCACCATGGTGATCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS-3UTR CCA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGCCCCAGCCTCCTCCCTaGCCTGCACGACCACCTCGG +
Preference number: 4 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQPQPPP*PARPPR
Trigger: CCGAGGTGGTCGTGCAGGCCAGGGAGGAGGCTGGGG...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp CTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGCCCCAGCCTCCTCCCTaGCCTGCACGACCACCTCGG +
Preference number: 4 (lower is better)
Translates to: LSQLDNVYMYKNPARSIMPQPPP*PARPPR
Trigger: CCGAGGTGGTCGTGCAGGCCAGGGAGGAGGCTGGGG...CATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTTGCTGGGGGCCATCTTaGCTCTTCTGCCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLCWGPS*LFCHGG
Trigger: GCCACCGTGGCAGAAGAGGCAAGATGGCCCCCAGCA...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp CGACCACCACCACGATCACCATGGTGCCCGCCATCTTGGTATCTATTGTCCTGCGCTAATTTTTCTGTCTaGCTCTTAGCTCTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: RPPPRSPWCPPSWYLLSCANFSV*LLALSD
Trigger: GTCTGACAGAGCTAAGAGCCAGACAGAAAAATTAGC...GCAGGACAATAGATACCAAGATGGCGGGCACCATGGTGATCGTGGTGGTGGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS-3UTR GCA 90 bp AATGAAGACCTACAAATGCTTATGCCAAGCAGGAATCTGCCTGCCACCTGTGGTCCACGATCACCATGGTaGCCGCCATCTTGGTATCTA +
Preference number: 4 (lower is better)
Translates to: NEDLQMLMPSRNLPATCGPRSPW*PPSWYL
Trigger: TAGATACCAAGATGGCGGGCACCATGGTGATCGTGG...ACCACAGGTGGCAGGCAGATTCCTGCTTGGCATAAGCATTTGTAGGTCTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp TTGTTTTGGATGGATGCAGGTCAGTTTGAATTGCTATACTTAACTAAATGCCTAGCCTCCTCCCTGGCCTaGACGACCACCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LFWMDAGQFELLYLTKCLASSLA*TTTSAS
Trigger: GGAGGCCGAGGTGGTCGTGCAGGCCAGGGAGGAGGC...TAGGCATTTAGTTAAGTATAGCAATTCAAACTGACCTGCATCCATCCAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp AATGAAGACCTACAAATGCTTATGCCAAGCAGGAATCTGCCTGCCACCTGTGGTAGATGTCAGTCTCCATaGGGTCACACTCCATGCTAC +
Preference number: 4 (lower is better)
Translates to: NEDLQMLMPSRNLPATCGRCQSP*GHTPCY
Trigger: GTAGCATGGAGTGTGACCTCATGGAGACTGACATCT...ACCACAGGTGGCAGGCAGATTCCTGCTTGGCATAAGCATTTGTAGGTCTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCACGGCCTCCTGTTTGCTaGTGGGGGCCATCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPRPPVC*WGPSCL
Trigger: GAGGCAAGATGGCCCCCAGCAGCAAACAGGAGGCCG...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCACCTCGGCCTCCTGTTTaGTGCTGGGGGCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPPRPPV*CWGPSC
Trigger: GCAAGATGGCCCCCAGCAGCAAACAGGAGGCCGAGG...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp AATGAAGACCTACAAATGCTTATGCCAAGCAGGAATCTGCCTGCCACCTGTGGTTCTATCTTTTCCCAGTaGGCTGGTCCCATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: NEDLQMLMPSRNLPATCGSIFSQ*AGPIGF
Trigger: GAAGCCAATGGGACCAGCCCACTGGGAAAAGATAGA...ACCACAGGTGGCAGGCAGATTCCTGCTTGGCATAAGCATTTGTAGGTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTGTTTTCTGCAGCAATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTCCTCTTCTGCCACGGTaGCATCTCTGGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LFSAAIIKGLLHLAKICLPLLPR*HLWGWR
Trigger: CCTCCACCCCCAGAGATGCCACCGTGGCAGAAGAGG...AAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTATTGCTGCAGAAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp CTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGGGCTCCAGCAGAGACTaGCTGAGAGAGCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LSQLDNVYMYKNPARSIMGSSRD*LRERSI
Trigger: GATGGAGCGCTCTCTCAGGCAGTCTCTGCTGGAGCC...CATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTACGGCCTCCTGTTTGCTaGTGGGGGCCATCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVRPPVC*WGPSCL
Trigger: GAGGCAAGATGGCCCCCAGCAGCAAACAGGAGGCCG...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp ATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAACTTTGTAGTGCATCCTCGGCCTCCTGTTTaGTGCTGGGGGCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: IIKGLLHLAKICLNFVVHPRPPV*CWGPSC
Trigger: GCAAGATGGCCCCCAGCAGCAAACAGGAGGCCGAGG...ATGCACTACAAAGTTAAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp ATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAACTTTGTAGTGCATCCTCTTCTGCCACGGTaGCATCTCTGGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IIKGLLHLAKICLNFVVHPLLPR*HLWGWR
Trigger: CCTCCACCCCCAGAGATGCCACCGTGGCAGAAGAGG...ATGCACTACAAAGTTAAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp GTTTTCAGAGTTGAGCATATGATACAGTATTCCATCAACAAAATAAGGCTACTGTGCTGGGGGCCATCTTaGCTCTTCTGCCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFRVEHMIQYSINKIRLLCWGPS*LFCHGG
Trigger: GCCACCGTGGCAGAAGAGGCAAGATGGCCCCCAGCA...CAGTAGCCTTATTTTGTTGATGGAATACTGTATCATATGCTCAACTCTGAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTTGGCATCTCTGGGGGTaGAGGTTCGATTTCATTGGG +
Preference number: 4 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLWHLWG*RFDFIG
Trigger: CCCAATGAAATCGAACCTCCACCCCCAGAGATGCCA...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGCCACGGTGGCATCTCTaGGGGTGGAGGTTCGATTTC +
Preference number: 4 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQPRWHL*GWRFDF
Trigger: GAAATCGAACCTCCACCCCCAGAGATGCCACCGTGG...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp GTTTTCAGAGTTGAGCATATGATACAGTATTCCATCAACAAAATAAGGCTACTGGGCTCCAGCAGAGACTaGCTGAGAGAGCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: VFRVEHMIQYSINKIRLLGSSRD*LRERSI
Trigger: GATGGAGCGCTCTCTCAGGCAGTCTCTGCTGGAGCC...CAGTAGCCTTATTTTGTTGATGGAATACTGTATCATATGCTCAACTCTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTACCATCTTGCCTCTTCTaGCACGGTGGCATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVPSCLF*HGGISG
