Pregenerated sensors for FAM76B (Homo sapiens)
Ensembl gene IDs: ENSG00000077458Ensembl transcript IDs: ENST00000358780.10, ENST00000398187.6, ENST00000535919.1, ENST00000536839.1, ENST00000538047.5, ENST00000538316.1, ENST00000540054.5, ENST00000541418.1, ENST00000542135.5, ENST00000543641.5, ENST00000545654.5
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTTATTGTGAAATATTGGATCCTTTGATAATGCTGCGACCTGTTTaGGTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: FYCEILDPLIMLRPV*VVLCFWPEVVPQFL Trigger: AAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTACTCAAACAGGTCGCAGCATTATCAAAGGATCCAATATTTCACAATAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543641.5 |
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| 3UTR-3UTR TCA 90 bp | AGTGGAAAACAGGCTAAAAGCACAATACACCACACCATAGTATCTCCTTACAGGAAAACCCTGCTGCTCTaGCTTCTGAAACCATACCTA | + |
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Preference number: 2 (lower is better) Translates to: SGKQAKSTIHHTIVSPYRKTLLL*LLKPYL Trigger: TAGGTATGGTTTCAGAAGTCAGAGCAGCAGGGTTTT...CCTGTAAGGAGATACTATGGTGTGGTGTATTGTGCTTTTAGCCTGTTTTCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGGAAAACAGGCTAAAAGCACAATACACCACACCATAGTATCTCCTTACAGGTCCCCCACTATCTGCTaGCTGATTTATAGAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: SGKQAKSTIHHTIVSPYRSPTIC*LIYRAT Trigger: AGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGA...CCTGTAAGGAGATACTATGGTGTGGTGTATTGTGCTTTTAGCCTGTTTTCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000398187.6 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAAAACAGGCTAAAAGCACAATACACCACACCATAGTATCTCCTTACAGGATGGTCTGGTCTCTCTaGTGTAAGAGACGCTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: SGKQAKSTIHHTIVSPYRMVWSL*CKRRLS Trigger: ACTTAAGCGTCTCTTACAGCAGAGAGACCAGACCAT...CCTGTAAGGAGATACTATGGTGTGGTGTATTGTGCTTTTAGCCTGTTTTCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398187.6 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTTCCCCCACTATCTGCTaGCTGATTTATAGAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFSPTIC*LIYRAT Trigger: AGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGA...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTATGGTCTGGTCTCTCTaGTGTAAGAGACGCTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVMVWSL*CKRRLS Trigger: ACTTAAGCGTCTCTTACAGCAGAGAGACCAGACCAT...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| 3UTR-3UTR GCA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTAATCCGACATTCCGTTaGTCACAGACAGCATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PKLLHILSTLLTNCVSFANPTFR*SQTASR Trigger: CCTGGATGCTGTCTGTGAGCAACGGAATGTCGGATT...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538316.1 |
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| 3UTR CAA 90 bp | AAAAACCCTGCTGCTCTGACTTCTGAAACCATACCTACTCTATTATaGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: KNPAALTSETIPTLL*HVAFHKEHYSCTPL Trigger: TAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGTCAGAGCAGCAGGGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| 3UTR-3UTR TCA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCAATGCTGCGACCTGTTTaGGTAGTTCTCTGTTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSMLRPV*VVLCFW Trigger: CCAAAAACAGAGAACTACTCAAACAGGTCGCAGCAT...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398187.6 |
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| 3UTR-3UTR TCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAAATGACCACTGTGGACTaGCAAATGGCTATGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: YSISIVYTCEQLNRFTAEMTTVD*QMAMKQ Trigger: TTGTTTCATAGCCATTTGTCAGTCCACAGTGGTCAT...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
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| 3UTR-3UTR CCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTAGAAATGGATGCAACTaGCAAATTACCTTACTAATG | + |
|
Preference number: 2 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFRNGCN*QITLLM Trigger: CATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCT...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| 3UTR-3UTR TCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAATTTGACTCTTGGTACTaGAAGTCTGCCTTTAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: YSISIVYTCEQLNRFTAEFDSWY*KSAFSS Trigger: TGAACTAAAGGCAGACTTTCAGTACCAAGAGTCAAA...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398187.6 |
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| 3UTR-3UTR GCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACACTGACAGAAATGGATaGAACTGGCAAATTACCTTA | + |
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Preference number: 2 (lower is better) Translates to: TSETIPTLLLHVAFHKEHTDRNG*NWQITL Trigger: TAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGT...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398187.6 |
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| 3UTR-3UTR GCA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTTTTTACAATAGGATGTaGAATCCGACATTCCGTTGC | + |
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Preference number: 2 (lower is better) Translates to: PKLLHILSTLLTNCVSFAFYNRM*NPTFRC Trigger: GCAACGGAATGTCGGATTGCACATCCTATTGTAAAA...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000538316.1 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTTTTCTAAAATGGTCTaGTCTCTCTGCTGTAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: TSETIPTLLLHVAFHKEHFSKMV*SLCCKR Trigger: TCTCTTACAGCAGAGAGACCAGACCATTTTAGAAAA...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398187.6 |
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| 3UTR-3UTR CCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAAAGAAATGGATGCAACTaGCAAATTACCTTACTAATG | + |
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Preference number: 2 (lower is better) Translates to: YSISIVYTCEQLNRFTAERNGCN*QITLLM Trigger: CATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCT...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398187.6 |
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| 3UTR-3UTR CAA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTCAATCCGACATTCCGTaGCTCACAGACAGCATCCAG | + |
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Preference number: 3 (lower is better) Translates to: PKLLHILSTLLTNCVSFAQSDIP*LTDSIQ Trigger: CTGGATGCTGTCTGTGAGCAACGGAATGTCGGATTG...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538316.1 |
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| 3UTR TCA 72 bp | AGGACAAAATTGTCTGTTCCCCCACTATCTGCTGACTaGTTTATAGAGCTACTGACAGAAATGGATGCAACT | + |
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Preference number: 3 (lower is better) Translates to: RTKLSVPPLSAD*FIELLTEMDAT Trigger: AGTTGCATCCATTTCTGTCAGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| 3UTR-3UTR CAA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTCTTATAAGGACAAAATaGTCTGTTCCCCCACTATCT | + |
