RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM83D (Homo sapiens)

Ensembl gene IDs: ENSG00000101447

Ensembl transcript IDs: ENST00000619304.4, ENST00000619850.2

Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCTGCCAACATATACGTaGTCTGTCATTGACCAAAAC +
Preference number: 2 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNLPTYT*SVIDQN
Trigger: GTTTTGGTCAATGACAGACCACGTATATGTTGGCAG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
3UTR-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTACGTGGTCTGTCATTaGCCAAAACATCATTATGTA +
Preference number: 2 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNYVVCH*PKHHYV
Trigger: TACATAATGATGTTTTGGTCAATGACAGACCACGTA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
3UTR-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACAAAGACAACAAAGGTaGCAAAGTCAGGTAAAAGAA +
Preference number: 2 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRQRQQR*QSQVKE
Trigger: TTCTTTTACCTGACTTTGTCACCTTTGTTGTCTTTG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
3UTR-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATACGTGGTCTGTCATTaGCCAAAACATCATTATGTA +
Preference number: 2 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRYVVCH*PKHHYV
Trigger: TACATAATGATGTTTTGGTCAATGACAGACCACGTA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
3UTR-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACATACGTGGTCTGTCATaGACCAAAACATCATTATGT +
Preference number: 3 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNIRGLS*TKTSLC
Trigger: ACATAATGATGTTTTGGTCAATGACAGACCACGTAT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
3UTR-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAATACGTGGTCTGTCATaGACCAAAACATCATTATGT +
Preference number: 3 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRIRGLS*TKTSLC
Trigger: ACATAATGATGTTTTGGTCAATGACAGACCACGTAT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGCGTCTCGACACGCGTaGCGCCGCGGTAGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNASRHA*RRGRRP
Trigger: AGGGCGCCTACCGCGGCGCCACGCGTGTCGAGACGC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACACAGGCCCGCGCCATTaGCCGCACCTCCCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNTGPRH*PHLPAS
Trigger: CGAGGCGGGGAGGTGCGGCCAATGGCGCGGGCCTGT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619304.4
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCCAGCGCCGCGGGGCTaGAAGTGCGTCTCGACACGC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNPAPRG*KCVSTR
Trigger: GCGTGTCGAGACGCACTTCCAGCCCCGCGGCGCTGG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGGCGCCGTGACTCGCTaGACAGCTCGGTCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNGAVTR*TARSGW
Trigger: CCAACCCGACCGAGCTGTTCAGCGAGTCACGGCGCC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCCGCCGCGCGCAGAATaGCGTGCACCTCATCGGGGT +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNPPRAE*RAPHRG
Trigger: ACCCCGATGAGGTGCACGCCATTCTGCGCGCGGCGG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCAGAGCCAGGCGCCGTaGCTCGCTGAACAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNQSQAP*LAEQLG
Trigger: ACCGAGCTGTTCAGCGAGTCACGGCGCCTGGCTCTG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGCTCGGGGAAGTAGGTaGCCGAAGAGCAGTCGTGCG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNARGSR*PKSSRA
Trigger: CGCACGACTGCTCTTCGGGCACCTACTTCCCCGAGC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACCGCGGGGCTGGAAGTaGGTCTCGACACGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRPRGWK*VSTRVA
Trigger: CGCCACGCGTGTCGAGACGCACTTCCAGCCCCGCGG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACATGGGGCTTGCGCTCTaGCTTGCCCTCTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNMGLAL*LALCGH
Trigger: ATGCCCGCAGAGGGCAAGGCAGAGCGCAAGCCCCAT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAACAGCTCGGTCGGGTTaGGCGGCCCGCACGGCGACA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRTARSG*AARTAT
Trigger: TGTCGCCGTGCGGGCCGCCCAACCCGACCGAGCTGT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACCAGCGCCGCGGGGCTaGAAGTGCGTCTCGACACGC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRPAPRG*KCVSTR
Trigger: GCGTGTCGAGACGCACTTCCAGCCCCGCGGCGCTGG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGCCGAGCGGAGCTGCTaGCGCAGAGCGTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRAERSC*RRASLQ
Trigger: CTGCAAGGACGCTCTGCGCCAGCAGCTCCGCTCGGC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACAGAGCCAGGCGCCGTaGCTCGCTGAACAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRQSQAP*LAEQLG
Trigger: ACCGAGCTGTTCAGCGAGTCACGGCGCCTGGCTCTG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACACAGGAGTTTGGGGCTaGTGGGCTTGGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNTGVWG*WAWTGH
Trigger: ATGCCCAGTCCAAGCCCATCAGCCCCAAACTCCTGT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTCTCCTGGCTCTGTTTaGGTGGCAGCGTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNSPGSV*VAASMA
Trigger: GGCCATTGACGCTGCCACTCAAACAGAGCCAGGAGA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGGCGCAGAGCGTCCTTaGAGCCGTAGGGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRGAERP*SRRGHL
Trigger: AAGGTGGCCCCTACGGCTGCAAGGACGCTCTGCGCC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCACGTCCATGACCACTaGAATCACCTCTCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNHVHDH*NHLSRR
Trigger: TCGGCGCGAGAGGTGATTGCAGTGGTCATGGACGTG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACGGACAGCAGAGCCATaGCGGCGCTCGGACTCGACA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRRTAEP*RRSDST