Trigger: CCCAGAGATGCCACCGTGGCAGAAGAGGCAAGATGG...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACCCATCTTGCCTCTTCTaGCACGGTGGCATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNPSCLF*HGGISG
Trigger: CCCAGAGATGCCACCGTGGCAGAAGAGGCAAGATGG...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGTGCCAAGCAGGAATCTaGCTGCCACCTGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQCQAGI*LPPVVS
Trigger: TGAGACCACAGGTGGCAGGCAGATTCCTGCTTGGCA...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCATGCCAAGCAGGAATCTaGCTGCCACCTGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPCQAGI*LPPVVS
Trigger: TGAGACCACAGGTGGCAGGCAGATTCCTGCTTGGCA...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp CAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACACTTTTCCCAGTGGGCTaGTCCCATTGGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QSTPPAIFFHSLTMFTCTLFPVG*SHWLLQ
Trigger: CTGAAGAAGCCAATGGGACCAGCCCACTGGGAAAAG...TGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTTCTATCTTTTCCCAGTaGGCTGGTCCCATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLSIFSQ*AGPIGF
Trigger: GAAGCCAATGGGACCAGCCCACTGGGAAAAGATAGA...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTACCTCCTGTTTGCTGCTaGGGGCCATCTTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVPPVCC*GPSCLF
Trigger: GAAGAGGCAAGATGGCCCCCAGCAGCAAACAGGAGG...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCTGGTGCCCGCCATCTTaGTATCTATTGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFWCPPS*YLLSCW
Trigger: CCAGCAGGACAATAGATACCAAGATGGCGGGCACCA...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
3UTR CAA 72 bp ATACTGATAACCTCCATGCTGGAAATGCTGTTCAAATaGACCCCCTTGGTGATAATTCTGGCTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILITSMLEMLFK*TPLVIILAPSS
Trigger: GGAAGAGGGAGCCAGAATTATCACCAAGGGGGTCAATTTGAACAGCATTTCCAGCATGGAGGTTATCAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS-3UTR TCA 90 bp TTGTTTTCTGCAGCAATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAGGAGGCAGTTCTTCTaGATGAGAAGGCGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LFSAAIIKGLLHLAKICLRRQFF*MRRRLV
Trigger: GACCAAGCGCCTTCTCATTCAGAAGAACTGCCTCCT...AAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTATTGCTGCAGAAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGTCCTCGTCCTCCGTATaGGGAATGTTCATAGCCACC +
Preference number: 4 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQSSSSV*GMFIAT
Trigger: GGTGGCTATGAACATTCCTCATACGGAGGACGAGGA...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TTGTTTTGGATGGATGCAGGTCAGTTTGAATTGCTATACTTAACTAAATGCCTACCGCCTCCTTGTTCATaGCCTCCTCGTCCTCCGTAT +
Preference number: 4 (lower is better)
Translates to: LFWMDAGQFELLYLTKCLPPPCS*PPRPPY
Trigger: ATACGGAGGACGAGGAGGTCATGAACAAGGAGGCGG...TAGGCATTTAGTTAAGTATAGCAATTCAAACTGACCTGCATCCATCCAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp AATGAAGACCTACAAATGCTTATGCCAAGCAGGAATCTGCCTGCCACCTGTGGTGGACTGTTAGTTGCTTaGACGTTTTCCTCTAGTTTA +
Preference number: 4 (lower is better)
Translates to: NEDLQMLMPSRNLPATCGGLLVA*TFSSSL
Trigger: TAAACTAGAGGAAAACGTGCAAGCAACTAACAGTCC...ACCACAGGTGGCAGGCAGATTCCTGCTTGGCATAAGCATTTGTAGGTCTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp TTAACAGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTGATAGCCACCACTaGTGTGGCCACCATGATAGC +
Preference number: 4 (lower is better)
Translates to: LTDTLLLTFHTKHTSSHFLDSHH*CGHHDS
Trigger: GCTATCATGGTGGCCACAGCAGTGGTGGCTATCAAG...AAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238823.13
CDS-3UTR GCA 90 bp TTAACAGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCCACGATCACCATGGTaGCCGCCATCTTGGTATCTA +
Preference number: 4 (lower is better)
Translates to: LTDTLLLTFHTKHTSSHFPRSPW*PPSWYL
Trigger: TAGATACCAAGATGGCGGGCACCATGGTGATCGTGG...AAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238823.13
CDS-3UTR GCA 90 bp AATGAAGACCTACAAATGCTTATGCCAAGCAGGAATCTGCCTGCCACCTGTGGTATGAAGACCTACAAATaGTTATGCCAAGCAGGAATC +
Preference number: 4 (lower is better)
Translates to: NEDLQMLMPSRNLPATCGMKTYK*LCQAGI
Trigger: GATTCCTGCTTGGCATAAGCATTTGTAGGTCTTCAT...ACCACAGGTGGCAGGCAGATTCCTGCTTGGCATAAGCATTTGTAGGTCTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGCTTTTCCCAGTGGGCTaGTCCCATTGGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQLFPVG*SHWLLQ
Trigger: CTGAAGAAGCCAATGGGACCAGCCCACTGGGAAAAG...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTGAGGTTCGATTTCATTaGGTCTACCACCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLEVRFH*VYHLCQ
Trigger: CTGACAGAGGTGGTAGACCCAATGAAATCGAACCTC...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp CTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTGGCATCTCTGGGGGTaGAGGTTCGATTTCATTGGG +
Preference number: 4 (lower is better)
Translates to: LSQLDNVYMYKNPARSIMWHLWG*RFDFIG
Trigger: CCCAATGAAATCGAACCTCCACCCCCAGAGATGCCA...CATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTGTTTTGGATGGATGCAGGTCAGTTTGAATTGCTATACTTAACTAAATGCCTACCACGGTGGCATCTCTaGGGGTGGAGGTTCGATTTC +
Preference number: 4 (lower is better)
Translates to: LFWMDAGQFELLYLTKCLPRWHL*GWRFDF
Trigger: GAAATCGAACCTCCACCCCCAGAGATGCCACCGTGG...TAGGCATTTAGTTAAGTATAGCAATTCAAACTGACCTGCATCCATCCAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp CTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTGGTGCCCGCCATCTTaGTATCTATTGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSQLDNVYMYKNPARSIMWCPPS*YLLSCW
Trigger: CCAGCAGGACAATAGATACCAAGATGGCGGGCACCA...CATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTACCACCACGATCACCATaGTGCCCGCCATCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVPPRSP*CPPSWY