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Preference number: 3 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVLIRTK*SVPPLS Trigger: AGATAGTGGGGGAACAGACAATTTTGTCCTTATAAG...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| 3UTR TCA 72 bp | TATAAGGACAAAATTGTCTGTTCCCCCACTATCTGCTaGCTGATTTATAGAGCTACTGACAGAAATGGATGC | + |
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Preference number: 3 (lower is better) Translates to: YKDKIVCSPTIC*LIYRATDRNGC Trigger: GCATCCATTTCTGTCAGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| 3UTR TCA 72 bp | GAAATATTGGATCCTTTGATAATGCTGCGACCTGTTTaGGTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: EILDPLIMLRPV*VVLCFWPEVVP Trigger: TGGAACAACTTCAGGCCAAAAACAGAGAACTACTCAAACAGGTCGCAGCATTATCAAAGGATCCAATATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543641.5 |
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| 3UTR GCA 72 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATaGACTCCTTTACAACTGTTTAATACTATTGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LLHVAFHKEHYS*TPLQLFNTIAG Trigger: GCCAGCAATAGTATTAAACAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| 3UTR-3UTR CAA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCACTCTATTATTGCATGTaGCGTTTCATAAAGAGCACT | + |
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Preference number: 3 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSLYYCM*RFIKST Trigger: AGTGCTCTTTATGAAACGCAACATGCAATAATAGAG...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| 3UTR-3UTR CAA 90 bp | AAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATCTTATAAGGACAAAATaGTCTGTTCCCCCACTATCT | + |
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Preference number: 3 (lower is better) Translates to: KPYLLYYCMLRFIKSTTHLIRTK*SVPPLS Trigger: AGATAGTGGGGGAACAGACAATTTTGTCCTTATAAG...ATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398187.6 |
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| CDS-3UTR TCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTCCCCAGCCCACCCAGTaGCGCCGTGCCAGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVPQPTQ*RRASRS Trigger: GGAGCGGCTGGCACGGCGTCACTGGGTGGGCTGGGG...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000543641.5 |
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| CDS-3UTR TCA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCACCCCAGCCCACCCAGTaGCGCCGTGCCAGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSPQPTQ*RRASRS Trigger: GGAGCGGCTGGCACGGCGTCACTGGGTGGGCTGGGG...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358780.10 |
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| CDS-3UTR TCA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTCCCCAGCCCACCCAGTaGCGCCGTGCCAGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PKLLHILSTLLTNCVSFAPQPTQ*RRASRS Trigger: GGAGCGGCTGGCACGGCGTCACTGGGTGGGCTGGGG...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000538316.1 |
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| CDS-3UTR GCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTCACCCAGTGACGCCGTaGCAGCCGCTCCCGCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVHPVTP*QPLPLR Trigger: CCTAAGCGGGAGCGGCTGGCACGGCGTCACTGGGTG...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000543641.5 |
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| CDS-3UTR GCA 90 bp | AGTGGAAAACAGGCTAAAAGCACAATACACCACACCATAGTATCTCCTTACAGGGCTGGGTACACTTGGTaGAGGCGTACAGGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: SGKQAKSTIHHTIVSPYRAGYTW*RRTGPR Trigger: CCTCGGCCCTGTACGCCTGCACCAAGTGTACCCAGC...CCTGTAAGGAGATACTATGGTGTGGTGTATTGTGCTTTTAGCCTGTTTTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
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| CDS-3UTR GCA 90 bp | AGTGGAAAACAGGCTAAAAGCACAATACACCACACCATAGTATCTCCTTACAGGAAGCGGGTAGGGGGTTaGTGTTTAGCTGTGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SGKQAKSTIHHTIVSPYRKRVGG*CLAVRP Trigger: CGGCCGCACAGCTAAACAGCAACCCCCTACCCGCTT...CCTGTAAGGAGATACTATGGTGTGGTGTATTGTGCTTTTAGCCTGTTTTCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000358780.10 |
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| CDS-3UTR GCA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACAAGCGGGTAGGGGGTTaGTGTTTAGCTGTGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RATDRNGCNWQITLLMAHKRVGG*CLAVRP Trigger: CGGCCGCACAGCTAAACAGCAACCCCCTACCCGCTT...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543641.5 |
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| CDS-3UTR GCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTGCTGGGTACACTTGGTaGAGGCGTACAGGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFAGYTW*RRTGPR Trigger: CCTCGGCCCTGTACGCCTGCACCAAGTGTACCCAGC...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS-3UTR GCA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACCATTCCTTGCAGAGCTaGTGGCCCTGGGAGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RATDRNGCNWQITLLMAHHSLQS*WPWESS Trigger: GGAGCTCTCCCAGGGCCAGCAGCTCTGCAAGGAATG...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS-3UTR CCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTTCCTTGCAGAGCTGCTaGCCCTGGGAGAGCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFSLQSC*PWESSS Trigger: CGAGGAGCTCTCCCAGGGCCAGCAGCTCTGCAAGGA...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS-3UTR CCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTTCCTTGCAGAGCTGCTaGCCCTGGGAGAGCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVSLQSC*PWESSS Trigger: CGAGGAGCTCTCCCAGGGCCAGCAGCTCTGCAAGGA...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS-3UTR GCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAACACCCAGTGACGCCGTaGCAGCCGCTCCCGCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: YSISIVYTCEQLNRFTAEHPVTP*QPLPLR Trigger: CCTAAGCGGGAGCGGCTGGCACGGCGTCACTGGGTG...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358780.10 |
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| CDS-3UTR GCA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTCACCCAGTGACGCCGTaGCAGCCGCTCCCGCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: PKLLHILSTLLTNCVSFAHPVTP*QPLPLR Trigger: CCTAAGCGGGAGCGGCTGGCACGGCGTCACTGGGTG...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538316.1 |
