Pregenerated sensors for FAM89A (Homo sapiens)
Ensembl gene IDs: ENSG00000182118Ensembl transcript IDs: ENST00000366654.5, ENST00000466258.1, ENST00000494111.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCACTAAGGCCTTTCACCGAGATCCTCTTGTTATATTCTCATTATaGATCCCCAGCAGGTGCACCTCAATAAATAGGTGTGGAGGATAC | + |
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Preference number: 1 (lower is better) Translates to: PTKAFHRDPLVIFSL*IPSRCTSINRCGGY Trigger: GTATCCTCCACACCTATTTATTGAGGTGCACCTGCTGGGGATTCATAATGAGAATATAACAAGAGGATCTCGGTGAAAGGCCTTAGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR CAA 90 bp | GCTCATCCCCTGTGCCCGAGGACCGTCCACAACGGAGGTGCTTTCTaGCAAGAGAAGCAGCAAATGATGACAGCGTGTCCAGTAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: AHPLCPRTVHNGGAF*QEKQQMMTACPVGR Trigger: CCTTCCTACTGGACACGCTGTCATCATTTGCTGCTTCTCTTGCAAGAAAGCACCTCCGTTGTGGACGGTCCTCGGGCACAGGGGATGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCACCGAGATCCTCTTGTTATATTCTCATTATGAATCCCCAGCAGGTGCACGTCCACAACGGAGGTaGTTTCTTGCAAGAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PFTEILLLYSHYESPAGARPQRR*FLAREA Trigger: TGCTTCTCTTGCAAGAAAGCACCTCCGTTGTGGACG...TGCACCTGCTGGGGATTCATAATGAGAATATAACAAGAGGATCTCGGTGAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACACCCACTAAGGCCTTTCACCGAGATCCTCTTGTTATATTCTCATTATAGCAGACTGCCACCATaGATCCGCGGAGAACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: TKHPLRPFTEILLLYSHYSRLPP*IRGELP Trigger: AGGGAGTTCTCCGCGGATGCATGGTGGCAGTCTGCT...ATAATGAGAATATAACAAGAGGATCTCGGTGAAAGGCCTTAGTGGGTGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR-3UTR TCA 90 bp | TTAATACATCCCAAACTGGAAGCAAGAACCCTAACACAAAGAGGATTGGAATACGTTATATTCTCATTATaGATCCCCAGCAGGTGCACC | + |
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Preference number: 2 (lower is better) Translates to: LIHPKLEARTLTQRGLEYVIFSL*IPSRCT Trigger: GGTGCACCTGCTGGGGATTCATAATGAGAATATAAC...GTATTCCAATCCTCTTTGTGTTAGGGTTCTTGCTTCCAGTTTGGGATGTATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR-3UTR TCA 90 bp | AACTTTTTCAGTAAAAAGCTTTCACCGAATCACTGGGCAGTTAGTAATGCAGCTGAGGAAGGGAAGCAGTaGAATGGTGGTTTTAATACA | + |
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Preference number: 2 (lower is better) Translates to: NFFSKKLSPNHWAVSNAAEEGKQ*NGGFNT Trigger: TGTATTAAAACCACCATTTCACTGCTTCCCTTCCTC...AGCTGCATTACTAACTGCCCAGTGATTCGGTGAAAGCTTTTTACTGAAAAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR-3UTR CCA 90 bp | TCAACATGTCTTCGTATTATCTTCCTTCCTCTCGTATCTGATAGACAAAGAATGCTTTCACCGAATCACTaGGCAGTTAGTAATGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: STCLRIIFLPLVSDRQRMLSPNH*AVSNAA Trigger: AGCTGCATTACTAACTGCCCAGTGATTCGGTGAAAG...CATTCTTTGTCTATCAGATACGAGAGGAAGGAAGATAATACGAAGACATGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR GCA 72 bp | CTGCCTACAAATGAAACTGGTAGCGCTCATCCCCTGTaGCCGAGGACCGTCCACAACGGAGGTGCTTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: LPTNETGSAHPL*PRTVHNGGAFL Trigger: CAAGAAAGCACCTCCGTTGTGGACGGTCCTCGGGCACAGGGGATGAGCGCTACCAGTTTCATTTGTAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR GCA 72 bp | TCATCCCCTGTGCCCGAGGACCGTCCACAACGGAGGTaGTTTCTTGCAAGAGAAGCAGCAAATGATGACAGC | + |
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Preference number: 3 (lower is better) Translates to: SSPVPEDRPQRR*FLAREAANDDS Trigger: GCTGTCATCATTTGCTGCTTCTCTTGCAAGAAAGCACCTCCGTTGTGGACGGTCCTCGGGCACAGGGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR TCA 72 bp | AGGTGCACCTCAATAAATAGGTGTGGAGGATACTGCTaGGGACCTCTAGGTCACCTAAGCAGAAACTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: RCTSINRCGGYC*GPLGHLSRNCC Trigger: GCAGCAGTTTCTGCTTAGGTGACCTAGAGGTCCTCAGCAGTATCCTCCACACCTATTTATTGAGGTGCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR-3UTR CAA 90 bp | CACACAAAACACCCACTAAGGCCTTTCACCGAGATCCTCTTGTTATATTCTCATAACGGAGGTGCTTTCTaGCAAGAGAAGCAGCAAATG | + |