Trigger: ATACCAAGATGGCGGGCACCATGGTGATCGTGGTGG...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp CTTGTTCATGACCTCCTCGTCCTCCGTATGAGGAATGTTCATAGCCACCTCTCCGTGGAATTAGTCTACTaGGCAATTAAAGGCAATTTT +
Preference number: 4 (lower is better)
Translates to: LVHDLLVLRMRNVHSHLSVELVY*AIKGNF
Trigger: AAAATTGCCTTTAATTGCCCAGTAGACTAATTCCAC...GGAGAGGTGGCTATGAACATTCCTCATACGGAGGACGAGGAGGTCATGAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS-3UTR TCA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAAGATGTCAGTCTCCATaGGGTCACACTCCATGCTAC +
Preference number: 4 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPRCQSP*GHTPCY
Trigger: GTAGCATGGAGTGTGACCTCATGGAGACTGACATCT...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp CCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGTCTGTCCAGCCTCCTTaGTGCTTATTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPAIFFHSLTMFTCTKTQSVQPP*CLFPLP
Trigger: AGGAAGAGGAAATAAGCATCAAGGAGGCTGGACAGA...CTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TTGTTTTCTGCAGCAATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTACCTGGCTGGAAACCTaGATCTCGATAACCACCATC +
Preference number: 4 (lower is better)
Translates to: LFSAAIIKGLLHLAKICLTWLET*ISITTI
Trigger: GATGGTGGTTATCGAGATTCAGGTTTCCAGCCAGGT...AAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTATTGCTGCAGAAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGAAGCAGGAATCTGCCTaGCACCTGTGGTCTCACATT +
Preference number: 4 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQKQESA*HLWSHI
Trigger: AATGTGAGACCACAGGTGGCAGGCAGATTCCTGCTT...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp CAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAATCATGAAGCACACGTaGCATAAAAGTCAACCGGGG +
Preference number: 4 (lower is better)
Translates to: QSTPPAIFFHSLTMFTCTIMKHT*HKSQPG
Trigger: CCCCGGTTGACTTTTATGCCACGTGTGCTTCATGAT...TGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TTCCATCAACAAAATAAGGCTACTGAATGTGCTATCTGCAAAAGAGCTCATTTAAGGAGGCAGTTCTTCTaGATGAGAAGGCGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FHQQNKATECAICKRAHLRRQFF*MRRRLV
Trigger: GACCAAGCGCCTTCTCATTCAGAAGAACTGCCTCCT...TAAATGAGCTCTTTTGCAGATAGCACATTCAGTAGCCTTATTTTGTTGATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TTGTTTTCTGCAGCAATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTATGCCTTTCAACTCTTaGAAGACCTCACTACCGCCT +
Preference number: 4 (lower is better)
Translates to: LFSAAIIKGLLHLAKICLMPFNS*KTSLPP
Trigger: AGGCGGTAGTGAGGTCTTTCAAGAGTTGAAAGGCAT...AAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTATTGCTGCAGAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp CCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGCCATCAACACCTTATTaGTGGCACAGGCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PPAIFFHSLTMFTCTKTQPSTPY*WHRQSF
Trigger: AAAAGACTGCCTGTGCCATCAATAAGGTGTTGATGG...CTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238823.13
CDS-3UTR CCA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGCCACTCACCTCAAGCTaGAATTCTTCAGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQPLTSS*NSSASL
Trigger: GAGTGAAGCTGAAGAATTCCAGCTTGAGGTGAGTGG...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCTCGGCTGGTAAACCTTaGCTAATTTTTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFSAGKP*LIFLSG
Trigger: GCCAGACAGAAAAATTAGCCAAGGTTTACCAGCCGA...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGAGGTTCGATTTCATTaGGTCTACCACCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPEVRFH*VYHLCQ
Trigger: CTGACAGAGGTGGTAGACCCAATGAAATCGAACCTC...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TTCCATCAACAAAATAAGGCTACTGAATGTGCTATCTGCAAAAGAGCTCATTTAGGCAGTTCTTCTGAATaGGAAGGCGCTTGGTCACAT +
Preference number: 4 (lower is better)
Translates to: FHQQNKATECAICKRAHLGSSSE*EGAWSH
Trigger: ATGTGACCAAGCGCCTTCTCATTCAGAAGAACTGCC...TAAATGAGCTCTTTTGCAGATAGCACATTCAGTAGCCTTATTTTGTTGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACATGCCTTTCAACTCTTaGAAGACCTCACTACCGCCT +
Preference number: 4 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNMPFNS*KTSLPP
Trigger: AGGCGGTAGTGAGGTCTTTCAAGAGTTGAAAGGCAT...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTGGACTGTTAGTTGCTTaGACGTTTTCCTCTAGTTTA +
Preference number: 4 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLGLLVA*TFSSSL
Trigger: TAAACTAGAGGAAAACGTGCAAGCAACTAACAGTCC...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACCCACTCACCTCAAGCTaGAATTCTTCAGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNPLTSS*NSSASL
Trigger: GAGTGAAGCTGAAGAATTCCAGCTTGAGGTGAGTGG...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTAGGAGGAATTTGTTTTaGATGGATGCAGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLRRNLF*MDAGQF
Trigger: AAACTGACCTGCATCCATCCAAAACAAATTCCTCCT...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TTCCATCAACAAAATAAGGCTACTGAATGTGCTATCTGCAAAAGAGCTCATTTAATCCCCAGATGTCAGTaGAAGATACGGGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: FHQQNKATECAICKRAHLIPRCQ*KIRAVH
Trigger: ATGAACTGCCCGTATCTTTCACTGACATCTGGGGAT...TAAATGAGCTCTTTTGCAGATAGCACATTCAGTAGCCTTATTTTGTTGATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTAATCTTTGACAAGTCCTaGCTTGCAGCCAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVIFDKS*LAAKRW
Trigger: CCATCTTTTGGCTGCAAGGCAGGACTTGTCAAAGAT...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTAACAGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCACTCCATGCTACTGTaGTATTCAAATTTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: LTDTLLLTFHTKHTSSHFHSMLL*YSNFRV
Trigger: GACTCGGAAATTTGAATACCACAGTAGCATGGAGTG...AAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238823.13
CDS-3UTR CCA 90 bp ATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAACTTTGTAGTGCATTCACACAGAGCATTCTaGCAGCTTCTAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: IIKGLLHLAKICLNFVVHSHRAF*QLLVLR