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| CDS-3UTR GCA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGGCTGGGTACACTTGGTaGAGGCGTACAGGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLAGYTW*RRTGPR Trigger: CCTCGGCCCTGTACGCCTGCACCAAGTGTACCCAGC...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS-3UTR GCA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACCAATCCGACATTCCTTaGAGAGCTGCTGGCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RATDRNGCNWQITLLMAHQSDIP*RAAGPG Trigger: CCCAGGGCCAGCAGCTCTGCAAGGAATGTCGGATTG...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS-3UTR CCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCAGAGCTGCTGGCCCTaGGAGAGCTCCTCGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFQSCWP*ESSSKG Trigger: TCCTTTCGAGGAGCTCTCCCAGGGCCAGCAGCTCTG...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS-3UTR CCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTCAGAGCTGCTGGCCCTaGGAGAGCTCCTCGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVQSCWP*ESSSKG Trigger: TCCTTTCGAGGAGCTCTCCCAGGGCCAGCAGCTCTG...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS-3UTR GCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACGCTGGGTACACTTGGTaGAGGCGTACAGGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: TSETIPTLLLHVAFHKEHAGYTW*RRTGPR Trigger: CCTCGGCCCTGTACGCCTGCACCAAGTGTACCCAGC...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS-3UTR GCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCAATCCGACATTCCTTaGAGAGCTGCTGGCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFQSDIP*RAAGPG Trigger: CCCAGGGCCAGCAGCTCTGCAAGGAATGTCGGATTG...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS-3UTR CCA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGCAGAGCTGCTGGCCCTaGGAGAGCTCCTCGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLQSCWP*ESSSKG Trigger: TCCTTTCGAGGAGCTCTCCCAGGGCCAGCAGCTCTG...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS-3UTR GCA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTGCTGGGTACACTTGGTaGAGGCGTACAGGGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKLLHILSTLLTNCVSFAAGYTW*RRTGPR Trigger: CCTCGGCCCTGTACGCCTGCACCAAGTGTACCCAGC...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538316.1 |
||
| CDS-3UTR GCA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCACATTCCTTGCAGAGCTaGTGGCCCTGGGAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSHSLQS*WPWESS Trigger: GGAGCTCTCCCAGGGCCAGCAGCTCTGCAAGGAATG...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR GCA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGCAATCCGACATTCCTTaGAGAGCTGCTGGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLQSDIP*RAAGPG Trigger: CCCAGGGCCAGCAGCTCTGCAAGGAATGTCGGATTG...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACCAGAGCTGCTGGCCCTaGGAGAGCTCCTCGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSETIPTLLLHVAFHKEHQSCWP*ESSSKG Trigger: TCCTTTCGAGGAGCTCTCCCAGGGCCAGCAGCTCTG...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAATCCTTGCAGAGCTGCTaGCCCTGGGAGAGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YSISIVYTCEQLNRFTAESLQSC*PWESSS Trigger: CGAGGAGCTCTCCCAGGGCCAGCAGCTCTGCAAGGA...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR CCA 90 bp | AAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATTCCTTGCAGAGCTGCTaGCCCTGGGAGAGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KPYLLYYCMLRFIKSTTHSLQSC*PWESSS Trigger: CGAGGAGCTCTCCCAGGGCCAGCAGCTCTGCAAGGA...ATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CCA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTTCCTTGCAGAGCTGCTaGCCCTGGGAGAGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PKLLHILSTLLTNCVSFASLQSC*PWESSS Trigger: CGAGGAGCTCTCCCAGGGCCAGCAGCTCTGCAAGGA...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538316.1 |
||
| CDS-3UTR GCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACCAATCCGACATTCCTTaGAGAGCTGCTGGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSETIPTLLLHVAFHKEHQSDIP*RAAGPG Trigger: CCCAGGGCCAGCAGCTCTGCAAGGAATGTCGGATTG...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR GCA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTCTTTCCTTGCAGAGCTaGTGGCCCTGGGAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKLLHILSTLLTNCVSFALSLQS*WPWESS Trigger: GGAGCTCTCCCAGGGCCAGCAGCTCTGCAAGGAAAG...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538316.1 |
||
| CDS-3UTR GCA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTTCGCTTCGCTTTCCTTaGAGAGCTGCTGGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKLLHILSTLLTNCVSFASLRFP*RAAGPG Trigger: CCCAGGGCCAGCAGCTCTGCAAGGAAAGCGAAGCGA...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538316.1 |
||
| CDS-3UTR CCA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTCAGAGCTGCTGGCCCTaGGAGAGCTCCTCGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKLLHILSTLLTNCVSFAQSCWP*ESSSKG Trigger: TCCTTTCGAGGAGCTCTCCCAGGGCCAGCAGCTCTG...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538316.1 |
||
| CDS-3UTR TCA 90 bp | AGTGGAAAACAGGCTAAAAGCACAATACACCACACCATAGTATCTCCTTACAGGATTATGTTACAGTACTaGCAAGGCTTGGGCGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGKQAKSTIHHTIVSPYRIMLQY*QGLGVP Trigger: TGGGACGCCCAAGCCTTGTCAGTACTGTAACATAAT...CCTGTAAGGAGATACTATGGTGTGGTGTATTGTGCTTTTAGCCTGTTTTCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR TCA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACATGCTGCGACCTGTTTaGGTAGTTCTCTGTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RATDRNGCNWQITLLMAHMLRPV*VVLCFW Trigger: CCAAAAACAGAGAACTACTCAAACAGGTCGCAGCAT...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR GCA 90 bp | AGTGGAAAACAGGCTAAAAGCACAATACACCACACCATAGTATCTCCTTACAGGAAGCACATTGCTGTTTaGACTGTTCACAGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGKQAKSTIHHTIVSPYRKHIAV*TVHRSE Trigger: CTCAGACCTGTGAACAGTGCAAACAGCAATGTGCTT...CCTGTAAGGAGATACTATGGTGTGGTGTATTGTGCTTTTAGCCTGTTTTCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR GCA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACAAGCACATTGCTGTTTaGACTGTTCACAGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RATDRNGCNWQITLLMAHKHIAV*TVHRSE Trigger: CTCAGACCTGTGAACAGTGCAAACAGCAATGTGCTT...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR GCA 90 bp | AGTGGAAAACAGGCTAAAAGCACAATACACCACACCATAGTATCTCCTTACAGGTTTTGTGATGGCTACTaGTGTGACGATGGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGKQAKSTIHHTIVSPYRFCDGY*CDDGDG Trigger: ACCATCACCATCGTCACAGCAGTAGCCATCACAAAA...CCTGTAAGGAGATACTATGGTGTGGTGTATTGTGCTTTTAGCCTGTTTTCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR GCA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACTTTTGTGATGGCTACTaGTGTGACGATGGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RATDRNGCNWQITLLMAHFCDGY*CDDGDG Trigger: ACCATCACCATCGTCACAGCAGTAGCCATCACAAAA...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTTCCCCCACTATCTGCTaGCTGATTTATAGAGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVSPTIC*LIYRAT Trigger: AGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGA...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTATGCTGCGACCTGTTTaGGTAGTTCTCTGTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVMLRPV*VVLCFW Trigger: CCAAAAACAGAGAACTACTCAAACAGGTCGCAGCAT...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR TCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTAAAACCCTGCTGCTCTaGCTTCTGAAACCATACCTA | + |
|
Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFKTLLL*LLKPYL Trigger: TAGGTATGGTTTCAGAAGTCAGAGCAGCAGGGTTTT...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000398187.6 |
||
