Pregenerated sensors for FAM95C (Homo sapiens)
Ensembl gene IDs: ENSG00000283486Ensembl transcript IDs: ENST00000625242.1, ENST00000637288.1, ENST00000637322.1, ENST00000637556.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGTAATCATAGCGCTGGGAGGGAGGGCTCTGGACAGTATAGCTTaGTGCTCAGTAGAAGATGATAAGGATGTTCCTGAAGTCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GVIIALGGRALDSIA*CSVEDDKDVPEVRL Trigger: CAGCCTGACTTCAGGAACATCCTTATCATCTTCTACTGAGCAGCAAGCTATACTGTCCAGAGCCCTCCCTCCCAGCGCTATGATTACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| 3UTR CCA 90 bp | TCTGCAGTCAGGTGGTTAGGACATTTCTCACAGCCCGAGTTCCCATaGAATGTTTTACTCCAACCAGGATCTGTGCGTCCTTCATGCTTC | + |
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Preference number: 1 (lower is better) Translates to: SAVRWLGHFSQPEFP*NVLLQPGSVRPSCF Trigger: GAAGCATGAAGGACGCACAGATCCTGGTTGGAGTAAAACATTCCATGGGAACTCGGGCTGTGAGAAATGTCCTAACCACCTGACTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637288.1 |
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| 3UTR CCA 90 bp | GGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTaGTTAGGACATTTCTCACAGCCCGAGTTCCCATGGAATGTTTTA | + |
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Preference number: 1 (lower is better) Translates to: GLCPAGCDKDVSAVR*LGHFSQPEFPWNVL Trigger: TAAAACATTCCATGGGAACTCGGGCTGTGAGAAATGTCCTAACCACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTAGGCTGTTGGGCCTTTaGCCAGCAGGATGTGATAAG | + |
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Preference number: 2 (lower is better) Translates to: GCWAFAQQDVIRMFLQSGRLLGL*PAGCDK Trigger: CTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCT...ACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTTCCAACCAGGATCTGTaGGTCCTTCATGCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GCWAFAQQDVIRMFLQSGSNQDL*VLHASF Trigger: GAAGGAAGCATGAAGGACGCACAGATCCTGGTTGGA...ACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637288.1 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTGTTTCTGCAGTCAGGTaGTTAGGACATTTCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: GCWAFAQQDVIRMFLQSGVSAVR*LGHFSQ Trigger: CTGTGAGAAATGTCCTAACCACCTGACTGCAGAAAC...ACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| 3UTR CAA 90 bp | TGCTGCTCAGTAGAAGATGATAAGGATGTTCCTGAAGTCAGGCTGTaGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: CCSVEDDKDVPEVRL*GLCPAGCDKDVSAV Trigger: GACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCTGACTTCAGGAACATCCTTATCATCTTCTACTGAGCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| 3UTR-3UTR CAA 90 bp | CGCTCACAGGCTGGGGTAATCATAGCGCTGGGAGGGAGGGCTCTGGACAGTATAGCCATATGTGGATGTTaGCTGGGGGCTTCTTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: RSQAGVIIALGGRALDSIAICGC*LGASCC Trigger: ACAGCAAGAAGCCCCCAGCAAACATCCACATATGGC...TATACTGTCCAGAGCCCTCCCTCCCAGCGCTATGATTACCCCAGCCTGTGAGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| 3UTR TCA 72 bp | CCAAACACAGTGACAGGGAGAGACCCCTCCAAGAGGTaGCCTTTGAGCAGCAACCTGAGAGATGTTGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: PNTVTGRDPSKR*PLSSNLRDVGW Trigger: CCACCCAACATCTCTCAGGTTGCTGCTCAAAGGTCACCTCTTGGAGGGGTCTCTCCCTGTCACTGTGTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| 3UTR-3UTR CAA 90 bp | AGGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGGCCATATGTGGATGTTaGCTGGGGGCTTCTTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: RLLGLCPAGCDKDVSAVRAICGC*LGASCC Trigger: ACAGCAAGAAGCCCCCAGCAAACATCCACATATGGC...CCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| 