Trigger: TCTCAGAACTAGAAGCTGCCAGAATGCTCTGTGTGA...ATGCACTACAAAGTTAAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp GTTTTCAGAGTTGAGCATATGATACAGTATTCCATCAACAAAATAAGGCTACTGATCATGAAGCACACGTaGCATAAAAGTCAACCGGGG +
Preference number: 4 (lower is better)
Translates to: VFRVEHMIQYSINKIRLLIMKHT*HKSQPG
Trigger: CCCCGGTTGACTTTTATGCCACGTGTGCTTCATGAT...CAGTAGCCTTATTTTGTTGATGGAATACTGTATCATATGCTCAACTCTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCAGGAGGAATTTGTTTTaGATGGATGCAGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFRRNLF*MDAGQF
Trigger: AAACTGACCTGCATCCATCCAAAACAAATTCCTCCT...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACAAAGGCTTTCCCACATaGTTAGGTGGAACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNKGFPT*LGGTFA
Trigger: AGCAAAAGTTCCACCTAATCATGTGGGAAAGCCTTT...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCACTAACTTGTATTTGCTaGGCCAGTGGTATTAACTCA +
Preference number: 4 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPLTCIC*ASGINS
Trigger: TGAGTTAATACCACTGGCTCAGCAAATACAAGTTAG...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTACACTCCATGCTACTGTaGTATTCAAATTTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVHSMLL*YSNFRV
Trigger: GACTCGGAAATTTGAATACCACAGTAGCATGGAGTG...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTATATTGGCTGGAGGTTTaGACATTCCTAGAGCAATAC +
Preference number: 4 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVYWLEV*TFLEQY
Trigger: GTATTGCTCTAGGAATGTCCAAACCTCCAGCCAATA...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACTATTGGCTGGAGGTTTaGACATTCCTAGAGCAATAC +
Preference number: 4 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNYWLEV*TFLEQY
Trigger: GTATTGCTCTAGGAATGTCCAAACCTCCAGCCAATA...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp CCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGATCCCGCTGAAGAATTaGAACATAGTTATATTGGCT +
Preference number: 4 (lower is better)
Translates to: PPAIFFHSLTMFTCTKTQIPLKN*NIVILA
Trigger: AGCCAATATAACTATGTTCCAATTCTTCAGCGGGAT...CTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTTCATTGGCTATGGCTTaGTTAATTGCTTCTATCTTT +
Preference number: 4 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLSLAMA*LIASIF
Trigger: AAAGATAGAAGCAATTAACCAAGCCATAGCCAATGA...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp ATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAACTTTGTAGTGCATGCTAATTTTTCTGTCTaGCTCTTAGCTCTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: IIKGLLHLAKICLNFVVHANFSV*LLALSD
Trigger: GTCTGACAGAGCTAAGAGCCAGACAGAAAAATTAGC...ATGCACTACAAAGTTAAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTGTTTTGGATGGATGCAGGTCAGTTTGAATTGCTATACTTAACTAAATGCCTATCGGCTGGTAAACCTTaGCTAATTTTTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LFWMDAGQFELLYLTKCLSAGKP*LIFLSG
Trigger: GCCAGACAGAAAAATTAGCCAAGGTTTACCAGCCGA...TAGGCATTTAGTTAAGTATAGCAATTCAAACTGACCTGCATCCATCCAAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp CCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGGGAATTTGTTTTGGATaGATGCAGGTCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: PPAIFFHSLTMFTCTKTQGICFG*MQVSLN
Trigger: ATTCAAACTGACCTGCATCCATCCAAAACAAATTCC...CTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCGGAATTTGTTTTGGATaGATGCAGGTCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFGICFG*MQVSLN
Trigger: ATTCAAACTGACCTGCATCCATCCAAAACAAATTCC...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp GTTTTCAGAGTTGAGCATATGATACAGTATTCCATCAACAAAATAAGGCTACTGAAAGGCTTTCCCACATaGTTAGGTGGAACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: VFRVEHMIQYSINKIRLLKGFPT*LGGTFA
Trigger: AGCAAAAGTTCCACCTAATCATGTGGGAAAGCCTTT...CAGTAGCCTTATTTTGTTGATGGAATACTGTATCATATGCTCAACTCTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCATCAGAGTTGAGCATATaGTACAGTATTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPSELSI*YSIPST
Trigger: TGTTGATGGAATACTGTATCATATGCTCAACTCTGA...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGCAAGGTTTTCAGAGTTaGGCATATGATACAGTATTC +
Preference number: 4 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQQGFQS*AYDTVF
Trigger: GAATACTGTATCATATGCTCAACTCTGAAAACCTTG...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACCTAACTTGTATTTGCTaGGCCAGTGGTATTAACTCA +
Preference number: 4 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNLTCIC*ASGINS
Trigger: TGAGTTAATACCACTGGCTCAGCAAATACAAGTTAG...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR GCA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACATGAAGACCTACAAATaGTTATGCCAAGCAGGAATC +
Preference number: 4 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNMKTYK*LCQAGI
Trigger: GATTCCTGCTTGGCATAAGCATTTGTAGGTCTTCAT...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp CAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACATCATTGGCTATGGCTTaGTTAATTGCTTCTATCTTT +
Preference number: 4 (lower is better)
Translates to: QSTPPAIFFHSLTMFTCTSLAMA*LIASIF
Trigger: AAAGATAGAAGCAATTAACCAAGCCATAGCCAATGA...TGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR TCA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACTCAGAGTTGAGCATATaGTACAGTATTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNSELSI*YSIPST
Trigger: TGTTGATGGAATACTGTATCATATGCTCAACTCTGA...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTAACAGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTGTGGAATTAGTCTACTaGGCAATTAAAGGCAATTTT +
Preference number: 4 (lower is better)
Translates to: LTDTLLLTFHTKHTSSHFVELVY*AIKGNF
Trigger: AAAATTGCCTTTAATTGCCCAGTAGACTAATTCCAC...AAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCTGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238823.13
