RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM53C (Homo sapiens)

Ensembl gene IDs: ENSG00000120709

Ensembl transcript IDs: ENST00000239906.10, ENST00000434981.6, ENST00000505136.1, ENST00000505768.1, ENST00000506710.1, ENST00000507506.5, ENST00000511024.5, ENST00000511276.1, ENST00000511595.5, ENST00000512180.5, ENST00000513056.5

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTCCAGCTGCCCTaGGTCGGAGCCCTCCACTCACCCCCATTCCCAGGCTCGGCCCCC +
Preference number: 1 (lower is better)
Translates to: LAWSSLLEREDFQLP*VGALHSPPFPGSAP
Trigger: GGGGGCCGAGCCTGGGAATGGGGGTGAGTGGAGGGCTCCGACTCAGGGCAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 90 bp GTCTCTTGGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTCCAGCTaGCCTGAGTCGGAGCCCTCCACTCACCCCCATTCCCAGGCTCGG +
Preference number: 1 (lower is better)
Translates to: VSWHGRACWSEKISS*PESEPSTHPHSQAR
Trigger: CCGAGCCTGGGAATGGGGGTGAGTGGAGGGCTCCGACTCAGGGCAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 90 bp GCTCCGTTTATCTTGTCCCGGCCAGTCTCTTGGCATGGTCGAGCTTaGTGGAGCGAGAAGATTTCCAGCTGCCCTGAGTCGGAGCCCTCC +
Preference number: 1 (lower is better)
Translates to: APFILSRPVSWHGRA*WSEKISSCPESEPS
Trigger: GGAGGGCTCCGACTCAGGGCAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAGATAAACGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 90 bp TCCCTCCCGCCACCAGCTCCGTTTATCTTGTCCCGGCCAGTCTCTTaGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTCCAGCTGCCCT +
Preference number: 1 (lower is better)
Translates to: SLPPPAPFILSRPVS*HGRACWSEKISSCP
Trigger: AGGGCAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGGTGGCGGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 90 bp CCGTTTATCTTGTCCCGGCCAGTCTCTTGGCATGGTCGAGCTTGCTaGAGCGAGAAGATTTCCAGCTGCCCTGAGTCGGAGCCCTCCACT +
Preference number: 1 (lower is better)
Translates to: PFILSRPVSWHGRAC*SEKISSCPESEPST
Trigger: AGTGGAGGGCTCCGACTCAGGGCAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAGATAAACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR TCA 90 bp ACCTACTGGCCAACCACACTACACACACAGCACAGATGCAGACATTaGCCCAGTGTCAGCCACATGCCCTGGAGGTGTGCTCCACTCTGG +
Preference number: 1 (lower is better)
Translates to: TYWPTTLHTQHRCRH*PSVSHMPWRCAPLW
Trigger: CCAGAGTGGAGCACACCTCCAGGGCATGTGGCTGACACTGGGTCAATGTCTGCATCTGTGCTGTGTGTGTAGTGTGGTTGGCCAGTAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 90 bp AAGGGTCCCATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTaGTTCAGTTGCCCATGTGCTGTGTGCAACTCTACTCAAGAGGGC +
Preference number: 1 (lower is better)
Translates to: KGPISRGERERAPQP*FSCPCAVCNSTQEG
Trigger: GCCCTCTTGAGTAGAGTTGCACACAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATGGGACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR TCA 90 bp AAGAATTGGTTTCCTGCAGTCACCTTCCCAACAGCAGTGCTGGGGTaGGCTCACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGC +
Preference number: 1 (lower is better)
Translates to: KNWFPAVTFPTAVLG*AHPCLLGTECHFCC
Trigger: GCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTGAGCTCACCCCAGCACTGCTGTTGGGAAGGTGACTGCAGGAAACCAATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 90 bp AGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTTGCCCATGTaGTGTGTGCAACTCTACTCAAGAGGGCAAAAGAGGCAGGTGGAA +
Preference number: 1 (lower is better)
Translates to: RRERESPSTLLQLPM*CVQLYSRGQKRQVE
Trigger: TTCCACCTGCCTCTTTTGCCCTCTTGAGTAGAGTTGCACACAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 90 bp ATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTTaGCCATGTGCTGTGTGCAACTCTACTCAAGAGGGCAAAAGAGGC +
Preference number: 1 (lower is better)
Translates to: ISRGERERAPQPCFS*PCAVCNSTQEGKRG
Trigger: GCCTCTTTTGCCCTCTTGAGTAGAGTTGCACACAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 90 bp TTTCCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTaGCCACTTGGACCAGCTGTCCTGGCTCAAGTTGCGGGTGAGAAA +
Preference number: 1 (lower is better)
Translates to: FPLVPALPRYLNPSL*PLGPAVLAQVAGEK
Trigger: TTTCTCACCCGCAACTTGAGCCAGGACAGCTGGTCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 90 bp CAGCTTAGGGCCTACAGAAACTCACTGGCATTGCCAGTAACCTGTTaGAAGCTGGCACAGCCAATCTACAGCAGAGAGCCCTGGGATGAG +
Preference number: 1 (lower is better)
Translates to: QLRAYRNSLALPVTC*KLAQPIYSREPWDE
Trigger: CTCATCCCAGGGCTCTCTGCTGTAGATTGGCTGTGCCAGCTTCCAACAGGTTACTGGCAATGCCAGTGAGTTTCTGTAGGCCCTAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 90 bp AGAGAGAGAGCCCCTCAACCCTGCTTCAGTTGCCCATGTGCTGTGTaGAACTCTACTCAAGAGGGCAAAAGAGGCAGGTGGAATATAGCC +
Preference number: 1 (lower is better)
Translates to: RERAPQPCFSCPCAV*NSTQEGKRGRWNIA
Trigger: GGCTATATTCCACCTGCCTCTTTTGCCCTCTTGAGTAGAGTTGCACACAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 90 bp GATCTTGTAAGAATTGGTTTCCTGCAGTCACCTTCCCAACAGCAGTaGTGGGGTGAGCTCACCCATGTCTGCTGGGGACTGAATGCCACT +
Preference number: 1 (lower is better)
Translates to: DLVRIGFLQSPSQQQ*WGELTHVCWGLNAT
Trigger: AGTGGCATTCAGTCCCCAGCAGACATGGGTGAGCTCACCCCAGCACTGCTGTTGGGAAGGTGACTGCAGGAAACCAATTCTTACAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 90 bp CTTGTAAGAATTGGTTTCCTGCAGTCACCTTCCCAACAGCAGTGCTaGGGTGAGCTCACCCATGTCTGCTGGGGACTGAATGCCACTTCT +
Preference number: 1 (lower is better)
Translates to: LVRIGFLQSPSQQQC*GELTHVCWGLNATS
Trigger: AGAAGTGGCATTCAGTCCCCAGCAGACATGGGTGAGCTCACCCCAGCACTGCTGTTGGGAAGGTGACTGCAGGAAACCAATTCTTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 90 bp GCAGGGTCTAACCACAGCTGGATAAAACCTCACAAGCTATTGTGGTaGCAGCTTCAGTATGTGTTTCCACTGGTGCCAGCCCTACCAAGG +
Preference number: 1 (lower is better)
Translates to: AGSNHSWIKPHKLLW*QLQYVFPLVPALPR
Trigger: CCTTGGTAGGGCTGGCACCAGTGGAAACACATACTGAAGCTGCCACCACAATAGCTTGTGAGGTTTTATCCAGCTGTGGTTAGACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 90 bp CATGCAGGGTCTAACCACAGCTGGATAAAACCTCACAAGCTATTGTaGTGGCAGCTTCAGTATGTGTTTCCACTGGTGCCAGCCCTACCA +
Preference number: 1 (lower is better)
Translates to: HAGSNHSWIKPHKLL*WQLQYVFPLVPALP
Trigger: TGGTAGGGCTGGCACCAGTGGAAACACATACTGAAGCTGCCACCACAATAGCTTGTGAGGTTTTATCCAGCTGTGGTTAGACCCTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 90 bp TGGAGTGGAGACGAGGAGGCTGAAGCCTCACTGATGCTCCTGACATaGAGGAGATCCAGAAAATGTCAGGTTCAATTCCATGAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: WSGDEEAEASLMLLT*RRSRKCQVQFHEEE
Trigger: TTCTTCCTCATGGAATTGAACCTGACATTTTCTGGATCTCCTGCATGTCAGGAGCATCAGTGAGGCTTCAGCCTCCTCGTCTCCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 90 bp TCAAGATCCTGGGGGTATCATGATACTCTGCTGTTAAGGAGCAATTaGCTTCCTTCCCTAAGGCTACGCAAACACACCTTTCCACAAGTA +
Preference number: 1 (lower is better)
Translates to: SRSWGYHDTLLLRSN*LPSLRLRKHTFPQV
Trigger: TACTTGTGGAAAGGTGTGTTTGCGTAGCCTTAGGGAAGGAAGGCAATTGCTCCTTAACAGCAGAGTATCATGATACCCCCAGGATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 90 bp AAACAAGGGCAGGTCAAATTTGGTCATGCAGGGTCTAACCACAGCTaGATAAAACCTCACAAGCTATTGTGGTGGCAGCTTCAGTATGTG +
Preference number: 1 (lower is better)
Translates to: KQGQVKFGHAGSNHS*IKPHKLLWWQLQYV
Trigger: CACATACTGAAGCTGCCACCACAATAGCTTGTGAGGTTTTATCCAGCTGTGGTTAGACCCTGCATGACCAAATTTGACCTGCCCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR TCA 90 bp TTCCTCCCTTACATGAGGAACTGGGTCCTAGGAAACCCTGGAAATTaGAGAGAAAAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAA +
Preference number: 1 (lower is better)
Translates to: FLPYMRNWVLGNPGN*REKCPSCHKQGQVK
Trigger: TTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTCTCTTCAATTTCCAGGGTTTCCTAGGACCCAGTTCCTCATGTAAGGGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR TCA 90 bp GCTCCTGACATGCAGGAGATCCAGAAAATGTCAGGTTCAATTCCATaGGGAAGAAAACACAAAGACCTTGGTCTTCCTCCCTTACATGAG +
Preference number: 1 (lower is better)
Translates to: APDMQEIQKMSGSIP*GRKHKDLGLPPLHE
Trigger: CTCATGTAAGGGAGGAAGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATTTTCTGGATCTCCTGCATGTCAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR TCA 90 bp CACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCACAGCCCCCTCCTCCGGGGGCTACAGGCCATaGACCATGGTGGAGAGATGC +
Preference number: 2 (lower is better)
Translates to: HSVRLLSACRPHRTAPSSGGYRP*TMVERC
Trigger: GCATCTCTCCACCATGGTTCATGGCCTGTAGCCCCC...GGAGGAGGGGGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR-3UTR GCA 90 bp TCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCACAGCCACCATGGTGGAGAGATaGTGCTGCCTTCCCGGGCTG +
Preference number: 2 (lower is better)
Translates to: SRWHSVRLLSACRPHRTATMVER*CCLPGL
Trigger: CAGCCCGGGAAGGCAGCAGCATCTCTCCACCATGGT...GGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR-3UTR CCA 90 bp TCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCACAGCCCTTTCACTCAGCACCTaGGAGGAACCCCCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: SRWHSVRLLSACRPHRTALSLST*EEPPVG
Trigger: CCCCACTGGGGGTTCCTCCCAGGTGCTGAGTGAAAG...GGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR-3UTR GCA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGGGCACAGTGTCCGCTTaGTCAGCGCCTGCCGACCCC +
Preference number: 2 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHEGTVSA*SAPADP
Trigger: GGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCC...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR-3UTR CCA 90 bp GCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCACAGCCCCCTCCTCTCCCGGGCTGTTTCTTaGAGACAAAGACCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: AQCPLAQRLPTPPHSPLLSRAVS*RQRPPE
Trigger: CTCAGGAGGTCTTTGTCTCCAAGAAACAGCCCGGGA...GAGGAGGGGGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR CAA 90 bp GTCCCTCCCGCCACCAGCTCCGTTTATCTTGTCCCGGCCAGTCTCTaGGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTCCAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: VPPATSSVYLVPASL*AWSSLLEREDFQLP
Trigger: GGGCAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGGTGGCGGGAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CCA 90 bp ATTCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCGGAAGCAGAGAGGGGTaGGGGGCTACAGGCCATGAA +
Preference number: 2 (lower is better)
Translates to: IQVQVPKVPLAQCPLAQRGSREG*GATGHE
Trigger: TTCATGGCCTGTAGCCCCCCACCCCTCTCTGCTTCC...GCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR-3UTR CCA 90 bp CCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGATCCCCAAAGTCCCGCTaGCACAGTGTCCGCTTGCTC +
Preference number: 2 (lower is better)
Translates to: PGSAPSLGDSTLVSSHERSPKSR*HSVRLL
Trigger: GAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGA...TCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR-3UTR GCA 90 bp TCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTATGGTGGAGAGATGCTaGTGCCTTCCCGGGCTGTTT +
Preference number: 2 (lower is better)
Translates to: SSPGPQSPAGTVSACSAPMVERC*CLPGLF
Trigger: AAACAGCCCGGGAAGGCAGCAGCATCTCTCCACCAT...AGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR-3UTR CCA 90 bp GGGAAAAGGGTCCCATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCCCGGCCAGTCTCTTaGCATGGTCGAGCTTGCTGG +
Preference number: 2 (lower is better)
Translates to: GKRVPSAEEREREPLNPASRPVS*HGRACW
Trigger: CCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGA...AGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATGGGACCCTTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR GCA 90 bp TTTTCCTCAATCAAATTCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTaGCGACCCCACCGCACAGCC +
Preference number: 2 (lower is better)
Translates to: FSSIKFKSRSPKSRWHSVRLLSA*RPHRTA
Trigger: GGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCG...GACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAATTTGATTGAGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR-3UTR GCA 90 bp GCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTTGCCCATGTGCTGTCCTTCCCTGCCCATTaGTCTCTTGGTGGCAGGGAT +
Preference number: 2 (lower is better)
Translates to: AEEREREPLNPASVAHVLSFPAH*SLGGRD
Trigger: ATCCCTGCCACCAAGAGAGCAATGGGCAGGGAAGGA...CAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR GCA 90 bp ACATCCTCAGCCAATCCCTCAGTGAGCCCCAACCTCCCTATGGTCTCTCAGGCCCTGCTGGGGACTGAATaGCACTTCTGTTGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: TSSANPSVSPNLPMVSQALLGTE*HFCCRS
Trigger: AGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAG...GGCCTGAGAGACCATAGGGAGGTTGGGGCTCACTGAGGGATTGGCTGAGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CCA 90 bp GGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGACAGGCCATGAACCATaGTGGAGAGATGCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: GDSTLVSSHERVSLCGPRTGHEP*WRDAAA
Trigger: GGCAGCAGCATCTCTCCACCATGGTTCATGGCCTGT...CCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR-3UTR TCA 90 bp GGGAAAAGGGTCCCATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTCCTTTGCAGAGTCGGTaGTGCTATGGATTACAAGCC +
Preference number: 2 (lower is better)
Translates to: GKRVPSAEEREREPLNPAPLQSR*CYGLQA
Trigger: GGCTTGTAATCCATAGCATCACCGACTCTGCAAAGG...AGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATGGGACCCTTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR GCA 90 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGCAGGTCTGCCTCAGTAAGAGCCCCTCAACCCTaGTTCAGTTGCCCATGTGCT +
Preference number: 2 (lower is better)
Translates to: HPCLLGTECHFCCRSASVRAPQP*FSCPCA