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Preference number: 3 (lower is better) Translates to: HTKHPLRPFTEILLLYSHNGGAF*QEKQQM Trigger: CATTTGCTGCTTCTCTTGCAAGAAAGCACCTCCGTT...ATGAGAATATAACAAGAGGATCTCGGTGAAAGGCCTTAGTGGGTGTTTTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR TCA 72 bp | GCCTTTCACCGAGATCCTCTTGTTATATTCTCATTATaGATCCCCAGCAGGTGCACCTCAATAAATAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: AFHRDPLVIFSL*IPSRCTSINRC Trigger: ACACCTATTTATTGAGGTGCACCTGCTGGGGATTCATAATGAGAATATAACAAGAGGATCTCGGTGAAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | GACAGCGTGTCCAGTAGGAAGGGCTTCCCAACAGTCACATCCCTCCCAAGACCCGAGCGGCGTCCAGGTTaGGAGGCTTGGCGGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: DSVSSRKGFPTVTSLPRPERRPG*EAWRAA Trigger: CGCTGCCCGCCAAGCCTCCCAACCTGGACGCCGCTC...GGGTCTTGGGAGGGATGTGACTGTTGGGAAGCCCTTCCTACTGGACACGCTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | GCAGCAAATGATGACAGCGTGTCCAGTAGGAAGGGCTTCCCAACAGTCACATCCTACAGCCGCTCCAGGTaGCGCCAGCCCCCAGACGCG | + |
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Preference number: 4 (lower is better) Translates to: AANDDSVSSRKGFPTVTSYSRSR*RQPPDA Trigger: CGCGTCTGGGGGCTGGCGGCACCTGGAGCGGCTGTA...GGATGTGACTGTTGGGAAGCCCTTCCTACTGGACACGCTGTCATCATTTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | AAACTGGTAGCGCTCATCCCCTGTGCCCGAGGACCGTCCACAACGGAGGTGCTTGGAGGCTGCCTGGCATaGCCCCTTGTACTCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: KLVALIPCARGPSTTEVLGGCLA*PLVLLN Trigger: ATTCAGGAGTACAAGGGGGCATGCCAGGCAGCCTCC...AAGCACCTCCGTTGTGGACGGTCCTCGGGCACAGGGGATGAGCGCTACCAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | CAAGAGAAGCAGCAAATGATGACAGCGTGTCCAGTAGGAAGGGCTTCCCAACAGCCCGCTCAAGCTCTTTaGCAGCGGGGGCAGCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: QEKQQMMTACPVGRASQQPAQAL*QRGQPV Trigger: GACGGGCTGCCCCCGCTGCCAAAGAGCTTGAGCGGG...CTGTTGGGAAGCCCTTCCTACTGGACACGCTGTCATCATTTGCTGCTTCTCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | GTGCCCGAGGACCGTCCACAACGGAGGTGCTTTCTTGCAAGAGAAGCAGCAAATCCAGAATCCAGTCGCTaGTGGAGAGGGAGGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: VPEDRPQRRCFLAREAANPESSR*WRGRRQ Trigger: CTGTCTCCTCCCTCTCCAGCAGCGACTGGATTCTGG...ATTTGCTGCTTCTCTTGCAAGAAAGCACCTCCGTTGTGGACGGTCCTCGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR TCA 90 bp | GCGCTCATCCCCTGTGCCCGAGGACCGTCCACAACGGAGGTGCTTTCTTGCAAGGTTATATTCTCATTATaGATCCCCAGCAGGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: ALIPCARGPSTTEVLSCKVIFSL*IPSRCT Trigger: GGTGCACCTGCTGGGGATTCATAATGAGAATATAAC...CTTGCAAGAAAGCACCTCCGTTGTGGACGGTCCTCGGGCACAGGGGATGAGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| 3UTR CAA 72 bp | CTGTGCCCGAGGACCGTCCACAACGGAGGTGCTTTCTaGCAAGAGAAGCAGCAAATGATGACAGCGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LCPRTVHNGGAF*QEKQQMMTACP Trigger: TGGACACGCTGTCATCATTTGCTGCTTCTCTTGCAAGAAAGCACCTCCGTTGTGGACGGTCCTCGGGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | CAAGAGAAGCAGCAAATGATGACAGCGTGTCCAGTAGGAAGGGCTTCCCAACAGGCCATCAAAGCAGACTaGCACCATGCATCCGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: QEKQQMMTACPVGRASQQAIKAD*HHASAE Trigger: CTCCGCGGATGCATGGTGGCAGTCTGCTTTGATGGC...CTGTTGGGAAGCCCTTCCTACTGGACACGCTGTCATCATTTGCTGCTTCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR TCA 90 bp | CAAGAGAAGCAGCAAATGATGACAGCGTGTCCAGTAGGAAGGGCTTCCCAACAGTGTGGAGGATACTGCTaGGGACCTCTAGGTCACCTA | + |
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Preference number: 4 (lower is better) Translates to: QEKQQMMTACPVGRASQQCGGYC*GPLGHL Trigger: TAGGTGACCTAGAGGTCCTCAGCAGTATCCTCCACA...CTGTTGGGAAGCCCTTCCTACTGGACACGCTGTCATCATTTGCTGCTTCTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | AACTTTTTCAGTAAAAAGCTTTCACCGAATCACTGGGCAGTTAGTAATGCAGCTCCGCCCGACGCCGAGTaGAGCAGCCCGCTCAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: NFFSKKLSPNHWAVSNAAPPDAE*SSPLKL Trigger: GAGCTTGAGCGGGCTGCTGCACTCGGCGTCGGGCGG...AGCTGCATTACTAACTGCCCAGTGATTCGGTGAAAGCTTTTTACTGAAAAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | CCTCACACAAAACACCCACTAAGGCCTTTCACCGAGATCCTCTTGTTATATTCTAGCGCTCATCCCCTGTaGCCGAGGACCGTCCACAAC | + |