Trigger: TGTCGAGTCCGAGCGCCGCCATGGCTCTGCTGTCCG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGAGGACTCACAGTCATaGGGCTTGCGCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNEDSQS*GLRSAL
Trigger: CAAGGCAGAGCGCAAGCCCCATGACTGTGAGTCCTC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACATGGCCTTTCTGCTCTaGAGCTCGTCCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNMAFLL*SSSLWL
Trigger: CAGCCACAGGGACGAGCTCCAGAGCAGAAAGGCCAT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACACTCACACTCAGCCCTaGCATCTCCTCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNTHTQP*HLLSWL
Trigger: GAGCCAGGAGAGGAGATGCCAGGGCTGAGTGTGAGT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGGAAGTCAGTGGTTCTaGTGGAAGCGGGAGAACCAG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNGSQWF*WKRENQ
Trigger: CTGGTTCTCCCGCTTCCATCAGAACCACTGACTTCC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGCGCGCAGAATGGCGTaGACCTCATCGGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRARRMA*TSSGFR
Trigger: CCTGAACCCCGATGAGGTGCACGCCATTCTGCGCGC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACCCGAAGAGCAGTCGTaGGAGGAGCCGAACGAGTCC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRPEEQS*EEPNES
Trigger: GGACTCGTTCGGCTCCTCGCACGACTGCTCTTCGGG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGCTCGGGGAAGTAGGTaGCCGAAGAGCAGTCGTGCG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRARGSR*PKSSRA
Trigger: CGCACGACTGCTCTTCGGGCACCTACTTCCCCGAGC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGCTTGCGCTCTGCCTTaGCCTCTGCGGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRACALP*PLRASL
Trigger: CAGAGATGCCCGCAGAGGGCAAGGCAGAGCGCAAGC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAATGGGGCTTGCGCTCTaGCTTGCCCTCTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRMGLAL*LALCGH
Trigger: ATGCCCGCAGAGGGCAAGGCAGAGCGCAAGCCCCAT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCGTCAATGGCCTTTCTaGTCTGGAGCTCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNRQWPF*SGARPC
Trigger: ACAGGGACGAGCTCCAGAGCAGAAAGGCCATTGACG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTGGCATCTCCTCTCCTaGCTCTGTTTGAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNWHLLS*LCLSGS
Trigger: GCTGCCACTCAAACAGAGCCAGGAGAGGAGATGCCA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACAAGCGGGAGAACCAGTaGAGCTTGCCACAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNKRENQ*SLPQSL
Trigger: AAGGCTCTGTGGCAAGCTCCACTGGTTCTCCCGCTT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGGGTGCCCAGGTACTTaGGATAGCCAGGATTGTGGA +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNGCPGT*DSQDCG
Trigger: TCCACAATCCTGGCTATCCCAAGTACCTGGGCACCC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACAAGTACAGTTCCAGGTaGGGGGTGCCCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNKYSSR*GVPRYL
Trigger: CAAGTACCTGGGCACCCCCCACCTGGAACTGTACTT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGCAGGTTGCCCAGGGTaGGCTCCTTGGACTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRAGCPG*APWTVV
Trigger: AACCACAGTCCAAGGAGCTCACCCTGGGCAACCTGC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCAGCACATGCTGTGGTaGTGCTGGTTTGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNQHMLW*CWFVFP
Trigger: TGGGAACACAAACCAGCATCACCACAGCATGTGCTG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACACTGTAGGAGCCTGTTaGCACGCGGATGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNTVGAC*HADAIN
Trigger: ATTGATGGCATCCGCGTGGCAACAGGCTCCTACAGT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCTGGGTACCAGCACATaGTGTGGTGATGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNLGTST*CGDAGL
Trigger: CAAACCAGCATCACCACAGCATGTGCTGGTACCCAG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACAGAACCAGTGGAGCTTaGCACAGAGCCTTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNRTSGA*HRALGR
Trigger: TCTTCCCAAGGCTCTGTGGCAAGCTCCACTGGTTCT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAAAGCTCCAACAGCGGTaGCTCCAGGTCCGACTGCTC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRKLQQR*LQVRLL
Trigger: GAGCAGTCGGACCTGGAGCCACCGCTGTTGGAGCTT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCTGATGGGCTTGGACTaGGCATACAGGATTCGGAAC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNLMGLD*AYRIRN
Trigger: GTTCCGAATCCTGTATGCCCAGTCCAAGCCCATCAG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCTGGCTCTGTTTGAGTaGCAGCGTCAATGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNLALFE*QRQWPF
Trigger: GAAAGGCCATTGACGCTGCCACTCAAACAGAGCCAG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACAGCATAGCCAGCATGTaGTTGAGCCGGGACCTGATA +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNSIASM*LSRDLI
Trigger: TATCAGGTCCCGGCTCAACCACATGCTGGCTATGCT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACTTCCTGGGAGTACTTaGCAGCCTAGCCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRLPGST*QPSQPH
Trigger: ATGCGGCTGGCTAGGCTGTCAAGTACTCCCAGGAAG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGACCAAATCGTGGTTTaGGAGCTTGCTATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNDQIVV*ELAILV
Trigger: CACCAGGATAGCAAGCTCTCAAACCACGATTTGGTC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTCATCCATGTCAGTCTaGGTAGTGGTCGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNSSMSV*VVVDLD
Trigger: GTCCAGATCGACCACTACTCAGACTGACATGGATGA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACACGTCCATGACCACTaGAATCACCTCTCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRHVHDH*NHLSRR
