RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM53B (Homo sapiens)

Ensembl gene IDs: ENSG00000189319

Ensembl transcript IDs: ENST00000280780.6, ENST00000337318.8, ENST00000392754.7

Found 701 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGCCCGCAGCAGGGGGCCCGGGGTTCCACAGCTAGGGAAGCTTaGTCAGACAGGCAGCACACCCAGGGCACGGCCACTCACGCCCCC +
Preference number: 1 (lower is better)
Translates to: QSPQQGARGSTAREA*SDRQHTQGTATHAP
Trigger: GGGGGCGTGAGTGGCCGTGCCCTGGGTGTGCTGCCTGTCTGAGCAAGCTTCCCTAGCTGTGGAACCCCGGGCCCCCTGCTGCGGGCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 90 bp CAGAGGGTGCCCGAGCCCCGGTGCGCGGCCAGCCTGCTGCATCCCTaGCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCC +
Preference number: 1 (lower is better)
Translates to: QRVPEPRCAASLLHP*RLTSGVTVIPVTTP
Trigger: GGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATGCAGCAGGCTGGCCGCGCACCGGGGCTCGGGCACCCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 90 bp GGACATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTaGCCGAGCCCCGGTGCGCGGCCAGCCTGCTGCATCCCTGCCGGC +
Preference number: 1 (lower is better)
Translates to: GHGKVWHHCQCGARG*PSPGARPACCIPAG
Trigger: GCCGGCAGGGATGCAGCAGGCTGGCCGCGCACCGGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR TCA 90 bp TCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTaGCACACCCGCTGTATGACGCGGCCAGGCCAGGCTCTCCCCCAG +
Preference number: 1 (lower is better)
Translates to: SVDLVAATLGEPVRG*HTRCMTRPGQALPQ
Trigger: CTGGGGGAGAGCCTGGCCTGGCCGCGTCATACAGCGGGTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp GCCCCGGTGCGCGGCCAGCCTGCTGCATCCCTGCCGGCTGACGTCTaGAGTGACCGTCATTCCAGTGACCACCCCCATAGCCACAGACGG +
Preference number: 1 (lower is better)
Translates to: APVRGQPAASLPADV*SDRHSSDHPHSHRR
Trigger: CCGTCTGTGGCTATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATGCAGCAGGCTGGCCGCGCACCGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CCA 90 bp CCGCTGTATGACGCGGCCAGGCCAGGCTCTCCCCCAGGCAGCAGGTaGGCTCCCTCTCTGGGACCCGACACCACTCAGGAAGCTTTCATC +
Preference number: 1 (lower is better)
Translates to: PLYDAARPGSPPGSR*APSLGPDTTQEAFI
Trigger: GATGAAAGCTTCCTGAGTGGTGTCGGGTCCCAGAGAGGGAGCCCACCTGCTGCCTGGGGGAGAGCCTGGCCTGGCCGCGTCATACAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp CCGGCAGGAGCTACAGCAACCAGAGGTGAGCTGGTTCCCCGGCTCTaGGACCTGCCCAGTGCCCGGCATACCCCATGTGTCAGCCACCTG +
Preference number: 1 (lower is better)
Translates to: PAGATATRGELVPRL*DLPSARHTPCVSHL
Trigger: CAGGTGGCTGACACATGGGGTATGCCGGGCACTGGGCAGGTCCCAGAGCCGGGGAACCAGCTCACCTCTGGTTGCTGTAGCTCCTGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR TCA 90 bp CAGACCCTGGGCCCCGGGTCTACGCTTTCTGGTCGCCACACTTCCTaGAGCACGGCAACACCCACAACATCCAGCTCAGGGAAGCCCCTG +
Preference number: 1 (lower is better)
Translates to: QTLGPGSTLSGRHTS*STATPTTSSSGKPL
Trigger: CAGGGGCTTCCCTGAGCTGGATGTTGTGGGTGTTGCCGTGCTTCAGGAAGTGTGGCGACCAGAAAGCGTAGACCCGGGGCCCAGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 90 bp CCACCTGCTCGCAGCTCCCGTCTCCCGAGGCCGTTTTCAAGAGGCTaGCCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATG +
Preference number: 1 (lower is better)
Translates to: PPARSSRLPRPFSRG*PGIVPSLHSPEPTM
Trigger: CATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGGGCAGCCTCTTGAAAACGGCCTCGGGAGACGGGAGCTGCGAGCAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp GAAGGGCTGCCATCTGCTAACCCTGCCCCAACGGTGGCAGAGCCATaGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTC +