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Preference number: 4 (lower is better) Translates to: PHTKHPLRPFTEILLLYSSAHPL*PRTVHN Trigger: GTTGTGGACGGTCCTCGGGCACAGGGGATGAGCGCT...AGAATATAACAAGAGGATCTCGGTGAAAGGCCTTAGTGGGTGTTTTGTGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | TTAACTTTTTCAGTAAAAAGCTTTCACCGAATCACTGGGCAGTTAGTAATGCAGCCAGGTTGGGAGGCTTaGCGGGCAGCGCTGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: LTFSVKSFHRITGQLVMQPGWEA*RAALPP Trigger: GGGCGGCAGCGCTGCCCGCCAAGCCTCCCAACCTGG...CTGCATTACTAACTGCCCAGTGATTCGGTGAAAGCTTTTTACTGAAAAAGTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | ACCCTAACACAAAGAGGATTGGAATACTCTACCATCTGTAAGGAAGTAGCTAGCTGGATGCGCGACTTCTaGGCGTACAGCCGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TLTQRGLEYSTICKEVASWMRDF*AYSRSR Trigger: CCTGGAGCGGCTGTACGCGCAGAAGTCGCGCATCCA...GCTAGCTACTTCCTTACAGATGGTAGAGTATTCCAATCCTCTTTGTGTTAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR TCA 90 bp | TTTTCAGTAAAAAGCTTTCACCGAATCACTGGGCAGTTAGTAATGCAGCTTACAGGAGGAGACAGGCAGTaGCAAGTCCCGAGGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FSVKSFHRITGQLVMQLTGGDRQ*QVPRRA Trigger: GGCCCTCCTCGGGACTTGTCACTGCCTGTCTCCTCC...TGTAAGCTGCATTACTAACTGCCCAGTGATTCGGTGAAAGCTTTTTACTGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR TCA 90 bp | GCAGCAAATGATGACAGCGTGTCCAGTAGGAAGGGCTTCCCAACAGTCACATCCCCATCTTACAGTGAGTaGTACATCACATTGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: AANDDSVSSRKGFPTVTSPSYSE*YITLAC Trigger: GCAAGCCAATGTGATGTATCACTCACTGTAAGATGG...GGATGTGACTGTTGGGAAGCCCTTCCTACTGGACACGCTGTCATCATTTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | AACTTTTTCAGTAAAAAGCTTTCACCGAATCACTGGGCAGTTAGTAATGCAGCTCGGCTCAGCTCGTCCTaGATGCGCGACTTCTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: NFFSKKLSPNHWAVSNAARLSSS*MRDFCA Trigger: CGCGCAGAAGTCGCGCATCCAGGACGAGCTGAGCCG...AGCTGCATTACTAACTGCCCAGTGATTCGGTGAAAGCTTTTTACTGAAAAAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | CACACAAAACACCCACTAAGGCCTTTCACCGAGATCCTCTTGTTATATTCTCATAGCGTAAGTGCAGTCTaGGCTGGAGGCTGCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: HTKHPLRPFTEILLLYSHSVSAV*AGGCLA Trigger: TGCCAGGCAGCCTCCAGCCCAGACTGCACTTACGCT...ATGAGAATATAACAAGAGGATCTCGGTGAAAGGCCTTAGTGGGTGTTTTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | CCTCACACAAAACACCCACTAAGGCCTTTCACCGAGATCCTCTTGTTATATTCTGAATCCAGTCGCTGCTaGAGAGGGAGGAGACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: PHTKHPLRPFTEILLLYSESSRC*RGRRQA Trigger: TGCCTGTCTCCTCCCTCTCCAGCAGCGACTGGATTC...AGAATATAACAAGAGGATCTCGGTGAAAGGCCTTAGTGGGTGTTTTGTGTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR TCA 90 bp | GCAGCAAATGATGACAGCGTGTCCAGTAGGAAGGGCTTCCCAACAGTCACATCCGAGGAAGGGAAGCAGTaGAATGGTGGTTTTAATACA | + |
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Preference number: 4 (lower is better) Translates to: AANDDSVSSRKGFPTVTSEEGKQ*NGGFNT Trigger: TGTATTAAAACCACCATTTCACTGCTTCCCTTCCTC...GGATGTGACTGTTGGGAAGCCCTTCCTACTGGACACGCTGTCATCATTTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | GCAAGAACCCTAACACAAAGAGGATTGGAATACTCTACCATCTGTAAGGAAGTAGACCAACCATCTCTTTaGGGAGCAGCGCCAGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: ARTLTQRGLEYSTICKEVDQPSL*GAAPER Trigger: CCGCTCTGGCGCTGCTCCGCAAAGAGATGGTTGGTC...TACTTCCTTACAGATGGTAGAGTATTCCAATCCTCTTTGTGTTAGGGTTCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | TTAATACATCCCAAACTGGAAGCAAGAACCCTAACACAAAGAGGATTGGAATACGTCTGGGCTGGAGGCTaGCTGGCATGCCCCCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LIHPKLEARTLTQRGLEYVWAGG*LACPLV Trigger: TACAAGGGGGCATGCCAGGCAGCCTCCAGCCCAGAC...GTATTCCAATCCTCTTTGTGTTAGGGTTCTTGCTTCCAGTTTGGGATGTATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | ACAAAACACCCACTAAGGCCTTTCACCGAGATCCTCTTGTTATATTCTCATTATCGGTCCCTCCTGTCGTaGAGGGAGTTCTGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TKHPLRPFTEILLLYSHYRSLLS*REFCSW Trigger: CCAGGAGCAGAACTCCCTGCACGACAGGAGGGACCG...ATAATGAGAATATAACAAGAGGATCTCGGTGAAAGGCCTTAGTGGGTGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | GTGCCCGAGGACCGTCCACAACGGAGGTGCTTTCTTGCAAGAGAAGCAGCAAATTACATCACATTGGCTTaGCCCAGTTTTTGTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VPEDRPQRRCFLAREAANYITLA*PSFCVL Trigger: AAGAACACAAAAACTGGGGCAAGCCAATGTGATGTA...ATTTGCTGCTTCTCTTGCAAGAAAGCACCTCCGTTGTGGACGGTCCTCGGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | TTAACTTTTTCAGTAAAAAGCTTTCACCGAATCACTGGGCAGTTAGTAATGCAGGGGCTGGAGGCTGCCTaGCATGCCCCCTTGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: LTFSVKSFHRITGQLVMQGLEAA*HAPLYS Trigger: GGAGTACAAGGGGGCATGCCAGGCAGCCTCCAGCCC...CTGCATTACTAACTGCCCAGTGATTCGGTGAAAGCTTTTTACTGAAAAAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | TTAACTTTTTCAGTAAAAAGCTTTCACCGAATCACTGGGCAGTTAGTAATGCAGAAGTGCAGTCTGGGCTaGAGGCTGCCTGGCATGCCC | + |