Trigger: TCGGCGCGAGAGGTGATTGCAGTGGTCATGGACGTG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTATCCTGGTGATGACTaGAGTCTGGGTACCAGCACA +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNYPGDD*SLGTST
Trigger: TGTGCTGGTACCCAGACTGCAGTCATCACCAGGATA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCGTGGTTTGAGAGCTTaGTATCCTGGTGATGACTGC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNRGLRA*YPGDDC
Trigger: GCAGTCATCACCAGGATAGCAAGCTCTCAAACCACG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGAGGACTCACAGTCATaGGGCTTGCGCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHREDSQS*GLRSAL
Trigger: CAAGGCAGAGCGCAAGCCCCATGACTGTGAGTCCTC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAATGGCCTTTCTGCTCTaGAGCTCGTCCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRMAFLL*SSSLWL
Trigger: CAGCCACAGGGACGAGCTCCAGAGCAGAAAGGCCAT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAACTCACACTCAGCCCTaGCATCTCCTCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRTHTQP*HLLSWL
Trigger: GAGCCAGGAGAGGAGATGCCAGGGCTGAGTGTGAGT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTTTCGGTTGGTGAGGTaGTCAAACTTGTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNFRLVR*SNLLLL
Trigger: GAGCAGCAACAAGTTTGATCACCTCACCAACCGAAA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGTGGTTTTCGGTTGGTaGGGTGATCAAACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNVVFGW*GDQTCC
Trigger: GCAACAAGTTTGATCACCTCACCAACCGAAAACCAC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGGAAGTCAGTGGTTCTaGTGGAAGCGGGAGAACCAG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRGSQWF*WKRENQ
Trigger: CTGGTTCTCCCGCTTCCATCAGAACCACTGACTTCC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACGTCAATGGCCTTTCTaGTCTGGAGCTCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRRQWPF*SGARPC
Trigger: ACAGGGACGAGCTCCAGAGCAGAAAGGCCATTGACG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATGGCATCTCCTCTCCTaGCTCTGTTTGAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRWHLLS*LCLSGS
Trigger: GCTGCCACTCAAACAGAGCCAGGAGAGGAGATGCCA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAAAGCGGGAGAACCAGTaGAGCTTGCCACAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRKRENQ*SLPQSL
Trigger: AAGGCTCTGTGGCAAGCTCCACTGGTTCTCCCGCTT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGGGTGCCCAGGTACTTaGGATAGCCAGGATTGTGGA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRGCPGT*DSQDCG
Trigger: TCCACAATCCTGGCTATCCCAAGTACCTGGGCACCC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAAAGTACAGTTCCAGGTaGGGGGTGCCCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRKYSSR*GVPRYL
Trigger: CAAGTACCTGGGCACCCCCCACCTGGAACTGTACTT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTGCCATCAATCAACGTaGACTTTTCGTGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNCHQST*TFREPS
Trigger: GGAAGGTTCACGAAAAGTTCACGTTGATTGATGGCA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACAGCACATGCTGTGGTaGTGCTGGTTTGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRQHMLW*CWFVFP
Trigger: TGGGAACACAAACCAGCATCACCACAGCATGTGCTG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCAACTCCCTGTTTCCTaGATATTTCTTGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNQLPVS*IFLAGL
Trigger: GAGACCTGCAAGAAATATGCAGGAAACAGGGAGTTG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAACTGTAGGAGCCTGTTaGCACGCGGATGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRTVGAC*HADAIN
Trigger: ATTGATGGCATCCGCGTGGCAACAGGCTCCTACAGT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGATCAAACTTGTTGCTaGTCTGGAAGTGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNDQTCC*SGSETG
Trigger: TCCTGTCTCACTTCCAGAGCAGCAACAAGTTTGATC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACTGGGTACCAGCACATaGTGTGGTGATGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRLGTST*CGDAGL
Trigger: CAAACCAGCATCACCACAGCATGTGCTGGTACCCAG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAAGAACCAGTGGAGCTTaGCACAGAGCCTTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRRTSGA*HRALGR
Trigger: TCTTCCCAAGGCTCTGTGGCAAGCTCCACTGGTTCT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCCAGCGAAGTGGAATTaGCGCTCTTTGTTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNPAKWN*RSLFKF
Trigger: AAACTTGAACAAAGAGCGGCAATTCCACTTCGCTGG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACTGATGGGCTTGGACTaGGCATACAGGATTCGGAAC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRLMGLD*AYRIRN
Trigger: GTTCCGAATCCTGTATGCCCAGTCCAAGCCCATCAG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGAGCTCCTTGGACTGTaGTTTTCGGTTGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRELLGL*FSVGEV
Trigger: CACCTCACCAACCGAAAACCACAGTCCAAGGAGCTC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACTGGCTCTGTTTGAGTaGCAGCGTCAATGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRLALFE*QRQWPF
Trigger: GAAAGGCCATTGACGCTGCCACTCAAACAGAGCCAG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACACATATCCAGAAATTaGGAGAGGAGAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRHISRN*ERRAWS
Trigger: GGACCAGGCTCTCCTCTCTCAATTTCTGGATATGTG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATCATCCATGTCAGTCTaGGTAGTGGTCGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRSSMSV*VVVDLD
Trigger: GTCCAGATCGACCACTACTCAGACTGACATGGATGA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATTTATAGGCAACCTTTaGATCAAACAGGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRFIGNL*IKQARA
Trigger: GGCGCGGGCCTGTTTGATTCAAAGGTTGCCTATAAA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619304.4
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATATCCTGGTGATGACTaGAGTCTGGGTACCAGCACA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRYPGDD*SLGTST