| CDS-3UTR TCA 90 bp | AGTGGAAAACAGGCTAAAAGCACAATACACCACACCATAGTATCTCCTTACAGGATGACCACTGTGGACTaGCAAATGGCTATGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SGKQAKSTIHHTIVSPYRMTTVD*QMAMKQ Trigger: TTGTTTCATAGCCATTTGTCAGTCCACAGTGGTCAT...CCTGTAAGGAGATACTATGGTGTGGTGTATTGTGCTTTTAGCCTGTTTTCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTTTTTGTGATGGCTACTaGTGTGACGATGGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVFCDGY*CDDGDG Trigger: ACCATCACCATCGTCACAGCAGTAGCCATCACAAAA...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR GCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTATGGTCTGGTCTCTCTaGTGTAAGAGACGCTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFMVWSL*CKRRLS Trigger: ACTTAAGCGTCTCTTACAGCAGAGAGACCAGACCAT...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| 3UTR CAA 72 bp | GCTGCTCTGACTTCTGAAACCATACCTACTCTATTATaGCATGTTGCGTTTCATAAAGAGCACTACTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: AALTSETIPTLL*HVAFHKEHYSC Trigger: GCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGTCAGAGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR TCA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACTTTGACTCTTGGTACTaGAAGTCTGCCTTTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RATDRNGCNWQITLLMAHFDSWY*KSAFSS Trigger: TGAACTAAAGGCAGACTTTCAGTACCAAGAGTCAAA...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR TCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTTCTCTGTTTTTGGCCTaGAGTTGTTCCACAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFSLFLA*SCSTVS Trigger: AGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGA...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR TCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCACTATCTGCTGACTaGTTTATAGAGCTACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFPLSAD*FIELLT Trigger: TGTCAGTAGCTCTATAAATCAGTCAGCAGATAGTGG...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR GCA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGATGGTCTGGTCTCTCTaGTGTAAGAGACGCTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLMVWSL*CKRRLS Trigger: ACTTAAGCGTCTCTTACAGCAGAGAGACCAGACCAT...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CCA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACTCCACAGTTTCTTTGTaGGCTTTTTCCATACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RATDRNGCNWQITLLMAHSTVSL*AFSILF Trigger: GAACAGTATGGAAAAAGCCCACAAAGAAACTGTGGA...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTGTAGTTCTCTGTTTTTaGCCTGAAGTTGTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVVVLCF*PEVVPQ Trigger: CTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR CCA 90 bp | AGTGGAAAACAGGCTAAAAGCACAATACACCACACCATAGTATCTCCTTACAGGCCTATCTCCATTAGATaGCTTAGATTCCAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKQAKSTIHHTIVSPYRPISIR*LRFQFG Trigger: CCCAAATTGGAATCTAAGCCATCTAATGGAGATAGG...CCTGTAAGGAGATACTATGGTGTGGTGTATTGTGCTTTTAGCCTGTTTTCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398187.6 |
||
| CDS-3UTR CCA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACCCTATCTCCATTAGATaGCTTAGATTCCAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RATDRNGCNWQITLLMAHPISIR*LRFQFG Trigger: CCCAAATTGGAATCTAAGCCATCTAATGGAGATAGG...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR TCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAAATTATGTTACAGTACTaGCAAGGCTTGGGCGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSISIVYTCEQLNRFTAEIMLQY*QGLGVP Trigger: TGGGACGCCCAAGCCTTGTCAGTACTGTAACATAAT...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR TCA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGTCTCTGTTTTTGGCCTaGAGTTGTTCCACAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLSLFLA*SCSTVS Trigger: AGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGA...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR TCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACATGCTGCGACCTGTTTaGGTAGTTCTCTGTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSETIPTLLLHVAFHKEHMLRPV*VVLCFW Trigger: CCAAAAACAGAGAACTACTCAAACAGGTCGCAGCAT...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR TCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTAATTCTATTTCAGGCTaGAAACCGCTGGATCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFNSISG*KPLDQN Trigger: ATTCTGATCCAGCGGTTTTCAGCCTGAAATAGAATT...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000398187.6 |
||
| CDS-3UTR TCA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGATGACCACTGTGGACTaGCAAATGGCTATGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLMTTVD*QMAMKQ Trigger: TTGTTTCATAGCCATTTGTCAGTCCACAGTGGTCAT...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR TCA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATCCCCCACTATCTGCTaGCTGATTTATAGAGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSSPTIC*LIYRAI Trigger: GATAGCTCTATAAATCAGTCAGCAGATAGTGGGGGA...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536839.1 |
||
| CDS-3UTR GCA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCAAAGCACATTGCTGTTTaGACTGTTCACAGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSKHIAV*TVHRSE Trigger: CTCAGACCTGTGAACAGTGCAAACAGCAATGTGCTT...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR GCA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATTTTGTGATGGCTACTaGTGTGACGATGGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSFCDGY*CDDGDG Trigger: ACCATCACCATCGTCACAGCAGTAGCCATCACAAAA...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR GCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACATGGTCTGGTCTCTCTaGTGTAAGAGACGCTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSETIPTLLLHVAFHKEHMVWSL*CKRRLS Trigger: ACTTAAGCGTCTCTTACAGCAGAGAGACCAGACCAT...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CCA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGGTAGTTCTCTGTTTTTaGCCTGAAGTTGTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLVVLCF*PEVVPQ Trigger: CTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CCA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTCAGGCTTTAATGGGATaGGAGGAGCTCCAAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKLLHILSTLLTNCVSFAQALMG*EELQIR Trigger: TCTGATTTGGAGCTCCTCCCATCCCATTAAAGCCTG...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538316.1 |
||
| CDS-3UTR TCA 90 bp | AAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATTCCCCCACTATCTGCTaGCTGATTTATAGAGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: KPYLLYYCMLRFIKSTTHSPTIC*LIYRAT Trigger: AGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGA...ATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR TCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAATCCCCCACTATCTGCTaGCTGATTTATAGAGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: YSISIVYTCEQLNRFTAESPTIC*LIYRAT Trigger: AGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGA...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR TCA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATCTCTGTTTTTGGCCTaGAGTTGTTCCACAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSSLFLA*SCSTVS Trigger: AGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGA...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR TCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAAATGCTGCGACCTGTTTaGGTAGTTCTCTGTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSISIVYTCEQLNRFTAEMLRPV*VVLCFW Trigger: CCAAAAACAGAGAACTACTCAAACAGGTCGCAGCAT...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR TCA 90 bp | AAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATAAAACCCTGCTGCTCTaGCTTCTGAAACCATACCTA | + |