Preference number: 1 (lower is better)
Translates to: EGLPSANPAPTVAEP*GQPLHAVGEASKSV
Trigger: GACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTCTGCCACCGTTGGGGCAGGGTTAGCAGATGGCAGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp TTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTaGGCTCCCCCTAAGCTGACAAGGGCGTGGGCTTGTCTTGAGGTG +
Preference number: 1 (lower is better)
Translates to: LCRWLGLQQRCSPQD*APPKLTRAWACLEV
Trigger: CACCTCAAGACAAGCCCACGCCCTTGTCAGCTTAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR TCA 90 bp GCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTAAGCTaGCAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGT +
Preference number: 1 (lower is better)
Translates to: AYNRDAALRTGLPLS*QGRGLVLRWVMCPG
Trigger: ACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTGTCAGCTTAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR GCA 90 bp GAAAATCTGTACGTCTGGTCAGAACAAGCTCCCCACGGGCCCAGGTaGACGTCTGCCCGTGCAAATCCGGCCTCCACCGCGAGTAAGGCA +
Preference number: 1 (lower is better)
Translates to: ENLYVWSEQAPHGPR*TSARANPASTASKA
Trigger: TGCCTTACTCGCGGTGGAGGCCGGATTTGCACGGGCAGACGTGCACCTGGGCCCGTGGGGAGCTTGTTCTGACCAGACGTACAGATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CCA 90 bp TACCCAACACGGGAGGCCCTAACAAGCACCCTCCAAATCGTTCCTTaGGCCCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTC +
Preference number: 1 (lower is better)
Translates to: YPTREALTSTLQIVP*ARDSGHGLPSGGPV
Trigger: GACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAGGGTGCTTGTTAGGGCCTCCCGTGTTGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp CCAAATCGTTCCTTGGGCCCGAGACTCCGGACATGGCTTACCCTCTaGAGGGCCAGTCCAGCACCCCAGGGATTCTGTCTCTCACATTGG +
Preference number: 1 (lower is better)
Translates to: PNRSLGPRLRTWLTL*RASPAPQGFCLSHW
Trigger: CCAATGTGAGAGACAGAATCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGGGCCCAAGGAACGATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp AGGGACAGGCCAAGATGTCTCTGTCTGCTCAGAGCCACCAGCTCTTaGGTTCGGCTGTCCGGGATCACAAGTAGACATGCCTCCGGCAGG +
Preference number: 1 (lower is better)
Translates to: RDRPRCLCLLRATSS*VRLSGITSRHASGR
Trigger: CCTGCCGGAGGCATGTCTACTTGTGATCCCGGACAGCCGAACCCAAGAGCTGGTGGCTCTGAGCAGACAGAGACATCTTGGCCTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 90 bp CAACCATGCTTATCACTCAGTGACCTGTCAGCCACAGAGAAGGGCTaGCATCTGCTAACCCTGCCCCAACGGTGGCAGAGCCATGGGGTC +
Preference number: 1 (lower is better)
Translates to: QPCLSLSDLSATEKG*HLLTLPQRWQSHGV
Trigger: GACCCCATGGCTCTGCCACCGTTGGGGCAGGGTTAGCAGATGGCAGCCCTTCTCTGTGGCTGACAGGTCACTGAGTGATAAGCATGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp TGCTCGCAGCTCCCGTCTCCCGAGGCCGTTTTCAAGAGGCTGCCCTaGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTAT +
Preference number: 1 (lower is better)
Translates to: CSQLPSPEAVFKRLP*YRAIPTLTGTNHAY
Trigger: ATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGGGCAGCCTCTTGAAAACGGCCTCGGGAGACGGGAGCTGCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp AAGCTGACAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTaGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGCCTGGA +
Preference number: 1 (lower is better)
Translates to: KLTRAWACLEVGDVP*LQPAVLKDKREVPG