3UTR-3UTR CAA 90 bp | CTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTGGGCCATATGTGGATGTTaGCTGGGGGCTTCTTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: LLGLCPAGCDKDVSAVRWAICGC*LGASCC Trigger: ACAGCAAGAAGCCCCCAGCAAACATCCACATATGGC...CCACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| 3UTR GCA 72 bp | GCGCTGGGAGGGAGGGCTCTGGACAGTATAGCTTGCTaGTCAGTAGAAGATGATAAGGATGTTCCTGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: ALGGRALDSIAC*SVEDDKDVPEV Trigger: GACTTCAGGAACATCCTTATCATCTTCTACTGAGCAGCAAGCTATACTGTCCAGAGCCCTCCCTCCCAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| 3UTR CCA 72 bp | CCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTaGTTAGGACATTTCTCACAGCCCGAGTTCCCATGG | + |
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Preference number: 3 (lower is better) Translates to: PAGCDKDVSAVR*LGHFSQPEFPW Trigger: CCATGGGAACTCGGGCTGTGAGAAATGTCCTAACCACCTGACTGCAGAAACATCCTTATCACATCCTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| 3UTR GCA 72 bp | GATAAGGATGTTCCTGAAGTCAGGCTGTTGGGCCTTTaGCCAGCAGGATGTGATAAGGATGTTTCTGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: DKDVPEVRLLGL*PAGCDKDVSAV Trigger: GACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCTGACTTCAGGAACATCCTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| 3UTR GCA 72 bp | ATAGCGCTGGGAGGGAGGGCTCTGGACAGTATAGCTTaGTGCTCAGTAGAAGATGATAAGGATGTTCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: IALGGRALDSIA*CSVEDDKDVPE Trigger: TTCAGGAACATCCTTATCATCTTCTACTGAGCAGCAAGCTATACTGTCCAGAGCCCTCCCTCCCAGCGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| 3UTR CCA 72 bp | AGGTGGTTAGGACATTTCTCACAGCCCGAGTTCCCATaGAATGTTTTACTCCAACCAGGATCTGTGCGTCCT | + |
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Preference number: 3 (lower is better) Translates to: RWLGHFSQPEFP*NVLLQPGSVRP Trigger: AGGACGCACAGATCCTGGTTGGAGTAAAACATTCCATGGGAACTCGGGCTGTGAGAAATGTCCTAACCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637288.1 |
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| 3UTR CCA 72 bp | AGGTGGTTAGGACATTTCTCACAGCCCGAGTTCCCATaGAATGTTTTACTCCAACCAGGATCTGCAAAACAG | + |
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Preference number: 3 (lower is better) Translates to: RWLGHFSQPEFP*NVLLQPGSAKQ Trigger: CTGTTTTGCAGATCCTGGTTGGAGTAAAACATTCCATGGGAACTCGGGCTGTGAGAAATGTCCTAACCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| 3UTR CCA 72 bp | AGGTGGTTAGGACATTTCTCACAGCCCGAGTTCCCATaGAATGTTTTACTCCAACCAGGATCAAAACACAGG | + |
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Preference number: 3 (lower is better) Translates to: RWLGHFSQPEFP*NVLLQPGSKHR Trigger: CCTGTGTTTTGATCCTGGTTGGAGTAAAACATTCCATGGGAACTCGGGCTGTGAGAAATGTCCTAACCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637322.1 |
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| CDS-3UTR TCA 90 bp | TGCGGAGGGGGAAACCAGCTTAGTGTCAGTGCCCACTGCCGCTCACAGGCTGGGGAGGAACAGGACAGATaGGGCCCCTGCCATCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: CGGGNQLSVSAHCRSQAGEEQDR*GPCHPG Trigger: ACCAGGATGGCAGGGGCCTCATCTGTCCTGTTCCTC...CCCAGCCTGTGAGCGGCAGTGGGCACTGACACTAAGCTGGTTTCCCCCTCCGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | TGCGGAGGGGGAAACCAGCTTAGTGTCAGTGCCCACTGCCGCTCACAGGCTGGGGGAAGGGCTCGCCTGTaGTTCCTTGGTGCAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: CGGGNQLSVSAHCRSQAGGRARL*FLGAVD Trigger: ATCCACTGCACCAAGGAAGCACAGGCGAGCCCTTCC...CCCAGCCTGTGAGCGGCAGTGGGCACTGACACTAAGCTGGTTTCCCCCTCCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | GCGGAGGGGGAAACCAGCTTAGTGTCAGTGCCCACTGCCGCTCACAGGCTGGGGCCCCTGCCATCCTGGTaGTCTTGTCTGATGAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: AEGETSLVSVPTAAHRLGPLPSW*SCLMKE Trigger: TTCCTTCATCAGACAAGAGCACCAGGATGGCAGGGG...CCCCAGCCTGTGAGCGGCAGTGGGCACTGACACTAAGCTGGTTTCCCCCTCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| CDS-3UTR TCA 90 bp | GCGGAGGGGGAAACCAGCTTAGTGTCAGTGCCCACTGCCGCTCACAGGCTGGGGAAAGTAAACTTCCCTTaGGCACCTACACTGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: AEGETSLVSVPTAAHRLGKVNFP*APTLYQ Trigger: CTGGTACAGTGTAGGTGCTCAAGGGAAGTTTACTTT...CCCCAGCCTGTGAGCGGCAGTGGGCACTGACACTAAGCTGGTTTCCCCCTCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | GCGGAGGGGGAAACCAGCTTAGTGTCAGTGCCCACTGCCGCTCACAGGCTGGGGTTCTCCTTTATGGTCTaGAGTGCCTGCATTAGCATC | + |
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Preference number: 4 (lower is better) Translates to: AEGETSLVSVPTAAHRLGFSFMV*SACISI Trigger: GATGCTAATGCAGGCACTGCAGACCATAAAGGAGAA...CCCCAGCCTGTGAGCGGCAGTGGGCACTGACACTAAGCTGGTTTCCCCCTCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR TCA 90 bp | GCGGAGGGGGAAACCAGCTTAGTGTCAGTGCCCACTGCCGCTCACAGGCTGGGGATTACCAGAGTGAGATaGGCTAGAAAGAAACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: AEGETSLVSVPTAAHRLGITRVR*ARKKLR Trigger: CCTCAGTTTCTTTCTAGCTCATCTCACTCTGGTAAT...CCCCAGCCTGTGAGCGGCAGTGGGCACTGACACTAAGCTGGTTTCCCCCTCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| CDS-3UTR TCA 90 bp | GTAATCATAGCGCTGGGAGGGAGGGCTCTGGACAGTATAGCTTGCTGCTCAGTAGACCCCTCCAAGAGGTaGCCTTTGAGCAGCAACCTG | + |
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Preference number: 4 (lower is better) Translates to: VIIALGGRALDSIACCSVDPSKR*PLSSNL Trigger: CAGGTTGCTGCTCAAAGGTCACCTCTTGGAGGGGTC...TACTGAGCAGCAAGCTATACTGTCCAGAGCCCTCCCTCCCAGCGCTATGATTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | AGGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGCGGGCCTGTTTGTCCTaGTCTCAGTGGATGCGACAG | + |
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Preference number: 4 (lower is better) Translates to: RLLGLCPAGCDKDVSAVRRACLS*SQWMRQ Trigger: CTGTCGCATCCACTGAGAGCAGGACAAACAGGCCCG...CCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | TGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTGGTGGAAGGGCTCGCCTGTaGTTCCTTGGTGCAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: CWAFAQQDVIRMFLQSGGGRARL*FLGAVD Trigger: ATCCACTGCACCAAGGAAGCACAGGCGAGCCCTTCC...ACCACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637288.1 ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | TGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTGGTCGGGCCTGTTTGTCCTaGTCTCAGTGGATGCGACAG | + |
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Preference number: 4 (lower is better) Translates to: CWAFAQQDVIRMFLQSGGRACLS*SQWMRQ Trigger: CTGTCGCATCCACTGAGAGCAGGACAAACAGGCCCG...ACCACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR CCA 90 bp | GTAATCATAGCGCTGGGAGGGAGGGCTCTGGACAGTATAGCTTGCTGCTCAGTACTGAGAGATGTTGGGTaGGGGGAGGCATGGAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VIIALGGRALDSIACCSVLRDVG*GEAWKR Trigger: CCTTTTCCATGCCTCCCCCCACCCAACATCTCTCAG...TACTGAGCAGCAAGCTATACTGTCCAGAGCCCTCCCTCCCAGCGCTATGATTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | AGGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGAGGCTGTTGGGCCTTTaGCCAGCAGGATGTGATAAG | + |
