Pregenerated sensors for FAM89B (Homo sapiens)
Ensembl gene IDs: ENSG00000176973Ensembl transcript IDs: ENST00000316409.2, ENST00000449319.2, ENST00000530349.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTGCGCTGAGTCGAGGTTaGCAGGACGACGCGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLALSRG*QDDAGR Trigger: CCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGC...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR GCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTGCCCCACCATCTCCTTaGGCAGCGCGGCCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLAPPSP*AARPAL Trigger: CAGCGCTGGCCGCGCTGCGCAAGGAGATGGTGGGGC...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530349.2 |
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| CDS-3UTR TCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTCAGCGCGGCCAGCGCTaGGTCGAGGTTGACAGGACG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLQRGQR*VEVDRT Trigger: CGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTG...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR TCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTGCAGGCTCCGAAGTCTaGGGGCTTGCCGGAGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLAGSEV*GLAGGG Trigger: TCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGC...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR GCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTCCCACAGCATCTCCTTaGGCAGCGCGGCCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLPTASP*AARPAL Trigger: CAGCGCTGGCCGCGCTGCGCAAGGAGATGCTGTGGG...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTGGTCAGGAGGCAGGCTaGCATCGGGAGGCTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLGQEAG*HREAPR Trigger: ACGAGGAGCCTCCCGATGCCAGCCTGCCTCCTGACC...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTGGGCACAGTAAGGGGTaGCGGGTCAGGAGGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLGHSKG*RVRRQA Trigger: AGCCTGCCTCCTGACCCGCCACCCCTTACTGTGCCC...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR GCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTCAGACAACATCTCCTTaGGCAGCGCGGCCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLQTTSP*AARPAL Trigger: CAGCGCTGGCCGCGCTGCGCAAGGAGATGTTGTCTG...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449319.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTCAGGCCCGCATCCGGTaGGTAGGAGCTGTCCGAATG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLQARIR*VGAVRM Trigger: CATTCGGACAGCTCCTACCCACCGGATGCGGGCCTG...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTCGGGCATTGTGCGTCTaGGGCACAGTAAGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLRALCV*GTVRGG Trigger: GCCACCCCTTACTGTGCCCCAGACGCACAATGCCCG...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR GCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTAAGCGGAAGGGAAGATaGTTCGGGCCCCACCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLKRKGR*FGPHRK Trigger: CTTGCGGTGGGGCCCGAAGCATCTTCCCTTCCGCTT...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR GCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTTGCCGCAGCCCCACCTaGAGACAACATCTCCTTGCG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLCRSPT*RQHLLA Trigger: CGCAAGGAGATGTTGTCTGCAGGTGGGGCTGCGGCA...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449319.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTCCCACCCCCTCTGGATaGGCCGGGCCTCTCTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLPTPSG*AGPLLK Trigger: TTTTAAGAGAGGCCCGGCCCATCCAGAGGGGGTGGG...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000316409.2 ENST00000449319.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTTATTGGGACGGGTCCTaGAGCCCTTCCAGGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLYWDGS*SPSRAE Trigger: CTCTGCCCTGGAAGGGCTCCAGGACCCGTCCCAATA...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR TCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTTGGCAGTTTCGCCTCTaGGGAATACATGCCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLWQFRL*GIHAWP Trigger: GGGCCAGGCATGTATTCCTCAGAGGCGAAACTGCCA...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR GCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTAAGGACATGTCCAACTaGCGCAGCCCCACCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLKDMSN*RSPTCR Trigger: TCTGCAGGTGGGGCTGCGGCAGTTGGACATGTCCTT...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449319.2 |
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| CDS-3UTR GCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTAAGGACATGTCCAACTaGCGCAGCCCCACCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLKDMSN*RSPTIS Trigger: GGAGATGGTGGGGCTGCGGCAGTTGGACATGTCCTT...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530349.2 |