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Preference number: 4 (lower is better) Translates to: LTFSVKSFHRITGQLVMQKCSLG*RLPGMP Trigger: GGGCATGCCAGGCAGCCTCCAGCCCAGACTGCACTT...CTGCATTACTAACTGCCCAGTGATTCGGTGAAAGCTTTTTACTGAAAAAGTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | TTTTCAGTAAAAAGCTTTCACCGAATCACTGGGCAGTTAGTAATGCAGCTTACATCAGCTCGTCCTGGATaGGCGACTTCTGCGCGTACA | + |
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Preference number: 4 (lower is better) Translates to: FSVKSFHRITGQLVMQLTSARPG*ATSART Trigger: TGTACGCGCAGAAGTCGCGCATCCAGGACGAGCTGA...TGTAAGCTGCATTACTAACTGCCCAGTGATTCGGTGAAAGCTTTTTACTGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | CACACAAAACACCCACTAAGGCCTTTCACCGAGATCCTCTTGTTATATTCTCATAAGGACATGTCCAGCTaGCGGAGACCAACCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: HTKHPLRPFTEILLLYSHKDMSS*RRPTIS Trigger: AGAGATGGTTGGTCTCCGCCAGCTGGACATGTCCTT...ATGAGAATATAACAAGAGGATCTCGGTGAAAGGCCTTAGTGGGTGTTTTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | TCAACATGTCTTCGTATTATCTTCCTTCCTCTCGTATCTGATAGACAAAGAATGAGCAGACTGCCACCATaGATCCGCGGAGAACTCCCT | + |
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Preference number: 4 (lower is better) Translates to: STCLRIIFLPLVSDRQRMSRLPP*IRGELP Trigger: AGGGAGTTCTCCGCGGATGCATGGTGGCAGTCTGCT...CATTCTTTGTCTATCAGATACGAGAGGAAGGAAGATAATACGAAGACATGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | GCAAGAACCCTAACACAAAGAGGATTGGAATACTCTACCATCTGTAAGGAAGTACGTCCACAACGGAGGTaGTTTCTTGCAAGAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: ARTLTQRGLEYSTICKEVRPQRR*FLAREA Trigger: TGCTTCTCTTGCAAGAAAGCACCTCCGTTGTGGACG...TACTTCCTTACAGATGGTAGAGTATTCCAATCCTCTTTGTGTTAGGGTTCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR GCA 90 bp | TTAATACATCCCAAACTGGAAGCAAGAACCCTAACACAAAGAGGATTGGAATACTCGTGCAGGGAGTTCTaGTCCTGGAAATATTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LIHPKLEARTLTQRGLEYSCREF*SWKYSS Trigger: GGAGGAATATTTCCAGGAGCAGAACTCCCTGCACGA...GTATTCCAATCCTCTTTGTGTTAGGGTTCTTGCTTCCAGTTTGGGATGTATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | GCAAGAACCCTAACACAAAGAGGATTGGAATACTCTACCATCTGTAAGGAAGTACTTTCACCGAATCACTaGGCAGTTAGTAATGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ARTLTQRGLEYSTICKEVLSPNH*AVSNAA Trigger: AGCTGCATTACTAACTGCCCAGTGATTCGGTGAAAG...TACTTCCTTACAGATGGTAGAGTATTCCAATCCTCTTTGTGTTAGGGTTCTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | CACACAAAACACCCACTAAGGCCTTTCACCGAGATCCTCTTGTTATATTCTCATAGTGATACATCACATTaGCTTGCCCCAGTTTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: HTKHPLRPFTEILLLYSHSDTSH*LAPVFV Trigger: CACAAAAACTGGGGCAAGCCAATGTGATGTATCACT...ATGAGAATATAACAAGAGGATCTCGGTGAAAGGCCTTAGTGGGTGTTTTGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | GCAAGAACCCTAACACAAAGAGGATTGGAATACTCTACCATCTGTAAGGAAGTAAATTACTGGTTTGAGTaGCGGGTGGTTTGCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: ARTLTQRGLEYSTICKEVNYWFE*RVVCFL Trigger: TAGAAAGCAAACCACCCGCCACTCAAACCAGTAATT...TACTTCCTTACAGATGGTAGAGTATTCCAATCCTCTTTGTGTTAGGGTTCTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR TCA 90 bp | ACAAAACACCCACTAAGGCCTTTCACCGAGATCCTCTTGTTATATTCTCATTATTTTGCCATCTTACAGTaGGTGATACATCACATTGGC | + |