|
Preference number: 4 (lower is better) Translates to: KPYLLYYCMLRFIKSTTHKTLLL*LLKPYL Trigger: TAGGTATGGTTTCAGAAGTCAGAGCAGCAGGGTTTT...ATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR TCA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGAATTCTATTTCAGGCTaGAAACCGCTGGATCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLNSISG*KPLDQN Trigger: ATTCTGATCCAGCGGTTTTCAGCCTGAAATAGAATT...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR TCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACCCACTATCTGCTGACTaGTTTATAGAGCTATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSETIPTLLLHVAFHKEHPLSAD*FIELSP Trigger: TGGAGATAGCTCTATAAATCAGTCAGCAGATAGTGG...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536839.1 |
||
| CDS-3UTR GCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTACTGACAGAAATGGATaGAACTGGCAAATTACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFTDRNG*NWQITL Trigger: TAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGT...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTACTGACAGAAATGGATaGAACTGGCAAATTACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVTDRNG*NWQITL Trigger: TAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGT...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR CCA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTTTTTCTAAAATGGTCTaGTCTCTCTGCTGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFFSKMV*SLCCKR Trigger: TCTCTTACAGCAGAGAGACCAGACCATTTTAGAAAA...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 39% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTTTTTCTAAAATGGTCTaGTCTCTCTGCTGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVFSKMV*SLCCKR Trigger: TCTCTTACAGCAGAGAGACCAGACCATTTTAGAAAA...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR CCA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGTCCACAGTTTCTTTGTaGGCTTTTTCCATACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLSTVSL*AFSILF Trigger: GAACAGTATGGAAAAAGCCCACAAAGAAACTGTGGA...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CCA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACAGAAATGGATGCAACTaGCAAATTACCTTACTAATG | + |
|
Preference number: 4 (lower is better) Translates to: RATDRNGCNWQITLLMAHRNGCN*QITLLM Trigger: CATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCT...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR TCA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATTTGACTCTTGGTACTaGAAGTCTGCCTTTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSFDSWY*KSAFSS Trigger: TGAACTAAAGGCAGACTTTCAGTACCAAGAGTCAAA...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR TCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTTTGACTCTTGGTACTaGAAGTCTGCCTTTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSETIPTLLLHVAFHKEHFDSWY*KSAFSS Trigger: TGAACTAAAGGCAGACTTTCAGTACCAAGAGTCAAA...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR TCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAATCTCTGTTTTTGGCCTaGAGTTGTTCCACAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSISIVYTCEQLNRFTAESLFLA*SCSTVS Trigger: AGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGA...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR CCA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATCCACAGTTTCTTTGTaGGCTTTTTCCATACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSSTVSL*AFSILF Trigger: GAACAGTATGGAAAAAGCCCACAAAGAAACTGTGGA...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAAGTAGTTCTCTGTTTTTaGCCTGAAGTTGTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YSISIVYTCEQLNRFTAEVVLCF*PEVVPQ Trigger: CTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR CCA 90 bp | AAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGTAGTTCTCTGTTTTTaGCCTGAAGTTGTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KPYLLYYCMLRFIKSTTHVVLCF*PEVVPQ Trigger: CTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC...ATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACGCTATCTCCATTAGATaGCTTAGATTCCAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSETIPTLLLHVAFHKEHAISIR*LRFQFG Trigger: CCCAAATTGGAATCTAAGCCATCTAATGGAGATAGC...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536839.1 |
||
| CDS-3UTR TCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAACCACTATCTGCTGACTaGTTTATAGAGCTACTATCT | + |
|
Preference number: 4 (lower is better) Translates to: YSISIVYTCEQLNRFTAEPLSAD*FIELLS Trigger: AGATAGTAGCTCTATAAATCAGTCAGCAGATAGTGG...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358780.10 |
||
| CDS-3UTR CCA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAATCCACAGTTTCTTTGTaGGCTTTTTCCATACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSISIVYTCEQLNRFTAESTVSL*AFSILF Trigger: GAACAGTATGGAAAAAGCCCACAAAGAAACTGTGGA...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR CCA 90 bp | AAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATACTATCTCCATTAGATaGCTTAGATTCCAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPYLLYYCMLRFIKSTTHTISIR*LRFQFG Trigger: CCCAAATTGGAATCTAAGCCATCTAATGGAGATAGT...ATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358780.10 |
||
| CDS-3UTR CCA 90 bp | AAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATTTTTCTAAAATGGTCTaGTCTCTCTGCTGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPYLLYYCMLRFIKSTTHFSKMV*SLCCKR Trigger: TCTCTTACAGCAGAGAGACCAGACCATTTTAGAAAA...ATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACAGAAATGGATGCAACTaGCAAATTACCTTACTAATG | + |
|
Preference number: 4 (lower is better) Translates to: TSETIPTLLLHVAFHKEHRNGCN*QITLLM Trigger: CATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCT...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398187.6 |
||
| CDS GCA 90 bp | GGCCCTGGGAGAGCTCCTCGAAAGGATAACGCTGGGTACACTTGGTaGAGGCGTACAGGGCCGAGGCCGCCATCCTGCTCCTCAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPGRAPRKDNAGYTW*RRTGPRPPSCSSVS Trigger: GGAGACTGAGGAGCAGGATGGCGGCCTCGGCCCTGTACGCCTGCACCAAGTGTACCCAGCGTTATCCTTTCGAGGAGCTCTCCCAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 ENST00000538316.1 ENST00000543641.5 ENST00000545654.5 |
||