Trigger: TGTGCTGGTACCCAGACTGCAGTCATCACCAGGATA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACGTGGTTTGAGAGCTTaGTATCCTGGTGATGACTGC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRRGLRA*YPGDDC
Trigger: GCAGTCATCACCAGGATAGCAAGCTCTCAAACCACG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGTGGTTTTCGGTTGGTaGGGTGATCAAACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRVVFGW*GDQTCC
Trigger: GCAACAAGTTTGATCACCTCACCAACCGAAAACCAC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGACCCTTCTGTAGATTaGGTTCCTCGAGGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRDPSVD*VPRGKR
Trigger: TCTCTTTCCTCGAGGAACTCAATCTACAGAAGGGTC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGTTCAAGTTTCTAAGTaGGTCACTCAAGTACAGTTC +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNVQVSK*VTQVQF
Trigger: GAACTGTACTTGAGTGACTCACTTAGAAACTTGAAC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACAGGAAGACTTCAAACTaGAAGATCTCGATACAGACA +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNRKTSN*KISIQT
Trigger: TGTCTGTATCGAGATCTTCCAGTTTGAAGTCTTCCT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACAACGTGAACTTTTCGTaGACCTTCCCAATAATCTTA +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNNVNFS*TFPIIL
Trigger: TAAGATTATTGGGAAGGTTCACGAAAAGTTCACGTT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATGCCATCAATCAACGTaGACTTTTCGTGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRCHQST*TFREPS
Trigger: GGAAGGTTCACGAAAAGTTCACGTTGATTGATGGCA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACTGAAATTGCCAGAATaGAGGCCAAGGTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRLKLPE*RPRWFS
Trigger: TGAAAACCACCTTGGCCTTCATTCTGGCAATTTCAG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCAAAGACAACAAAGGTaGCAAAGTCAGGTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNQRQQR*QSQVKE
Trigger: TTCTTTTACCTGACTTTGTCACCTTTGTTGTCTTTG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACAACTCCCTGTTTCCTaGATATTTCTTGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRQLPVS*IFLAGL
Trigger: GAGACCTGCAAGAAATATGCAGGAAACAGGGAGTTG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGAACTTTCAGATCCATaGACATATCCAGAAATTGAG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNELSDP*TYPEIE
Trigger: CTCAATTTCTGGATATGTGCATGGATCTGAAAGTTC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGAATTACCAAGTTACTaGTGTTTAATTTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNELPSY*CLICHP
Trigger: CGGATGGCAAATTAAACAGCAGTAACTTGGTAATTC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGATCAAACTTGTTGCTaGTCTGGAAGTGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRDQTCC*SGSETG
Trigger: TCCTGTCTCACTTCCAGAGCAGCAACAAGTTTGATC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACCAGCGAAGTGGAATTaGCGCTCTTTGTTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRPAKWN*RSLFKF
Trigger: AAACTTGAACAAAGAGCGGCAATTCCACTTCGCTGG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACATAGGAAGGATAAAGTaGTACATCTCTAACAGCAAG +
Preference number: 4 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNIGRIK*YISNSK
Trigger: CTTGCTGTTAGAGATGTAGCACTTTATCCTTCCTAT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAATCTGGACCAAATCGTaGTTTGAGAGCTTGCTATCC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRIWTKS*FESLLS
Trigger: GGATAGCAAGCTCTCAAACCACGATTTGGTCCAGAT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR TCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATTTTCCTGTTCAGGATaGACTTTCAGATCCATGCAC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRFSCSG*TFRSMH
Trigger: GTGCATGGATCTGAAAGTTCATCCTGAACAGGAAAA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATTCCTGCATATTTCTTaGAGGTCTCTGAAGATGTCG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRFLHIS*RSLKMS
Trigger: CGACATCTTCAGAGACCTGCAAGAAATATGCAGGAA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACTGCCAACATATACGTaGTCTGTCATTGACCAAAAC +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRLPTYT*SVIDQN
Trigger: GTTTTGGTCAATGACAGACCACGTATATGTTGGCAG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAAGGAAGACTTCAAACTaGAAGATCTCGATACAGACA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRRKTSN*KISIQT
Trigger: TGTCTGTATCGAGATCTTCCAGTTTGAAGTCTTCCT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGAACTTTCAGATCCATaGACATATCCAGAAATTGAG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRELSDP*TYPEIE
Trigger: CTCAATTTCTGGATATGTGCATGGATCTGAAAGTTC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAATAGGAAGGATAAAGTaGTACATCTCTAACAGCAAG +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRIGRIK*YISNSK
Trigger: CTTGCTGTTAGAGATGTAGCACTTTATCCTTCCTAT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR GCA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATGTACATCATGTTACTaGACTGAATACTGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRCTSCY*TEYCRQ
Trigger: TTGCCTACAGTATTCAGTGCAGTAACATGATGTACA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS TCA 90 bp GGCCGCCCGCCACCAGCTCCTCCAGAGCCAGGCGCCGTGACTCGCTaGACAGCTCGGTCGGGTTGGGCGGCCCGCACGGCGACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GRPPPAPPEPGAVTR*TARSGWAARTATGR
Trigger: CCTGCCTGTCGCCGTGCGGGCCGCCCAACCCGACCGAGCTGTTCAGCGAGTCACGGCGCCTGGCTCTGGAGGAGCTGGTGGCGGGCGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CCA 90 bp CACCTTCGCCAGCGCCGCGGGGCTGGAAGTGCGTCTCGACACGCGTaGCGCCGCGGTAGGCGCCCTGGTAGAAGGCGGGCCAGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: HLRQRRGAGSASRHA*RRGRRPGRRRASQA