Trigger: TCCAGGCACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTGTCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR TCA 90 bp GTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGTaGCCTGTCAGCCACAGAGAAGGGCTGCCATCTGCTAACCCTGCC +
Preference number: 1 (lower is better)
Translates to: VPSLHSPEPTMLITQ*PVSHREGLPSANPA
Trigger: GGCAGGGTTAGCAGATGGCAGCCCTTCTCTGTGGCTGACAGGTCACTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR GCA 90 bp GCTGCCCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATaGTTATCACTCAGTGACCTGTCAGCCACAGAGAAGGGCTGCCAT +
Preference number: 1 (lower is better)
Translates to: AALVSCHPYTHRNQP*LSLSDLSATEKGCH
Trigger: ATGGCAGCCCTTCTCTGTGGCTGACAGGTCACTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR GCA 90 bp CGGGGGCAAGACATGGCCATGTGCTCTCCACATTCACCCAACAACTaGCCTGGCCGCCTCCACATTTGCTCTAAGAAGACATGGTCTCCA +
Preference number: 1 (lower is better)
Translates to: RGQDMAMCSPHSPNN*PGRLHICSKKTWSP
Trigger: TGGAGACCATGTCTTCTTAGAGCAAATGTGGAGGCGGCCAGGGCAGTTGTTGGGTGAATGTGGAGAGCACATGGCCATGTCTTGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 90 bp GCTAAAAGCCAGATTCCCATAGAGCAGAGCCCATGTGGTGGTGTCTaGAAGGCAGCCGGAGAGGAGCTACAAACCTTGAGAGGAGAGCAA +
Preference number: 1 (lower is better)
Translates to: AKSQIPIEQSPCGGV*KAAGEELQTLRGEQ
Trigger: TTGCTCTCCTCTCAAGGTTTGTAGCTCCTCTCCGGCTGCCTTGCAGACACCACCACATGGGCTCTGCTCTATGGGAATCTGGCTTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp CAGGAACAGGCTGCTCCGGGCAGTGTGGCAGCTTGGATGATGGGGTaGCACCTTATAGATAGGGTCTACTCCCTCCAGTCAAAACACAAA +
Preference number: 1 (lower is better)
Translates to: QEQAAPGSVAAWMMG*HLIDRVYSLQSKHK
Trigger: TTTGTGTTTTGACTGGAGGGAGTAGACCCTATCTATAAGGTGCCACCCCATCATCCAAGCTGCCACACTGCCCGGAGCAGCCTGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR TCA 90 bp GTTCTGGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTaGAGCAGGGAGACCTGGGAGAGAAGGCACGGAGTAAAACTGAGT +
Preference number: 1 (lower is better)
Translates to: VLVLQKEASPEPSQA*SRETWERRHGVKLS
Trigger: ACTCAGTTTTACTCCGTGCCTTCTCTCCCAGGTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp CAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATaGTTCTGGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAG +
Preference number: 1 (lower is better)
Translates to: QHPRDSVSHIGIKAK*FWCYRRKHLPNLPK
Trigger: CTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACCAGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp CCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTaGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAA +
Preference number: 1 (lower is better)
Translates to: PRDSVSHIGIKAKWF*CYRRKHLPNLPKPE
Trigger: TTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACCAGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp CGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATaGGAAAATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTG +
Preference number: 1 (lower is better)
Translates to: RVSQHKGAHQLFLAL*ENEPLAPKPAQLLL
Trigger: CAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCATTTTCCCATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 90 bp TCCCAAAAAGCATCTTTCTTGAGGAGAAAGAAGGTGAGAAGCATCTaGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGAC +
Preference number: 1 (lower is better)
Translates to: SQKASFLRRKKVRSI*TQPAEARRSLVHED