Trigger: AGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCT...TACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CCA 90 bp GCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTTGCCCATGTGCTGCCATTGCTCTCTTGGTaGCAGGGATACTCACACTCA +
Preference number: 2 (lower is better)
Translates to: AEEREREPLNPASVAHVLPLLSW*QGYSHS
Trigger: TGAGTGTGAGTATCCCTGCCACCAAGAGAGCAATGG...CAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CAA 90 bp CATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTaGCCCATGTGCTGTGTGCAACTCTACTCAAGAGGGCAAAAGAGG +
Preference number: 2 (lower is better)
Translates to: HQQRRERESPSTLLQ*PMCCVQLYSRGQKR
Trigger: CCTCTTTTGCCCTCTTGAGTAGAGTTGCACACAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR TCA 90 bp CAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCAGTCACCGATTTCCAGCTGCCCTaGGTCGGAGCCCTCCACTCA +
Preference number: 2 (lower is better)
Translates to: QVKKAGPGSCKNWFPAVTDFQLP*VGALHS
Trigger: TGAGTGGAGGGCTCCGACTCAGGGCAGCTGGAAATC...GGTGACTGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CCA 90 bp ACATCCTCAGCCAATCCCTCAGTGAGCCCCAACCTCCCTATGGTCTCTCAGGCCCAAATAAACACTTCCTaGCAGGAGTGGAAGACAAGC +
Preference number: 2 (lower is better)
Translates to: TSSANPSVSPNLPMVSQAQINTS*QEWKTS
Trigger: GCTTGTCTTCCACTCCTGCCAGGAAGTGTTTATTTG...GGCCTGAGAGACCATAGGGAGGTTGGGGCTCACTGAGGGATTGGCTGAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR GCA 90 bp CTCAAGCAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCAGAGAAGATTTCCAGCTaGCCTGAGTCGGAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: LKQVKKAGPGSCKNWFPAEKISS*PESEPS
Trigger: GGAGGGCTCCGACTCAGGGCAGCTGGAAATCTTCTC...TGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTGCTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CCA 90 bp CTCAAGCAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCAGCCAGTCTCTTGGCATaGTCGAGCTTGCTGGAGCGA +
Preference number: 2 (lower is better)
Translates to: LKQVKKAGPGSCKNWFPAASLLA*SSLLER
Trigger: TCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGC...TGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTGCTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CAA 90 bp ACTGCCTCACTTCTTCAGCTTAGGGCCTACAGAAACTCACTGGCATaGCCAGTAACCTGTTGGAAGCTGGCACAGCCAATCTACAGCAGA +
Preference number: 2 (lower is better)
Translates to: TASLLQLRAYRNSLA*PVTCWKLAQPIYSR
Trigger: TCTGCTGTAGATTGGCTGTGCCAGCTTCCAACAGGTTACTGGCAATGCCAGTGAGTTTCTGTAGGCCCTAAGCTGAAGAAGTGAGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR GCA 90 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGCAGGTCTGCCTCAGTAAAAAGGAAAACTTGGTaGCCTCCTCTTGACTCCTTG +
Preference number: 2 (lower is better)
Translates to: HPCLLGTECHFCCRSASVKRKTW*PPLDSL
Trigger: CAAGGAGTCAAGAGGAGGGCACCAAGTTTTCCTTTT...TACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR GCA 90 bp ACATCCTCAGCCAATCCCTCAGTGAGCCCCAACCTCCCTATGGTCTCTCAGGCCCAAAATGAAATCCTTTaGAGAGTCGGTGATGCTATG +
Preference number: 2 (lower is better)
Translates to: TSSANPSVSPNLPMVSQAQNEIL*RVGDAM
Trigger: CATAGCATCACCGACTCTGCAAAGGATTTCATTTTG...GGCCTGAGAGACCATAGGGAGGTTGGGGCTCACTGAGGGATTGGCTGAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CAA 90 bp ATTCAATCCAATGACAACCAAACTCCCAACTGCTTCTCACAGCCTTaGCTTTATACATCCTCAGCCAATCCCTCAGTGAGCCCCAACCTC +
Preference number: 2 (lower is better)
Translates to: IQSNDNQTPNCFSQP*LYTSSANPSVSPNL
Trigger: GAGGTTGGGGCTCACTGAGGGATTGGCTGAGGATGTATAAAGCAAAGGCTGTGAGAAGCAGTTGGGAGTTTGGTTGTCATTGGATTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGATATGGATTACAAGCCTaGTTCCAGAGCTATTTAGAA +
Preference number: 2 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGYGLQA*FQSYLE
Trigger: TTCTAAATAGCTCTGGAACCAGGCTTGTAATCCATA...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR GCA 90 bp AAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATTTGGTCATGCAGGGTCTCTTCAGTTGCCCATGTaGTGTGTGCAACTCTACTCA +
Preference number: 2 (lower is better)
Translates to: KCPSCHKQGQVKFGHAGSLQLPM*CVQLYS
Trigger: TGAGTAGAGTTGCACACAGCACATGGGCAACTGAAG...AGACCCTGCATGACCAAATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR TCA 90 bp CCAGAAAATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTTTGGTGCCCTCCTCTTaGCTCCTTGAGCAAACCCAA +
Preference number: 2 (lower is better)
Translates to: PENVRFNSMRKKTQRPWSLVPSS*LLEQTQ
Trigger: TTGGGTTTGCTCAAGGAGTCAAGAGGAGGGCACCAA...AGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR GCA 90 bp CTGGAAATTGAAGAGAAAAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATTGGCATGGTCGAGCTTaGTGGAGCGAGAAGATTTCC +
Preference number: 2 (lower is better)
Translates to: LEIEEKNALLAINKGRSNWHGRA*WSEKIS
Trigger: GGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCA...ATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTCTCTTCAATTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CCA 90 bp CTGGAAATTGAAGAGAAAAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATCATGGTCGAGCTTGCTaGAGCGAGAAGATTTCCAGC +
Preference number: 2 (lower is better)
Translates to: LEIEEKNALLAINKGRSNHGRAC*SEKISS
Trigger: GCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATG...ATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTCTCTTCAATTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CCA 90 bp CTGGAAATTGAAGAGAAAAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATCTCACCCATGTCTGCTaGGGACTGAATGCCACTTCT +
Preference number: 2 (lower is better)
Translates to: LEIEEKNALLAINKGRSNLTHVC*GLNATS
Trigger: AGAAGTGGCATTCAGTCCCCAGCAGACATGGGTGAG...ATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTCTCTTCAATTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CAA 90 bp AGAAAATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTaGGTCTTCCTCCCTTACATGAGGAACTGGGTCCTAGGAAACCCT +
Preference number: 2 (lower is better)
Translates to: RKCQVQFHEEENTKT*VFLPYMRNWVLGNP
Trigger: AGGGTTTCCTAGGACCCAGTTCCTCATGTAAGGGAGGAAGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CCA 90 bp GAGTGGAAGACAAGCAAACTATTAAATGCTAAACACCCCTTCTTCCCTCTCAAGGAGTCGGTGATGCTATaGATTACAAGCCTGGTTCCA +
Preference number: 2 (lower is better)
Translates to: EWKTSKLLNAKHPFFPLKESVML*ITSLVP
Trigger: TGGAACCAGGCTTGTAATCCATAGCATCACCGACTC...CTTGAGAGGGAAGAAGGGGTGTTTAGCATTTAATAGTTTGCTTGTCTTCCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CCA 90 bp CCAGAAAATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTAGTATGTGTTTCCACTaGTGCCAGCCCTACCAAGGT +
Preference number: 2 (lower is better)
Translates to: PENVRFNSMRKKTQRPWSSMCFH*CQPYQG
Trigger: ACCTTGGTAGGGCTGGCACCAGTGGAAACACATACT...AGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CAA 90 bp ATGAACCAATTCTTGAAAAGTGTTCCAGGGCCACAGGTTCTTAGATaGGGAAGCAAGATGACAGTTCTGACTAGCTTAGTTTTCCAGACT +
Preference number: 2 (lower is better)
Translates to: MNQFLKSVPGPQVLR*GSKMTVLTSLVFQT
Trigger: AGTCTGGAAAACTAAGCTAGTCAGAACTGTCATCTTGCTTCCCAATCTAAGAACCTGTGGCCCTGGAACACTTTTCAAGAATTGGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR GCA 90 bp CCAGAAAATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTGAAAAATGCCCTTCTTaGCATAAACAAGGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: PENVRFNSMRKKTQRPWSEKCPS*HKQGQV
Trigger: GACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTC...AGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATTTTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR TCA 72 bp TCGAGCTTGCTGGAGCGAGAAGATTTCCAGCTGCCCTaGGTCGGAGCCCTCCACTCACCCCCATTCCCAGGC +
Preference number: 3 (lower is better)
Translates to: SSLLEREDFQLP*VGALHSPPFPG
Trigger: GCCTGGGAATGGGGGTGAGTGGAGGGCTCCGACTCAGGGCAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CAA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCGCTCGGCCCCCAGCCTaGGGGACTCGACACTTGTTA +
Preference number: 3 (lower is better)
Translates to: RPPALGTRHLLVAMRESVARPPA*GTRHLL
Trigger: TAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGC...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
3UTR GCA 72 bp CATGGTCGAGCTTGCTGGAGCGAGAAGATTTCCAGCTaGCCTGAGTCGGAGCCCTCCACTCACCCCCATTCC +
Preference number: 3 (lower is better)
Translates to: HGRACWSEKISS*PESEPSTHPHS
Trigger: GGAATGGGGGTGAGTGGAGGGCTCCGACTCAGGGCAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 72 bp TTGTCCCGGCCAGTCTCTTGGCATGGTCGAGCTTGCTaGAGCGAGAAGATTTCCAGCTGCCCTGAGTCGGAG +
Preference number: 3 (lower is better)
Translates to: LSRPVSWHGRAC*SEKISSCPESE
Trigger: CTCCGACTCAGGGCAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 72 bp TCAATCAAATTCAAGTCCAGGTCCCCAAAGTCCCGCTaGCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCC +
Preference number: 3 (lower is better)
Translates to: SIKFKSRSPKSR*HSVRLLSACRP
Trigger: GGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAATTTGATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR TCA 72 bp TTTCCTGCAGTCACCTTCCCAACAGCAGTGCTGGGGTaGGCTCACCCATGTCTGCTGGGGACTGAATGCCAC +
Preference number: 3 (lower is better)
Translates to: FPAVTFPTAVLG*AHPCLLGTECH
Trigger: GTGGCATTCAGTCCCCAGCAGACATGGGTGAGCTCACCCCAGCACTGCTGTTGGGAAGGTGACTGCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 72 bp ATCTTGTCCCGGCCAGTCTCTTGGCATGGTCGAGCTTaGTGGAGCGAGAAGATTTCCAGCTGCCCTGAGTCG +
Preference number: 3 (lower is better)
Translates to: ILSRPVSWHGRA*WSEKISSCPES
Trigger: CGACTCAGGGCAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CAA 90 bp TTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCTCAGTTGTCCCGGCCAGTCTCTaGGCATGGTCGAGCTTGCTG +
Preference number: 3 (lower is better)
Translates to: LVAMRESVCVAPGSSLSVVPASL*AWSSLL
Trigger: CAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGAC...AACTGAGAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR TCA 72 bp AGTGCTGGGGTGAGCTCACCCATGTCTGCTGGGGACTaGATGCCACTTCTGTTGCAGGTCTGCCTCAGTAGA +
Preference number: 3 (lower is better)
Translates to: SAGVSSPMSAGD*MPLLLQVCLSR
Trigger: TCTACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTGAGCTCACCCCAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 72 bp GCCCCTCAACCCTGCTTCAGTTGCCCATGTGCTGTGTaGAACTCTACTCAAGAGGGCAAAAGAGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: APQPCFSCPCAV*NSTQEGKRGRW
Trigger: CCACCTGCCTCTTTTGCCCTCTTGAGTAGAGTTGCACACAGCACATGGGCAACTGAAGCAGGGTTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 72 bp GGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTTaGCCATGTGCTGTGTGCAACTCTACTCAAGAGGGC +
Preference number: 3 (lower is better)
Translates to: GERERAPQPCFS*PCAVCNSTQEG
Trigger: GCCCTCTTGAGTAGAGTTGCACACAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 72 bp CCACCAGCTCCGTTTATCTTGTCCCGGCCAGTCTCTTaGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTCC +
Preference number: 3 (lower is better)
Translates to: PPAPFILSRPVS*HGRACWSEKIS
Trigger: GGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 72 bp GTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTaGCCACTTGGACCAGCTGTCCTGGCTCAAGTTGCG +
Preference number: 3 (lower is better)
Translates to: VPALPRYLNPSL*PLGPAVLAQVA
Trigger: CGCAACTTGAGCCAGGACAGCTGGTCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 72 bp AGCTCCGTTTATCTTGTCCCGGCCAGTCTCTTGGCATaGTCGAGCTTGCTGGAGCGAGAAGATTTCCAGCTG +
Preference number: 3 (lower is better)
Translates to: SSVYLVPASLLA*SSLLEREDFQL
Trigger: CAGCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAGATAAACGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 72 bp ATTGGTTTCCTGCAGTCACCTTCCCAACAGCAGTGCTaGGGTGAGCTCACCCATGTCTGCTGGGGACTGAAT +
Preference number: 3 (lower is better)
Translates to: IGFLQSPSQQQC*GELTHVCWGLN
Trigger: ATTCAGTCCCCAGCAGACATGGGTGAGCTCACCCCAGCACTGCTGTTGGGAAGGTGACTGCAGGAAACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CAA 90 bp CTCAAGCAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCAGCTCGGCCCCCAGCCTaGGGGACTCGACACTTGTTA +
Preference number: 3 (lower is better)
Translates to: LKQVKKAGPGSCKNWFPAARPPA*GTRHLL
Trigger: TAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGC...TGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTGCTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 72 bp AGAGAGAGCCCCTCAACCCTGCTTCAGTTGCCCATGTaGTGTGTGCAACTCTACTCAAGAGGGCAAAAGAGG +
Preference number: 3 (lower is better)
Translates to: RESPSTLLQLPM*CVQLYSRGQKR
Trigger: CCTCTTTTGCCCTCTTGAGTAGAGTTGCACACAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 72 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTaGAGGTCTGCCTCAGTAGATGCTGGGGACCAATAT +
Preference number: 3 (lower is better)
Translates to: HPCLLGTECHFC*RSASVDAGDQY
Trigger: ATATTGGTCCCCAGCATCTACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 72 bp GCCTACAGAAACTCACTGGCATTGCCAGTAACCTGTTaGAAGCTGGCACAGCCAATCTACAGCAGAGAGCCC +
Preference number: 3 (lower is better)
Translates to: AYRNSLALPVTC*KLAQPIYSREP
Trigger: GGGCTCTCTGCTGTAGATTGGCTGTGCCAGCTTCCAACAGGTTACTGGCAATGCCAGTGAGTTTCTGTAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CAA 90 bp CCTCAATCAAATTCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCCGCTTTGGGGACTCGACACTaGTTAGTAGCCATGAGAGAG +
Preference number: 3 (lower is better)
Translates to: PQSNSSPGPQSPAGTVSALGTRH*LVAMRE