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Preference number: 4 (lower is better) Translates to: TKHPLRPFTEILLLYSHYFAILQ*VIHHIG Trigger: GCCAATGTGATGTATCACTCACTGTAAGATGGCAAA...ATAATGAGAATATAACAAGAGGATCTCGGTGAAAGGCCTTAGTGGGTGTTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CCA 90 bp | TCAACATGTCTTCGTATTATCTTCCTTCCTCTCGTATCTGATAGACAAAGAATGAGGGAGTTCTGCTCCTaGAAATATTCCTCCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: STCLRIIFLPLVSDRQRMREFCS*KYSSSS Trigger: TGAAGAGGAGGAATATTTCCAGGAGCAGAACTCCCT...CATTCTTTGTCTATCAGATACGAGAGGAAGGAAGATAATACGAAGACATGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS CCA 90 bp | TCTCTTTGCGGAGCAGCGCCAGAGCGGCGTCCAGGTTGGGAGGCTTaGCGGGCAGCGCTGCCGCCCGGGCCCCGCCGCCGCCCGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SLCGAAPERRPGWEA*RAALPPGPRRRPGP Trigger: GGGGCCCGGGCGGCGGCGGGGCCCGGGCGGCAGCGCTGCCCGCCAAGCCTCCCAACCTGGACGCCGCTCTGGCGCTGCTCCGCAAAGAGA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS GCA 90 bp | AGCTCGTCCTGGATGCGCGACTTCTGCGCGTACAGCCGCTCCAGGTaGCGCCAGCCCCCAGACGCGCCGCCGCCCGACGCCGAGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSSWMRDFCAYSRSR*RQPPDAPPPDAECS Trigger: GCTGCACTCGGCGTCGGGCGGCGGCGCGTCTGGGGGCTGGCGGCACCTGGAGCGGCTGTACGCGCAGAAGTCGCGCATCCAGGACGAGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CAA 90 bp | ACAAATGAAACTGGTAGCGCTCATCCCCTGTGCCCGAGGACCGTCCACAACGGATCCAGGTTGGGAGGCTaGGCGGGCAGCGCTGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: TNETGSAHPLCPRTVHNGSRLGG*AGSAAA Trigger: GGCGGCAGCGCTGCCCGCCAAGCCTCCCAACCTGGA...TCCGTTGTGGACGGTCCTCGGGCACAGGGGATGAGCGCTACCAGTTTCATTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS GCA 90 bp | GAAGAAGCCGTTCTCCAGAGCGTAAGTGCAGTCTGGGCTGGAGGCTaGCTGGCATGCCCCCTTGTACTCCTGAATCGACTCGTAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: EEAVLQSVSAVWAGG*LACPLVLLNRLVEA Trigger: AGCCTCTACGAGTCGATTCAGGAGTACAAGGGGGCATGCCAGGCAGCCTCCAGCCCAGACTGCACTTACGCTCTGGAGAACGGCTTCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000366654.5 ENST00000466258.1 ENST00000494111.1 |
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| CDS GCA 90 bp | AAGTCCCGAGGAGGGCCTCGGTCCCTCCTGTCGTGCAGGGAGTTCTaGTCCTGGAAATATTCCTCCTCTTCATCGAAGAAGCCGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: KSRGGPRSLLSCREF*SWKYSSSSSKKPFS Trigger: GGAGAACGGCTTCTTCGATGAAGAGGAGGAATATTTCCAGGAGCAGAACTCCCTGCACGACAGGAGGGACCGAGGCCCTCCTCGGGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000366654.5 ENST00000466258.1 ENST00000494111.1 |
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| CDS GCA 90 bp | ACAGGCAGTGACAAGTCCCGAGGAGGGCCTCGGTCCCTCCTGTCGTaGAGGGAGTTCTGCTCCTGGAAATATTCCTCCTCTTCATCGAAG | + |
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Preference number: 5 (lower is better) Translates to: TGSDKSRGGPRSLLS*REFCSWKYSSSSSK Trigger: CTTCGATGAAGAGGAGGAATATTTCCAGGAGCAGAACTCCCTGCACGACAGGAGGGACCGAGGCCCTCCTCGGGACTTGTCACTGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000366654.5 ENST00000466258.1 ENST00000494111.1 |
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| CDS GCA 90 bp | CTCTCCGAGCAGAAGCAGCCTGGATCTCAACGGTGTGTTCTCGCATaGCCTTGGAGGACGGCTGGTCTCCACATTCACAGCTGGATTCAG | + |
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Preference number: 5 (lower is better) Translates to: LSEQKQPGSQRCVLA*PWRTAGLHIHSWIQ Trigger: CTGAATCCAGCTGTGAATGTGGAGACCAGCCGTCCTCCAAGGGCATGCGAGAACACACCGTTGAGATCCAGGCTGCTTCTGCTCGGAGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466258.1 |
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| CDS CCA 90 bp | CTTCATCGAAGAAGCCGTTCTCCAGAGCGTAAGTGCAGTCTGGGCTaGAGGCTGCCTGGCATGCCCCCTTGTACTCCTGAATCGACTCGT | + |
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Preference number: 5 (lower is better) Translates to: LHRRSRSPERKCSLG*RLPGMPPCTPESTR Trigger: ACGAGTCGATTCAGGAGTACAAGGGGGCATGCCAGGCAGCCTCCAGCCCAGACTGCACTTACGCTCTGGAGAACGGCTTCTTCGATGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000366654.5 ENST00000466258.1 ENST00000494111.1 |
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| CDS CCA 90 bp | CTCCTCTTCATCGAAGAAGCCGTTCTCCAGAGCGTAAGTGCAGTCTaGGCTGGAGGCTGCCTGGCATGCCCCCTTGTACTCCTGAATCGA | + |
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Preference number: 5 (lower is better) Translates to: LLFIEEAVLQSVSAV*AGGCLACPLVLLNR Trigger: TCGATTCAGGAGTACAAGGGGGCATGCCAGGCAGCCTCCAGCCCAGACTGCACTTACGCTCTGGAGAACGGCTTCTTCGATGAAGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000366654.5 ENST00000466258.1 ENST00000494111.1 |