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| CDS-3UTR TCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTCACGTCGCGCAAAGCTaGGAAAAGGCAACGGGACAT | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLHVAQS*EKATGH Trigger: ATGTCCCGTTGCCTTTTCTCAGCTTTGCGCGACGTG...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTTCACTCAAGGGGAGATaGAAAAATGCGGCGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLSLKGR*KNAAEG Trigger: CCCCTCCGCCGCATTTTTCCATCTCCCCTTGAGTGA...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTAAAAGGCAACGGTTGTaGGACCACGTCGCGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLKRQRL*DHVAQS Trigger: GCTTTGCGCGACGTGGTCCCACAACCGTTGCCTTTT...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTTACAGGCCCCACAGCTaGCACAACAAGGACATGTCC | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLYRPHS*HNKDMS Trigger: GGACATGTCCTTGTTGTGCCAGCTGTGGGGCCTGTA...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR TCA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATGCGCTGAGTCGAGGTTaGCAGGACGACGCGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: NDAECIYLSTRPGDRPLNALSRG*QDDAGR Trigger: CCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGC...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR TCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTTTTGTAGTCCTGGATTaGCTCGTACAGGCCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLFVVLD*LVQAPQ Trigger: CTGTGGGGCCTGTACGAGTCAATCCAGGACTACAAA...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR TCA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATCAGCGCGGCCAGCGCTaGGTCGAGGTTGACAGGACG | + |
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Preference number: 4 (lower is better) Translates to: NDAECIYLSTRPGDRPLNQRGQR*VEVDRT Trigger: CGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTG...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CCA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATCGGCTCAGCTCGTCGTaGATGCGGCTGCGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NDAECIYLSTRPGDRPLNRLSSS*MRLRWL Trigger: CAGCCAGCGCAGCCGCATCCACGACGAGCTGAGCCG...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTTTTATCTACGCGCCCTaGAGACCGGCCCCTAAATTT | + |
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Preference number: 4 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLFIYAP*RPAPKF Trigger: AAATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAA...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR CCA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATGGTCAGGAGGCAGGCTaGCATCGGGAGGCTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: NDAECIYLSTRPGDRPLNGQEAG*HREAPR Trigger: ACGAGGAGCCTCCCGATGCCAGCCTGCCTCCTGACC...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CCA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATGGGCACAGTAAGGGGTaGCGGGTCAGGAGGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: NDAECIYLSTRPGDRPLNGHSKG*RVRRQA Trigger: AGCCTGCCTCCTGACCCGCCACCCCTTACTGTGCCC...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CCA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATCAGGCCCGCATCCGGTaGGTAGGAGCTGTCCGAATG | + |
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Preference number: 4 (lower is better) Translates to: NDAECIYLSTRPGDRPLNQARIR*VGAVRM Trigger: CATTCGGACAGCTCCTACCCACCGGATGCGGGCCTG...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CCA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATCGGGCATTGTGCGTCTaGGGCACAGTAAGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NDAECIYLSTRPGDRPLNRALCV*GTVRGG Trigger: GCCACCCCTTACTGTGCCCCAGACGCACAATGCCCG...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CCA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATCCCACCCCCTCTGGATaGGCCGGGCCTCTCTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: NDAECIYLSTRPGDRPLNPTPSG*AGPLLK Trigger: TTTTAAGAGAGGCCCGGCCCATCCAGAGGGGGTGGG...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR TCA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATTTTGTAGTCCTGGATTaGCTCGTACAGGCCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: NDAECIYLSTRPGDRPLNFVVLD*LVQAPQ Trigger: CTGTGGGGCCTGTACGAGTCAATCCAGGACTACAAA...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS TCA 90 bp | GCCCCACCATCTCCTTGCGCAGCGCGGCCAGCGCTGAGTCGAGGTTaGCAGGACGACGCGGGCCGGCTGCGGGTCCCGCGTTGGCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: APPSPCAARPALSRG*QDDAGRLRVPRWRR Trigger: GCGCCGCCAACGCGGGACCCGCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGGTGGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530349.2 |