Trigger: CTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAA...AGCGGACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAATTTGATTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR CCA 72 bp CAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTaGTTTCCTGCAGTCACCTTCCCAACAGCAGTGCTG +
Preference number: 3 (lower is better)
Translates to: QVKKAGPGSCKN*FPAVTFPTAVL
Trigger: CAGCACTGCTGTTGGGAAGGTGACTGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 72 bp AACCACAGCTGGATAAAACCTCACAAGCTATTGTGGTaGCAGCTTCAGTATGTGTTTCCACTGGTGCCAGCC +
Preference number: 3 (lower is better)
Translates to: NHSWIKPHKLLW*QLQYVFPLVPA
Trigger: GGCTGGCACCAGTGGAAACACATACTGAAGCTGCCACCACAATAGCTTGTGAGGTTTTATCCAGCTGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CAA 90 bp AAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATTTGGTCATGCAGGGTCTTTGGCATGGTCGAGCTaGCTGGAGCGAGAAGATTTC +
Preference number: 3 (lower is better)
Translates to: KCPSCHKQGQVKFGHAGSLAWSS*LEREDF
Trigger: GAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAA...AGACCCTGCATGACCAAATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CAA 90 bp CTGGAAATTGAAGAGAAAAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATCCAGCTCCGTTTATCTaGTCCCGGCCAGTCTCTTGG +
Preference number: 3 (lower is better)
Translates to: LEIEEKNALLAINKGRSNPAPFI*SRPVSW
Trigger: CCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGG...ATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTCTCTTCAATTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CAA 90 bp CCAGAAAATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTCTGCCCATTGCTCTCTaGGTGGCAGGGATACTCACA +
Preference number: 3 (lower is better)
Translates to: PENVRFNSMRKKTQRPWSLPIAL*VAGILT
Trigger: TGTGAGTATCCCTGCCACCAAGAGAGCAATGGGCAG...AGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATTTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR GCA 72 bp TGGGGGTATCATGATACTCTGCTGTTAAGGAGCAATTaGCTTCCTTCCCTAAGGCTACGCAAACACACCTTT +
Preference number: 3 (lower is better)
Translates to: WGYHDTLLLRSN*LPSLRLRKHTF
Trigger: AAAGGTGTGTTTGCGTAGCCTTAGGGAAGGAAGGCAATTGCTCCTTAACAGCAGAGTATCATGATACCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 72 bp TCTAACCACAGCTGGATAAAACCTCACAAGCTATTGTaGTGGCAGCTTCAGTATGTGTTTCCACTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: SNHSWIKPHKLL*WQLQYVFPLVP
Trigger: TGGCACCAGTGGAAACACATACTGAAGCTGCCACCACAATAGCTTGTGAGGTTTTATCCAGCTGTGGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CAA 90 bp CCAGAAAATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTTTGGGGACTCGACACTaGTTAGTAGCCATGAGAGAG +
Preference number: 3 (lower is better)
Translates to: PENVRFNSMRKKTQRPWSLGTRH*LVAMRE
Trigger: CTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAA...AGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR-3UTR CAA 90 bp AATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTTCCTCCTGCTTCTCACAGCCTTaGCTTTATACATCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: NVRFNSMRKKTQRPWSSSCFSQP*LYTSSA
Trigger: GGCTGAGGATGTATAAAGCAAAGGCTGTGAGAAGCA...GGAGGAAGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CCA 72 bp CCCAAAATGAAATCCTTTGCAGAGTCGGTGATGCTATaGATTACAAGCCTGGTTCCAGAGCTATTTAGAAAA +
Preference number: 3 (lower is better)
Translates to: PKMKSFAESVML*ITSLVPELFRK
Trigger: TTTTCTAAATAGCTCTGGAACCAGGCTTGTAATCCATAGCATCACCGACTCTGCAAAGGATTTCATTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CAA 72 bp TCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCCGCTaGCTCAGCGCCTGCCGACCCCACCGCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SRSPKSRWHSVR*LSACRPHRTAP
Trigger: GGGGGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGACCTGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR CCA 90 bp CACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCACAGCCCCCTCCTCCCGGGGGTCTTCCTCGTaGCGCCGCTTGACCCCAGTT +
Preference number: 4 (lower is better)
Translates to: HSVRLLSACRPHRTAPSSRGSSS*RRLTPV
Trigger: AACTGGGGTCAAGCGGCGCCACGAGGAAGACCCCCG...GGAGGAGGGGGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR GCA 90 bp CAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCAGGCACAGTGTCCGCTTaGTCAGCGCCTGCCGACCCC +
Preference number: 4 (lower is better)
Translates to: QSPAGTVSACSAPADPTAGTVSA*SAPADP
Trigger: GGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCC...TGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR CCA 90 bp CGCTGGCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCACAGCCCCCTCCCCAAAGTCCCGCTaGCACAGTGTCCGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RWHSVRLLSACRPHRTAPSPKSR*HSVRLL
Trigger: GAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGA...GGGGGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR CCA 90 bp CAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCATCGCCAGGGCAGCTCTaGGGAGGATGCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QSPAGTVSACSAPADPTASPGQL*GGCGRA
Trigger: AGCTCTCCCGCATCCTCCCCAGAGCTGCCCTGGCGA...TGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR GCA 90 bp CACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCACAGCCCCCTCCTCCTTCCCTCTCCAGTCATaGCTGCTGAGTCGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: HSVRLLSACRPHRTAPSSFPLQS*LLSRGS
Trigger: GGAACCGCGACTCAGCAGGCATGACTGGAGAGGGAA...GGAGGAGGGGGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR GCA 90 bp GCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCACAGCCCCCTCCTCGCCGTCTTCTGCCACTaGAGCACCATTCTAGCACCA +
Preference number: 4 (lower is better)
Translates to: AQCPLAQRLPTPPHSPLLAVFCH*STILAP
Trigger: TGGTGCTAGAATGGTGCTGCAGTGGCAGAAGACGGC...GAGGAGGGGGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR GCA 90 bp GGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCGGCCGCCACACCGGCTaGCAGCGAGACAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: GSAPSLGDSTLVSSHERVGRHTG*QRDRST
Trigger: CGTGGACCTGTCTCGCTGGCAGCCGGTGTGGCGGCC...GACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCCGCTTGCTCAGCGCCTaGCGACCCCACCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GSAPSLGDSTLVSSHERVRLLSA*RPHRTA
Trigger: GGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCG...GACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CCA 90 bp GGCTGTCCCTCCCGCCACCAGCTCCGTTTATCTTGTCCCGGCCAGTCTCTTGGCTCGCCAGGGCAGCTCTaGGGAGGATGCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GCPSRHQLRLSCPGQSLGSPGQL*GGCGRA
Trigger: AGCTCTCCCGCATCCTCCCCAGAGCTGCCCTGGCGA...GCCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGGTGGCGGGAGGGACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp TCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCACAGCCACAGGCCATGAACCATaGTGGAGAGATGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SRWHSVRLLSACRPHRTATGHEP*WRDAAA
Trigger: GGCAGCAGCATCTCTCCACCATGGTTCATGGCCTGT...GGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR TCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCCGGGCCCAGACTGGGTaGCAGGGAGAAGCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVRAQTG*QGEAAL
Trigger: CAGCGCCGCTTCTCCCTGTCACCCAGTCTGGGCCCG...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp TTCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCCCTCGTGGCGCCGCTTaGCCCCAGTTTTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: FKSRSPKSRWHSVRLLSAPRGAA*PQFCGH
Trigger: ATGCCCGCAAAACTGGGGTCAAGCGGCGCCACGAGG...GGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR CCA 90 bp CCATTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATTGGGAGTCCACAGCTTaGAGGGGGCGGGCCGCCACA +
Preference number: 4 (lower is better)
Translates to: PFPGSAPSLGDSTLVSSHWESTA*RGRAAT
Trigger: TGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCA...ATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp GGCTGTCCCTCCCGCCACCAGCTCCGTTTATCTTGTCCCGGCCAGTCTCTTGGCGAGCTTGGAGGAACCTaGGGCTGGAGACCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: GCPSRHQLRLSCPGQSLGELGGT*GWRPAL
Trigger: CAAAGCGGGTCTCCAGCCTCAGGTTCCTCCAAGCTC...GCCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGGTGGCGGGAGGGACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGGGCAGCAGGTGGGAGTaGAGGGCAGCTGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHEGSRWE*RAAELP
Trigger: TGGCAGCTCAGCTGCCCTTCACTCCCACCTGCTGCC...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CCATTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATAGGGAGAAGCGGCGCTaGGGTGGGCAAGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: PFPGSAPSLGDSTLVSSHREKRR*GGQGDK
Trigger: CTTGTCACCTTGCCCACCTCAGCGCCGCTTCTCCCT...ATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CTTCGCTTTCACTCAGCACCTGGGAGGAACCCCCAGTGGGGCTGCAGGAAGCAGGGGGGCTACAGGCCATaGACCATGGTGGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: LRFHSAPGRNPQWGCRKQGGYRP*TMVERC
Trigger: GCATCTCTCCACCATGGTTCATGGCCTGTAGCCCCC...CTGCTTCCTGCAGCCCCACTGGGGGTTCCTCCCAGGTGCTGAGTGAAAGCGAAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR GCA 90 bp CTTGTCCCGGCCAGTCTCTTGGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTCGGGCAAGAAGCGGCTTaGCTGCGGGCCCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: LVPASLLAWSSLLEREDFGQEAA*LRAQTG
Trigger: CCCAGTCTGGGCCCGCAGGCAAGCCGCTTCTTGCCC...GAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCCAGCTCTGGGGAGGATaGGGGAGAGCTCCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVQLWGG*GRAPGR
Trigger: TCTGCCCGGAGCTCTCCCGCATCCTCCCCAGAGCTG...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR GCA 90 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGCAGGTCTGCCTCAGTACGCTTGCTCAGCGCCTaGCGACCCCACCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: HPCLLGTECHFCCRSASVRLLSA*RPHRTA
Trigger: GGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCG...TACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCAGCGGCAGTGCCTCTTaGATGGAGGGGCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVSGSAS*MEGQGA
Trigger: TGCCCCCTGCCCCTCCATCCAAGAGGCACTGCCGCT...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCCGGGGGTCTTCCTCGTaGCGCCGCTTGACCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVRGSSS*RRLTPV
Trigger: AACTGGGGTCAAGCGGCGCCACGAGGAAGACCCCCG...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR TCA 90 bp TTCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTCCAGACCTCACTTGTaGGCCGTCTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FKSRSPKSRWHSVRLLSASRPHL*AVFCHC
Trigger: GCAGTGGCAGAAGACGGCTCACAAGTGAGGTCTGGA...GGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR TCA 90 bp GCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCTCCCAGGAGCCACTTTaGGGGGAGGCGGCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ALGTRHLLVAMRESVCVASQEPL*GEAAQG
Trigger: ACCCTGCGCCGCCTCCCCTCAAAGTGGCTCCTGGGA...GGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp GGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCGATTTCCAGCTGCCCTaGGTCGGAGCCCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: GSAPSLGDSTLVSSHERVDFQLP*VGALHS
Trigger: TGAGTGGAGGGCTCCGACTCAGGGCAGCTGGAAATC...GACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CCATTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATACCATGGTGGAGAGATaGTGCTGCCTTCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PFPGSAPSLGDSTLVSSHTMVER*CCLPGL
Trigger: CAGCCCGGGAAGGCAGCAGCATCTCTCCACCATGGT...ATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR GCA 90 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGCAGGTCTGCCTCAGTAGGCACAGTGTCCGCTTaGTCAGCGCCTGCCGACCCC +
Preference number: 4 (lower is better)
Translates to: HPCLLGTECHFCCRSASVGTVSA*SAPADP
Trigger: GGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCC...TACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp TCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTAAGAAGCGGCTTGCCTaGGGGCCCAGACAGACACAA +
Preference number: 4 (lower is better)
Translates to: SSPGPQSPAGTVSACSAPKKRLA*GPRQTQ
Trigger: TTGTGTCTGTCTGGGCCCGCAGGCAAGCCGCTTCTT...AGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR CCA 90 bp ATTCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTTTCACTCAGCACCTaGGAGGAACCCCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: IQVQVPKVPLAQCPLAQRLSLST*EEPPVG
Trigger: CCCCACTGGGGGTTCCTCCCAGGTGCTGAGTGAAAG...GCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513056.5
3UTR CAA 72 bp TCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTaGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SQARPPALGTRH*LVAMRESVCVA
Trigger: GGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR TCA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGCAGATCACAAGGCTGTaGGCGGCTTCGGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHEQITRL*AASGKV
Trigger: AACCTTCCCCGAAGCCGCTCACAGCCTTGTGATCTG...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR TCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGACCTCGTGGCGCCGCTTaGCCCCAGTTTTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGPRGAA*PQFCGH
Trigger: ATGCCCGCAAAACTGGGGTCAAGCGGCGCCACGAGG...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCACAGCCCCCTCCTCCGAGACAAAGACCTCCTaGGTATGGTTTCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: HSVRLLSACRPHRTAPSSETKTS*VWFLIH