CDS-3UTR TCA 90 bp TTGTTTTGGATGGATGCAGGTCAGTTTGAATTGCTATACTTAACTAAATGCCTACAAGGTTTTCAGAGTTaGGCATATGATACAGTATTC +
Preference number: 4 (lower is better)
Translates to: LFWMDAGQFELLYLTKCLQGFQS*AYDTVF
Trigger: GAATACTGTATCATATGCTCAACTCTGAAAACCTTG...TAGGCATTTAGTTAAGTATAGCAATTCAAACTGACCTGCATCCATCCAAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACAATCTTTATGGATTTTaGCCGTGTTCAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNNLYGF*PCSRFS
Trigger: TGAAAACCTTGAACACGGCCAAAATCCATAAAGATT...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CCA 90 bp TTCCATCAACAAAATAAGGCTACTGAATGTGCTATCTGCAAAAGAGCTCATTTAAATCTTTATGGATTTTaGCCGTGTTCAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: FHQQNKATECAICKRAHLNLYGF*PCSRFS
Trigger: TGAAAACCTTGAACACGGCCAAAATCCATAAAGATT...TAAATGAGCTCTTTTGCAGATAGCACATTCAGTAGCCTTATTTTGTTGATGGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS CCA 90 bp ACACTCGCGCATGCGCGACTTCCCCGGAACTTCCAAATCCACAGCTaGCGCCTCAGCTCCCGCACTGCGCATGTCCGGAGCGTGCGCAAG +
Preference number: 5 (lower is better)
Translates to: TLAHARLPRNFQIHS*RLSSRTAHVRSVRK
Trigger: CTTGCGCACGCTCCGGACATGCGCAGTGCGGGAGCTGAGGCGCCAGCTGTGGATTTGGAAGTTCCGGGGAAGTCGCGCATGCGCGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464415.1
CDS GCA 90 bp AGTCGTCAGGCTCCCCTCTTCGCCGGCAACGCGTACACTCGCGCATaGGCGACTTCCCCGGAACTTCCAAATCCACAGCTGGCGCCTCAG +
Preference number: 5 (lower is better)
Translates to: SRQAPLFAGNAYTRA*ATSPELPNPQLAPQ
Trigger: CTGAGGCGCCAGCTGTGGATTTGGAAGTTCCGGGGAAGTCGCGCATGCGCGAGTGTACGCGTTGCCGGCGAAGAGGGGAGCCTGACGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464415.1
CDS GCA 90 bp AGCACAGAGTTTGGTAAACTCGGGGGAACTGGCTCCAGCAGAGACTaGCTGAGAGAGCGCTCCATCTTCCAACAATGGGCCCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: STEFGKLGGTGSSRD*LRERSIFQQWALVT
Trigger: GGTTACAAGGGCCCATTGTTGGAAGATGGAGCGCTCTCTCAGGCAGTCTCTGCTGGAGCCAGTTCCCCCGAGTTTACCAAACTCTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238823.13
ENST00000403368.1
ENST00000431950.1
ENST00000464415.1
ENST00000498340.5
CDS-3UTR CAA 90 bp ACCACGATCACCATGGTGCCCGCCATCTTGGTATCTATTGTCCTGCTGGTAGCCTCGATAACCACCATCTaGGTAGCCACCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: TTITMVPAILVSIVLLVASITTI*VATSST
Trigger: GGTGGAGGAGGTGGCTACCAAGATGGTGGTTATCGA...GGCTACCAGCAGGACAATAGATACCAAGATGGCGGGCACCATGGTGATCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS-3UTR CAA 90 bp CGACCACCACCACGATCACCATGGTGCCCGCCATCTTGGTATCTATTGTCCTGCGGAGGTTCGATTTCATaGGGTCTACCACCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: RPPPRSPWCPPSWYLLSCGGSIS*GLPPLS
Trigger: TGACAGAGGTGGTAGACCCAATGAAATCGAACCTCC...GCAGGACAATAGATACCAAGATGGCGGGCACCATGGTGATCGTGGTGGTGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS CCA 90 bp AGATACGGGCAGTTCATCTCCCCTAGTAGCCCACTCACCTCAAGCTaGAATTCTTCAGCTTCACTCGGACTGTTAGTTGCTTGCACGTTT +
Preference number: 5 (lower is better)
Translates to: RYGQFISPSSPLTSS*NSSASLGLLVACTF
Trigger: AAACGTGCAAGCAACTAACAGTCCGAGTGAAGCTGAAGAATTCCAGCTTGAGGTGAGTGGGCTACTAGGGGAGATGAACTGCCCGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238823.13
ENST00000403368.1
ENST00000464415.1
ENST00000498340.5
CDS-3UTR CAA 90 bp CGACCACCACCACGATCACCATGGTGCCCGCCATCTTGGTATCTATTGTCCTGCTTAAAGCAAACTAACTaGTATTTGCTGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RPPPRSPWCPPSWYLLSCLKQTN*YLLSQW
Trigger: CCACTGGCTCAGCAAATACAAGTTAGTTTGCTTTAA...GCAGGACAATAGATACCAAGATGGCGGGCACCATGGTGATCGTGGTGGTGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS-3UTR CAA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTACTGCTGGGGGCCATCTaGCCTCTTCTGCCACGGTGG +
Preference number: 5 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVLLGAI*PLLPRW
Trigger: CCACCGTGGCAGAAGAGGCAAGATGGCCCCCAGCAG...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS TCA 90 bp TCTAGTTCTGAGATGAGGTATGTGAGCAAGAGGAGGCAGTTCTTCTaGATGAGAAGGCGCTTGGTCACATCCCCAGATGTCAGTGAAAGA +
Preference number: 5 (lower is better)
Translates to: SSSEMRYVSKRRQFF*MRRRLVTSPDVSER
Trigger: TCTTTCACTGACATCTGGGGATGTGACCAAGCGCCTTCTCATTCAGAAGAACTGCCTCCTCTTGCTCACATACCTCATCTCAGAACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp GTTTTCAGAGTTGAGCATATGATACAGTATTCCATCAACAAAATAAGGCTACTGCTGCTGGGGGCCATCTaGCCTCTTCTGCCACGGTGG +
Preference number: 5 (lower is better)
Translates to: VFRVEHMIQYSINKIRLLLLGAI*PLLPRW
Trigger: CCACCGTGGCAGAAGAGGCAAGATGGCCCCCAGCAG...CAGTAGCCTTATTTTGTTGATGGAATACTGTATCATATGCTCAACTCTGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp CTTGTTCATGACCTCCTCGTCCTCCGTATGAGGAATGTTCATAGCCACCTCTCCACTCTAATCACCTTATaGATGGCACAGGCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: LVHDLLVLRMRNVHSHLSTLITL*MAQAVF
Trigger: AAAGACTGCCTGTGCCATCAATAAGGTGATTAGAGT...GGAGAGGTGGCTATGAACATTCCTCATACGGAGGACGAGGAGGTCATGAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS TCA 90 bp CCTTGTAACCTAGATCTTCCAACGACTCCAAGATGTCAGTCTCCATaGGGTCACACTCCATGCTACTGTGGTATTCAAATTTCCGAGTCG +
Preference number: 5 (lower is better)
Translates to: PCNLDLPTTPRCQSP*GHTPCYCGIQISES
Trigger: CGACTCGGAAATTTGAATACCACAGTAGCATGGAGTGTGACCTCATGGAGACTGACATCTTGGAGTCGTTGGAAGATCTAGGTTACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238823.13
ENST00000403368.1
ENST00000431950.1
ENST00000464415.1
ENST00000498340.5
CDS-3UTR CAA 90 bp CTTGTTCATGACCTCCTCGTCCTCCGTATGAGGAATGTTCATAGCCACCTCTCCTGGAACATAGTTATATaGGCTGGAGGTTTGGACATT +
Preference number: 5 (lower is better)
Translates to: LVHDLLVLRMRNVHSHLSWNIVI*AGGLDI