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Preference number: 4 (lower is better) Translates to: RLLGLCPAGCDKDVSAVRRLLGL*PAGCDK Trigger: CTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCT...CCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | ACAGGTTTATTACTAGCAAAACCCTGCGGAGGGGGAAACCAGCTTAGTGTCAGTCGGGCCTGTTTGTCCTaGTCTCAGTGGATGCGACAG | + |
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Preference number: 4 (lower is better) Translates to: TGLLLAKPCGGGNQLSVSRACLS*SQWMRQ Trigger: CTGTCGCATCCACTGAGAGCAGGACAAACAGGCCCG...ACTGACACTAAGCTGGTTTCCCCCTCCGCAGGGTTTTGCTAGTAATAAACCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | CTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTGGTCCAACCAGGATCTGTaGGTCCTTCATGCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLGLCPAGCDKDVSAVRWSNQDL*VLHASF Trigger: GAAGGAAGCATGAAGGACGCACAGATCCTGGTTGGA...CCACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637288.1 |
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| CDS-3UTR CCA 90 bp | GGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTTCGCCTGTGCTTCCTTaGTGCAGTGGATTCTACAAA | + |
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Preference number: 4 (lower is better) Translates to: GCWAFAQQDVIRMFLQSGSPVLP*CSGFYK Trigger: TTTGTAGAATCCACTGCACCAAGGAAGCACAGGCGA...ACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637288.1 ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | ACAGGTTTATTACTAGCAAAACCCTGCGGAGGGGGAAACCAGCTTAGTGTCAGTAGGCTGTTGGGCCTTTaGCCAGCAGGATGTGATAAG | + |
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Preference number: 4 (lower is better) Translates to: TGLLLAKPCGGGNQLSVSRLLGL*PAGCDK Trigger: CTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCT...ACTGACACTAAGCTGGTTTCCCCCTCCGCAGGGTTTTGCTAGTAATAAACCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | AGGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTTCTCCTTTATGGTCTaGAGTGCCTGCATTAGCATC | + |
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Preference number: 4 (lower is better) Translates to: RLLGLCPAGCDKDVSAVRFSFMV*SACISI Trigger: GATGCTAATGCAGGCACTGCAGACCATAAAGGAGAA...CCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR GCA 90 bp | TGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTGGTACTCCAACCAGGATCTaGAAAACAGCAAGGGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: CWAFAQQDVIRMFLQSGGTPTRI*KTARGL Trigger: TAAACCCCTTGCTGTTTTGCAGATCCTGGTTGGAGT...ACCACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| CDS-3UTR CCA 90 bp | TGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTGGTGTTTCTGCAGTCAGGTaGTTAGGACATTTCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: CWAFAQQDVIRMFLQSGGVSAVR*LGHFSQ Trigger: CTGTGAGAAATGTCCTAACCACCTGACTGCAGAAAC...ACCACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR TCA 90 bp | GGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTAAGACATTACCAGAGTaGGATGAGCTAGAAAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: GCWAFAQQDVIRMFLQSGKTLPE*DELERN Trigger: GTTTCTTTCTAGCTCATCTCACTCTGGTAATGTCTT...ACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| CDS-3UTR CCA 90 bp | ACAGGTTTATTACTAGCAAAACCCTGCGGAGGGGGAAACCAGCTTAGTGTCAGTTCGCCTGTGCTTCCTTaGTGCAGTGGATTCTACAAA | + |
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Preference number: 4 (lower is better) Translates to: TGLLLAKPCGGGNQLSVSSPVLP*CSGFYK Trigger: TTTGTAGAATCCACTGCACCAAGGAAGCACAGGCGA...ACTGACACTAAGCTGGTTTCCCCCTCCGCAGGGTTTTGCTAGTAATAAACCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637556.1 |
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| 3UTR CAA 72 bp | GTAGAAGATGATAAGGATGTTCCTGAAGTCAGGCTGTaGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTT | + |
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Preference number: 4 (lower is better) Translates to: VEDDKDVPEVRL*GLCPAGCDKDV Trigger: AACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCTGACTTCAGGAACATCCTTATCATCTTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR CAA 90 bp | GCGGAGGGGGAAACCAGCTTAGTGTCAGTGCCCACTGCCGCTCACAGGCTGGGGGAAGATCAGATAAGCTaGCTCGGCACAAGTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: AEGETSLVSVPTAAHRLGEDQIS*LGTSAS Trigger: TGATGCACTTGTGCCGAGCAAGCTTATCTGATCTTC...CCCCAGCCTGTGAGCGGCAGTGGGCACTGACACTAAGCTGGTTTCCCCCTCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR CAA 90 bp | AGGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGCACCACCGGGCCTGTTaGTCCTGCTCTCAGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: RLLGLCPAGCDKDVSAVRHHRAC*SCSQWM Trigger: CATCCACTGAGAGCAGGACAAACAGGCCCGGTGGTG...CCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR CAA 90 bp | GTAATCATAGCGCTGGGAGGGAGGGCTCTGGACAGTATAGCTTGCTGCTCAGTAGCCATATGTGGATGTTaGCTGGGGGCTTCTTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: VIIALGGRALDSIACCSVAICGC*LGASCC Trigger: ACAGCAAGAAGCCCCCAGCAAACATCCACATATGGC...TACTGAGCAGCAAGCTATACTGTCCAGAGCCCTCCCTCCCAGCGCTATGATTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR CAA 90 bp | ACAGGTTTATTACTAGCAAAACCCTGCGGAGGGGGAAACCAGCTTAGTGTCAGTCACCACCGGGCCTGTTaGTCCTGCTCTCAGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: TGLLLAKPCGGGNQLSVSHHRAC*SCSQWM Trigger: CATCCACTGAGAGCAGGACAAACAGGCCCGGTGGTG...ACTGACACTAAGCTGGTTTCCCCCTCCGCAGGGTTTTGCTAGTAATAAACCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR CAA 90 bp | TGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTGGTGCCATATGTGGATGTTaGCTGGGGGCTTCTTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: CWAFAQQDVIRMFLQSGGAICGC*LGASCC Trigger: ACAGCAAGAAGCCCCCAGCAAACATCCACATATGGC...ACCACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| CDS-3UTR CAA 90 bp | GGCTGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTGAAGATCAGATAAGCTaGCTCGGCACAAGTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: GCWAFAQQDVIRMFLQSGEDQIS*LGTSAS Trigger: TGATGCACTTGTGCCGAGCAAGCTTATCTGATCTTC...ACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| CDS CCA 90 bp | TCTGCAGTCAGGTGGTTAGGACATTTCTCACAGCCCGAGTTCCCATaGAATGTTTTACTCCAACCAGGATCTTGCTCGGCACAAGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: SAVRWLGHFSQPEFP*NVLLQPGSCSAQVH Trigger: ATGCACTTGTGCCGAGCAAGATCCTGGTTGGAGTAAAACATTCCATGGGAACTCGGGCTGTGAGAAATGTCCTAACCACCTGACTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625242.1 |
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| CDS-3UTR CAA 90 bp | TGTTGGGCCTTTGCCCAGCAGGATGTGATAAGGATGTTTCTGCAGTCAGGTGGTGAAGATCAGATAAGCTaGCTCGGCACAAGTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: CWAFAQQDVIRMFLQSGGEDQIS*LGTSAS Trigger: TGATGCACTTGTGCCGAGCAAGCTTATCTGATCTTC...ACCACCTGACTGCAGAAACATCCTTATCACATCCTGCTGGGCAAAGGCCCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637288.1 ENST00000637322.1 ENST00000637556.1 |
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| CDS CCA 72 bp | AGGTGGTTAGGACATTTCTCACAGCCCGAGTTCCCATaGAATGTTTTACTCCAACCAGGATCTTGCTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: RWLGHFSQPEFP*NVLLQPGSCSA Trigger: TGCCGAGCAAGATCCTGGTTGGAGTAAAACATTCCATGGGAACTCGGGCTGTGAGAAATGTCCTAACCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625242.1 |
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