Trigger: ATGAATCAGAAACCATACTCAGGAGGTCTTTGTCTC...GGAGGAGGGGGCTGTGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR TCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCCAGCCAATCCCTCAGTaGGCCCCAACCTCCCTATGG +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVQPIPQ*APTSLW
Trigger: CCATAGGGAGGTTGGGGCTCACTGAGGGATTGGCTG...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCAACAGTTGGAGATGTCTaGATGATCAGGCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: QSPAGTVSACSAPADPTATVGDV*MIRQRQ
Trigger: CTGCCTTTGCCTGATCATGCAGACATCTCCAACTGT...TGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR GCA 90 bp GCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTTGCCCATGTGCTGCCACCACTGCCCCGGTaGTTTATGGGAGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: AEEREREPLNPASVAHVLPPLPR*FMGVHS
Trigger: GCTGTGGACTCCCATAAAGCACCGGGGCAGTGGTGG...CAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGAGGCTTCGGGGAAGGTTaGGGAGACCTCGAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGGFGEG*GDLEVA
Trigger: GGCGACCTCGAGGTCTCCGCAACCTTCCCCGAAGCC...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GGCTGTCCCTCCCGCCACCAGCTCCGTTTATCTTGTCCCGGCCAGTCTCTTGGCCTGCTGGGGACTGAATaGCACTTCTGTTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GCPSRHQLRLSCPGQSLGLLGTE*HFCCRS
Trigger: AGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAG...GCCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGGTGGCGGGAGGGACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CCATTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATCCTTCCCAACAGCAGTaGTGGGGTGAGCTCACCCAT +
Preference number: 4 (lower is better)
Translates to: PFPGSAPSLGDSTLVSSHPSQQQ*WGELTH
Trigger: ATGGGTGAGCTCACCCCAGCACTGCTGTTGGGAAGG...ATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGCAGGTCTGCCTCAGTAGCTGGAGACCCGCTTTaGGGGGCTCTGGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: HPCLLGTECHFCCRSASVAGDPL*GALVRH
Trigger: GTGCCTCACCAGAGCCCCCCAAAGCGGGTCTCCAGC...TACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGCCTGCGGGCCCAGACTaGGTGACAGGGAGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: DSTLVSSHERVSLCGPRKPAGPD*VTGRSG
Trigger: GCCGCTTCTCCCTGTCACCCAGTCTGGGCCCGCAGG...CTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCAACACTTTGGAGCAAATaGTGGATGTCTTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: QSPAGTVSACSAPADPTATLWSK*WMSSLL
Trigger: CAACAGGGAAGACATCCATCATTTGCTCCAAAGTGT...TGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR TCA 90 bp ACATCCTCAGCCAATCCCTCAGTGAGCCCCAACCTCCCTATGGTCTCTCAGGCCCAGATCACAAGGCTGTaGGCGGCTTCGGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: TSSANPSVSPNLPMVSQAQITRL*AASGKV
Trigger: AACCTTCCCCGAAGCCGCTCACAGCCTTGTGATCTG...GGCCTGAGAGACCATAGGGAGGTTGGGGCTCACTGAGGGATTGGCTGAGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGGCCGTCTTCTGCCACTaGAGCACCATTCTAGCACCA +
Preference number: 4 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHEAVFCH*STILAP
Trigger: TGGTGCTAGAATGGTGCTGCAGTGGCAGAAGACGGC...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR GCA 90 bp GCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCACCCCCTCCACCACTaGCCCGGTGCTTTATGGGAG +
Preference number: 4 (lower is better)
Translates to: ALGTRHLLVAMRESVCVAHPLHH*PGALWE
Trigger: CTCCCATAAAGCACCGGGGCAGTGGTGGAGGGGGTG...GGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGAAAGAAGCGGCTTGCCTaGGGGCCCAGACTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGKKRLA*GPRLGD
Trigger: GTCACCCAGTCTGGGCCCGCAGGCAAGCCGCTTCTT...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGGAGCTCACCCATGTCTaGTGGGGACTGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHEELTHV*WGLNAT
Trigger: AGTGGCATTCAGTCCCCAGCAGACATGGGTGAGCTC...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCGGGCAAGAAGCGGCTTaGCTGCGGGCCCAGACAGAC +
Preference number: 4 (lower is better)
Translates to: HLLVAMRESVCVAPGSSLGQEAA*LRAQTD
Trigger: GTCTGTCTGGGCCCGCAGGCAAGCCGCTTCTTGCCC...GAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR CCA 90 bp CCATTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATCACAGGAAGCTTCTCTaGATCTGGGGGCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PFPGSAPSLGDSTLVSSHHRKLL*IWGLRS
Trigger: AGACCTGAGCCCCCAGATCCAGAGAAGCTTCCTGTG...ATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGCCCCGGTGCTTTATaGGAGTCCACAGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVCPGAL*ESTAWR
Trigger: CCTCCAAGCTGTGGACTCCCATAAAGCACCGGGGCA...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGAGGGGGCTACAGGCCATaGACCATGGTGGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGGGYRP*TMVERC
Trigger: GCATCTCTCCACCATGGTTCATGGCCTGTAGCCCCC...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp GGCTGTCCCTCCCGCCACCAGCTCCGTTTATCTTGTCCCGGCCAGTCTCTTGGCTGCTGTACCCCAAAATaGAATCCTTTGCAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: GCPSRHQLRLSCPGQSLGCCTPK*NPLQSR
Trigger: CCGACTCTGCAAAGGATTTCATTTTGGGGTACAGCA...GCCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGGTGGCGGGAGGGACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGGAGCCAGGGGAGGAATaGAACCATAGATGGGCAACT +
Preference number: 4 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHEEPGEE*NHRWAT
Trigger: AGTTGCCCATCTATGGTTTCATTCCTCCCCTGGCTC...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGTTCCCTCTCCAGTCATaGCTGCTGAGTCGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: GDSTLVSSHERVSLCGPRFPLQS*LLSRGS
Trigger: GGAACCGCGACTCAGCAGGCATGACTGGAGAGGGAA...CCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR GCA 90 bp GCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCACCATGGTGGAGAGATaGTGCTGCCTTCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALGTRHLLVAMRESVCVATMVER*CCLPGL
Trigger: CAGCCCGGGAAGGCAGCAGCATCTCTCCACCATGGT...GGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR GCA 90 bp CCATTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATTGCCCATGTGCTGTGTaGAACTCTACTCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PFPGSAPSLGDSTLVSSHCPCAV*NSTQEG
Trigger: GCCCTCTTGAGTAGAGTTGCACACAGCACATGGGCA...ATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp ACATCCTCAGCCAATCCCTCAGTGAGCCCCAACCTCCCTATGGTCTCTCAGGCCAGAGCCCCTCAACCCTaGTTCAGTTGCCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: TSSANPSVSPNLPMVSQARAPQP*FSCPCA
Trigger: AGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCT...GGCCTGAGAGACCATAGGGAGGTTGGGGCTCACTGAGGGATTGGCTGAGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp ACATCCTCAGCCAATCCCTCAGTGAGCCCCAACCTCCCTATGGTCTCTCAGGCCACAGGCCATGAACCATaGTGGAGAGATGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TSSANPSVSPNLPMVSQATGHEP*WRDAAA
Trigger: GGCAGCAGCATCTCTCCACCATGGTTCATGGCCTGT...GGCCTGAGAGACCATAGGGAGGTTGGGGCTCACTGAGGGATTGGCTGAGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGGCCAGTCTCTTGGCATaGTCGAGCTTGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: GDSTLVSSHERVSLCGPRASLLA*SSLLER
Trigger: TCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGC...CCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCTGCCCATTGCTCTCTTaGTGGCAGGGATACTCACAC +
Preference number: 4 (lower is better)
Translates to: GSAPSLGDSTLVSSHERVCPLLS*WQGYSH
Trigger: GTGTGAGTATCCCTGCCACCAAGAGAGCAATGGGCA...GACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CTTGTCCCGGCCAGTCTCTTGGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTCTACAGCAGAGAGCCCTaGGATGAGGATGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVPASLLAWSSLLEREDFYSREP*DEDAPG
Trigger: TCCTGGGGCATCCTCATCCCAGGGCTCTCTGCTGTA...GAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp GGCTGTCCCTCCCGCCACCAGCTCCGTTTATCTTGTCCCGGCCAGTCTCTTGGCACACTTTGGAGCAAATaGTGGATGTCTTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GCPSRHQLRLSCPGQSLGTLWSK*WMSSLL
Trigger: CAACAGGGAAGACATCCATCATTTGCTCCAAAGTGT...GCCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGGTGGCGGGAGGGACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCACAGCAGTGCTGGGGTaGGCTCACCCATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HLLVAMRESVCVAPGSSLTAVLG*AHPCLL
Trigger: CAGCAGACATGGGTGAGCTCACCCCAGCACTGCTGT...GAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAAGCTCATCCAGAGTCTaGTTCTGTAGCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PGSAPSLGDSTLVSSHERSSSRV*FCSCSV
Trigger: CACTGAGCAGCTACAGAAGCAGACTCTGGATGAGCT...TCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR GCA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGCTCATCCAGAGTCTaGTTCTGTAGCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHESSSRV*FCSCSV
Trigger: CACTGAGCAGCTACAGAAGCAGACTCTGGATGAGCT...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR GCA 90 bp GCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCACTTGGGAGAAGGGCTaGTCCTTGGGGGAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ALGTRHLLVAMRESVCVATWEKG*SLGEFP
Trigger: GGGAAACTCCCCCAAGGAGCAGCCCTTCTCCCAAGT...GGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp TTTTCCTCAATCAAATTCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCGGCTTCGGGGAAGGTTaGGGAGACCTCGAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: FSSIKFKSRSPKSRWHSVGFGEG*GDLEVA
Trigger: GGCGACCTCGAGGTCTCCGCAACCTTCCCCGAAGCC...GACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAATTTGATTGAGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR GCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGAGAGAAGATTTCCAGCTaGCCTGAGTCGGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGEKISS*PESEPS
Trigger: GGAGGGCTCCGACTCAGGGCAGCTGGAAATCTTCTC...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GGGAAAAGGGTCCCATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTCAACCCTGCTTCAGTTaGCCATGTGCTGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: GKRVPSAEEREREPLNPAQPCFS*PCAVCN
Trigger: GTTGCACACAGCACATGGGCAACTGAAGCAGGGTTG...AGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATGGGACCCTTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGCCAGTGTCAGCCACATaGCCTGGAGGTGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: DSTLVSSHERVSLCGPRKPVSAT*PGGVLH
Trigger: GTGGAGCACACCTCCAGGGCATGTGGCTGACACTGG...CTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTCAGCACAGGAACAGTaGGGCAGGCCCCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DSTLVSSHERVSLCGPRKSAQEQ*GRPLQE
Trigger: TTCCTGGAGGGGCCTGCCCCACTGTTCCTGTGCTGA...CTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCCTTTCACTCAGCACCTaGGAGGAACCCCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: HLLVAMRESVCVAPGSSLLSLST*EEPPVG
Trigger: CCCCACTGGGGGTTCCTCCCAGGTGCTGAGTGAAAG...GAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CCA 90 bp GACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTCCCGGCCAGTCTCTTaGCATGGTCGAGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: DSTLVSSHERVSLCGPRKSRPVS*HGRACW
Trigger: CCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGA...CTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp ACATCCTCAGCCAATCCCTCAGTGAGCCCCAACCTCCCTATGGTCTCTCAGGCCCTCACCCATGTCTGCTaGGGACTGAATGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: TSSANPSVSPNLPMVSQALTHVC*GLNATS
Trigger: AGAAGTGGCATTCAGTCCCCAGCAGACATGGGTGAG...GGCCTGAGAGACCATAGGGAGGTTGGGGCTCACTGAGGGATTGGCTGAGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp ACATCCTCAGCCAATCCCTCAGTGAGCCCCAACCTCCCTATGGTCTCTCAGGCCTTGGGGAAACCAGGATaGAGGCAGAATCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: TSSANPSVSPNLPMVSQALGKPG*RQNHCL
Trigger: GAGGCAGTGATTCTGCCTCCATCCTGGTTTCCCCAA...GGCCTGAGAGACCATAGGGAGGTTGGGGCTCACTGAGGGATTGGCTGAGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CCATTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGGGATACTCACCTACTaGCCAACCACACTACACACA +
Preference number: 4 (lower is better)
Translates to: PFPGSAPSLGDSTLVSSHGILTY*PTTLHT
Trigger: TGTGTGTAGTGTGGTTGGCCAGTAGGTGAGTATCCC...ATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGACACCAGCCTGGGGAGTaGCTTCACTCACACACACAG +
Preference number: 4 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGHQPGE*LHSHTQ
Trigger: CTGTGTGTGTGAGTGAAGCCACTCCCCAGGCTGGTG...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGCAGGTCTGCCTCAGTAAGGAGAGCACCAGCCTaGGGAGTGGCTTCACTCACA +
Preference number: 4 (lower is better)
Translates to: HPCLLGTECHFCCRSASVRRAPA*GVASLT
Trigger: TGTGAGTGAAGCCACTCCCCAGGCTGGTGCTCTCCT...TACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CAA 72 bp GCCACCAGCTCCGTTTATCTTGTCCCGGCCAGTCTCTaGGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTC +
Preference number: 4 (lower is better)
Translates to: ATSSVYLVPASL*AWSSLLEREDF
Trigger: GAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGTGGCATGGTCGAGCTTaGTGGAGCGAGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: GDSTLVSSHERVSLCGPRWHGRA*WSEKIS
Trigger: GGAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCA...CCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGCAGGTCTGCCTCAGTATCCTTCCCTGCCCATTaGTCTCTTGGTGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: HPCLLGTECHFCCRSASVSFPAH*SLGGRD
Trigger: ATCCCTGCCACCAAGAGAGCAATGGGCAGGGAAGGA...TACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp TTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCTCAGTTGGTCGAGAGGAATCTTaGGCCAGGGCCAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LVAMRESVCVAPGSSLSVGREES*ARARLK