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| CDS-3UTR CAA 90 bp | ACCCTAACACAAAGAGGATTGGAATACTCTACCATCTGTAAGGAAGTAGCTAGCGCCCGCTCAAGCTCTTaGGCAGCGGGGGCAGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: TLTQRGLEYSTICKEVASARSSS*AAGAAR Trigger: ACGGGCTGCCCCCGCTGCCAAAGAGCTTGAGCGGGC...GCTAGCTACTTCCTTACAGATGGTAGAGTATTCCAATCCTCTTTGTGTTAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS GCA 90 bp | ACTTACTCCTGTTTTCCAGGATTCCTCTGCAGAATTGCATCTGGATaGCATCAACATGCCCCCAGGAGTCTGACTCGGCCAGCTCTGACG | + |
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Preference number: 5 (lower is better) Translates to: TYSCFPGFLCRIASG*HQHAPRSLTRPALT Trigger: CGTCAGAGCTGGCCGAGTCAGACTCCTGGGGGCATGTTGATGGCATCCAGATGCAATTCTGCAGAGGAATCCTGGAAAACAGGAGTAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494111.1 |
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| CDS CCA 90 bp | GAGCAGAAGCAGCCTGGATCTCAACGGTGTGTTCTCGCATGCCCTTaGAGGACGGCTGGTCTCCACATTCACAGCTGGATTCAGAAAATA | + |
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Preference number: 5 (lower is better) Translates to: EQKQPGSQRCVLACP*RTAGLHIHSWIQKI Trigger: TATTTTCTGAATCCAGCTGTGAATGTGGAGACCAGCCGTCCTCCAAGGGCATGCGAGAACACACCGTTGAGATCCAGGCTGCTTCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466258.1 |
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| CDS GCA 90 bp | TTTTCCAGGATTCCTCTGCAGAATTGCATCTGGATGCCATCAACATaGCCCCAGGAGTCTGACTCGGCCAGCTCTGACGTCCCTATCTTT | + |
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Preference number: 5 (lower is better) Translates to: FSRIPLQNCIWMPST*PQESDSASSDVPIF Trigger: AAAGATAGGGACGTCAGAGCTGGCCGAGTCAGACTCCTGGGGGCATGTTGATGGCATCCAGATGCAATTCTGCAGAGGAATCCTGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494111.1 |
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| CDS CCA 90 bp | GCCTGGATCTCAACGGTGTGTTCTCGCATGCCCTTGGAGGACGGCTaGTCTCCACATTCACAGCTGGATTCAGAAAATACAGCTCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: AWISTVCSRMPLEDG*SPHSQLDSENTALF Trigger: AAAGAGAGCTGTATTTTCTGAATCCAGCTGTGAATGTGGAGACCAGCCGTCCTCCAAGGGCATGCGAGAACACACCGTTGAGATCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466258.1 |
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| CDS CCA 90 bp | CTAGACTTACTCCTGTTTTCCAGGATTCCTCTGCAGAATTGCATCTaGATGCCATCAACATGCCCCCAGGAGTCTGACTCGGCCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LDLLLFSRIPLQNCI*MPSTCPQESDSASS Trigger: AGAGCTGGCCGAGTCAGACTCCTGGGGGCATGTTGATGGCATCCAGATGCAATTCTGCAGAGGAATCCTGGAAAACAGGAGTAAGTCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494111.1 |
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| CDS-3UTR CAA 90 bp | AAACTGGTAGCGCTCATCCCCTGTGCCCGAGGACCGTCCACAACGGAGGTGCTTCTAACACAAAGAGGATaGGAATACTCTACCATCTGT | + |
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Preference number: 5 (lower is better) Translates to: KLVALIPCARGPSTTEVLLTQRG*EYSTIC Trigger: ACAGATGGTAGAGTATTCCAATCCTCTTTGTGTTAG...AAGCACCTCCGTTGTGGACGGTCCTCGGGCACAGGGGATGAGCGCTACCAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS GCA 90 bp | AGATCTTGGCTCCGCCACTCACCAGCTGAGAAACTGTGGATAAATTaGTCAGCTCAAACCCCAAAAGGAGGACCTTCCAAACCACTGCAC | + |
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Preference number: 5 (lower is better) Translates to: RSWLRHSPAEKLWIN*SAQTPKGGPSKPLH Trigger: GTGCAGTGGTTTGGAAGGTCCTCCTTTTGGGGTTTGAGCTGAGCAATTTATCCACAGTTTCTCAGCTGGTGAGTGGCGGAGCCAAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494111.1 |
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| CDS-3UTR CAA 90 bp | AATGAAAACATTTGCCATCTTACAGTGAGTGATACATCACATTGGCTTGCCCCAAGACCAACCATCTCTTaGCGGAGCAGCGCCAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: NENICHLTVSDTSHWLAPRPTIS*RSSARA Trigger: CGCTCTGGCGCTGCTCCGCAAAGAGATGGTTGGTCT...TGGGGCAAGCCAATGTGATGTATCACTCACTGTAAGATGGCAAATGTTTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS CCA 90 bp | AAAGCCACACTCTCTCGGGGTCACATAGTATGTGCTCAAAAACCATaGAAGAAGATCATCTGGAATCCTAGATCTACTCTCCTGCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: KATLSRGHIVCAQKP*KKIIWNPRSTLLLS Trigger: ACTCAGCAGGAGAGTAGATCTAGGATTCCAGATGATCTTCTTCCATGGTTTTTGAGCACATACTATGTGACCCCGAGAGAGTGTGGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494111.1 |