Trigger: AGCTTGGCTGGCCCGCCTTCTACCAGGGCGCCTACCGCGGCGCCACGCGTGTCGAGACGCACTTCCAGCCCCGCGGCGCTGGCGAAGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CCA 90 bp GGCAGGCGGCGGGCACCTCGTCCAGGCCCTCGGACAGCAGAGCCATaGCGGCGCTCGGACTCGACAGCCCTCGGACAAAAACCGGCGTGC +
Preference number: 5 (lower is better)
Translates to: GRRRAPRPGPRTAEP*RRSDSTALGQKPAC
Trigger: GCACGCCGGTTTTTGTCCGAGGGCTGTCGAGTCCGAGCGCCGCCATGGCTCTGCTGTCCGAGGGCCTGGACGAGGTGCCCGCCGCCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619304.4
CDS GCA 90 bp GCTCCAACAGCGGTGGCTCCAGGTCCGACTGCTCGGGGAAGTAGGTaGCCGAAGAGCAGTCGTGCGAGGAGCCGAACGAGTCCTCGGCCG +
Preference number: 5 (lower is better)
Translates to: APTAVAPGPTARGSR*PKSSRARSRTSPRP
Trigger: CGGCCGAGGACTCGTTCGGCTCCTCGCACGACTGCTCTTCGGGCACCTACTTCCCCGAGCAGTCGGACCTGGAGCCACCGCTGTTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CCA 90 bp GTAGGCGCCCTGGTAGAAGGCGGGCCAGCCAAGCTCCAACAGCGGTaGCTCCAGGTCCGACTGCTCGGGGAAGTAGGTGCCCGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: VGALVEGGPAKLQQR*LQVRLLGEVGARRA
Trigger: TGCTCTTCGGGCACCTACTTCCCCGAGCAGTCGGACCTGGAGCCACCGCTGTTGGAGCTTGGCTGGCCCGCCTTCTACCAGGGCGCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS TCA 90 bp CTCTGCGGGCATCTCTGGGTCCAGGTCCGCCTTCCTGGGAGTACTTaGCAGCCTAGCCAGCCGCATCCGCAGCAGGTTGCCCAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: LCGHLWVQVRLPGST*QPSQPHPQQVAQGE
Trigger: CTCACCCTGGGCAACCTGCTGCGGATGCGGCTGGCTAGGCTGTCAAGTACTCCCAGGAAGGCGGACCTGGACCCAGAGATGCCCGCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS TCA 90 bp CCTCGGACAAAAACCGGCGTGCAGTCCCGCTTTATAGGCAACCTTTaGATCAAACAGGCCCGCGCCATTGGCCGCACCTCCCCGCCTCGG +
Preference number: 5 (lower is better)
Translates to: PRTKTGVQSRFIGNL*IKQARAIGRTSPPR
Trigger: CCGAGGCGGGGAGGTGCGGCCAATGGCGCGGGCCTGTTTGATTCAAAGGTTGCCTATAAAGCGGGACTGCACGCCGGTTTTTGTCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619304.4
CDS TCA 90 bp TGCCCAGGTACTTGGGATAGCCAGGATTGTGGAAGTCAGTGGTTCTaGTGGAAGCGGGAGAACCAGTGGAGCTTGCCACAGAGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: CPGTWDSQDCGSQWF*WKRENQWSLPQSLG
Trigger: CCCAAGGCTCTGTGGCAAGCTCCACTGGTTCTCCCGCTTCCATCAGAACCACTGACTTCCACAATCCTGGCTATCCCAAGTACCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CCA 90 bp CAGCCGCATCCGCAGCAGGTTGCCCAGGGTGAGCTCCTTGGACTGTaGTTTTCGGTTGGTGAGGTGATCAAACTTGTTGCTGCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: QPHPQQVAQGELLGL*FSVGEVIKLVAALE
Trigger: TTCCAGAGCAGCAACAAGTTTGATCACCTCACCAACCGAAAACCACAGTCCAAGGAGCTCACCCTGGGCAACCTGCTGCGGATGCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACAACAGCTCGGTCGGGTaGGGCGGCCCGCACGGCGAC +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNNSSVG*GGPHGD
Trigger: GTCGCCGTGCGGGCCGCCCAACCCGACCGAGCTGTT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS TCA 90 bp GCCAGAATGAAGGCCAAGGTGGTTTTCAGTAAAGAGTGTTCTCCTTaGCAGCATAGCCAGCATGTGGTTGAGCCGGGACCTGATACCAGC +
Preference number: 5 (lower is better)
Translates to: ARMKAKVVFSKECSP*QHSQHVVEPGPDTS
Trigger: GCTGGTATCAGGTCCCGGCTCAACCACATGCTGGCTATGCTGTCAAGGAGAACACTCTTTACTGAAAACCACCTTGGCCTTCATTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 90 bp AGTCTGAGTAGTGGTCGATCTGGACCAAATCGTGGTTTGAGAGCTTaGTATCCTGGTGATGACTGCAGTCTGGGTACCAGCACATGCTGT +
Preference number: 5 (lower is better)
Translates to: SLSSGRSGPNRGLRA*YPGDDCSLGTSTCC
Trigger: ACAGCATGTGCTGGTACCCAGACTGCAGTCATCACCAGGATAGCAAGCTCTCAAACCACGATTTGGTCCAGATCGACCACTACTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CCA 90 bp TGGTTTTCAGTAAAGAGTGTTCTCCTTGACAGCATAGCCAGCATGTaGTTGAGCCGGGACCTGATACCAGCGAAGTGGAATTGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: WFSVKSVLLDSIASM*LSRDLIPAKWNCRS
Trigger: AGAGCGGCAATTCCACTTCGCTGGTATCAGGTCCCGGCTCAACCACATGCTGGCTATGCTGTCAAGGAGAACACTCTTTACTGAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAAACAGCTCGGTCGGGTaGGGCGGCCCGCACGGCGAC +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRNSSVG*GGPHGD
Trigger: GTCGCCGTGCGGGCCGCCCAACCCGACCGAGCTGTT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCGCATCCGCAGCAGGTaGCCCAGGGTGAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNRIRSR*PRVSSL
Trigger: CAAGGAGCTCACCCTGGGCAACCTGCTGCGGATGCG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGGCTTGCGCTCTGCCTaGCCCTCTGCGGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNGLRSA*PSAGIS
Trigger: AGAGATGCCCGCAGAGGGCAAGGCAGAGCGCAAGCC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAAACAGGCCCGCGCCATaGGCCGCACCTCCCCGCCTC +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRNRPAP*AAPPRL
Trigger: GAGGCGGGGAGGTGCGGCCAATGGCGCGGGCCTGTT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619304.4
CDS GCA 90 bp GCCAGCATGTGGTTGAGCCGGGACCTGATACCAGCGAAGTGGAATTaGCGCTCTTTGTTCAAGTTTCTAAGTGAGTCACTCAAGTACAGT +
Preference number: 5 (lower is better)
Translates to: ASMWLSRDLIPAKWN*RSLFKFLSESLKYS
Trigger: ACTGTACTTGAGTGACTCACTTAGAAACTTGAACAAAGAGCGGCAATTCCACTTCGCTGGTATCAGGTCCCGGCTCAACCACATGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTCACAGTCATGGGGCTaGCGCTCTGCCTTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNSQSWG*RSALPS
Trigger: AGAGGGCAAGGCAGAGCGCAAGCCCCATGACTGTGA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACGCATCCGCAGCAGGTaGCCCAGGGTGAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRRIRSR*PRVSSL
Trigger: CAAGGAGCTCACCCTGGGCAACCTGCTGCGGATGCG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGGCTTGCGCTCTGCCTaGCCCTCTGCGGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRGLRSA*PSAGIS