Trigger: CTTCAGCCTGGCCCTGGCCCAAGATTCCTCTCGACC...AACTGAGAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGGAGTCGGTGATGCTATaGATTACAAGCCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHEESVML*ITSLVP
Trigger: TGGAACCAGGCTTGTAATCCATAGCATCACCGACTC...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGAATCACTGTGGCCACTTaGACCAGCTGTCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGITVAT*TSCPGS
Trigger: TGAGCCAGGACAGCTGGTCCAAGTGGCCACAGTGAT...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTTGCCCATGTGCTGAGTATGTGTTTCCACTaGTGCCAGCCCTACCAAGGT +
Preference number: 4 (lower is better)
Translates to: AEEREREPLNPASVAHVLSMCFH*CQPYQG
Trigger: ACCTTGGTAGGGCTGGCACCAGTGGAAACACATACT...CAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCATCCTGGGGGTATCATaGTACTCTGCTGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVILGVS*YSAVKE
Trigger: CTCCTTAACAGCAGAGTATCATGATACCCCCAGGAT...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp GCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTTGCCCATGTGCTGTTCCTACCTAGTCTATaGCTTAGAAGGGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: AEEREREPLNPASVAHVLFLPSL*LRRAEG
Trigger: ACCCTCTGCCCTTCTAAGTCATAGACTAGGTAGGAA...CAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp GCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCACAGATGCAGACATTaGCCCAGTGTCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: ALGTRHLLVAMRESVCVAHRCRH*PSVSHM
Trigger: CATGTGGCTGACACTGGGTCAATGTCTGCATCTGTG...GGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp AGATCCTGGGGGTATCATGATACTCTGCTGTTAAGGAGCAATTGCCTTCCTTCCCTGGGTGGTCTGAGGTaGAGGCTCAGGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RSWGYHDTLLLRSNCLPSLGGLR*RLRPEG
Trigger: TCCCTCAGGCCTGAGCCTGCACCTCAGACCACCCAG...GGAAGGAAGGCAATTGCTCCTTAACAGCAGAGTATCATGATACCCCCAGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAAAAGGAAAACTTGGTaGCCTCCTCTTGACTCCTTG +
Preference number: 4 (lower is better)
Translates to: GSAPSLGDSTLVSSHERVKRKTW*PPLDSL
Trigger: CAAGGAGTCAAGAGGAGGGCACCAAGTTTTCCTTTT...GACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GGGAAAAGGGTCCCATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTCTTCAGTTGCCCATGTaGTGTGTGCAACTCTACTCA +
Preference number: 4 (lower is better)
Translates to: GKRVPSAEEREREPLNPALQLPM*CVQLYS
Trigger: TGAGTAGAGTTGCACACAGCACATGGGCAACTGAAG...AGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATGGGACCCTTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGACTGATGCTCCTGACATaGAGGAGATCCAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: PGSAPSLGDSTLVSSHERLMLLT*RRSRKC
Trigger: ACATTTTCTGGATCTCCTGCATGTCAGGAGCATCAG...TCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGATCCCGGGCTGTTTCTTaGAGACAAAGACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGSRAVS*RQRPPE
Trigger: CTCAGGAGGTCTTTGTCTCCAAGAAACAGCCCGGGA...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCTCCCGGGCTGTTTCTTaGAGACAAAGACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ALGTRHLLVAMRESVCVASRAVS*RQRPPE
Trigger: CTCAGGAGGTCTTTGTCTCCAAGAAACAGCCCGGGA...GGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CCA 90 bp AGTTTTCCTCAATCAAATTCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGGGAAGCAGAGAGGGGTaGGGGGCTACAGGCCATGAA +
Preference number: 4 (lower is better)
Translates to: SFPQSNSSPGPQSPAGTVGSREG*GATGHE
Trigger: TTCATGGCCTGTAGCCCCCCACCCCTCTCTGCTTCC...CACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAATTTGATTGAGGAAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR CCA 90 bp CTTGTCCCGGCCAGTCTCTTGGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTCCCATTGCTCTCTTGGTaGCAGGGATACTCACACTCA +
Preference number: 4 (lower is better)
Translates to: LVPASLLAWSSLLEREDFPLLSW*QGYSHS
Trigger: TGAGTGTGAGTATCCCTGCCACCAAGAGAGCAATGG...GAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CAA 72 bp GGCCTACAGAAACTCACTGGCATTGCCAGTAACCTGTaGGAAGCTGGCACAGCCAATCTACAGCAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLQKLTGIASNL*EAGTANLQQRA
Trigger: GGCTCTCTGCTGTAGATTGGCTGTGCCAGCTTCCAACAGGTTACTGGCAATGCCAGTGAGTTTCTGTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGAGACACAAGTGCCCTTTaGAGCAAAGGGGCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGDTSAL*SKGASE
Trigger: TTCACTAGCCCCTTTGCTTCAAAGGGCACTTGTGTC...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CTCAAGCAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCACAGAGAGCCCTGGGATaGGGATGCCCCAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LKQVKKAGPGSCKNWFPAQRALG*GCPRRK
Trigger: TTTCCTCCTGGGGCATCCTCATCCCAGGGCTCTCTG...TGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTGCTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCATTCTAAGACACAAGTaGCCTTTGAAGCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVILRHK*PLKQRG
Trigger: GCCCCTTTGCTTCAAAGGGCACTTGTGTCTTAGAAT...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTTGCCCATGTGCTGGCTTCTCACAGCCTTTaGTTTATACATCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: AEEREREPLNPASVAHVLASHSL*FIHPQP
Trigger: TGGCTGAGGATGTATAAAGCAAAGGCTGTGAGAAGC...CAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCATGTGTTTCCACTGGTaGCAGCCCTACCAAGGTACT +
Preference number: 4 (lower is better)
Translates to: ALGTRHLLVAMRESVCVAMCFHW*QPYQGT
Trigger: AGTACCTTGGTAGGGCTGGCACCAGTGGAAACACAT...GGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCAAGAGTTCCCACAGTTaGAGATGTCTGCATGATCAG +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVKSSHS*RCLHDQ
Trigger: CTGATCATGCAGACATCTCCAACTGTGGGAACTCTT...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CCA 90 bp CACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCTCAGGTCTTAGGACTTaGGAGAAGGGCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HLLVAMRESVCVAPGSSLSGLRT*EKGCSL
Trigger: CAAGGAGCAGCCCTTCTCCCAAGTCCTAAGACCTGA...GAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp AGATCCTGGGGGTATCATGATACTCTGCTGTTAAGGAGCAATTGCCTTCCTTCCGGAAGCAGAGAGGGGTaGGGGGCTACAGGCCATGAA +
Preference number: 4 (lower is better)
Translates to: RSWGYHDTLLLRSNCLPSGSREG*GATGHE
Trigger: TTCATGGCCTGTAGCCCCCCACCCCTCTCTGCTTCC...GGAAGGAAGGCAATTGCTCCTTAACAGCAGAGTATCATGATACCCCCAGGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CTCAAGCAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCATCCCCAAAGTCCCGCTaGCACAGTGTCCGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LKQVKKAGPGSCKNWFPASPKSR*HSVRLL
Trigger: GAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGA...TGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTGCTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCACTTCCTGGCAGGAGTaGAAGACAAGCAAACTATTA +
Preference number: 4 (lower is better)
Translates to: GSAPSLGDSTLVSSHERVTSWQE*KTSKLL
Trigger: TAATAGTTTGCTTGTCTTCCACTCCTGCCAGGAAGT...GACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCGGGTCTAACCACAGCTaGATAAAACCTCACAAGCTA +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVGSNHS*IKPHKL
Trigger: TAGCTTGTGAGGTTTTATCCAGCTGTGGTTAGACCC...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCTTGCCAGTAACCTGTTaGAAGCTGGCACAGCCAATC +
Preference number: 4 (lower is better)
Translates to: ALGTRHLLVAMRESVCVALPVTC*KLAQPI
Trigger: GATTGGCTGTGCCAGCTTCCAACAGGTTACTGGCAA...GGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CTCAAGCAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCATCCAGACCTCACTTGTaGGCCGTCTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LKQVKKAGPGSCKNWFPASRPHL*AVFCHC
Trigger: GCAGTGGCAGAAGACGGCTCACAAGTGAGGTCTGGA...TGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTGCTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp GGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCGTAAATTCAATCCAATaGCAACCAAACTCCCAACTG +
Preference number: 4 (lower is better)
Translates to: GSAPSLGDSTLVSSHERVVNSIQ*QPNSQL
Trigger: CAGTTGGGAGTTTGGTTGTCATTGGATTGAATTTAC...GACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGTCAGGTTCAATTCCATaGGGAAGAAAACACAAAGAC +
Preference number: 4 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHESGSIP*GRKHKD
Trigger: GTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGA...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGAGTCTGCTTCTGTAGCTaGTCAGTGATCAGGGTTATC +
Preference number: 4 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGVCFCS*SVIRVI
Trigger: GATAACCCTGATCACTGAGCAGCTACAGAAGCAGAC...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGCAGGTCTGCCTCAGTAACAGTTGGAGATGTCTaGATGATCAGGCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HPCLLGTECHFCCRSASVTVGDV*MIRQRQ
Trigger: CTGCCTTTGCCTGATCATGCAGACATCTCCAACTGT...TACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CTTGTCCCGGCCAGTCTCTTGGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTCGAAAAATGCCCTTCTTaGCATAAACAAGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LVPASLLAWSSLLEREDFEKCPS*HKQGQV
Trigger: GACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTC...GAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GGGAAAAGGGTCCCATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTGGATCTTGTAAGAATTaGTTTCCTGCAGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: GKRVPSAEEREREPLNPAGSCKN*FPAVTF
Trigger: GAAGGTGACTGCAGGAAACCAATTCTTACAAGATCC...AGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATGGGACCCTTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTCAAAACAGCTAAAGTaGAGGGAGGTTGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RPPALGTRHLLVAMRESVSKQLK*REVACF
Trigger: AAAGCAAGCAACCTCCCTCCACTTTAGCTGTTTTGA...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CTGGAAATTGAAGAGAAAAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATCAGCTCTGGGGAGGATaGGGGAGAGCTCCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LEIEEKNALLAINKGRSNQLWGG*GRAPGR
Trigger: TCTGCCCGGAGCTCTCCCGCATCCTCCCCAGAGCTG...ATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTCTCTTCAATTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CTCAAGCAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCAATGGTGGAGAGATGCTaGTGCCTTCCCGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LKQVKKAGPGSCKNWFPAMVERC*CLPGLF
Trigger: AAACAGCCCGGGAAGGCAGCAGCATCTCTCCACCAT...TGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTGCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GGGAAAAGGGTCCCATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTAAAGTGGAGGGAGGTTaGTTGCTTTACAAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GKRVPSAEEREREPLNPAKVEGG*LLYKKK
Trigger: CTTCTTTTTGTAAAGCAAGCAACCTCCCTCCACTTT...AGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATGGGACCCTTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GAGTGGAAGACAAGCAAACTATTAAATGCTAAACACCCCTTCTTCCCTCTCAAGGAAGGGCAGCTGAGCTaGCACTGGGCAGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: EWKTSKLLNAKHPFFPLKEGQLS*HWAVTG
Trigger: CCCAGTGACTGCCCAGTGGCAGCTCAGCTGCCCTTC...CTTGAGAGGGAAGAAGGGGTGTTTAGCATTTAATAGTTTGCTTGTCTTCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp TTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCTCAGTTAAGTTGAGGCTGTCCTaGAACTCAGCACAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LVAMRESVCVAPGSSLSVKLRLS*NSAQEQ
Trigger: CTGTTCCTGTGCTGAGTTCCAGGACAGCCTCAACTT...AACTGAGAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CTCAAGCAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCAGTAGGGTCTGTGAGCTaGGGCACATTGAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LKQVKKAGPGSCKNWFPAVGSVS*GTLRRG
Trigger: GCCTCTTCTCAATGTGCCCCAGCTCACAGACCCTAC...TGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTGCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GGGAAAAGGGTCCCATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTAAAAACTCAAGATCCTaGGGGTATCATGATACTCTG +
Preference number: 4 (lower is better)
Translates to: GKRVPSAEEREREPLNPAKNSRS*GYHDTL
Trigger: CAGAGTATCATGATACCCCCAGGATCTTGAGTTTTT...AGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATGGGACCCTTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGCAGGTCTGCCTCAGTACAAATAAACACTTCCTaGCAGGAGTGGAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: HPCLLGTECHFCCRSASVQINTS*QEWKTS
Trigger: GCTTGTCTTCCACTCCTGCCAGGAAGTGTTTATTTG...TACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CTCAAGCAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCATTGGACCAGCTGTCCTaGCTCAAGTTGCGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LKQVKKAGPGSCKNWFPALDQLS*LKLRVR
Trigger: TCTCACCCGCAACTTGAGCCAGGACAGCTGGTCCAA...TGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTGCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp TTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCTCAGTTCCTTACATGAGGAACTaGGTCCTAGGAAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: LVAMRESVCVAPGSSLSVPYMRN*VLGNPG
Trigger: TCCAGGGTTTCCTAGGACCCAGTTCCTCATGTAAGG...AACTGAGAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCAAGAGTTCCCACAGTTaGAGATGTCTGCATGATCAG +
Preference number: 4 (lower is better)
Translates to: HLLVAMRESVCVAPGSSLKSSHS*RCLHDQ