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| CDS-3UTR CAA 90 bp | TTTTCAGTAAAAAGCTTTCACCGAATCACTGGGCAGTTAGTAATGCAGCTTACAGTAGAGGCTGTACAGTaGGCAGAGCAAGGACATGTC | + |
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Preference number: 5 (lower is better) Translates to: FSVKSFHRITGQLVMQLTVEAVQ*AEQGHV Trigger: GACATGTCCTTGCTCTGCCAACTGTACAGCCTCTAC...TGTAAGCTGCATTACTAACTGCCCAGTGATTCGGTGAAAGCTTTTTACTGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CAA 90 bp | AATGAAAACATTTGCCATCTTACAGTGAGTGATACATCACATTGGCTTGCCCCAAAGGTAATTACTGGTTaGAGTGGCGGGTGGTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: NENICHLTVSDTSHWLAPKVITG*SGGWFA Trigger: AGCAAACCACCCGCCACTCAAACCAGTAATTACCTT...TGGGGCAAGCCAATGTGATGTATCACTCACTGTAAGATGGCAAATGTTTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CAA 90 bp | TCAACATGTCTTCGTATTATCTTCCTTCCTCTCGTATCTGATAGACAAAGAATGAACGGAGGTGCTTTCTaGCAAGAGAAGCAGCAAATG | + |
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Preference number: 5 (lower is better) Translates to: STCLRIIFLPLVSDRQRMNGGAF*QEKQQM Trigger: CATTTGCTGCTTCTCTTGCAAGAAAGCACCTCCGTT...CATTCTTTGTCTATCAGATACGAGAGGAAGGAAGATAATACGAAGACATGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS-3UTR CAA 90 bp | GCAAGAACCCTAACACAAAGAGGATTGGAATACTCTACCATCTGTAAGGAAGTAATACATCACATTGGCTaGCCCCAGTTTTTGTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: ARTLTQRGLEYSTICKEVIHHIG*PQFLCS Trigger: AGAACACAAAAACTGGGGCAAGCCAATGTGATGTAT...TACTTCCTTACAGATGGTAGAGTATTCCAATCCTCTTTGTGTTAGGGTTCTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS GCA 72 bp | TGGATGCGCGACTTCTGCGCGTACAGCCGCTCCAGGTaGCGCCAGCCCCCAGACGCGCCGCCGCCCGACGCC | + |
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Preference number: 6 (lower is better) Translates to: WMRDFCAYSRSR*RQPPDAPPPDA Trigger: GGCGTCGGGCGGCGGCGCGTCTGGGGGCTGGCGGCACCTGGAGCGGCTGTACGCGCAGAAGTCGCGCATCCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS CAA 72 bp | CGCCCGACGCCGAGTGCAGCAGCCCGCTCAAGCTCTTaGGCAGCGGGGGCAGCCCGTCCACCCGCAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: RPTPSAAARSSS*AAGAARPPAAP Trigger: GGGGGCTGCGGGTGGACGGGCTGCCCCCGCTGCCAAAGAGCTTGAGCGGGCTGCTGCACTCGGCGTCGGGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366654.5 |
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| CDS CCA 72 bp | TCCAGCTGGCGGAGACCAACCCTTCCAGAAAAAGAGTaGCTGGGGAGCCGCCGAGCAAGCCACTCTCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: SSWRRPTLPEKE*LGSRRASHSPS Trigger: GCTCGGAGAGTGGCTTGCTCGGCGGCTCCCCAGCCACTCTTTTTCTGGAAGGGTTGGTCTCCGCCAGCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466258.1 |
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| CDS GCA 72 bp | GCAAGGACATGTCCAGCTGGCGGAGACCAACCTCCCTaGCTGGGTTCAGATCTTGGCTCCGCCACTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: ARTCPAGGDQPP*LGSDLGSATHQ Trigger: CTGGTGAGTGGCGGAGCCAAGATCTGAACCCAGGCAGGGAGGTTGGTCTCCGCCAGCTGGACATGTCCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494111.1 |
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| CDS GCA 72 bp | GTTCTCCAGAGCGTAAGTGCAGTCTGGGCTGGAGGCTaGCTGGCATGCCCCCTTGTACTCCTGAATCGACTC | + |
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Preference number: 6 (lower is better) Translates to: VLQSVSAVWAGG*LACPLVLLNRL Trigger: GAGTCGATTCAGGAGTACAAGGGGGCATGCCAGGCAGCCTCCAGCCCAGACTGCACTTACGCTCTGGAGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000366654.5 ENST00000466258.1 ENST00000494111.1 |
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| CDS GCA 72 bp | GACAAGTCCCGAGGAGGGCCTCGGTCCCTCCTGTCGTaGAGGGAGTTCTGCTCCTGGAAATATTCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: DKSRGGPRSLLS*REFCSWKYSSS Trigger: AGAGGAGGAATATTTCCAGGAGCAGAACTCCCTGCACGACAGGAGGGACCGAGGCCCTCCTCGGGACTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000366654.5 ENST00000466258.1 ENST00000494111.1 |
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| CDS CCA 72 bp | AGAAGCCGTTCTCCAGAGCGTAAGTGCAGTCTGGGCTaGAGGCTGCCTGGCATGCCCCCTTGTACTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RSRSPERKCSLG*RLPGMPPCTPE Trigger: TTCAGGAGTACAAGGGGGCATGCCAGGCAGCCTCCAGCCCAGACTGCACTTACGCTCTGGAGAACGGCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000366654.5 ENST00000466258.1 ENST00000494111.1 |