| CDS GCA 90 bp | GAAGGATGCCATCAGCTTTGCGGCTTCGGGTTCCTAGCAAGAAAGTaGAAAAACCGTCCCCTGCCTCCTGGTGGAAGAAGAGGACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: EGCHQLCGFGFLARK*KNRPLPPGGRRGQT Trigger: GGTCTGTCCTCTTCTTCCACCAGGAGGCAGGGGACGGTTTTTGCACTTTCTTGCTAGGAACCCGAAGCCGCAAAGCTGATGGCATCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538047.5 ENST00000545654.5 |
||
| CDS GCA 90 bp | AGTCGCTTCGCTTTCCTGGACAGGGAAGAAGGATGCCATCAGCTTTaGGGCTTCGGGTTCCTAGCAAGAAAGTGCAAAAACCGTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRFAFLDREEGCHQL*GFGFLARKCKNRPL Trigger: CAGGGGACGGTTTTTGCACTTTCTTGCTAGGAACCCGAAGCCGCAAAGCTGATGGCATCCTTCTTCCCTGTCCAGGAAAGCGAAGCGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538047.5 ENST00000545654.5 |
||
| CDS CCA 90 bp | TCCAAATCAGAGCATTCTGTTCCCAAACCAGTCGCTTCGCTTTCCTaGACAGGGAAGAAGGATGCCATCAGCTTTGCGGCTTCGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKSEHSVPKPVASLS*TGKKDAISFAASGS Trigger: GGAACCCGAAGCCGCAAAGCTGATGGCATCCTTCTTCCCTGTCCAGGAAAGCGAAGCGACTGGTTTGGGAACAGAATGCTCTGATTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538047.5 ENST00000545654.5 |
||
| CDS GCA 90 bp | TGTTCCCAAACCAGTCGCTTCGCTTTCCTGGACAGGGAAGAAGGATaGCATCAGCTTTGCGGCTTCGGGTTCCTAGCAAGAAAGTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CSQTSRFAFLDREEG*HQLCGFGFLARKCK Trigger: TTTGCACTTTCTTGCTAGGAACCCGAAGCCGCAAAGCTGATGGCATCCTTCTTCCCTGTCCAGGAAAGCGAAGCGACTGGTTTGGGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538047.5 ENST00000545654.5 |
||
| CDS CCA 90 bp | TCCGACATTCCGTTGCTCACAGACAGCATCCAGGCTTTAATGGGATaGGAGGAGCTCCAAATCAGAGCATTCTGTTCCCAAACCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SDIPLLTDSIQALMG*EELQIRAFCSQTSR Trigger: GCGACTGGTTTGGGAACAGAATGCTCTGATTTGGAGCTCCTCCCATCCCATTAAAGCCTGGATGCTGTCTGTGAGCAACGGAATGTCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538316.1 |
||
| CDS CCA 90 bp | GGATGTGCAATCCGACATTCAGACAGCATCCAGGCTTTAATGGGATaGGAGGAGCTCCAAATCAGAGCATTCTGTTCCCAAACCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GCAIRHSDSIQALMG*EELQIRAFCSQTSR Trigger: GCGACTGGTTTGGGAACAGAATGCTCTGATTTGGAGCTCCTCCCATCCCATTAAAGCCTGGATGCTGTCTGAATGTCGGATTGCACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538047.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACGAAGCGGGTAGGGGGTaGCTGTTTAGCTGTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RATDRNGCNWQITLLMAHEAGRG*LFSCAA Trigger: GGCCGCACAGCTAAACAGCAACCCCCTACCCGCTTC...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543641.5 |
||
| CDS CCA 90 bp | TATTTTGCACCGTTGCTCACAGACAGCATCCAGGCTTTAATGGGATaGGAGGAGCTCCAAATCAGAGCATTCTGTTCCCAAACCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: YFAPLLTDSIQALMG*EELQIRAFCSQTSR Trigger: GCGACTGGTTTGGGAACAGAATGCTCTGATTTGGAGCTCCTCCCATCCCATTAAAGCCTGGATGCTGTCTGTGAGCAACGGTGCAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545654.5 |
||
| CDS CCA 90 bp | GAGGCAAATTCACGCTCTCTCCGGCGTTTAATCCGAGGGAACTCGTaGAGTGCTTTAACTTCGCCTTCGCTTTTGTTTTATCTCCATTAC | + |
|
Preference number: 5 (lower is better) Translates to: EANSRSLRRLIRGNS*SALTSPSLLFYLHY Trigger: GTAATGGAGATAAAACAAAAGCGAAGGCGAAGTTAAAGCACTCCACGAGTTCCCTCGGATTAAACGCCGGAGAGAGCGTGAATTTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540054.5 |
||
| CDS-3UTR CAA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCAGAAGCGGGTAGGGGGTaGCTGTTTAGCTGTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSEAGRG*LFSCAA Trigger: GGCCGCACAGCTAAACAGCAACCCCCTACCCGCTTC...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358780.10 |
||
| CDS GCA 90 bp | AAATTCACGCTCTCTCCGGCGTTTAATCCGAGGGAACTCGTGGAGTaGTTTAACTTCGCCTTCGCTTTTGTTTTATCTCCATTACTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KFTLSPAFNPRELVE*FNFAFAFVLSPLLP Trigger: AGGGAGTAATGGAGATAAAACAAAAGCGAAGGCGAAGTTAAAGCACTCCACGAGTTCCCTCGGATTAAACGCCGGAGAGAGCGTGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540054.5 |
||
| CDS-3UTR CAA 90 bp | CCCAAATTGCTTCACATTTTGAGCACACTTCTTACAAATTGTGTTAGTTTTGCTGTCGCTTCGCTTTCCTaGCAGAGCTGCTGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PKLLHILSTLLTNCVSFAVASLS*QSCWPW Trigger: CCAGGGCCAGCAGCTCTGCAAGGAAAGCGAAGCGAC...AGCAAAACTAACACAATTTGTAAGAAGTGTGCTCAAAATGTGAAGCAATTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538316.1 |
||
| CDS-3UTR CAA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACCTTGGGCGTCCCAAATaGCTTCACATTTTGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RATDRNGCNWQITLLMAHLGRPK*LHILST Trigger: TGTGCTCAAAATGTGAAGCAATTTGGGACGCCCAAG...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACAATGCTGCGACCTGTTaGAGTAGTTCTCTGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RATDRNGCNWQITLLMAHNAATC*SSSLFL Trigger: CAAAAACAGAGAACTACTCAAACAGGTCGCAGCATT...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCTACTGACAGAAATGGATGCAACTGGCAAATTACCTTACTAATGGCACACCTTATAAGGACAAAATaGTCTGTTCCCCCACTATCT | + |
|
Preference number: 5 (lower is better) Translates to: RATDRNGCNWQITLLMAHLIRTK*SVPPLS Trigger: AGATAGTGGGGGAACAGACAATTTTGTCCTTATAAG...GTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR CAA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAACTTGGGCGTCCCAAATaGCTTCACATTTTGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: YSISIVYTCEQLNRFTAELGRPK*LHILST Trigger: TGTGCTCAAAATGTGAAGCAATTTGGGACGCCCAAG...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
||
| CDS-3UTR CAA 90 bp | AAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATCTTGGGCGTCCCAAATaGCTTCACATTTTGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: KPYLLYYCMLRFIKSTTHLGRPK*LHILST Trigger: TGTGCTCAAAATGTGAAGCAATTTGGGACGCCCAAG...ATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
||
| CDS-3UTR CAA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTGAGTTTCATTCTGAATaGTTGCAGAGGATTTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFEFHSE*LQRIYG Trigger: GCCATAAATCCTCTGCAACAATTCAGAATGAAACTC...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR CAA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCTTATAAGGACAAAATaGTCTGTTCCCCCACTATCT | + |
|
Preference number: 5 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFLIRTK*SVPPLS Trigger: AGATAGTGGGGGAACAGACAATTTTGTCCTTATAAG...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTGAAATATTGGATCCTTaGATAATGCTGCGACCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVEILDP*IMLRPV Trigger: AACAGGTCGCAGCATTATCAAAGGATCCAATATTTC...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000543641.5 |