Trigger: CTGATCATGCAGACATCTCCAACTGTGGGAACTCTT...GAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CCA 90 bp GAGTGGAAGACAAGCAAACTATTAAATGCTAAACACCCCTTCTTCCCTCTCAAGGTTTCCCCGACTGGGTaGTCTGAGGTGCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: EWKTSKLLNAKHPFFPLKVSPTG*SEVQAQ
Trigger: CTGAGCCTGCACCTCAGACCACCCAGTCGGGGAAAC...CTTGAGAGGGAAGAAGGGGTGTTTAGCATTTAATAGTTTGCTTGTCTTCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GAGTGGAAGACAAGCAAACTATTAAATGCTAAACACCCCTTCTTCCCTCTCAAGAGAAGGGCTGCTCCTTaGGGGAGTTTCCCCGACTGG +
Preference number: 4 (lower is better)
Translates to: EWKTSKLLNAKHPFFPLKRRAAP*GSFPDW
Trigger: CCAGTCGGGGAAACTCCCCCAAGGAGCAGCCCTTCT...CTTGAGAGGGAAGAAGGGGTGTTTAGCATTTAATAGTTTGCTTGTCTTCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp AGATCCTGGGGGTATCATGATACTCTGCTGTTAAGGAGCAATTGCCTTCCTTCCCATGGTCGAGCTTGCTaGAGCGAGAAGATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSWGYHDTLLLRSNCLPSHGRAC*SEKISS
Trigger: GCTGGAAATCTTCTCGCTCCAGCAAGCTCGACCATG...GGAAGGAAGGCAATTGCTCCTTAACAGCAGAGTATCATGATACCCCCAGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GAGTGGAAGACAAGCAAACTATTAAATGCTAAACACCCCTTCTTCCCTCTCAAGGTCAGCCACATGCCCTaGAGGTGTGCTCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: EWKTSKLLNAKHPFFPLKVSHMP*RCAPLW
Trigger: CCAGAGTGGAGCACACCTCCAGGGCATGTGGCTGAC...CTTGAGAGGGAAGAAGGGGTGTTTAGCATTTAATAGTTTGCTTGTCTTCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp AATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTTCCTCCGTGCAGGCTCAGGCCTaGGGGATGGTAGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: NVRFNSMRKKTQRPWSSSVQAQA*GMVAEV
Trigger: AACTTCAGCTACCATCCCTCAGGCCTGAGCCTGCAC...GGAGGAAGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp AATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTTCCTCCTGGAGACGAGGAGGCTaGAGCCTCACTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: NVRFNSMRKKTQRPWSSSWRRGG*SLTDAP
Trigger: AGGAGCATCAGTGAGGCTTCAGCCTCCTCGTCTCCA...GGAGGAAGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp TTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCTCAGTTCTGTTAAGGAGCAATTaGCTTCCTTCCCTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: LVAMRESVCVAPGSSLSVLLRSN*LPSLRL
Trigger: TAGCCTTAGGGAAGGAAGGCAATTGCTCCTTAACAG...AACTGAGAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCAGTCACCGAATGCCACTTCTGTTaGAGGTCTGCCTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: QVKKAGPGSCKNWFPAVTECHFC*RSASVD
Trigger: ATCTACTGAGGCAGACCTGCAACAGAAGTGGCATTC...GGTGACTGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp TTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCTCAGTTAACCAAACTCCCAACTaGTTCTCACAGCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LVAMRESVCVAPGSSLSVNQTPN*FSQPLL
Trigger: AAGCAAAGGCTGTGAGAAGCAGTTGGGAGTTTGGTT...AACTGAGAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CTGGAAATTGAAGAGAAAAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATCATGCCCTGGAGGTGTaGTCCACTCTGGGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: LEIEEKNALLAINKGRSNHALEV*STLGKP
Trigger: GGGCTTACCCAGAGTGGAGCACACCTCCAGGGCATG...ATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTCTCTTCAATTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp AATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTTCCTCCTCCCAACAGCAGTGCTaGGGTGAGCTCACCCATGTC +
Preference number: 4 (lower is better)
Translates to: NVRFNSMRKKTQRPWSSSSQQQC*GELTHV
Trigger: GACATGGGTGAGCTCACCCCAGCACTGCTGTTGGGA...GGAGGAAGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp AGATCCTGGGGGTATCATGATACTCTGCTGTTAAGGAGCAATTGCCTTCCTTCCATTCTCCCCAGGATTTaGCTTGCACACTTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RSWGYHDTLLLRSNCLPSILPRI*LAHFGA
Trigger: TGCTCCAAAGTGTGCAAGTCAAATCCTGGGGAGAAT...GGAAGGAAGGCAATTGCTCCTTAACAGCAGAGTATCATGATACCCCCAGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp AAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATTTGGTCATGCAGGGTCTGCACCAGGGAAATTATaGCCTGAAGAGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KCPSCHKQGQVKFGHAGSAPGKL*PEEGEE
Trigger: CTCTTCTCCCTCTTCAGGCCATAATTTCCCTGGTGC...AGACCCTGCATGACCAAATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp GAGTGGAAGACAAGCAAACTATTAAATGCTAAACACCCCTTCTTCCCTCTCAAGATGTCTGCTGGGGACTaGATGCCACTTCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: EWKTSKLLNAKHPFFPLKMSAGD*MPLLLQ
Trigger: CTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACAT...CTTGAGAGGGAAGAAGGGGTGTTTAGCATTTAATAGTTTGCTTGTCTTCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp AAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATTTGGTCATGCAGGGTCTCCTCACAAGCTATTGTaGTGGCAGCTTCAGTATGTG +
Preference number: 4 (lower is better)
Translates to: KCPSCHKQGQVKFGHAGSPHKLL*WQLQYV
Trigger: CACATACTGAAGCTGCCACCACAATAGCTTGTGAGG...AGACCCTGCATGACCAAATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
3UTR CAA 72 bp AATGACAACCAAACTCCCAACTGCTTCTCACAGCCTTaGCTTTATACATCCTCAGCCAATCCCTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: NDNQTPNCFSQP*LYTSSANPSVS
Trigger: GCTCACTGAGGGATTGGCTGAGGATGTATAAAGCAAAGGCTGTGAGAAGCAGTTGGGAGTTTGGTTGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp GAGTGGAAGACAAGCAAACTATTAAATGCTAAACACCCCTTCTTCCCTCTCAAGTTAAACCCATCACTGTaGCCACTTGGACCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: EWKTSKLLNAKHPFFPLKLNPSL*PLGPAV
Trigger: GACAGCTGGTCCAAGTGGCCACAGTGATGGGTTTAA...CTTGAGAGGGAAGAAGGGGTGTTTAGCATTTAATAGTTTGCTTGTCTTCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CCAGAAAATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTCCTTTGCAGAGTCGGTaGTGCTATGGATTACAAGCC +
Preference number: 4 (lower is better)
Translates to: PENVRFNSMRKKTQRPWSPLQSR*CYGLQA
Trigger: GGCTTGTAATCCATAGCATCACCGACTCTGCAAAGG...AGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR TCA 90 bp CTGGAAATTGAAGAGAAAAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATGAGACAAAGACCTCCTaGGTATGGTTTCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: LEIEEKNALLAINKGRSNETKTS*VWFLIH
Trigger: ATGAATCAGAAACCATACTCAGGAGGTCTTTGTCTC...ATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTCTCTTCAATTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp GAGTGGAAGACAAGCAAACTATTAAATGCTAAACACCCCTTCTTCCCTCTCAAGTGGAGGGAGGTTGCTTaGTTTACAAAAAGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: EWKTSKLLNAKHPFFPLKWREVA*FTKRSN
Trigger: ATTGCTTCTTTTTGTAAAGCAAGCAACCTCCCTCCA...CTTGAGAGGGAAGAAGGGGTGTTTAGCATTTAATAGTTTGCTTGTCTTCCACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR GCA 90 bp CCAGAAAATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTCAAAATGAAATCCTTTaGAGAGTCGGTGATGCTATG +
Preference number: 4 (lower is better)
Translates to: PENVRFNSMRKKTQRPWSQNEIL*RVGDAM
Trigger: CATAGCATCACCGACTCTGCAAAGGATTTCATTTTG...AGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CCA 90 bp CTGGAAATTGAAGAGAAAAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATTATGGATTACAAGCCTaGTTCCAGAGCTATTTAGAA +
Preference number: 4 (lower is better)
Translates to: LEIEEKNALLAINKGRSNYGLQA*FQSYLE
Trigger: TTCTAAATAGCTCTGGAACCAGGCTTGTAATCCATA...ATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTCTCTTCAATTTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS TCA 90 bp AAGGCGCGGTTCCTCCAGCTCCCAGGGCCGCGGCCGGAGCAGCTCTaGGCGCTCGGTTCGCCCCACGGTGCCCTTAAAAGGCGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: KARFLQLPGPRPEQL*ALGSPHGALKRRWR
Trigger: GCGCCAGCGCCTTTTAAGGGCACCGTGGGGCGAACCGAGCGCTCAGAGCTGCTCCGGCCGCGGCCCTGGGAGCTGGAGGAACCGCGCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505768.1
CDS GCA 90 bp TTTATGGGAGTCCACAGCTTGGAGGGGGCGGGCCGCCACACCGGCTaGCAGCGAGACAGGTCCACGGGCACTGAGAGTGAGCGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: FMGVHSLEGAGRHTG*QRDRSTGTESERQC
Trigger: GCACTGCCGCTCACTCTCAGTGCCCGTGGACCTGTCTCGCTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000505136.1
ENST00000505768.1
ENST00000507506.5
ENST00000511276.1
CDS CCA 90 bp AGCTCCGGGCAGAGGGCAAGAAGCGGCTTGCCTGCGGGCCCAGACTaGGTGACAGGGAGAAGCGGCGCTGAGGTGGGCAAGGTGACAAGG +
Preference number: 5 (lower is better)
Translates to: SSGQRARSGLPAGPD*VTGRSGAEVGKVTR
Trigger: CCTTGTCACCTTGCCCACCTCAGCGCCGCTTCTCCCTGTCACCCAGTCTGGGCCCGCAGGCAAGCCGCTTCTTGCCCTCTGCCCGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000507506.5
CDS GCA 90 bp TGCGGGCATCCAGATCACAAGGCTGTGAGCGGCTTCGGGGAAGGTTaGGGAGACCTCGAGGTCGCCAGGGCAGCTCTGGGGAGGATGCGG +
Preference number: 5 (lower is better)
Translates to: CGHPDHKAVSGFGEG*GDLEVARAALGRMR
Trigger: CCGCATCCTCCCCAGAGCTGCCCTGGCGACCTCGAGGTCTCCGCAACCTTCCCCGAAGCCGCTCACAGCCTTGTGATCTGGATGCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000513056.5
CDS GCA 90 bp GAATCCCCCTTCCCCCAGCAAAGGACCCGTCCGCGGCGTGAAGGCTaGTGGGAAGTGTGGTCCAAGCGCGGATTAGGGCCTGCTCGGAGT +
Preference number: 5 (lower is better)
Translates to: ESPFPQQRTRPRREG*WEVWSKRGLGPARS
Trigger: ACTCCGAGCAGGCCCTAATCCGCGCTTGGACCACACTTCCCAGCAGCCTTCACGCCGCGGACGGGTCCTTTGCTGGGGGAAGGGGGATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434981.6
ENST00000507506.5
CDS-3UTR CAA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGCTCCCAGGAGCCACTTaGAGGGGAGGCGGCGCAGGG +
Preference number: 5 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHELPGAT*RGGGAG
Trigger: CCCTGCGCCGCCTCCCCTCAAAGTGGCTCCTGGGAG...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp CCTCTTCGCTTTCACTCAGCACCTGGGAGGAACCCCCAGTGGGGCTGCAGGAAGTGGCACAGTGTCCGCTaGCTCAGCGCCTGCCGACCC +
Preference number: 5 (lower is better)
Translates to: PLRFHSAPGRNPQWGCRKWHSVR*LSACRP
Trigger: GGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCA...CTTCCTGCAGCCCCACTGGGGGTTCCTCCCAGGTGCTGAGTGAAAGCGAAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS TCA 90 bp GGGCAAGGTGACAAGGACTCAGCATCACTCTCCCAGGAGCCACTTTaGGGGGAGGCGGCGCAGGGTCGAGAGGAATCTTGGGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GQGDKDSASLSQEPL*GEAAQGREESWARA
Trigger: GGCCCTGGCCCAAGATTCCTCTCGACCCTGCGCCGCCTCCCCTCAAAGTGGCTCCTGGGAGAGTGATGCTGAGTCCTTGTCACCTTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000507506.5
CDS-3UTR CAA 90 bp CCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAAGGGCAAGAAGCGGCTaGCCTGCGGGCCCAGACAGA +
Preference number: 5 (lower is better)
Translates to: PGSAPSLGDSTLVSSHERRARSG*PAGPDR
Trigger: TCTGTCTGGGCCCGCAGGCAAGCCGCTTCTTGCCCT...TCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR CAA 90 bp CAAAGTCCCGCTGGCACAGTGTCCGCTTGCTCAGCGCCTGCCGACCCCACCGCAACCATTCTAGCACCATaGGGACTTCCCTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: QSPAGTVSACSAPADPTATILAP*GLPSPV
Trigger: GACTGGAGAGGGAAGTCCCAATGGTGCTAGAATGGT...TGCGGTGGGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCAGCGGGACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS-3UTR CAA 90 bp CTTGTCCCGGCCAGTCTCTTGGCATGGTCGAGCTTGCTGGAGCGAGAAGATTTCAGGGCAAGAAGCGGCTaGCCTGCGGGCCCAGACTGG +
Preference number: 5 (lower is better)
Translates to: LVPASLLAWSSLLEREDFRARSG*PAGPDW
Trigger: CCAGTCTGGGCCCGCAGGCAAGCCGCTTCTTGCCCT...GAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp GGGAAAAGGGTCCCATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTGAGAAGGGCTGCTCCTaGGGGGAGTTTCCCCGACTG +
Preference number: 5 (lower is better)
Translates to: GKRVPSAEEREREPLNPAEKGCS*GEFPRL
Trigger: CAGTCGGGGAAACTCCCCCAAGGAGCAGCCCTTCTC...AGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATGGGACCCTTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp GCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCGGCTTCGGGGAAGGTaGCGGAGACCTCGAGGTCGC +
Preference number: 5 (lower is better)
Translates to: ALGTRHLLVAMRESVCVARLRGR*RRPRGR
Trigger: GCGACCTCGAGGTCTCCGCAACCTTCCCCGAAGCCG...GGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CAA 90 bp GGGAAAAGGGTCCCATCAGCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTGCTCGGCCCCCAGCCTaGGGGACTCGACACTTGTTA +
Preference number: 5 (lower is better)
Translates to: GKRVPSAEEREREPLNPAARPPA*GTRHLL
Trigger: TAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGC...AGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGCTGATGGGACCCTTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp GGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCCCAGCTCCGTTTATCTaGTCCCGGCCAGTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: GSAPSLGDSTLVSSHERVPAPFI*SRPVSW
Trigger: CCAAGAGACTGGCCGGGACAAGATAAACGGAGCTGG...GACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp CACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCTCCTCGTGGCGCCGCTaGACCCCAGTTTTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: HLLVAMRESVCVAPGSSLSSWRR*TPVLRA
Trigger: TGCCCGCAAAACTGGGGTCAAGCGGCGCCACGAGGA...GAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CAA 90 bp GACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTCCTCGTGGCGCCGCTaGACCCCAGTTTTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: DSTLVSSHERVSLCGPRKSSWRR*TPVLRA
Trigger: TGCCCGCAAAACTGGGGTCAAGCGGCGCCACGAGGA...CTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS CCA 90 bp GCTCCGTGTCGTGTCTCTCTCAAAGTGTCTCTCGGACAGCGCTGTTaGGAACGAGCCTGGCGCTTTGATTTAGGGATGGGGGTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: APCRVSLKVSLGQRC*ERAWRFDLGMGVVS