Trigger: AGAGATGCCCGCAGAGGGCAAGGCAGAGCGCAAGCC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGAGAACCAGTGGAGCTaGCCACAGAGCCTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNENQWS*PQSLGK
Trigger: CTTCCCAAGGCTCTGTGGCAAGCTCCACTGGTTCTC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 90 bp TCCAGAAGGATATACACAGCAACTCCCTGTTTCCTGCATATTTCTTaGAGGTCTCTGAAGATGTCGATGTCTGTGAACACGTCCATGACC +
Preference number: 5 (lower is better)
Translates to: SRRIYTATPCFLHIS*RSLKMSMSVNTSMT
Trigger: GGTCATGGACGTGTTCACAGACATCGACATCTTCAGAGACCTGCAAGAAATATGCAGGAAACAGGGAGTTGCTGTGTATATCCTTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACAACTGTAGGAGCCTGTaGCCACGCGGATGCCATCAA +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNNCRSL*PRGCHQ
Trigger: TTGATGGCATCCGCGTGGCAACAGGCTCCTACAGTT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTTGGGGCTGATGGGCTaGGACTGGGCATACAGGATT +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNLGLMG*DWAYRI
Trigger: AATCCTGTATGCCCAGTCCAAGCCCATCAGCCCCAA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACATAGCCAGCATGTGGTaGAGCCGGGACCTGATACCA +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNIASMW*SRDLIP
Trigger: TGGTATCAGGTCCCGGCTCAACCACATGCTGGCTAT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATCACAGTCATGGGGCTaGCGCTCTGCCTTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRSQSWG*RSALPS
Trigger: AGAGGGCAAGGCAGAGCGCAAGCCCCATGACTGTGA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGACCCAGGGTGAGCTCCTaGGACTGTGGTTTTCGGTTG +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRPRVSS*DCGFRL
Trigger: CAACCGAAAACCACAGTCCAAGGAGCTCACCCTGGG...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACGGACCAAATCGTGGTTaGAGAGCTTGCTATCCTGGT +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNGPNRG*RACYPG
Trigger: ACCAGGATAGCAAGCTCTCAAACCACGATTTGGTCC...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGAGAACCAGTGGAGCTaGCCACAGAGCCTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRENQWS*PQSLGK
Trigger: CTTCCCAAGGCTCTGTGGCAAGCTCCACTGGTTCTC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACCTTTATAGGCAACCTTaGAATCAAACAGGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNLYRQP*NQTGPR
Trigger: GCGCGGGCCTGTTTGATTCAAAGGTTGCCTATAAAG...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619304.4
CDS GCA 90 bp GAACTGTCATTAACTTTTCCTGTTCAGGATGAACTTTCAGATCCATaGACATATCCAGAAATTGAGAGAGGAGAGCCTGGTCCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: ELSLTFPVQDELSDP*TYPEIERGEPGPEG
Trigger: TCCTTCTGGACCAGGCTCTCCTCTCTCAATTTCTGGATATGTGCATGGATCTGAAAGTTCATCCTGAACAGGAAAAGTTAATGACAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 90 bp ACCAGGAGTCTGAACACGGAGCAGTTACTGATAGGAAGGATAAAGTaGTACATCTCTAACAGCAAGCAAATTAACTCTGCTGAAATTGCC +
Preference number: 5 (lower is better)
Translates to: TRSLNTEQLLIGRIK*YISNSKQINSAEIA
Trigger: GGCAATTTCAGCAGAGTTAATTTGCTTGCTGTTAGAGATGTAGCACTTTATCCTTCCTATCAGTAACTGCTCCGTGTTCAGACTCCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATTGGGGCTGATGGGCTaGGACTGGGCATACAGGATT +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRLGLMG*DWAYRI
Trigger: AATCCTGTATGCCCAGTCCAAGCCCATCAGCCCCAA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATGTGGTGATGCTGGTTaGTGTTCCCACCTCACTCAC +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRCGDAG*CSHLTH
Trigger: GTGAGTGAGGTGGGAACACAAACCAGCATCACCACA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTCGATACAGACATTTTaGAGACTGGTGACCCTTCTG +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNSIQTF*RLVTLL
Trigger: CAGAAGGGTCACCAGTCTCAAAAATGTCTGTATCGA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTTTCCTGCATATTTCTaGCAGGTCTCTGAAGATGTC +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNFPAYF*QVSEDV
Trigger: GACATCTTCAGAGACCTGCAAGAAATATGCAGGAAA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACAAAGTGTTCAACCACTaGGCCAGACAGAATTACCAA +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNKVFNH*ARQNYQ
Trigger: TTGGTAATTCTGTCTGGCCAAGTGGTTGAACACTTT...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAGGACCAAATCGTGGTTaGAGAGCTTGCTATCCTGGT +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRGPNRG*RACYPG
Trigger: ACCAGGATAGCAAGCTCTCAAACCACGATTTGGTCC...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTGGAATTGCCGCTCTTaGTTCAAGTTTCTAAGTGAG +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNWNCRS*FKFLSE
Trigger: CTCACTTAGAAACTTGAACAAAGAGCGGCAATTCCA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGAACCAGCGAAGTGGAATaGCCGCTCTTTGTTCAAGTT +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRTSEVE*PLFVQV
Trigger: AACTTGAACAAAGAGCGGCAATTCCACTTCGCTGGT...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS TCA 90 bp AATCAACGTGAACTTTTCGTGAACCTTCCCAATAATCTTAGTTCCTaGCCTTGCATAGTAGATATTTCCTGTGATAGTCCGAACTGTCAT +
Preference number: 5 (lower is better)
Translates to: NQRELFVNLPNNLSS*PCIVDISCDSPNCH
Trigger: ATGACAGTTCGGACTATCACAGGAAATATCTACTATGCAAGGTCAGGAACTAAGATTATTGGGAAGGTTCACGAAAAGTTCACGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp AAAACAGGCTACAAACCTGTACATCATGTTACTGCACTGAATACTGTAGGCAACTTACTGCTGTTTAATTaGCCATCCGTCCATGTAAAA +
Preference number: 5 (lower is better)
Translates to: KTGYKPVHHVTALNTVGNLLLFN*PSVHVK
Trigger: TTTTACATGGACGGATGGCAAATTAAACAGCAGTAA...GTTGCCTACAGTATTCAGTGCAGTAACATGATGTACAGGTTTGTAGCCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATCGATACAGACATTTTaGAGACTGGTGACCCTTCTG +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRSIQTF*RLVTLL
Trigger: CAGAAGGGTCACCAGTCTCAAAAATGTCTGTATCGA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATTTCCTGCATATTTCTaGCAGGTCTCTGAAGATGTC +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRFPAYF*QVSEDV
