Pregenerated sensors for FAM8A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000137414Ensembl transcript IDs: ENST00000259963.4
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGCCTCACTTGTCCCTTTCTCTTGTAGCCAACTCACCACCTCCTaGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCCCT | + |
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Preference number: 1 (lower is better) Translates to: PASLVPFSCSQLTTS*DGRQWIIQFVFSFP Trigger: AGGGAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAAAGGGACAAGTGAGGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| 3UTR CCA 90 bp | CCTTTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTaGATTATCCAATTTGTGTTCTCATTCCCTCCTCTAAACACCAAA | + |
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Preference number: 1 (lower is better) Translates to: PFSCSQLTTSWDGRQ*IIQFVFSFPPLNTK Trigger: TTTGGTGTTTAGAGGAGGGAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| 3UTR TCA 90 bp | CCCCCAAACTTTAGCAGACCCAAAATGAGCTTAAAGACCCTAGAATaGTGTCTGGGAATGCTAGTCTCTCTTGCTTTAGAGAGAATAGTC | + |
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Preference number: 1 (lower is better) Translates to: PPNFSRPKMSLKTLE*CLGMLVSLALERIV Trigger: GACTATTCTCTCTAAAGCAAGAGAGACTAGCATTCCCAGACATCATTCTAGGGTCTTTAAGCTCATTTTGGGTCTGCTAAAGTTTGGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTAGTCTTAGTGTGTaGAAATCAGGGTTTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQFSLSV*KSGFWG Trigger: CCCCCAAAACCCTGATTTCCACACACTAAGACTAAA...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| 3UTR CCA 72 bp | TGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTaGATTATCCAATTTGTGTTCTCATTCCCTCCTCTA | + |
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Preference number: 3 (lower is better) Translates to: CSQLTTSWDGRQ*IIQFVFSFPPL Trigger: TAGAGGAGGGAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR GCA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCCCTCCGCCATCGTCCTaGCCGGGAGGGTGGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFPPPSS*PGGWPR Trigger: CCGAGGCCACCCTCCCGGGCAGGACGATGGCGGAGG...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CCA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAAAGCTGGTCTCTCTCGTaGCGCCGCGGCTTCGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQSWSLS*RRGFGR Trigger: GCGCCCGAAGCCGCGGCGCCACGAGAGAGACCAGCT...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CCA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCGTCGTCGCGGGGGCATaGGACGGCGGTGGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFVVAGA*DGGGRR Trigger: CCTCCTACCACCGCCGTCCCATGCCCCCGCGACGAC...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR GCA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCCTCCAATTTGTCGGCTaGGGCGGCAGCCGCGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFLQFVG*GGSREA Trigger: GGCCTCGCGGCTGCCGCCGCAGCCGACAAATTGGAG...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR GCA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCAGCCACTCGTGCACTTaGCGGGAGTACTCGCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFSHSCT*REYSRA Trigger: CGCCCGCGAGTACTCCCGGCAAGTGCACGAGTGGCT...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR GCA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATGGGATACCTGTCACTaGTCCGTTTCCCTCCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQWDTCH*SVSLPQ Trigger: TTGGGGGAGGGAAACGGAGCAGTGACAGGTATCCCA...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CCA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAACACCACCTCCTGGGATaGGAGACAGTGGATTATCCA | + |
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Preference number: 4 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQHHLLG*ETVDYP Trigger: TGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTG...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CCA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAACAACTCACCACCTCCTaGGATGGGAGACAGTGGATT | + |
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Preference number: 4 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQQLTTS*DGRQWI Trigger: AATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTG...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| 3UTR CAA 72 bp | AAACTTCAGGTAAGGGAACTGCTAGGCCTGCCTCACTaGTCCCTTTCTCTTGTAGCCAACTCACCACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KLQVRELLGLPH*SLSLVANSPPP Trigger: AGGAGGTGGTGAGTTGGCTACAAGAGAAAGGGACAAGTGAGGCAGGCCTAGCAGTTCCCTTACCTGAAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAACCCACATTTATAGTTTaGTTCAGGGCACTGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQPTFIV*FRALKT Trigger: TGTTTTCAGTGCCCTGAATCAAACTATAAATGTGGG...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR TCA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCTTAAAGACCCTAGAATaGTGTCTGGGAATGCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFLKTLE*CLGMLV Trigger: GACTAGCATTCCCAGACATCATTCTAGGGTCTTTAA...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CCA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCTGGGATGGGAGACAGTaGATTATCCAATTTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFWDGRQ*IIQFVF Trigger: GAACACAAATTGGATAATCCACTGTCTCCCATCCCA...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR TCA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCAAGTTCAATTTACAGTaGAAACTTACTCCCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFKFNLQ*KLTPPP Trigger: TGGTGGGGGAGTAAGTTTTCACTGTAAATTGAACTT...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGATTCAGGGCACTaGAAACACTTGCACATAAAT | + |
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Preference number: 4 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQFDSGH*KHLHIN Trigger: ATTTATGTGCAAGTGTTTTCAGTGCCCTGAATCAAA...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR GCA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAAATTACGAGAGGGAACTaGAGTATGGATTTGAAAACT | + |
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Preference number: 4 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQITRGN*SMDLKT Trigger: AGTTTTCAAATCCATACTGCAGTTCCCTCTCGTAAT...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR GCA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCAATGCTAGTCTCTCTTaGTTTAGAGAGAATAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFNASLS*FRENSP Trigger: TGGACTATTCTCTCTAAAGCAAGAGAGACTAGCATT...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CAA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCCGCGGCGGCTCCAATTaGTCGGCTGCGGCGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFRGGSN*SAAAAA Trigger: GGCTGCCGCCGCAGCCGACAAATTGGAGCCGCCGCG...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CAA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAACAGCCACTCGTGCACTaGCCGGGAGTACTCGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQQPLVH*PGVLAG Trigger: GCCCGCGAGTACTCCCGGCAAGTGCACGAGTGGCTG...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CAA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCCTAGGCCTGCCTCACTaGTCCCTTTCTCTTGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFLGLPH*SLSLVA Trigger: GGCTACAAGAGAAAGGGACAAGTGAGGCAGGCCTAG...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CAA 90 bp | CTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAATTTGTGTTCTCATTCAGGCTTACCCAGCTCTaGGCTCCCAAGTTAATGTTA | + |
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Preference number: 5 (lower is better) Translates to: LTTSWDGRQWIIQFVFSFRLTQL*APKLML Trigger: TAACATTAACTTGGGAGCCAAGAGCTGGGTAAGCCT...GAATGAGAACACAAATTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CAA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAACCCCACATTTATAGTTaGATTCAGGGCACTGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQPHIYS*IQGTEN Trigger: GTTTTCAGTGCCCTGAATCAAACTATAAATGTGGGG...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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| CDS-3UTR CAA 90 bp | TTCTCTTGTAGCCAACTCACCACCTCCTGGGATGGGAGACAGTGGATTATCCAAATCATCATGAGAAACTaGCCCCTAAATACATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: FSCSQLTTSWDGRQWIIQIIMRN*PLNTCS Trigger: TGAACATGTATTTAGGGGCAAGTTTCTCATGATGAT...TTGGATAATCCACTGTCTCCCATCCCAGGAGGTGGTGAGTTGGCTACAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259963.4 |
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