Trigger: GGAAACCACCCCCATCCCTAAATCAAAGCGCCAGGCTCGTTCCCAACAGCGCTGTCCGAGAGACACTTTGAGAGAGACACGACACGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505768.1
CDS-3UTR CAA 90 bp CCATTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATCCTCCTCTTGACTCCTaGAGCAAACCCAACATCCTG +
Preference number: 5 (lower is better)
Translates to: PFPGSAPSLGDSTLVSSHPPLDS*SKPNIL
Trigger: CAGGATGTTGGGTTTGCTCAAGGAGTCAAGAGGAGG...ATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGTCAACCCTGCTTCAGTaGCCCATGTGCTGTGTGCAA +
Preference number: 5 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHESTLLQ*PMCCVQ
Trigger: TTGCACACAGCACATGGGCAACTGAAGCAGGGTTGA...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp AAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATTTGGTCATGCAGGGTCTATGGGAGTCCACAGCTaGGAGGGGGCGGGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: KCPSCHKQGQVKFGHAGSMGVHS*EGAGRH
Trigger: GTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCAT...AGACCCTGCATGACCAAATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp TTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCTCAGTTGCTCGGCCCCCAGCCTaGGGGACTCGACACTTGTTA +
Preference number: 5 (lower is better)
Translates to: LVAMRESVCVAPGSSLSVARPPA*GTRHLL
Trigger: TAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGC...AACTGAGAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS CCA 90 bp TCCAGGAAGCACCTTCAGACACAAGCTGGAAAGAGTTCCCACAGTTaGAGATGTCTGCATGATCAGGCAAAGGCTGCTCTGCTGCCCCGC +
Preference number: 5 (lower is better)
Translates to: SRKHLQTQAGKSSHS*RCLHDQAKAALLPR
Trigger: GCGGGGCAGCAGAGCAGCCTTTGCCTGATCATGCAGACATCTCCAACTGTGGGAACTCTTTCCAGCTTGTGTCTGAAGGTGCTTCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507506.5
CDS-3UTR CAA 90 bp CCATTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATTGGATGTCTTCCCTGTaGTTCTTCCAGACCTCACTT +
Preference number: 5 (lower is better)
Translates to: PFPGSAPSLGDSTLVSSHWMSSL*FFQTSL
Trigger: AAGTGAGGTCTGGAAGAACAACAGGGAAGACATCCA...ATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CAA 90 bp CCTCAATCAAATTCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCCGCTCGCTTGACCCCAGTTTaGCGGGCATCCAGATCACAA +
Preference number: 5 (lower is better)
Translates to: PQSNSSPGPQSPAGTVSARLTPV*RASRSQ
Trigger: TTGTGATCTGGATGCCCGCAAAACTGGGGTCAAGCG...AGCGGACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAATTTGATTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS CCA 90 bp GCTCCAGGGCCTGGAGCCAGTCATCCAGGAGGTCATCCAAAGGAGTaGAATCCATTGGTTCTAAGACTCTTCATTCCCTGCTTGAGGACC +
Preference number: 5 (lower is better)
Translates to: APGPGASHPGGHPKE*NPLVLRLFIPCLRT
Trigger: GGTCCTCAAGCAGGGAATGAAGAGTCTTAGAACCAATGGATTCCACTCCTTTGGATGACCTCCTGGATGACTGGCTCCAGGCCCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506710.1
CDS CCA 90 bp GTCTCTCTCAAAGTGTCTCTCGGACAGCGCTGTTGGGAACGAGCCTaGCGCTTTGATTTAGGGATGGGGGTGGTTTCCTCACTAACGAGT +
Preference number: 5 (lower is better)
Translates to: VSLKVSLGQRCWERA*RFDLGMGVVSSLTS
Trigger: ACTCGTTAGTGAGGAAACCACCCCCATCCCTAAATCAAAGCGCCAGGCTCGTTCCCAACAGCGCTGTCCGAGAGACACTTTGAGAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505768.1
CDS CCA 90 bp TCCAGGAAGCACCTTCAGACACAAGCTGGAAAGAGTTCCCACAGTTaGAGATGTCTGCATGATCAGGCAAAGGCGCGGTTCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SRKHLQTQAGKSSHS*RCLHDQAKARFLQL
Trigger: GAGCTGGAGGAACCGCGCCTTTGCCTGATCATGCAGACATCTCCAACTGTGGGAACTCTTTCCAGCTTGTGTCTGAAGGTGCTTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505768.1
CDS CCA 90 bp GCTCCAGGGCCTGGAGCCAGTCATCCAGGAGGTCATCCAAAGGAGTaGAATCCATTGGTTCTAAGACTCTTCATTCCCTGCCTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: APGPGASHPGGHPKE*NPLVLRLFIPCLLF
Trigger: GAACAGGAGGCAGGGAATGAAGAGTCTTAGAACCAATGGATTCCACTCCTTTGGATGACCTCCTGGATGACTGGCTCCAGGCCCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512180.5
CDS-3UTR CAA 90 bp GGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGTTGGGGACTCGACACTaGTTAGTAGCCATGAGAGAG +
Preference number: 5 (lower is better)
Translates to: GDSTLVSSHERVSLCGPRLGTRH*LVAMRE
Trigger: CTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAA...CCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CAA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGATTGGCATGGTCGAGCTaGCTGGAGCGAGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGLAWSS*LEREDF
Trigger: GAAATCTTCTCGCTCCAGCAAGCTCGACCATGCCAA...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp GCAGAGGAGAGAGAGAGAGAGCCCCTCAACCCTGCTTCAGTTGCCCATGTGCTGTGCTTCTCACAGCCTTaGCTTTATACATCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: AEEREREPLNPASVAHVLCFSQP*LYTSSA
Trigger: GGCTGAGGATGTATAAAGCAAAGGCTGTGAGAAGCA...CAGCACATGGGCAACTGAAGCAGGGTTGAGGGGCTCTCTCTCTCTCTCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp GGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGATTGCCAGTAACCTGTaGGAAGCTGGCACAGCCAAT +
Preference number: 5 (lower is better)
Translates to: GDSTLVSSHERVSLCGPRIASNL*EAGTAN
Trigger: ATTGGCTGTGCCAGCTTCCAACAGGTTACTGGCAAT...CCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp CGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCAGAAACTCACTGGCATaGCCAGTAACCTGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: RPPALGTRHLLVAMRESVRNSLA*PVTCWK
Trigger: CTTCCAACAGGTTACTGGCAATGCCAGTGAGTTTCT...GACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp GGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCGTGGAGGGAGGTTGCTaGCTTTACAAAAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: GSAPSLGDSTLVSSHERVVEGGC*LYKKKQ
Trigger: TTGCTTCTTTTTGTAAAGCAAGCAACCTCCCTCCAC...GACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS CCA 90 bp GAGATGCAGAACTGTCTCCATCCATATTCTGAGGGCTCCAGGGCCTaGAGCCAGTCATCCAGGAGGTCATCCAAAGGAGTGGAATCCATT +
Preference number: 5 (lower is better)
Translates to: EMQNCLHPYSEGSRA*SQSSRRSSKGVESI
Trigger: AATGGATTCCACTCCTTTGGATGACCTCCTGGATGACTGGCTCCAGGCCCTGGAGCCCTCAGAATATGGATGGAGACAGTTCTGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512180.5
CDS-3UTR CAA 90 bp TTCCCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGTTTGACTTGCACACTTaGGAGCAAATGATGGATGTC +
Preference number: 5 (lower is better)
Translates to: FPGSAPSLGDSTLVSSHEFDLHT*EQMMDV
Trigger: GACATCCATCATTTGCTCCAAAGTGTGCAAGTCAAA...CTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CAA 90 bp GGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGTCCCCAGGATTTGACTaGCACACTTTGGAGCAAATG +
Preference number: 5 (lower is better)
Translates to: GDSTLVSSHERVSLCGPRSPGFD*HTLEQM
Trigger: CATTTGCTCCAAAGTGTGCAAGTCAAATCCTGGGGA...CCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CAA 90 bp TTAGTAGCCATGAGAGAGTCAGTCTGTGTGGCCCCAGGAAGTAGCCTCTCAGTTCGCTTGACCCCAGTTTaGCGGGCATCCAGATCACAA +
Preference number: 5 (lower is better)
Translates to: LVAMRESVCVAPGSSLSVRLTPV*RASRSQ
Trigger: TTGTGATCTGGATGCCCGCAAAACTGGGGTCAAGCG...AACTGAGAGGCTACTTCCTGGGGCCACACAGACTGACTCTCTCATGGCTACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239906.10
ENST00000513056.5
CDS-3UTR CAA 90 bp CCACTGGTGCCAGCCCTACCAAGGTACTTAAACCCATCACTGTGGCCACTTGGATTGGGGACTCGACACTaGTTAGTAGCCATGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PLVPALPRYLNPSLWPLGLGTRH*LVAMRE
Trigger: CTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAA...TCCAAGTGGCCACAGTGATGGGTTTAAGTACCTTGGTAGGGCTGGCACCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp CTCAAGCAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCACATCACTGTGGCCACTaGGACCAGCTGTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LKQVKKAGPGSCKNWFPAHHCGH*DQLSWL
Trigger: GAGCCAGGACAGCTGGTCCAAGTGGCCACAGTGATG...TGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTGCTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS CCA 90 bp ACTGCTTATTTCCCTCTCCATCCATATTCTGAGGGCTCCAGGGCCTaGAGCCAGTCATCCAGGAGGTCATCCAAAGGAGTGGAATCCATT +
Preference number: 5 (lower is better)
Translates to: TAYFPLHPYSEGSRA*SQSSRRSSKGVESI
Trigger: AATGGATTCCACTCCTTTGGATGACCTCCTGGATGACTGGCTCCAGGCCCTGGAGCCCTCAGAATATGGATGGAGAGGGAAATAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506710.1
CDS-3UTR CAA 90 bp CACCCATGTCTGCTGGGGACTGAATGCCACTTCTGTTGCAGGTCTGCCTCAGTATGGATGTCTTCCCTGTaGTTCTTCCAGACCTCACTT +
Preference number: 5 (lower is better)
Translates to: HPCLLGTECHFCCRSASVWMSSL*FFQTSL
Trigger: AAGTGAGGTCTGGAAGAACAACAGGGAAGACATCCA...TACTGAGGCAGACCTGCAACAGAAGTGGCATTCAGTCCCCAGCAGACATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp CTGGAAATTGAAGAGAAAAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATTGGCACAGTGTCCGCTaGCTCAGCGCCTGCCGACCC +
Preference number: 5 (lower is better)
Translates to: LEIEEKNALLAINKGRSNWHSVR*LSACRP
Trigger: GGGTCGGCAGGCGCTGAGCAAGCGGACACTGTGCCA...ATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTTTTCTCTTCAATTTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp CAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCAGTCACCCTGCCCATTGCTCTCTaGGTGGCAGGGATACTCACA +
Preference number: 5 (lower is better)
Translates to: QVKKAGPGSCKNWFPAVTLPIAL*VAGILT
Trigger: TGTGAGTATCCCTGCCACCAAGAGAGCAATGGGCAG...GGTGACTGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp GGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTCAAAATGAACCAATTCTaGAAAAGTGTTCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: GSAPSLGDSTLVSSHERVKMNQF*KSVPGP
Trigger: TGGCCCTGGAACACTTTTCAAGAATTGGTTCATTTT...GACTCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp CCAGGCTCGGCCCCCAGCCTTGGGGACTCGACACTTGTTAGTAGCCATGAGAGAGTTTACACAGAACTGTaGGAACAGATCTACTGTGTA +
Preference number: 5 (lower is better)
Translates to: PGSAPSLGDSTLVSSHERVYTEL*EQIYCV
Trigger: TACACAGTAGATCTGTTCCAACAGTTCTGTGTAAAC...TCTCTCATGGCTACTAACAAGTGTCGAGTCCCCAAGGCTGGGGGCCGAGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS TCA 90 bp AAGTCTACAAACTTGCACTGCTTATTTCCCTCTCCATCCATATTCTaGGGGCTCCAGGGCCTGGAGCCAGTCATCCAGGAGGTCATCCAA +
Preference number: 5 (lower is better)
Translates to: KSTNLHCLFPSPSIF*GLQGLEPVIQEVIQ
Trigger: TTGGATGACCTCCTGGATGACTGGCTCCAGGCCCTGGAGCCCTCAGAATATGGATGGAGAGGGAAATAAGCAGTGCAAGTTTGTAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506710.1
CDS GCA 90 bp GGCAGACTGATGCTGAAGCGTGTGCATTTCAGCTCATCCAGAGTCTaGTTCTGTAGCTGCTCAGTGATCAGGGTTATCATGATTCTCCCC +
Preference number: 5 (lower is better)
Translates to: GRLMLKRVHFSSSRV*FCSCSVIRVIMILP
Trigger: GGGGAGAATCATGATAACCCTGATCACTGAGCAGCTACAGAAGCAGACTCTGGATGAGCTGAAATGCACACGCTTCAGCATCAGTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000513056.5
CDS CCA 90 bp ACCAAGTCTACAAATCTCCATCCATATTCTGAGGGCTCCAGGGCCTaGAGCCAGTCATCCAGGAGGTCATCCAAAGGAGTGGAATCCATT +
Preference number: 5 (lower is better)
Translates to: TKSTNLHPYSEGSRA*SQSSRRSSKGVESI
Trigger: AATGGATTCCACTCCTTTGGATGACCTCCTGGATGACTGGCTCCAGGCCCTGGAGCCCTCAGAATATGGATGGAGATTTGTAGACTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511595.5
CDS-3UTR CAA 90 bp AATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTTCCTCCGTCCCGGCCAGTCTCTaGGCATGGTCGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: NVRFNSMRKKTQRPWSSSVPASL*AWSSLL
Trigger: CAGCAAGCTCGACCATGCCAAGAGACTGGCCGGGAC...GGAGGAAGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp AAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATTTGGTCATGCAGGGTCTTTCCTTCCCTGCCCATaGCTCTCTTGGTGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: KCPSCHKQGQVKFGHAGSFLPCP*LSWWQG
Trigger: TCCCTGCCACCAAGAGAGCAATGGGCAGGGAAGGAA...AGACCCTGCATGACCAAATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS GCA 90 bp ACCAGACTGATGCTGAAGCGTGTGCATTTCAGCTCATCCAGAGTCTaGTTCTGTAGCTGCTCAGTGATCAGGGTTATCATGATTCTCCCC +
Preference number: 5 (lower is better)
Translates to: TRLMLKRVHFSSSRV*FCSCSVIRVIMILP
Trigger: GGGGAGAATCATGATAACCCTGATCACTGAGCAGCTACAGAAGCAGACTCTGGATGAGCTGAAATGCACACGCTTCAGCATCAGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511024.5
CDS-3UTR CAA 90 bp AGATCCTGGGGGTATCATGATACTCTGCTGTTAAGGAGCAATTGCCTTCCTTCCATTAGCACAGGGACTTaGGCAGCAGGTGGGAGTGAA +
Preference number: 5 (lower is better)
Translates to: RSWGYHDTLLLRSNCLPSISTGT*AAGGSE
Trigger: TTCACTCCCACCTGCTGCCAAAGTCCCTGTGCTAAT...GGAAGGAAGGCAATTGCTCCTTAACAGCAGAGTATCATGATACCCCCAGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS GCA 90 bp TTCAGACTGATGCTGAAGCGTGTGCATTTCAGCTCATCCAGAGTCTaGTTCTGTAGCTGCTCAGTGATCAGGGTTATCATGATTCTCCCC +
Preference number: 5 (lower is better)
Translates to: FRLMLKRVHFSSSRV*FCSCSVIRVIMILP
Trigger: GGGGAGAATCATGATAACCCTGATCACTGAGCAGCTACAGAAGCAGACTCTGGATGAGCTGAAATGCACACGCTTCAGCATCAGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505136.1
CDS-3UTR CAA 90 bp TTTTCCTCAATCAAATTCAAGTCCAGGTCCCCAAAGTCCCGCTGGCACAGTGTCTCCCCAGGATTTGACTaGCACACTTTGGAGCAAATG +
Preference number: 5 (lower is better)
Translates to: FSSIKFKSRSPKSRWHSVSPGFD*HTLEQM
Trigger: CATTTGCTCCAAAGTGTGCAAGTCAAATCCTGGGGA...GACACTGTGCCAGCGGGACTTTGGGGACCTGGACTTGAATTTGATTGAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS CCA 90 bp CCCTGGTCACTGGAAACCAATGATAGAAATGTGTGGAGAGAGGAATaGGTACACACACGTACACAAACACACACGATGCCTTACCAGACA +
Preference number: 5 (lower is better)
Translates to: PWSLETNDRNVWREE*VHTRTQTHTMPYQT