Trigger: GACATCTTCAGAGACCTGCAAGAAATATGCAGGAAA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATGGAATTGCCGCTCTTaGTTCAAGTTTCTAAGTGAG +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRWNCRS*FKFLSE
Trigger: CTCACTTAGAAACTTGAACAAAGAGCGGCAATTCCA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS-3UTR CAA 90 bp GCACTGAATACTGTAGGCAACTGTAACATAATGGTATTTGTATCTAAACACAGATTACTGCTGTTTAATTaGCCATCCGTCCATGTAAAA +
Preference number: 5 (lower is better)
Translates to: ALNTVGNCNIMVFVSKHRLLLFN*PSVHVK
Trigger: TTTTACATGGACGGATGGCAAATTAAACAGCAGTAA...TCTGTGTTTAGATACAAATACCATTATGTTACAGTTGCCTACAGTATTCAGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 72 bp GCCAGGCGCCGTGACTCGCTGAACAGCTCGGTCGGGTaGGGCGGCCCGCACGGCGACAGGCAGGCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: ARRRDSLNSSVG*GGPHGDRQAAG
Trigger: GCCCGCCGCCTGCCTGTCGCCGTGCGGGCCGCCCAACCCGACCGAGCTGTTCAGCGAGTCACGGCGCCTGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CCA 72 bp CAGCGCCGCGGGGCTGGAAGTGCGTCTCGACACGCGTaGCGCCGCGGTAGGCGCCCTGGTAGAAGGCGGGCC +
Preference number: 6 (lower is better)
Translates to: QRRGAGSASRHA*RRGRRPGRRRA
Trigger: GGCCCGCCTTCTACCAGGGCGCCTACCGCGGCGCCACGCGTGTCGAGACGCACTTCCAGCCCCGCGGCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 90 bp TCCTCCAGAGCCAGGCGCCGTGACTCGCTGAACAGCTCGGTCGGGTaGGGCGGCCCGCACGGCGACAGGCAGGCGGCGGGCACCTCGTCC +
Preference number: 6 (lower is better)
Translates to: SSRARRRDSLNSSVG*GGPHGDRQAAGTSS
Trigger: GGACGAGGTGCCCGCCGCCTGCCTGTCGCCGTGCGGGCCGCCCAACCCGACCGAGCTGTTCAGCGAGTCACGGCGCCTGGCTCTGGAGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS TCA 72 bp CCACCAGCTCCTCCAGAGCCAGGCGCCGTGACTCGCTaGACAGCTCGGTCGGGTTGGGCGGCCCGCACGGCG +
Preference number: 6 (lower is better)
Translates to: PPAPPEPGAVTR*TARSGWAARTA
Trigger: CGCCGTGCGGGCCGCCCAACCCGACCGAGCTGTTCAGCGAGTCACGGCGCCTGGCTCTGGAGGAGCTGGTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 72 bp TCCTCTCCCGGCCTCTCCGCCGCGCGCAGAATGGCGTaGACCTCATCGGGGTTCAGGAAACGAGCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: SSPGLSAARRMA*TSSGFRKRARR
Trigger: GCGCCTGGCTCGTTTCCTGAACCCCGATGAGGTGCACGCCATTCTGCGCGCGGCGGAGAGGCCGGGAGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CCA 72 bp CGGGCACCTCGTCCAGGCCCTCGGACAGCAGAGCCATaGCGGCGCTCGGACTCGACAGCCCTCGGACAAAAA +
Preference number: 6 (lower is better)
Translates to: RAPRPGPRTAEP*RRSDSTALGQK
Trigger: TTTTTGTCCGAGGGCTGTCGAGTCCGAGCGCCGCCATGGCTCTGCTGTCCGAGGGCCTGGACGAGGTGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619304.4
CDS GCA 72 bp GCGGTGGCTCCAGGTCCGACTGCTCGGGGAAGTAGGTaGCCGAAGAGCAGTCGTGCGAGGAGCCGAACGAGT +
Preference number: 6 (lower is better)
Translates to: AVAPGPTARGSR*PKSSRARSRTS
Trigger: ACTCGTTCGGCTCCTCGCACGACTGCTCTTCGGGCACCTACTTCCCCGAGCAGTCGGACCTGGAGCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CCA 72 bp CTGGTAGAAGGCGGGCCAGCCAAGCTCCAACAGCGGTaGCTCCAGGTCCGACTGCTCGGGGAAGTAGGTGCC +
Preference number: 6 (lower is better)
Translates to: LVEGGPAKLQQR*LQVRLLGEVGA
Trigger: GGCACCTACTTCCCCGAGCAGTCGGACCTGGAGCCACCGCTGTTGGAGCTTGGCTGGCCCGCCTTCTACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 72 bp GTAGAGGACTCACAGTCATGGGGCTTGCGCTCTGCCTaGCCCTCTGCGGGCATCTCTGGGTCCAGGTCCGCC +
Preference number: 6 (lower is better)
Translates to: VEDSQSWGLRSA*PSAGISGSRSA
Trigger: GGCGGACCTGGACCCAGAGATGCCCGCAGAGGGCAAGGCAGAGCGCAAGCCCCATGACTGTGAGTCCTCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 90 bp CCCTCGGACAAAAACCGGCGTGCAGTCCCGCTTTATAGGCAACCTTaGAATCAAACAGGCCCGCGCCATTGGCCGCACCTCCCCGCCTCG +
Preference number: 6 (lower is better)
Translates to: PSDKNRRAVPLYRQP*NQTGPRHWPHLPAS
Trigger: CGAGGCGGGGAGGTGCGGCCAATGGCGCGGGCCTGTTTGATTCAAAGGTTGCCTATAAAGCGGGACTGCACGCCGGTTTTTGTCCGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619304.4
CDS CCA 72 bp TATAGGCAACCTTTGAATCAAACAGGCCCGCGCCATTaGCCGCACCTCCCCGCCTCGGCTCTCCCATTGGCT +
Preference number: 6 (lower is better)
Translates to: YRQPLNQTGPRH*PHLPASALPLA
Trigger: AGCCAATGGGAGAGCCGAGGCGGGGAGGTGCGGCCAATGGCGCGGGCCTGTTTGATTCAAAGGTTGCCTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619304.4
CDS CAA 72 bp GTACTTGACAGCCTAGCCAGCCGCATCCGCAGCAGGTaGCCCAGGGTGAGCTCCTTGGACTGTGGTTTTCGG +
Preference number: 6 (lower is better)
Translates to: VLDSLASRIRSR*PRVSSLDCGFR
Trigger: CCGAAAACCACAGTCCAAGGAGCTCACCCTGGGCAACCTGCTGCGGATGCGGCTGGCTAGGCTGTCAAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 90 bp TTCCTGGGAGTACTTGACAGCCTAGCCAGCCGCATCCGCAGCAGGTaGCCCAGGGTGAGCTCCTTGGACTGTGGTTTTCGGTTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: FLGVLDSLASRIRSR*PRVSSLDCGFRLVR
Trigger: CCTCACCAACCGAAAACCACAGTCCAAGGAGCTCACCCTGGGCAACCTGCTGCGGATGCGGCTGGCTAGGCTGTCAAGTACTCCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 90 bp CACCTCACTCACACTCAGCCCTGGCATCTCCTCTCCTGGCTCTGTTaGAGTGGCAGCGTCAATGGCCTTTCTGCTCTGGAGCTCGTCCCT +
Preference number: 6 (lower is better)
Translates to: HLTHTQPWHLLSWLC*SGSVNGLSALELVP
Trigger: AGGGACGAGCTCCAGAGCAGAAAGGCCATTGACGCTGCCACTCAAACAGAGCCAGGAGAGGAGATGCCAGGGCTGAGTGTGAGTGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS TCA 72 bp AAAACCGGCGTGCAGTCCCGCTTTATAGGCAACCTTTaGATCAAACAGGCCCGCGCCATTGGCCGCACCTCC +
Preference number: 6 (lower is better)
Translates to: KTGVQSRFIGNL*IKQARAIGRTS
Trigger: GGAGGTGCGGCCAATGGCGCGGGCCTGTTTGATTCAAAGGTTGCCTATAAAGCGGGACTGCACGCCGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619304.4
CDS CCA 72 bp CCGCAGCAGGTTGCCCAGGGTGAGCTCCTTGGACTGTaGTTTTCGGTTGGTGAGGTGATCAAACTTGTTGCT +