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| CDS-3UTR CAA 90 bp | GTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACTGTTTTTCATTCTGAATTGTaGCAGAGGATTTATGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: VFGLKLFHSFFVGFFHTVFHSEL*QRIYGS Trigger: AGAGCCATAAATCCTCTGCAACAATTCAGAATGAAA...AACAGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS-3UTR CAA 90 bp | GTAGTTCTCTGTTTTTGGCCTGAAGTTGTTCCACAGTTTCTTTGTGGGCTTTTTTTTCATTCTGAATTGTaGCAGAGGATTTATGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVLCFWPEVVPQFLCGLFFHSEL*QRIYGS Trigger: AGAGCCATAAATCCTCTGCAACAATTCAGAATGAAA...AAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGCCAAAAACAGAGAACTAC 39% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS-3UTR CAA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGCTTATAAGGACAAAATaGTCTGTTCCCCCACTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLLIRTK*SVPPLS Trigger: AGATAGTGGGGGAACAGACAATTTTGTCCTTATAAG...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS-3UTR CAA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACAATGCTGCGACCTGTTaGAGTAGTTCTCTGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TSETIPTLLLHVAFHKEHNAATC*SSSLFL Trigger: CAAAAACAGAGAACTACTCAAACAGGTCGCAGCATT...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS-3UTR CAA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCAAATGCTGCGACCTGTTaGAGTAGTTCTCTGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSNAATC*SSSLFL Trigger: CAAAAACAGAGAACTACTCAAACAGGTCGCAGCATT...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS CCA 90 bp | CCTATCTCCATTAGATGGCTTAGATTCCAATTTGGGCTTTTTCTTTaGAGTTTCATTCTGAATTGTTGCAGAGGATTTATGGCTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PISIRWLRFQFGLFL*SFILNCCRGFMALF Trigger: AAACAGAGCCATAAATCCTCTGCAACAATTCAGAATGAAACTCCAAAGAAAAAGCCCAAATTGGAATCTAAGCCATCTAATGGAGATAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000398187.6 ENST00000535919.1 ENST00000543641.5 ENST00000545654.5 |
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| CDS CCA 90 bp | GCTATCTCCATTAGATGGCTTAGATTCCAATTTGGGCTTTTTCTTTaGAGTTTCATTCTGAATTGTTGCAGAGGATTTATGGCTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AISIRWLRFQFGLFL*SFILNCCRGFMALF Trigger: AAACAGAGCCATAAATCCTCTGCAACAATTCAGAATGAAACTCCAAAGAAAAAGCCCAAATTGGAATCTAAGCCATCTAATGGAGATAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536839.1 |
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| CDS-3UTR CAA 90 bp | TTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGCACTCCTTTACAACTGTTTCATTCTGAATTGTaGCAGAGGATTTATGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLHVAFHKEHYSCTPLQLFHSEL*QRIYGS Trigger: AGAGCCATAAATCCTCTGCAACAATTCAGAATGAAA...CAGTTGTAAAGGAGTGCATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS-3UTR CAA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCAGAGTTTCATTCTGAATaGTTGCAGAGGATTTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSEFHSE*LQRIYG Trigger: GCCATAAATCCTCTGCAACAATTCAGAATGAAACTC...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS-3UTR CAA 90 bp | GAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCACTTATAAGGACAAAATaGTCTGTTCCCCCACTATCT | + |
|
Preference number: 5 (lower is better) Translates to: ETIPTLLLHVAFHKEHYSLIRTK*SVPPLS Trigger: AGATAGTGGGGGAACAGACAATTTTGTCCTTATAAG...TGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS-3UTR CAA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAAAATGCTGCGACCTGTTaGAGTAGTTCTCTGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YSISIVYTCEQLNRFTAENAATC*SSSLFL Trigger: CAAAAACAGAGAACTACTCAAACAGGTCGCAGCATT...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
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| CDS CCA 90 bp | ACTATCTCCATTAGATGGCTTAGATTCCAATTTGGGCTTTTTCTTTaGAGTTTCATTCTGAATTGTTGCAGAGGATTTATGGCTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TISIRWLRFQFGLFL*SFILNCCRGFMALF Trigger: AAACAGAGCCATAAATCCTCTGCAACAATTCAGAATGAAACTCCAAAGAAAAAGCCCAAATTGGAATCTAAGCCATCTAATGGAGATAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358780.10 |
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| CDS-3UTR CAA 90 bp | AAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATGAGTTTCATTCTGAATaGTTGCAGAGGATTTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPYLLYYCMLRFIKSTTHEFHSE*LQRIYG Trigger: GCCATAAATCCTCTGCAACAATTCAGAATGAAACTC...ATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS-3UTR CAA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAAGAGTTTCATTCTGAATaGTTGCAGAGGATTTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: YSISIVYTCEQLNRFTAEEFHSE*LQRIYG Trigger: GCCATAAATCCTCTGCAACAATTCAGAATGAAACTC...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
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| CDS-3UTR CAA 90 bp | ACTTCTGAAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACCTCTATTATTGCATGTaGCGTTTCATAAAGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: TSETIPTLLLHVAFHKEHLYYCM*RFIKST Trigger: AGTGCTCTTTATGAAACGCAACATGCAATAATAGAG...GTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTTCAGAAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS CCA 90 bp | TATTACAGACAAATTAAGAAAGCTGTCAGGGCCTATTTCAAGGATTaGTTAAATGTGAAACTACTTATTATTTTGCACCGTTGCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: YYRQIKKAVRAYFKD*LNVKLLIILHRCSQ Trigger: CTGTGAGCAACGGTGCAAAATAATAAGTAGTTTCACATTTAACCAATCCTTGAAATAGGCCCTGACAGCTTTCTTAATTTGTCTGTAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545654.5 |
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| CDS-3UTR CAA 90 bp | TACAGTATTTCAATAGTCTATACATGTGAACAGCTTAACAGGTTCACTGCAGAATTTCATTCTGAATTGTaGCAGAGGATTTATGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YSISIVYTCEQLNRFTAEFHSEL*QRIYGS Trigger: AGAGCCATAAATCCTCTGCAACAATTCAGAATGAAA...TTCTGCAGTGAACCTGTTAAGCTGTTCACATGTATAGACTATTGAAATACTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358780.10 ENST00000398187.6 |
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| CDS-3UTR CAA 90 bp | AAACCATACCTACTCTATTATTGCATGTTGCGTTTCATAAAGAGCACTACTCATCTCTATTATTGCATGTaGCGTTTCATAAAGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KPYLLYYCMLRFIKSTTHLYYCM*RFIKST Trigger: AGTGCTCTTTATGAAACGCAACATGCAATAATAGAG...ATGAGTAGTGCTCTTTATGAAACGCAACATGCAATAATAGAGTAGGTATGGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 |
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| CDS CAA 72 bp | CCGATAGCGGCGGAGGGAGACGAAGCGGGTAGGGGGTaGCTGTTTAGCTGTGCGGCCGTGGATCCGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PIAAEGDEAGRG*LFSCAAVDPLP Trigger: AGGAAGCGGATCCACGGCCGCACAGCTAAACAGCAACCCCCTACCCGCTTCGTCTCCCTCCGCCGCTATCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000542135.5 ENST00000543641.5 |
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| CDS GCA 72 bp | AGAGCTCCTCGAAAGGATAACGCTGGGTACACTTGGTaGAGGCGTACAGGGCCGAGGCCGCCATCCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RAPRKDNAGYTW*RRTGPRPPSCS Trigger: GGAGCAGGATGGCGGCCTCGGCCCTGTACGCCTGCACCAAGTGTACCCAGCGTTATCCTTTCGAGGAGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000358780.10 ENST00000398187.6 ENST00000536839.1 ENST00000538316.1 ENST00000543641.5 ENST00000545654.5 |
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| CDS GCA 72 bp | GCACCCTCCTGGGCCGCCTGGAAAAGGGCACGATTCTaGCTCCCTTTCAGGGTCCGTTCCCAGCTAATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: APSWAAWKRARF*LPFRVRSQLMF Trigger: GAACATTAGCTGGGAACGGACCCTGAAAGGGAGGCAGAATCGTGCCCTTTTCCAGGCGGCCCAGGAGGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545654.5 |