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| CDS CCA 72 bp | ATCGAAGAAGCCGTTCTCCAGAGCGTAAGTGCAGTCTaGGCTGGAGGCTGCCTGGCATGCCCCCTTGTACTC | + |
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Preference number: 6 (lower is better) Translates to: IEEAVLQSVSAV*AGGCLACPLVL Trigger: GAGTACAAGGGGGCATGCCAGGCAGCCTCCAGCCCAGACTGCACTTACGCTCTGGAGAACGGCTTCTTCGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000366654.5 ENST00000466258.1 ENST00000494111.1 |
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| CDS GCA 72 bp | CAGAAGCAGCCTGGATCTCAACGGTGTGTTCTCGCATaGCCTTGGAGGACGGCTGGTCTCCACATTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: QKQPGSQRCVLA*PWRTAGLHIHS Trigger: GCTGTGAATGTGGAGACCAGCCGTCCTCCAAGGGCATGCGAGAACACACCGTTGAGATCCAGGCTGCTTCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466258.1 |
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| CDS CAA 72 bp | GCAGCCTGGATCTCAACGGTGTGTTCTCGCATGCCCTaGGAGGACGGCTGGTCTCCACATTCACAGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: AAWISTVCSRMP*EDGWSPHSQLD Trigger: ATCCAGCTGTGAATGTGGAGACCAGCCGTCCTCCAAGGGCATGCGAGAACACACCGTTGAGATCCAGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466258.1 |
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| CDS CCA 72 bp | CAGCCTGGATCTCAACGGTGTGTTCTCGCATGCCCTTaGAGGACGGCTGGTCTCCACATTCACAGCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: QPGSQRCVLACP*RTAGLHIHSWI Trigger: AATCCAGCTGTGAATGTGGAGACCAGCCGTCCTCCAAGGGCATGCGAGAACACACCGTTGAGATCCAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466258.1 |
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| CDS CAA 90 bp | CGAGCAGAAGCAGCCTGGATCTCAACGGTGTGTTCTCGCATGCCCTaGGAGGACGGCTGGTCTCCACATTCACAGCTGGATTCAGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: RAEAAWISTVCSRMP*EDGWSPHSQLDSEN Trigger: ATTTTCTGAATCCAGCTGTGAATGTGGAGACCAGCCGTCCTCCAAGGGCATGCGAGAACACACCGTTGAGATCCAGGCTGCTTCTGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466258.1 |
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| CDS CCA 72 bp | TCAACGGTGTGTTCTCGCATGCCCTTGGAGGACGGCTaGTCTCCACATTCACAGCTGGATTCAGAAAATACA | + |
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Preference number: 6 (lower is better) Translates to: STVCSRMPLEDG*SPHSQLDSENT Trigger: TGTATTTTCTGAATCCAGCTGTGAATGTGGAGACCAGCCGTCCTCCAAGGGCATGCGAGAACACACCGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466258.1 |
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| CDS CCA 72 bp | TACGATTATTTTATACAAAGTCAAAGCCTCCCAGCCTaGAGGCCCCACAGAGCCCTTGATGCTGGGTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: YDYFIQSQSLPA*RPHRALDAGCD Trigger: GTCACACCCAGCATCAAGGGCTCTGTGGGGCCTCCAGGCTGGGAGGCTTTGACTTTGTATAAAATAATCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494111.1 |
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| CDS CAA 72 bp | AGACTTACTCCTGTTTTCCAGGATTCCTCTGCAGAATaGCATCTGGATGCCATCAACATGCCCCCAGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: RLTPVFQDSSAE*HLDAINMPPGV Trigger: GACTCCTGGGGGCATGTTGATGGCATCCAGATGCAATTCTGCAGAGGAATCCTGGAAAACAGGAGTAAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494111.1 |
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| CDS GCA 72 bp | CGAGAAAGCCACACTCTCTCGGGGTCACATAGTATGTaGTCAAAAACCATGGAAGAAGATCATCTGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: RESHTLSGSHSM*SKTMEEDHLES Trigger: GGATTCCAGATGATCTTCTTCCATGGTTTTTGAGCACATACTATGTGACCCCGAGAGAGTGTGGCTTTCTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494111.1 |
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| CDS GCA 72 bp | AAAATGCAGACAGGCTCATTTAAGAAAAACATGGAATaGTCAAACCCTGCAATTTGTGGTCCCTTATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KMQTGSFKKNME*SNPAICGPLFS Trigger: GGAGAATAAGGGACCACAAATTGCAGGGTTTGAGCATTCCATGTTTTTCTTAAATGAGCCTGTCTGCATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466258.1 |
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