Preference number: 6 (lower is better)
Translates to: PQQVAQGELLGL*FSVGEVIKLVA
Trigger: AGCAACAAGTTTGATCACCTCACCAACCGAAAACCACAGTCCAAGGAGCTCACCCTGGGCAACCTGCTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS TCA 72 bp ACTTGGGATAGCCAGGATTGTGGAAGTCAGTGGTTCTaGTGGAAGCGGGAGAACCAGTGGAGCTTGCCACAG +
Preference number: 6 (lower is better)
Translates to: TWDSQDCGSQWF*WKRENQWSLPQ
Trigger: CTGTGGCAAGCTCCACTGGTTCTCCCGCTTCCATCAGAACCACTGACTTCCACAATCCTGGCTATCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 72 bp TATCCTGGTGATGACTGCAGTCTGGGTACCAGCACATaGTGTGGTGATGCTGGTTTGTGTTCCCACCTCACT +
Preference number: 6 (lower is better)
Translates to: YPGDDCSLGTST*CGDAGLCSHLT
Trigger: AGTGAGGTGGGAACACAAACCAGCATCACCACAGCATGTGCTGGTACCCAGACTGCAGTCATCACCAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 72 bp AGTGGTCGATCTGGACCAAATCGTGGTTTGAGAGCTTaGTATCCTGGTGATGACTGCAGTCTGGGTACCAGC +
Preference number: 6 (lower is better)
Translates to: SGRSGPNRGLRA*YPGDDCSLGTS
Trigger: GCTGGTACCCAGACTGCAGTCATCACCAGGATAGCAAGCTCTCAAACCACGATTTGGTCCAGATCGACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 72 bp AAGAGTGTTCTCCTTGACAGCATAGCCAGCATGTGGTaGAGCCGGGACCTGATACCAGCGAAGTGGAATTGC +
Preference number: 6 (lower is better)
Translates to: KSVLLDSIASMW*SRDLIPAKWNC
Trigger: GCAATTCCACTTCGCTGGTATCAGGTCCCGGCTCAACCACATGCTGGCTATGCTGTCAAGGAGAACACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 90 bp ATCCATGTCAGTCTGAGTAGTGGTCGATCTGGACCAAATCGTGGTTaGAGAGCTTGCTATCCTGGTGATGACTGCAGTCTGGGTACCAGC +
Preference number: 6 (lower is better)
Translates to: IHVSLSSGRSGPNRG*RACYPGDDCSLGTS
Trigger: GCTGGTACCCAGACTGCAGTCATCACCAGGATAGCAAGCTCTCAAACCACGATTTGGTCCAGATCGACCACTACTCAGACTGACATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CCA 72 bp GTAAAGAGTGTTCTCCTTGACAGCATAGCCAGCATGTaGTTGAGCCGGGACCTGATACCAGCGAAGTGGAAT +
Preference number: 6 (lower is better)
Translates to: VKSVLLDSIASM*LSRDLIPAKWN
Trigger: ATTCCACTTCGCTGGTATCAGGTCCCGGCTCAACCACATGCTGGCTATGCTGTCAAGGAGAACACTCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 90 bp TGGTTGAGCCGGGACCTGATACCAGCGAAGTGGAATTGCCGCTCTTaGTTCAAGTTTCTAAGTGAGTCACTCAAGTACAGTTCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: WLSRDLIPAKWNCRS*FKFLSESLKYSSRW
Trigger: CCACCTGGAACTGTACTTGAGTGACTCACTTAGAAACTTGAACAAAGAGCGGCAATTCCACTTCGCTGGTATCAGGTCCCGGCTCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 90 bp TTTTCAGTAAAGAGTGTTCTCCTTGACAGCATAGCCAGCATGTGGTaGAGCCGGGACCTGATACCAGCGAAGTGGAATTGCCGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: FSVKSVLLDSIASMW*SRDLIPAKWNCRSL
Trigger: CAAAGAGCGGCAATTCCACTTCGCTGGTATCAGGTCCCGGCTCAACCACATGCTGGCTATGCTGTCAAGGAGAACACTCTTTACTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 72 bp TGGTTGAGCCGGGACCTGATACCAGCGAAGTGGAATTaGCGCTCTTTGTTCAAGTTTCTAAGTGAGTCACTC +
Preference number: 6 (lower is better)
Translates to: WLSRDLIPAKWN*RSLFKFLSESL
Trigger: GAGTGACTCACTTAGAAACTTGAACAAAGAGCGGCAATTCCACTTCGCTGGTATCAGGTCCCGGCTCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 72 bp AGTCTGAGTAGTGGTCGATCTGGACCAAATCGTGGTTaGAGAGCTTGCTATCCTGGTGATGACTGCAGTCTG +
Preference number: 6 (lower is better)
Translates to: SLSSGRSGPNRG*RACYPGDDCSL
Trigger: CAGACTGCAGTCATCACCAGGATAGCAAGCTCTCAAACCACGATTTGGTCCAGATCGACCACTACTCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 72 bp TTTGCCATCCGTCCATGTAAAACTGTAGGAGCCTGTTaGCACGCGGATGCCATCAATCAACGTGAACTTTTC +
Preference number: 6 (lower is better)
Translates to: FAIRPCKTVGAC*HADAINQRELF
Trigger: GAAAAGTTCACGTTGATTGATGGCATCCGCGTGGCAACAGGCTCCTACAGTTTTACATGGACGGATGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 90 bp GTCCAGAAGGATATACACAGCAACTCCCTGTTTCCTGCATATTTCTaGCAGGTCTCTGAAGATGTCGATGTCTGTGAACACGTCCATGAC +
Preference number: 6 (lower is better)
Translates to: VQKDIHSNSLFPAYF*QVSEDVDVCEHVHD
Trigger: GTCATGGACGTGTTCACAGACATCGACATCTTCAGAGACCTGCAAGAAATATGCAGGAAACAGGGAGTTGCTGTGTATATCCTTCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS TCA 72 bp GCCACGCGGATGCCATCAATCAACGTGAACTTTTCGTaGACCTTCCCAATAATCTTAGTTCCTGACCTTGCA +
Preference number: 6 (lower is better)
Translates to: ATRMPSINVNFS*TFPIILVPDLA
Trigger: TGCAAGGTCAGGAACTAAGATTATTGGGAAGGTTCACGAAAAGTTCACGTTGATTGATGGCATCCGCGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS CAA 72 bp CGGGACCTGATACCAGCGAAGTGGAATTGCCGCTCTTaGTTCAAGTTTCTAAGTGAGTCACTCAAGTACAGT +
Preference number: 6 (lower is better)
Translates to: RDLIPAKWNCRS*FKFLSESLKYS
Trigger: ACTGTACTTGAGTGACTCACTTAGAAACTTGAACAAAGAGCGGCAATTCCACTTCGCTGGTATCAGGTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 72 bp ATATACACAGCAACTCCCTGTTTCCTGCATATTTCTTaGAGGTCTCTGAAGATGTCGATGTCTGTGAACACG +
Preference number: 6 (lower is better)
Translates to: IYTATPCFLHIS*RSLKMSMSVNT
Trigger: CGTGTTCACAGACATCGACATCTTCAGAGACCTGCAAGAAATATGCAGGAAACAGGGAGTTGCTGTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 72 bp TTAACTTTTCCTGTTCAGGATGAACTTTCAGATCCATaGACATATCCAGAAATTGAGAGAGGAGAGCCTGGT +
Preference number: 6 (lower is better)
Translates to: LTFPVQDELSDP*TYPEIERGEPG
Trigger: ACCAGGCTCTCCTCTCTCAATTTCTGGATATGTGCATGGATCTGAAAGTTCATCCTGAACAGGAAAAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2
CDS GCA 72 bp CTGAACACGGAGCAGTTACTGATAGGAAGGATAAAGTaGTACATCTCTAACAGCAAGCAAATTAACTCTGCT +
Preference number: 6 (lower is better)
Translates to: LNTEQLLIGRIK*YISNSKQINSA
Trigger: AGCAGAGTTAATTTGCTTGCTGTTAGAGATGTAGCACTTTATCCTTCCTATCAGTAACTGCTCCGTGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619304.4
ENST00000619850.2