Trigger: AATGTCCAAACCTCCAGCCAATATAACTATGTTCCA...GGAGAGGTGGCTATGAACATTCCTCATACGGAGGACGAGGAGGTCATGAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS-3UTR CAA 90 bp CCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGACCATAACCTCCGCCTaGATAGCCACCACTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PPAIFFHSLTMFTCTKTQTITSA*IATTAV
Trigger: CACAGCAGTGGTGGCTATCAAGGCGGAGGTTATGGT...CTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp CTTGTTCATGACCTCCTCGTCCTCCGTATGAGGAATGTTCATAGCCACCTCTCCGAAATGCTGTTCAAATaGACCCCCTTGGTGATAATT +
Preference number: 5 (lower is better)
Translates to: LVHDLLVLRMRNVHSHLSEMLFK*TPLVII
Trigger: AATTATCACCAAGGGGGTCAATTTGAACAGCATTTC...GGAGAGGTGGCTATGAACATTCCTCATACGGAGGACGAGGAGGTCATGAACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403368.1
CDS CCA 90 bp GTTCCCTTTGTGTCAGTATCATCCCCTTGTGTGCTGATTTCAGCCTaGTATAATGGGGGCTGCAATCTGTTTCAGGTAATTCAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: VPFVSVSSPCVLISA*YNGGCNLFQVIQLK
Trigger: CTTCAACTGAATTACCTGAAACAGATTGCAGCCCCCATTATACCAGGCTGAAATCAGCACACAAGGGGATGATACTGACACAAAGGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474985.5
CDS-3UTR CAA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCAGTGGGCTGGTCCCATaGGCTTCTTCAGTAAAGGCT +
Preference number: 5 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFSGLVP*ASSVKA
Trigger: AGCCTTTACTGAAGAAGCCAATGGGACCAGCCCACT...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGTCGATAACCACCATCTaGGTAGCCACCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQSITTI*VATSST
Trigger: GGTGGAGGAGGTGGCTACCAAGATGGTGGTTATCGA...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGACCATAACCTCCGCCTaGATAGCCACCACTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQTITSA*IATTAV
Trigger: CACAGCAGTGGTGGCTATCAAGGCGGAGGTTATGGT...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS TCA 90 bp CTTTTGCTAATGTTTCCTTTAATGAGCAAGAGGAGGCAGTTCTTCTaGATGAGAAGGCGCTTGGTCACATCCCCAGATGTCAGTGAAAGA +
Preference number: 5 (lower is better)
Translates to: LLLMFPLMSKRRQFF*MRRRLVTSPDVSER
Trigger: TCTTTCACTGACATCTGGGGATGTGACCAAGCGCCTTCTCATTCAGAAGAACTGCCTCCTCTTGCTCATTAAAGGAAACATTAGCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498340.5
CDS CCA 90 bp TTTATTAGCAGCTTTCTCCGGACTTCATATTCATTGGCTATGGCTTaGTTAATTGCTTCTATCTTTTCCCAGTGGGCTGGTCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: FISSFLRTSYSLAMA*LIASIFSQWAGPIG
Trigger: GCCAATGGGACCAGCCCACTGGGAAAAGATAGAAGCAATTAACCAAGCCATAGCCAATGAATATGAAGTCCGGAGAAAGCTGCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238823.13
ENST00000403368.1
ENST00000492649.1
CDS-3UTR CAA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTTATGCCTTTCAACTCTaGAAAGACCTCACTACCGCC +
Preference number: 5 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLYAFQL*KDLTTA
Trigger: GGCGGTAGTGAGGTCTTTCAAGAGTTGAAAGGCATA...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAAGTGGGCTGGTCCCATaGGCTTCTTCAGTAAAGGCT +
Preference number: 5 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPSGLVP*ASSVKA
Trigger: AGCCTTTACTGAAGAAGCCAATGGGACCAGCCCACT...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp CCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGGGAGGTTCGATTTCATaGGGTCTACCACCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: PPAIFFHSLTMFTCTKTQGGSIS*GLPPLS
Trigger: TGACAGAGGTGGTAGACCCAATGAAATCGAACCTCC...CTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGATGGTGCCCGCCATCTaGGTATCTATTGTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQMVPAI*VSIVLL
Trigger: CAGCAGGACAATAGATACCAAGATGGCGGGCACCAT...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCACAGCTTTTCAAATTGACCCCCTaGGTGATAATTCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LLLTFHTKHTSSHFLSQLFKLTP*VIILAP
Trigger: GGGAGCCAGAATTATCACCAAGGGGGTCAATTTGAA...AAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTAAGCCAAGCACAGAGTTaGGTAAACTCGGGGGAACTG +
Preference number: 5 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVSQAQS*VNSGEL
Trigger: CAGTTCCCCCGAGTTTACCAAACTCTGTGCTTGGCT...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCTATGCCTTTCAACTCTaGAAAGACCTCACTACCGCC +
Preference number: 5 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFYAFQL*KDLTTA
Trigger: GGCGGTAGTGAGGTCTTTCAAGAGTTGAAAGGCATA...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCAGACCAGCCAAAGGATaGTACAGTGACATCCAAACG +
Preference number: 5 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFRPAKG*YSDIQT
Trigger: CGTTTGGATGTCACTGTACAATCCTTTGGCTGGTCT...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGTTGACAAGTCCTGCCTaGCAGCCAAAAGATGGGCAA +
Preference number: 5 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQLTSPA*QPKDGQ
Trigger: TTGCCCATCTTTTGGCTGCAAGGCAGGACTTGTCAA...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACATGGTGCCCGCCATCTaGGTATCTATTGTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNMVPAI*VSIVLL
Trigger: CAGCAGGACAATAGATACCAAGATGGCGGGCACCAT...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TTGTTTTGGATGGATGCAGGTCAGTTTGAATTGCTATACTTAACTAAATGCCTAAGCCAAGCACAGAGTTaGGTAAACTCGGGGGAACTG +
Preference number: 5 (lower is better)
Translates to: LFWMDAGQFELLYLTKCLSQAQS*VNSGEL
Trigger: CAGTTCCCCCGAGTTTACCAAACTCTGTGCTTGGCT...TAGGCATTTAGTTAAGTATAGCAATTCAAACTGACCTGCATCCATCCAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp CTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGAGACCAGCCAAAGGATaGTACAGTGACATCCAAACG +
Preference number: 5 (lower is better)
Translates to: LSQLDNVYMYKNPARSIMRPAKG*YSDIQT
Trigger: CGTTTGGATGTCACTGTACAATCCTTTGGCTGGTCT...CATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TCTTTATGGATTTTGGCCGTGTTCAAGGTTTTCAGAGTTGAGCATATGATACAGCCCATCAACACCTTATaGATGGCACAGGCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: SLWILAVFKVFRVEHMIQPINTL*MAQAVF