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| CDS CAA 90 bp | CAGTCGCTTCGCTTTCCTGGACAGGGAAGAAGGATGCCATCAGCTTaGCGGCTTCGGGTTCCTAGCAAGAAAGTGCAAAAACCGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QSLRFPGQGRRMPSA*RLRVPSKKVQKPSP Trigger: AGGGGACGGTTTTTGCACTTTCTTGCTAGGAACCCGAAGCCGCAAAGCTGATGGCATCCTTCTTCCCTGTCCAGGAAAGCGAAGCGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538047.5 ENST00000545654.5 |
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| CDS GCA 72 bp | CATCAGCTTTGCGGCTTCGGGTTCCTAGCAAGAAAGTaGAAAAACCGTCCCCTGCCTCCTGGTGGAAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: HQLCGFGFLARK*KNRPLPPGGRR Trigger: TCTTCTTCCACCAGGAGGCAGGGGACGGTTTTTGCACTTTCTTGCTAGGAACCCGAAGCCGCAAAGCTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538047.5 ENST00000545654.5 |
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| CDS CCA 72 bp | GAGCATTCTGTTCCCAAACCAGTCGCTTCGCTTTCCTaGACAGGGAAGAAGGATGCCATCAGCTTTGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EHSVPKPVASLS*TGKKDAISFAA Trigger: AGCCGCAAAGCTGATGGCATCCTTCTTCCCTGTCCAGGAAAGCGAAGCGACTGGTTTGGGAACAGAATGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538047.5 ENST00000545654.5 |
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| CDS CCA 72 bp | CCGTTGCTCACAGACAGCATCCAGGCTTTAATGGGATaGGAGGAGCTCCAAATCAGAGCATTCTGTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PLLTDSIQALMG*EELQIRAFCSQ Trigger: TTGGGAACAGAATGCTCTGATTTGGAGCTCCTCCCATCCCATTAAAGCCTGGATGCTGTCTGTGAGCAACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538316.1 ENST00000545654.5 |
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| CDS CAA 90 bp | TTAACTTCGCCTTCGCTTTTGTTTTATCTCCATTACTCCCTTCAGTaGCCACTGGCGACACCACTACTCGCCCACGCTTCTTACTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTSPSLLFYLHYSLQ*PLATPLLAHASYWR Trigger: CCTCCAGTAAGAAGCGTGGGCGAGTAGTGGTGTCGCCAGTGGCAACTGAAGGGAGTAATGGAGATAAAACAAAAGCGAAGGCGAAGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540054.5 |
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| CDS GCA 72 bp | CTCTCTCCGGCGTTTAATCCGAGGGAACTCGTGGAGTaGTTTAACTTCGCCTTCGCTTTTGTTTTATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSPAFNPRELVE*FNFAFAFVLSP Trigger: TGGAGATAAAACAAAAGCGAAGGCGAAGTTAAAGCACTCCACGAGTTCCCTCGGATTAAACGCCGGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540054.5 |
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| CDS CCA 72 bp | TCACGCTCTCTCCGGCGTTTAATCCGAGGGAACTCGTaGAGTGCTTTAACTTCGCCTTCGCTTTTGTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: SRSLRRLIRGNS*SALTSPSLLFY Trigger: ATAAAACAAAAGCGAAGGCGAAGTTAAAGCACTCCACGAGTTCCCTCGGATTAAACGCCGGAGAGAGCGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540054.5 |
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| CDS CCA 72 bp | ATCCGACATTCAGACAGCATCCAGGCTTTAATGGGATaGGAGGAGCTCCAAATCAGAGCATTCTGTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IRHSDSIQALMG*EELQIRAFCSQ Trigger: TTGGGAACAGAATGCTCTGATTTGGAGCTCCTCCCATCCCATTAAAGCCTGGATGCTGTCTGAATGTCGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538047.5 |
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| CDS TCA 72 bp | AGGACAAAATTGTCTGTTCCCCCACTATCTGCTGACTaGTTTATAGAGCTGACAGAAATGGATGCAACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RTKLSVPPLSAD*FIELTEMDATG Trigger: GCCAGTTGCATCCATTTCTGTCAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000545654.5 |
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| CDS CAA 90 bp | TTTCAAGGATTGGTTAAATGTGAAACTACTTATTATTTTGCACCGTaGCTCACAGACAGCATCCAGGCTTTAATGGGATGGGAGGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FQGLVKCETTYYFAP*LTDSIQALMGWEEL Trigger: GAGCTCCTCCCATCCCATTAAAGCCTGGATGCTGTCTGTGAGCAACGGTGCAAAATAATAAGTAGTTTCACATTTAACCAATCCTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545654.5 |
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| CDS TCA 72 bp | AGGACAAAATTGTCTGTTCCCCCACTATCTGCTGACTaGTTTATAGAGCTACTATCTCCATTAGATGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RTKLSVPPLSAD*FIELLSPLDGL Trigger: TAAGCCATCTAATGGAGATAGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358780.10 |
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| CDS TCA 72 bp | AGGACAAAATTGTCTGTTCCCCCACTATCTGCTGACTaGTTTATAGAGCTATCTCCATTAGATGGCTTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RTKLSVPPLSAD*FIELSPLDGLD Trigger: ATCTAAGCCATCTAATGGAGATAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000536839.1 |
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| CDS TCA 72 bp | TATAAGGACAAAATTGTCTGTTCCCCCACTATCTGCTaGCTGATTTATAGAGCTGACAGAAATGGATGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: YKDKIVCSPTIC*LIYRADRNGCN Trigger: GTTGCATCCATTTCTGTCAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000545654.5 |
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| CDS CAA 72 bp | TTGGTTAAATGTGAAACTACTTATTATTTTGCACCGTaGCTCACAGACAGCATCCAGGCTTTAATGGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: LVKCETTYYFAP*LTDSIQALMGW Trigger: CCATCCCATTAAAGCCTGGATGCTGTCTGTGAGCAACGGTGCAAAATAATAAGTAGTTTCACATTTAACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545654.5 |
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| CDS CAA 72 bp | TCACAATATAATTCCTTAGGGAAGGCACAGGTGTCTTaGTCTTTAGTAGACGTGGGGGTATATTACAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: SQYNSLGKAQVS*SLVDVGVYYRQ Trigger: TTGTCTGTAATATACCCCCACGTCTACTAAAGACAAAGACACCTGTGCCTTCCCTAAGGAATTATATTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000545654.5 |
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| CDS TCA 72 bp | TATAAGGACAAAATTGTCTGTTCCCCCACTATCTGCTaGCTGATTTATAGAGCTACTATCTCCATTAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: YKDKIVCSPTIC*LIYRATISIRW Trigger: CCATCTAATGGAGATAGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358780.10 |
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| CDS TCA 72 bp | TATAAGGACAAAATTGTCTGTTCCCCCACTATCTGCTaGCTGATTTATAGAGCTATCTCCATTAGATGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: YKDKIVCSPTIC*LIYRAISIRWL Trigger: AAGCCATCTAATGGAGATAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000536839.1 |
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| CDS CCA 72 bp | CTGATTTATAGAGCTACTGACAGAAATGGATGCAACTaGCAAATTACCTTACTAATGGCACACATTACATAC | + |
|
Preference number: 6 (lower is better) Translates to: LIYRATDRNGCN*QITLLMAHITY Trigger: GTATGTAATGTGTGCCATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGTAGCTCTATAAATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398187.6 ENST00000543641.5 |
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| CDS CAA 72 bp | CTATCATTTTACGTAAATGATGGTAGTTACCTGAAGTaGTTCCACAGTTTCTTTGTGGGCTTTTTCCATACT | + |
|
Preference number: 6 (lower is better) Translates to: LSFYVNDGSYLK*FHSFFVGFFHT Trigger: AGTATGGAAAAAGCCCACAAAGAAACTGTGGAACAACTTCAGGTAACTACCATCATTTACGTAAAATGATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541418.1 |
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