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| CDS TCA 90 bp | CCCACAGCATCTCCTTGCGCAGCGCGGCCAGCGCTGAGTCGAGGTTaGCAGGACGACGCGGGCCGGCTGCGGGTCCCGCGTTGGCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: PTASPCAARPALSRG*QDDAGRLRVPRWRR Trigger: GCGCCGCCAACGCGGGACCCGCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGCTGTGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS TCA 90 bp | CAACTGCCGCAGCCCCACCATCTCCTTGCGCAGCGCGGCCAGCGCTaGGTCGAGGTTGACAGGACGACGCGGGCCGGCTGCGGGTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: QLPQPHHLLAQRGQR*VEVDRTTRAGCGSR Trigger: GCGGGACCCGCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGGTGGGGCTGCGGCAGTTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530349.2 |
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| CDS TCA 90 bp | CAGACAACATCTCCTTGCGCAGCGCGGCCAGCGCTGAGTCGAGGTTaGCAGGACGACGCGGGCCGGCTGCGGGTCCCGCGTTGGCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: QTTSPCAARPALSRG*QDDAGRLRVPRWRR Trigger: GCGCCGCCAACGCGGGACCCGCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGTTGTCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449319.2 |
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| CDS TCA 90 bp | AGCCCCACCTGCAGACAACATCTCCTTGCGCAGCGCGGCCAGCGCTaGGTCGAGGTTGACAGGACGACGCGGGCCGGCTGCGGGTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: SPTCRQHLLAQRGQR*VEVDRTTRAGCGSR Trigger: GCGGGACCCGCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGTTGTCTGCAGGTGGGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449319.2 |
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| CDS-3UTR CAA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTCCCCACAGCATCTCCTaGCGCAGCGCGGCCAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLPHSIS*RSAASA Trigger: AGCGCTGGCCGCGCTGCGCAAGGAGATGCTGTGGGG...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CAA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTAGCCCCACCATCTCCTaGCGCAGCGCGGCCAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLSPTIS*RSAASA Trigger: AGCGCTGGCCGCGCTGCGCAAGGAGATGGTGGGGCT...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530349.2 |
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| CDS-3UTR CAA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTAGCGCTGAGTCGAGGTaGACAGGACGACGCGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLSAESR*TGRRGP Trigger: CGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCT...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR CAA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTGCAGACAACATCTCCTaGCGCAGCGCGGCCAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLADNIS*RSAASA Trigger: AGCGCTGGCCGCGCTGCGCAAGGAGATGTTGTCTGC...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449319.2 |
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| CDS-3UTR CAA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTCCGAAGTCTGAGGGCTaGCCGGAGGGGGAGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLPKSEG*PEGEFL Trigger: CAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGG...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR CAA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTTTAAAAAGGCAACGGTaGTGGGACCACGTCGCGCAA | + |
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Preference number: 5 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLLKRQR*WDHVAQ Trigger: TTGCGCGACGTGGTCCCACAACCGTTGCCTTTTTAA...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CAA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTGTTTGTAGTCCTGGATaGACTCGTACAGGCCCCACA | + |
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Preference number: 5 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLVCSPG*TRTGPT Trigger: TGTGGGGCCTGTACGAGTCAATCCAGGACTACAAAC...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR CAA 90 bp | AAGGCGCAGGCTCCGAAGTCTGAGGGCTTGCCGGAGGGGGAGTTTCTGAGCCTTGCAGAAGCTCAGGTCTaGGCACAGGTGTTTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: KAQAPKSEGLPEGEFLSLAEAQV*AQVFVV Trigger: GACTACAAACACCTGTGCCAAGACCTGAGCTTCTGC...AAGGCTCAGAAACTCCCCCTCCGGCAAGCCCTCAGACTTCGGAGCCTGCGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS-3UTR CAA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATAGCGCTGAGTCGAGGTaGACAGGACGACGCGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: NDAECIYLSTRPGDRPLNSAESR*TGRRGP Trigger: CGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCT...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS-3UTR CAA 90 bp | AACGACGCTGAGTGTATTTATTTATCTACGCGCCCTGGAGACCGGCCCCTAAATGCAGAAGCTCAGGTCTaGGCACAGGTGTTTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: NDAECIYLSTRPGDRPLNAEAQV*AQVFVV Trigger: GACTACAAACACCTGTGCCAAGACCTGAGCTTCTGC...ATTTAGGGGCCGGTCTCCAGGGCGCGTAGATAAATAAATACACTCAGCGTCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS CAA 90 bp | CCCCACAGCATCTCCTTGCGCAGCGCGGCCAGCGCTGAGTCGAGGTaGACAGGACGACGCGGGCCGGCTGCGGGTCCCGCGTTGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: PHSISLRSAASAESR*TGRRGPAAGPALAA Trigger: CGCCGCCAACGCGGGACCCGCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGCTGTGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS CAA 90 bp | AGCCCCACCATCTCCTTGCGCAGCGCGGCCAGCGCTGAGTCGAGGTaGACAGGACGACGCGGGCCGGCTGCGGGTCCCGCGTTGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: SPTISLRSAASAESR*TGRRGPAAGPALAA Trigger: CGCCGCCAACGCGGGACCCGCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGGTGGGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530349.2 |
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| CDS TCA 72 bp | TCTCCTTGCGCAGCGCGGCCAGCGCTGAGTCGAGGTTaGCAGGACGACGCGGGCCGGCTGCGGGTCCCGCGT | + |
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Preference number: 6 (lower is better) Translates to: SPCAARPALSRG*QDDAGRLRVPR Trigger: ACGCGGGACCCGCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS CAA 72 bp | ATCTCCTTGCGCAGCGCGGCCAGCGCTGAGTCGAGGTaGACAGGACGACGCGGGCCGGCTGCGGGTCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: ISLRSAASAESR*TGRRGPAAGPA Trigger: CGCGGGACCCGCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGAT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316409.2 ENST00000449319.2 ENST00000530349.2 |
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| CDS CAA 90 bp | GCAGACAACATCTCCTTGCGCAGCGCGGCCAGCGCTGAGTCGAGGTaGACAGGACGACGCGGGCCGGCTGCGGGTCCCGCGTTGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: ADNISLRSAASAESR*TGRRGPAAGPALAA Trigger: CGCCGCCAACGCGGGACCCGCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGTTGTCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449319.2 |
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| CDS TCA 72 bp | GCCCCACAGCATCTCCTTGCGCAGCGCGGCCAGCGCTaGGTCGAGGTTGACAGGACGACGCGGGCCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: APQHLLAQRGQR*VEVDRTTRAGC Trigger: GCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGCTGTGGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS TCA 72 bp | CAGCCCCACCATCTCCTTGCGCAGCGCGGCCAGCGCTaGGTCGAGGTTGACAGGACGACGCGGGCCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QPHHLLAQRGQR*VEVDRTTRAGC Trigger: GCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGGTGGGGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530349.2 |
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| CDS TCA 72 bp | TGCAGACAACATCTCCTTGCGCAGCGCGGCCAGCGCTaGGTCGAGGTTGACAGGACGACGCGGGCCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CRQHLLAQRGQR*VEVDRTTRAGC Trigger: GCAGCCGGCCCGCGTCGTCCTGTCAACCTCGACTCAGCGCTGGCCGCGCTGCGCAAGGAGATGTTGTCTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449319.2 |
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| CDS TCA 72 bp | GCTCAGGTCTTGGCACAGGTGTTTGTAGTCCTGGATTaGCTCGTACAGGCCCCACAGCATCTCCTTGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: AQVLAQVFVVLD*LVQAPQHLLAQ Trigger: CTGCGCAAGGAGATGCTGTGGGGCCTGTACGAGTCAATCCAGGACTACAAACACCTGTGCCAAGACCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS TCA 72 bp | AAAAGGCAACGGTTGTGGGACCACGTCGCGCAAAGCTaGGAAAAGGCAACGGGACATCCACTCACTCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: KRQRLWDHVAQS*EKATGHPLTQG Trigger: CCCTTGAGTGAGTGGATGTCCCGTTGCCTTTTCTCAGCTTTGCGCGACGTGGTCCCACAACCGTTGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS CAA 72 bp | AGCTCAGGTCTTGGCACAGGTGTTTGTAGTCCTGGATaGACTCGTACAGGCCCCACAGCATCTCCTTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SSGLGTGVCSPG*TRTGPTASPCA Trigger: TGCGCAAGGAGATGCTGTGGGGCCTGTACGAGTCAATCCAGGACTACAAACACCTGTGCCAAGACCTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316409.2 |
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| CDS CAA 72 bp | AGCTCAGGTCTTGGCACAGGTGTTTGTAGTCCTGGATaGACTCGTACAGGCCCCACAGCTGGCACAACAAGG | + |
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Preference number: 6 (lower is better) Translates to: SSGLGTGVCSPG*TRTGPTAGTTR Trigger: CCTTGTTGTGCCAGCTGTGGGGCCTGTACGAGTCAATCCAGGACTACAAACACCTGTGCCAAGACCTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449319.2 ENST00000530349.2 |
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