Trigger: AAAGACTGCCTGTGCCATCAATAAGGTGTTGATGGG...CTGTATCATATGCTCAACTCTGAAAACCTTGAACACGGCCAAAATCCATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238823.13
CDS-3UTR CAA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCATTCAAATTGACCCCCTaGGTGATAATTCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPFKLTP*VIILAP
Trigger: GGGAGCCAGAATTATCACCAAGGGGGTCAATTTGAA...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp GTTTTCAGAGTTGAGCATATGATACAGTATTCCATCAACAAAATAAGGCTACTGTTGACAAGTCCTGCCTaGCAGCCAAAAGATGGGCAA +
Preference number: 5 (lower is better)
Translates to: VFRVEHMIQYSINKIRLLLTSPA*QPKDGQ
Trigger: TTGCCCATCTTTTGGCTGCAAGGCAGGACTTGTCAA...CAGTAGCCTTATTTTGTTGATGGAATACTGTATCATATGCTCAACTCTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TTGCATGTTCTGACTGTGGAATTAGTCTACTGGGCAATTAAAGGCAATTTTAACATCTGTCCAGCCTCCTaGATGCTTATTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LHVLTVELVYWAIKGNFNICPAS*MLISSS
Trigger: GGAAGAGGAAATAAGCATCAAGGAGGCTGGACAGAT...GTTAAAATTGCCTTTAATTGCCCAGTAGACTAATTCCACAGTCAGAACATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TTAACAGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTATATTGGCTGGAGGTTaGGACATTCCTAGAGCAATA +
Preference number: 5 (lower is better)
Translates to: LTDTLLLTFHTKHTSSHFILAGG*DIPRAI
Trigger: TATTGCTCTAGGAATGTCCAAACCTCCAGCCAATAT...AAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238823.13
CDS-3UTR CAA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCTGGAACATAGTTATATaGGCTGGAGGTTTGGACATT +
Preference number: 5 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFWNIVI*AGGLDI
Trigger: AATGTCCAAACCTCCAGCCAATATAACTATGTTCCA...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCAATCCCGCTGAAGAATaGGAACATAGTTATATTGGC +
Preference number: 5 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFNPAEE*EHSYIG
Trigger: GCCAATATAACTATGTTCCAATTCTTCAGCGGGATT...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCAAAGGAGGAATTTGTTTaGGATGGATGCAGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPKEEFV*DGCRSV
Trigger: AACTGACCTGCATCCATCCAAAACAAATTCCTCCTT...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCTTCATTGGCTATGGCTaGGTTAATTGCTTCTATCTT +
Preference number: 5 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFFIGYG*VNCFYL
Trigger: AAGATAGAAGCAATTAACCAAGCCATAGCCAATGAA...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp AGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTCTTTCGCAGGTCAGTTTGAATaGCTATACTTAACTAAATGC +
Preference number: 5 (lower is better)
Translates to: RYFIAHLSHKAHLQPFSFAGQFE*LYLTKC
Trigger: GCATTTAGTTAAGTATAGCAATTCAAACTGACCTGC...GAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TTAACAGATACTTTATTGCTCACCTTTCACACAAAGCACACCTCCAGCCATTTTTTAAAGCAAACTAACTaGTATTTGCTGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: LTDTLLLTFHTKHTSSHFLKQTN*YLLSQW
Trigger: CCACTGGCTCAGCAAATACAAGTTAGTTTGCTTTAA...AAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGCAATAAAGTATCTGTTAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000238823.13
CDS TCA 90 bp TGTAATGCTAGAAGGACAGAGGCCATAATTTTGGCAAATCATTTCTaGAAGGCTGCCAACTCCTGTTCTAAAACAATAAATACAGCTAAG +
Preference number: 5 (lower is better)
Translates to: CNARRTEAIILANHF*KAANSCSKTINTAK
Trigger: CTTAGCTGTATTTATTGTTTTAGAACAGGAGTTGGCAGCCTTTCAGAAATGATTTGCCAAAATTATGGCCTCTGTCCTTCTAGCATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474985.5
CDS-3UTR CAA 90 bp ATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTAACTTTGTAGTGCATAATCCCGCTGAAGAATaGGAACATAGTTATATTGGC +
Preference number: 5 (lower is better)
Translates to: IIKGLLHLAKICLNFVVHNPAEE*EHSYIG
Trigger: GCCAATATAACTATGTTCCAATTCTTCAGCGGGATT...ATGCACTACAAAGTTAAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp ACCTCCAGCCATTTTCTTTCACAGCTTGACAATGTTTACATGTACAAAAACCCATTCATTGGCTATGGCTaGGTTAATTGCTTCTATCTT +
Preference number: 5 (lower is better)
Translates to: TSSHFLSQLDNVYMYKNPFIGYG*VNCFYL
Trigger: AAGATAGAAGCAATTAACCAAGCCATAGCCAATGAA...TGGGTTTTTGTACATGTAAACATTGTCAAGCTGTGAAAGAAAATGGCTGGAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TTGTTTTCTGCAGCAATAATAAAGGGCCTCCTGCACTTAGCAAAAATCTGTCTTGCAGGTCAGTTTGAATaGCTATACTTAACTAAATGC +
Preference number: 5 (lower is better)
Translates to: LFSAAIIKGLLHLAKICLAGQFE*LYLTKC
Trigger: GCATTTAGTTAAGTATAGCAATTCAAACTGACCTGC...AAGACAGATTTTTGCTAAGTGCAGGAGGCCCTTTATTATTGCTGCAGAAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp AGCTTGACAATGTTTACATGTACAAAAACCCAGCAAGAAGCATCATGTCATGTAAACTCAGCCAGGCTTTaGTTTTCTGCAGCAATAATA +
Preference number: 5 (lower is better)
Translates to: SLTMFTCTKTQQEASCHVNSARL*FSAAII
Trigger: TATTATTGCTGCAGAAAACAAAAGCCTGGCTGAGTT...TACATGACATGATGCTTCTTGCTGGGTTTTTGTACATGTAAACATTGTCAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TTGTTTTGGATGGATGCAGGTCAGTTTGAATTGCTATACTTAACTAAATGCCTAGAAATGCTGTTCAAATaGACCCCCTTGGTGATAATT +
Preference number: 5 (lower is better)
Translates to: LFWMDAGQFELLYLTKCLEMLFK*TPLVII
Trigger: AATTATCACCAAGGGGGTCAATTTGAACAGCATTTC...TAGGCATTTAGTTAAGTATAGCAATTCAAACTGACCTGCATCCATCCAAAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS-3UTR CAA 90 bp TTGTTTTGGATGGATGCAGGTCAGTTTGAATTGCTATACTTAACTAAATGCCTAAACTCAGCCAGGCTTTaGTTTTCTGCAGCAATAATA +
Preference number: 5 (lower is better)
Translates to: LFWMDAGQFELLYLTKCLNSARL*FSAAII
Trigger: TATTATTGCTGCAGAAAACAAAAGCCTGGCTGAGTT...TAGGCATTTAGTTAAGTATAGCAATTCAAACTGACCTGCATCCATCCAAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS CCA 72 bp CATGCGCGACTTCCCCGGAACTTCCAAATCCACAGCTaGCGCCTCAGCTCCCGCACTGCGCATGTCCGGAGC +
Preference number: 6 (lower is better)
Translates to: HARLPRNFQIHS*RLSSRTAHVRS