Trigger: TGTCTGGTAAGGCATCGTGTGTGTTTGTGTACGTGTGTGTACCCATTCCTCTCTCCACACATTTCTATCATTGGTTTCCAGTGACCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511024.5
CDS-3UTR CAA 90 bp AAATGCCCTTCTTGCCATAAACAAGGGCAGGTCAAATTTGGTCATGCAGGGTCTGCTGTTAAGGAGCAATaGCCTTCCTTCCCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: KCPSCHKQGQVKFGHAGSAVKEQ*PSFPKA
Trigger: AGCCTTAGGGAAGGAAGGCAATTGCTCCTTAACAGC...AGACCCTGCATGACCAAATTTGACCTGCCCTTGTTTATGGCAAGAAGGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS-3UTR CAA 90 bp CAGGTCAAAAAGGCTGGGCCTGGATCTTGTAAGAATTGGTTTCCTGCAGTCACCAAACCTCACAAGCTATaGTGGTGGCAGCTTCAGTAT +
Preference number: 5 (lower is better)
Translates to: QVKKAGPGSCKNWFPAVTKPHKL*WWQLQY
Trigger: ATACTGAAGCTGCCACCACAATAGCTTGTGAGGTTT...GGTGACTGCAGGAAACCAATTCTTACAAGATCCAGGCCCAGCCTTTTTGACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS TCA 90 bp TATCATGATTCTCCCCAGGATTTGACTTGCACACTTTGGAGCAAATaGTGGATGTCTTCCCTGTTGTTCTTCCAGACCTCACTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: YHDSPQDLTCTLWSK*WMSSLLFFQTSLVS
Trigger: GCTCACAAGTGAGGTCTGGAAGAACAACAGGGAAGACATCCATCATTTGCTCCAAAGTGTGCAAGTCAAATCCTGGGGAGAATCATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000505136.1
ENST00000511024.5
ENST00000513056.5
CDS TCA 90 bp TGTAGCTGCTCAGTGATCAGGGTTATCATGATTCTCCCCAGGATTTaGCTTGCACACTTTGGAGCAAATGATGGATGTCTTCCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: CSCSVIRVIMILPRI*LAHFGANDGCLPCC
Trigger: ACAACAGGGAAGACATCCATCATTTGCTCCAAAGTGTGCAAGTCAAATCCTGGGGAGAATCATGATAACCCTGATCACTGAGCAGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000505136.1
ENST00000511024.5
ENST00000513056.5
CDS-3UTR CAA 90 bp CCAGAAAATGTCAGGTTCAATTCCATGAGGAAGAAAACACAAAGACCTTGGTCTACCATTCTAGCACCATaGGGACTTCCCTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: PENVRFNSMRKKTQRPWSTILAP*GLPSPV
Trigger: GACTGGAGAGGGAAGTCCCAATGGTGCTAGAATGGT...AGACCAAGGTCTTTGTGTTTTCTTCCTCATGGAATTGAACCTGACATTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239906.10
CDS GCA 72 bp GTCCACAGCTTGGAGGGGGCGGGCCGCCACACCGGCTaGCAGCGAGACAGGTCCACGGGCACTGAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: VHSLEGAGRHTG*QRDRSTGTESE
Trigger: CTCACTCTCAGTGCCCGTGGACCTGTCTCGCTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000505136.1
ENST00000505768.1
ENST00000507506.5
ENST00000511276.1
CDS CCA 72 bp CACCACTGCCCCGGTGCTTTATGGGAGTCCACAGCTTaGAGGGGGCGGGCCGCCACACCGGCTGCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: HHCPGALWESTA*RGRAATPAASE
Trigger: CTCGCTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATAAAGCACCGGGGCAGTGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000505136.1
ENST00000505768.1
ENST00000507506.5
ENST00000511276.1
CDS CAA 72 bp CCACCACTGCCCCGGTGCTTTATGGGAGTCCACAGCTaGGAGGGGGCGGGCCGCCACACCGGCTGCCAGCGA +
Preference number: 6 (lower is better)
Translates to: PPLPRCFMGVHS*EGAGRHTGCQR
Trigger: TCGCTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATAAAGCACCGGGGCAGTGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000505136.1
ENST00000505768.1
ENST00000507506.5
ENST00000511276.1
CDS GCA 72 bp TCTGGTGAGGCACCTGCGGCCCACCCCCTCCACCACTaGCCCGGTGCTTTATGGGAGTCCACAGCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: SGEAPAAHPLHH*PGALWESTAWR
Trigger: CCTCCAAGCTGTGGACTCCCATAAAGCACCGGGGCAGTGGTGGAGGGGGTGGGCCGCAGGTGCCTCACCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000505136.1
ENST00000505768.1
ENST00000507506.5
ENST00000511276.1
CDS CCA 72 bp CCCCAGCAAAGGACCCGTCCGCGGCGTGAAGGCTGCTaGGAAGTGTGGTCCAAGCGCGGATTAGGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: PQQRTRPRREGC*EVWSKRGLGPA
Trigger: AGCAGGCCCTAATCCGCGCTTGGACCACACTTCCCAGCAGCCTTCACGCCGCGGACGGGTCCTTTGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434981.6
ENST00000507506.5
CDS CAA 90 bp TTGCGGGCATCCAGATCACAAGGCTGTGAGCGGCTTCGGGGAAGGTaGCGGAGACCTCGAGGTCGCCAGGGCAGCTCTGGGGAGGATGCG +
Preference number: 6 (lower is better)
Translates to: LRASRSQGCERLRGR*RRPRGRQGSSGEDA
Trigger: CGCATCCTCCCCAGAGCTGCCCTGGCGACCTCGAGGTCTCCGCAACCTTCCCCGAAGCCGCTCACAGCCTTGTGATCTGGATGCCCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000513056.5
CDS GCA 72 bp TTCCCCCAGCAAAGGACCCGTCCGCGGCGTGAAGGCTaGTGGGAAGTGTGGTCCAAGCGCGGATTAGGGCCT +
Preference number: 6 (lower is better)
Translates to: FPQQRTRPRREG*WEVWSKRGLGP
Trigger: AGGCCCTAATCCGCGCTTGGACCACACTTCCCAGCAGCCTTCACGCCGCGGACGGGTCCTTTGCTGGGGGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434981.6
ENST00000507506.5
CDS GCA 72 bp TGCGGGAGAGCTCCGGGCAGAGGGCAAGAAGCGGCTTaGCTGCGGGCCCAGACAGACACAAGCTGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: CGRAPGRGQEAA*LRAQTDTSWKE
Trigger: CTCTTTCCAGCTTGTGTCTGTCTGGGCCCGCAGGCAAGCCGCTTCTTGCCCTCTGCCCGGAGCTCTCCCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513056.5
CDS CAA 72 bp TCCAGATCACAAGGCTGTGAGCGGCTTCGGGGAAGGTaGCGGAGACCTCGAGGTCGCCAGGGCAGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: SRSQGCERLRGR*RRPRGRQGSSG
Trigger: CCCAGAGCTGCCCTGGCGACCTCGAGGTCTCCGCAACCTTCCCCGAAGCCGCTCACAGCCTTGTGATCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000513056.5
CDS CAA 72 bp CGGGGGTCTTCCTCGTGGCGCCGCTTGACCCCAGTTTaGCGGGCATCCAGATCACAAGGCTGTGAGCGGCTT +
Preference number: 6 (lower is better)
Translates to: RGSSSWRRLTPV*RASRSQGCERL
Trigger: AAGCCGCTCACAGCCTTGTGATCTGGATGCCCGCAAAACTGGGGTCAAGCGGCGCCACGAGGAAGACCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000513056.5
CDS TCA 72 bp GACAAGGACTCAGCATCACTCTCCCAGGAGCCACTTTaGGGGGAGGCGGCGCAGGGTCGAGAGGAATCTTGG +
Preference number: 6 (lower is better)
Translates to: DKDSASLSQEPL*GEAAQGREESW
Trigger: CCAAGATTCCTCTCGACCCTGCGCCGCCTCCCCTCAAAGTGGCTCCTGGGAGAGTGATGCTGAGTCCTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000507506.5
CDS GCA 72 bp CACAAGCTGGAAAGAGTTCCCACAGTTGGAGATGTCTaGATGATCAGGCAAAGGCTGCTCTGCTGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: HKLERVPTVGDV*MIRQRLLCCPA
Trigger: GGCGGGGCAGCAGAGCAGCCTTTGCCTGATCATGCAGACATCTCCAACTGTGGGAACTCTTTCCAGCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507506.5
CDS CCA 72 bp TTCCCTCTCCATCCATATTCTGAGGGCTCCAGGGCCTaGAGCCAGTCATCCAGGAGGTCATCCAAAGGAGTG +
Preference number: 6 (lower is better)
Translates to: FPLHPYSEGSRA*SQSSRRSSKGV
Trigger: CACTCCTTTGGATGACCTCCTGGATGACTGGCTCCAGGCCCTGGAGCCCTCAGAATATGGATGGAGAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506710.1
CDS CCA 72 bp CGTGTCTCTCTCAAAGTGTCTCTCGGACAGCGCTGTTaGGAACGAGCCTGGCGCTTTGATTTAGGGATGGGG +
Preference number: 6 (lower is better)
Translates to: RVSLKVSLGQRC*ERAWRFDLGMG
Trigger: CCCCATCCCTAAATCAAAGCGCCAGGCTCGTTCCCAACAGCGCTGTCCGAGAGACACTTTGAGAGAGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505768.1
CDS GCA 72 bp CACAAGCTGGAAAGAGTTCCCACAGTTGGAGATGTCTaGATGATCAGGCAAAGGCGCGGTTCCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: HKLERVPTVGDV*MIRQRRGSSSS
Trigger: GGAGCTGGAGGAACCGCGCCTTTGCCTGATCATGCAGACATCTCCAACTGTGGGAACTCTTTCCAGCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505768.1
CDS CCA 72 bp AAAGTGTCTCTCGGACAGCGCTGTTGGGAACGAGCCTaGCGCTTTGATTTAGGGATGGGGGTGGTTTCCTCA +
Preference number: 6 (lower is better)
Translates to: KVSLGQRCWERA*RFDLGMGVVSS
Trigger: TGAGGAAACCACCCCCATCCCTAAATCAAAGCGCCAGGCTCGTTCCCAACAGCGCTGTCCGAGAGACACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505768.1
CDS CCA 72 bp AACTGTCTCCATCCATATTCTGAGGGCTCCAGGGCCTaGAGCCAGTCATCCAGGAGGTCATCCAAAGGAGTG +
Preference number: 6 (lower is better)
Translates to: NCLHPYSEGSRA*SQSSRRSSKGV
Trigger: CACTCCTTTGGATGACCTCCTGGATGACTGGCTCCAGGCCCTGGAGCCCTCAGAATATGGATGGAGACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512180.5
CDS CCA 72 bp ACAAATCTCCATCCATATTCTGAGGGCTCCAGGGCCTaGAGCCAGTCATCCAGGAGGTCATCCAAAGGAGTG +
Preference number: 6 (lower is better)
Translates to: TNLHPYSEGSRA*SQSSRRSSKGV
Trigger: CACTCCTTTGGATGACCTCCTGGATGACTGGCTCCAGGCCCTGGAGCCCTCAGAATATGGATGGAGATTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511595.5
CDS TCA 72 bp GGATGTCTTCCCTGTTGTTCTTCCAGACCTCACTTGTaGGCCGTCTTCTGCCACTGCAGCACCATTCTAGCA +
Preference number: 6 (lower is better)
Translates to: GCLPCCSSRPHL*AVFCHCSTILA
Trigger: TGCTAGAATGGTGCTGCAGTGGCAGAAGACGGCTCACAAGTGAGGTCTGGAAGAACAACAGGGAAGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000505136.1
ENST00000511024.5
ENST00000513056.5
CDS CCA 72 bp TCTAAGACTCTTCATTCCCTGCCTCCTGTTCTTGTTTaGTGTTTCAGGGTGAAGCCCGGGCTGTCACTGTGC +
Preference number: 6 (lower is better)
Translates to: SKTLHSLPPVLV*CFRVKPGLSLC
Trigger: GCACAGTGACAGCCCGGGCTTCACCCTGAAACACCAAACAAGAACAGGAGGCAGGGAATGAAGAGTCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512180.5
CDS CAA 90 bp CCTGGAGCCAGTCATCCAGGAGGTCATCCAAAGGAGTGGAATCCATaGGTTCTAAGACTCTTCATTCCCTGCTTGAGGACCTGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: PGASHPGGHPKEWNP*VLRLFIPCLRTWCR
Trigger: TCTGCACCAGGTCCTCAAGCAGGGAATGAAGAGTCTTAGAACCAATGGATTCCACTCCTTTGGATGACCTCCTGGATGACTGGCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506710.1
CDS GCA 72 bp CACAAGCTGGAAAGAGTTCCCACAGTTGGAGATGTCTaGATGATCAGGCAAAGGCAGACTGATGCTGAAGCG +
Preference number: 6 (lower is better)
Translates to: HKLERVPTVGDV*MIRQRQTDAEA
Trigger: CGCTTCAGCATCAGTCTGCCTTTGCCTGATCATGCAGACATCTCCAACTGTGGGAACTCTTTCCAGCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000513056.5
CDS GCA 72 bp CACAAGCTGGAAAGAGTTCCCACAGTTGGAGATGTCTaGATGATCAGGCAAAGGCTCACTTGTGAGCCGTCT +
Preference number: 6 (lower is better)
Translates to: HKLERVPTVGDV*MIRQRLTCEPS
Trigger: AGACGGCTCACAAGTGAGCCTTTGCCTGATCATGCAGACATCTCCAACTGTGGGAACTCTTTCCAGCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511276.1
CDS CAA 90 bp CCTGGAGCCAGTCATCCAGGAGGTCATCCAAAGGAGTGGAATCCATaGGTTCTAAGACTCTTCATTCCCTGCCTCCTGTTCTTGTTTGGT +
Preference number: 6 (lower is better)
Translates to: PGASHPGGHPKEWNP*VLRLFIPCLLFLFG
Trigger: ACCAAACAAGAACAGGAGGCAGGGAATGAAGAGTCTTAGAACCAATGGATTCCACTCCTTTGGATGACCTCCTGGATGACTGGCTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512180.5
CDS GCA 72 bp TCTTCCAACATCTCAAACCCTTCTCCACCCAAGTTTTaGTGTCCCTTCTCTATCGGTGGAAAAATCCCTGCC +
Preference number: 6 (lower is better)
Translates to: SSNISNPSPPKF*CPFSIGGKIPA
Trigger: GGCAGGGATTTTTCCACCGATAGAGAAGGGACAGCAAAACTTGGGTGGAGAAGGGTTTGAGATGTTGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511024.5
CDS GCA 72 bp AGGAATGGGTACACACACGTACACAAACACACACGATaGCTTACCAGACACAAGCTGGAAAGAGTTCCCACA +
Preference number: 6 (lower is better)
Translates to: RNGYTHVHKHTR*LTRHKLERVPT
Trigger: TGTGGGAACTCTTTCCAGCTTGTGTCTGGTAAGGCATCGTGTGTGTTTGTGTACGTGTGTGTACCCATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511024.5
CDS CCA 72 bp CCCAGGACTTATAATGGTTGCGGGGACGTTTCCACTTaGTTCTGTAATTTGCCCTCACCCAGAACACTTTGT +
Preference number: 6 (lower is better)
Translates to: PRTYNGCGDVST*FCNLPSPRTLC
Trigger: ACAAAGTGTTCTGGGTGAGGGCAAATTACAGAACCAAGTGGAAACGTCCCCGCAACCATTATAAGTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434981.6
ENST00000507506.5
CDS CCA 72 bp GAAGGTTCTAGAGGTAGGCTCGCTAGCCCTGGTCACTaGAAACCAATGATAGAAATGTGTGGAGAGAGGAAT +
Preference number: 6 (lower is better)
Translates to: EGSRGRLASPGH*KPMIEMCGERN
Trigger: ATTCCTCTCTCCACACATTTCTATCATTGGTTTCCAGTGACCAGGGCTAGCGAGCCTACCTCTAGAACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511024.5
CDS CAA 72 bp AGTCATCCAGGAGGTCATCCAAAGGAGTGGAATCCATaGGTTCTAAGACTCTTCATTCCCTGCTTGAGGACC +
Preference number: 6 (lower is better)
Translates to: SHPGGHPKEWNP*VLRLFIPCLRT
Trigger: GGTCCTCAAGCAGGGAATGAAGAGTCTTAGAACCAATGGATTCCACTCCTTTGGATGACCTCCTGGATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506710.1
CDS CAA 72 bp AGTCATCCAGGAGGTCATCCAAAGGAGTGGAATCCATaGGTTCTAAGACTCTTCATTCCCTGCCTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: SHPGGHPKEWNP*VLRLFIPCLLF
Trigger: GAACAGGAGGCAGGGAATGAAGAGTCTTAGAACCAATGGATTCCACTCCTTTGGATGACCTCCTGGATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512180.5
CDS TCA 72 bp GCCTTCCCGGGCTGTTTCTTGGAGACAAAGACCTCCTaGGTATGGTTTCTGATTCATCTTGTCAAAGTCCAA +
Preference number: 6 (lower is better)
Translates to: AFPGCFLETKTS*VWFLIHLVKVQ
Trigger: TTGGACTTTGACAAGATGAATCAGAAACCATACTCAGGAGGTCTTTGTCTCCAAGAAACAGCCCGGGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000513056.5
CDS TCA 72 bp TCTAGGAAGCCCTCTTCAGTTCTCCTCTGCGATTCATaGGCTACAGGGATGTTAGGGACATTAAGTGTTCTT +
Preference number: 6 (lower is better)
Translates to: SRKPSSVLLCDS*ATGMLGTLSVL
Trigger: AAGAACACTTAATGTCCCTAACATCCCTGTAGCTCATGAATCGCAGAGGAGAACTGAAGAGGGCTTCCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511024.5
CDS GCA 72 bp CACAAGCTGGAAAGAGTTCCCACAGTTGGAGATGTCTaGATGATCAGGCAAAGGCTAAGAAAGAGAGAATAT +
Preference number: 6 (lower is better)
Translates to: HKLERVPTVGDV*MIRQRLRKREY
Trigger: ATATTCTCTCTTTCTTAGCCTTTGCCTGATCATGCAGACATCTCCAACTGTGGGAACTCTTTCCAGCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511024.5
CDS TCA 72 bp TCAGTGATCAGGGTTATCATGATTCTCCCCAGGATTTaGCTTGCACACTTTGGAGCAAATGATGGATGTCTT +
Preference number: 6 (lower is better)
Translates to: SVIRVIMILPRI*LAHFGANDGCL
Trigger: AAGACATCCATCATTTGCTCCAAAGTGTGCAAGTCAAATCCTGGGGAGAATCATGATAACCCTGATCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000239906.10
ENST00000434981.6
ENST00000505136.1
ENST00000511024.5
ENST00000513056.5