Trigger: GCTCCGGACATGCGCAGTGCGGGAGCTGAGGCGCCAGCTGTGGATTTGGAAGTTCCGGGGAAGTCGCGCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464415.1
CDS GCA 72 bp GCTCCCCTCTTCGCCGGCAACGCGTACACTCGCGCATaGGCGACTTCCCCGGAACTTCCAAATCCACAGCTG +
Preference number: 6 (lower is better)
Translates to: APLFAGNAYTRA*ATSPELPNPQL
Trigger: CAGCTGTGGATTTGGAAGTTCCGGGGAAGTCGCGCATGCGCGAGTGTACGCGTTGCCGGCGAAGAGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464415.1
CDS GCA 72 bp CTTCCAAATCCACAGCTGGCGCCTCAGCTCCCGCACTaGGCATGTCCGGAGCGTGCGCAAGAAACTTGGTCC +
Preference number: 6 (lower is better)
Translates to: LPNPQLAPQLPH*ACPERAQETWS
Trigger: GGACCAAGTTTCTTGCGCACGCTCCGGACATGCGCAGTGCGGGAGCTGAGGCGCCAGCTGTGGATTTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464415.1
CDS TCA 72 bp GAGATGAGGTATGTGAGCAAGAGGAGGCAGTTCTTCTaGATGAGAAGGCGCTTGGTCACATCCCCAGATGTC +
Preference number: 6 (lower is better)
Translates to: EMRYVSKRRQFF*MRRRLVTSPDV
Trigger: GACATCTGGGGATGTGACCAAGCGCCTTCTCATTCAGAAGAACTGCCTCCTCTTGCTCACATACCTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238823.13
ENST00000403368.1
CDS CCA 72 bp CAGTTCATCTCCCCTAGTAGCCCACTCACCTCAAGCTaGAATTCTTCAGCTTCACTCGGACTGTTAGTTGCT +
Preference number: 6 (lower is better)
Translates to: QFISPSSPLTSS*NSSASLGLLVA
Trigger: AGCAACTAACAGTCCGAGTGAAGCTGAAGAATTCCAGCTTGAGGTGAGTGGGCTACTAGGGGAGATGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238823.13
ENST00000403368.1
ENST00000464415.1
ENST00000498340.5
CDS TCA 72 bp TGGTTCCCTTTGTGTCAGTATCATCCCCTTGTGTGCTaGTTTCAGCCTGGTATAATGGGGGCTGCAATCTGT +
Preference number: 6 (lower is better)
Translates to: WFPLCQYHPLVC*FQPGIMGAAIC
Trigger: ACAGATTGCAGCCCCCATTATACCAGGCTGAAATCAGCACACAAGGGGATGATACTGACACAAAGGGAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474985.5
CDS GCA 72 bp CCAGAGCTCCTTTCCCATGGTCTCCAAATCTTATGTTaGCCTCTGGCTAATCAAAGAGAGCCCTCTTTCATC +
Preference number: 6 (lower is better)
Translates to: PELLSHGLQILC*PLANQREPSFI
Trigger: GATGAAAGAGGGCTCTCTTTGATTAGCCAGAGGGCAACATAAGATTTGGAGACCATGGGAAAGGAGCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474985.5
CDS TCA 72 bp ATGTTTCCTTTAATGAGCAAGAGGAGGCAGTTCTTCTaGATGAGAAGGCGCTTGGTCACATCCCCAGATGTC +
Preference number: 6 (lower is better)
Translates to: MFPLMSKRRQFF*MRRRLVTSPDV
Trigger: GACATCTGGGGATGTGACCAAGCGCCTTCTCATTCAGAAGAACTGCCTCCTCTTGCTCATTAAAGGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498340.5
CDS CCA 72 bp GTGTCAGTATCATCCCCTTGTGTGCTGATTTCAGCCTaGTATAATGGGGGCTGCAATCTGTTTCAGGTAATT +
Preference number: 6 (lower is better)
Translates to: VSVSSPCVLISA*YNGGCNLFQVI
Trigger: AATTACCTGAAACAGATTGCAGCCCCCATTATACCAGGCTGAAATCAGCACACAAGGGGATGATACTGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474985.5
CDS CCA 72 bp GCAAATGTAAAAGACCCACAAGATAAAGACACTCACTaGTCCCACTCCTCACGCCTACAGAAGTCCTTCATT +
Preference number: 6 (lower is better)
Translates to: ANVKDPQDKDTH*SHSSRLQKSFI
Trigger: AATGAAGGACTTCTGTAGGCGTGAGGAGTGGGACCAGTGAGTGTCTTTATCTTGTGGGTCTTTTACATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492649.1
CDS CAA 72 bp CAGCTTTCTCCGGACTTCATATTCATTGGCTATGGCTaGGTTAATTGCTTCTATCTTTTCCCAGTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: QLSPDFIFIGYG*VNCFYLFPVGW
Trigger: CCAGCCCACTGGGAAAAGATAGAAGCAATTAACCAAGCCATAGCCAATGAATATGAAGTCCGGAGAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238823.13
ENST00000403368.1
ENST00000492649.1
CDS TCA 72 bp CTAGATCTTCCAACGACTCCAAGATGTCAGTCTCCATaGGGTCACACTCCATGCTACTGTGGTATTCAAATT +
Preference number: 6 (lower is better)
Translates to: LDLPTTPRCQSP*GHTPCYCGIQI
Trigger: AATTTGAATACCACAGTAGCATGGAGTGTGACCTCATGGAGACTGACATCTTGGAGTCGTTGGAAGATCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238823.13
ENST00000403368.1
ENST00000431950.1
ENST00000464415.1
ENST00000498340.5
CDS CAA 72 bp TTCTCACTACTTGTGAGCATCAATGACACAACTACCTaGCTCTCTTGTCTCCCATTAATTAGGAGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: FSLLVSINDTTT*LSCLPLIRSLS
Trigger: GGACAGGCTCCTAATTAATGGGAGACAAGAGAGCAAGGTAGTTGTGTCATTGATGCTCACAAGTAGTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474985.5
CDS GCA 72 bp ACTGCCACACTCACTCATTTATATATTGTCTATGGCTaGTTTCATGCTGTAACAGCAAAGGTATGTAGTTGT +
Preference number: 6 (lower is better)
Translates to: TATLTHLYIVYG*FHAVTAKVCSC
Trigger: ACAACTACATACCTTTGCTGTTACAGCATGAAAGCAGCCATAGACAATATATAAATGAGTGAGTGTGGCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474985.5
CDS CAA 72 bp TTTTCAATCCCGCTGAAGAATTGGAACATAGTTATATaGGCTGGAGGTTTGGACATTCCTAGAGCAATACAT +
Preference number: 6 (lower is better)
Translates to: FSIPLKNWNIVI*AGGLDIPRAIH
Trigger: ATGTATTGCTCTAGGAATGTCCAAACCTCCAGCCAATATAACTATGTTCCAATTCTTCAGCGGGATTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238823.13
ENST00000403368.1
ENST00000474985.5
CDS CAA 72 bp CAGCTTTCTCCGGACTTCATATTCATTGGCTATGGCTaGGTTAATTGCTTCTATCTTTTCCTGAAGCAAAAT +
Preference number: 6 (lower is better)
Translates to: QLSPDFIFIGYG*VNCFYLFLKQN
Trigger: ATTTTGCTTCAGGAAAAGATAGAAGCAATTAACCAAGCCATAGCCAATGAATATGAAGTCCGGAGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475122.1
CDS GCA 72 bp ACCACTGTTTTTGTACATAAGGTTTCATTAGGACACTaGCACACTCACTCATTTATATATTGTCTATGGCTG +
Preference number: 6 (lower is better)
Translates to: TTVFVHKVSLGH*HTHSFIYCLWL
Trigger: CAGCCATAGACAATATATAAATGAGTGAGTGTGGCAGTGTCCTAATGAAACCTTATGTACAAAAACAGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474985.5
CDS TCA 72 bp CAGCTAAGTTTCTGGAAAGGTCATTCTAAATGGATTTaGCACTGTAAAATCTTAACATGTTCCATACAGCAA +
Preference number: 6 (lower is better)
Translates to: QLSFWKGHSKWI*HCKILTCSIQQ
Trigger: TTGCTGTATGGAACATGTTAAGATTTTACAGTGTCAAATCCATTTAGAATGACCTTTCCAGAAACTTAGCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474985.5