Trigger: GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCACCTTCTTTCTCCTCAAGAAAGATGCTTTTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR TCA 90 bp AATCTTTCTCTTCTTTTCTCTTTAAAGAGGCATGACAGAGGGGTTTaGCCAACAGCGTGGACATGGCAAGGTGTGGCATCATTGCCAGTG +
Preference number: 1 (lower is better)
Translates to: NLSLLFSLKRHDRGV*PTAWTWQGVASLPV
Trigger: CACTGGCAATGATGCCACACCTTGCCATGTCCACGCTGTTGGTCAAACCCCTCTGTCATGCCTCTTTAAAGAGAAAAGAAGAGAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CCA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTaGACTGCTTCCTCTAAGACTCAGCCACCGCCTGTAAAATGGATA +
Preference number: 1 (lower is better)
Translates to: TRNFKLYMWLEFWFH*TASSKTQPPPVKWI
Trigger: TATCCATTTTACAGGCGGTGGCTGAGTCTTAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
3UTR-3UTR CCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACGGTGGGCTCCCTCTCTaGGACCCGACACCACTCAGG +
Preference number: 2 (lower is better)
Translates to: FCGPGGCHARGAGERLTHGGLPL*DPTPLR
Trigger: CCTGAGTGGTGTCGGGTCCCAGAGAGGGAGCCCACC...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTAGAGCCGGTGAGAGGCTaGCACACCCGCTGTATGACG +
Preference number: 2 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLEPVRG*HTRCMT
Trigger: CGTCATACAGCGGGTGTGTCAGCCTCTCACCGGCTC...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTAAGCGGTGCCCAGCTCTaGCGGGGACAACAGAGACTG +
Preference number: 2 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLSGAQL*RGQQRL
Trigger: CAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCT...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGAGTAGTTCTGTGGACCTaGTGGCTGCCACGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGVVLWT*WLPRSG
Trigger: CCCCGAGCGTGGCAGCCACCAGGTCCACAGAACTAC...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGGACACACCCGCTGTATaGCGCGGCCAGGCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQDTPAV*RGQARL
Trigger: GAGCCTGGCCTGGCCGCGTCATACAGCGGGTGTGTC...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GACATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCAGCGGTGCCCAGCTCTaGCGGGGACAACAGAGACTG +
Preference number: 2 (lower is better)
Translates to: DMARCGIIASVGPEGARASGAQL*RGQQRL
Trigger: CAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCT...GGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp GGCCCAGGTGCACGTCTGCCCGTGCAAATCCGGCCTCCACCGCGAGTAAGGCAAAGGACAAACGGGAGGTaGCTGGAATCCTGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: GPGARLPVQIRPPPRVRQRTNGR*LESCRG
Trigger: GCCCCTGCAGGATTCCAGGCACCTCCCGTTTGTCCT...TTGCCTTACTCGCGGTGGAGGCCGGATTTGCACGGGCAGACGTGCACCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp GACATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCAGCCTGCTGCATCCCTaGCGGCTGACGTCTGGAGTG +
Preference number: 2 (lower is better)
Translates to: DMARCGIIASVGPEGARASLLHP*RLTSGV
Trigger: CACTCCAGACGTCAGCCGGCAGGGATGCAGCAGGCT...GGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CCA 90 bp GGCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGGGGGCCCCTGCAGAGTaGCCAGCGGACGCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: GREHESSFVPVAGPTTEMGAPAE*PADALH
Trigger: GTGAAGGGCGTCCGCTGGCCACTCTGCAGGGGCCCC...CATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp CATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCCGGTGCGCGGCCAGCCAAGGTGAGAAGCATCTaGACTCAACCTGCAGAAGCG +
Preference number: 2 (lower is better)
Translates to: HHCQCGARGCPSPGARPAKVRSI*TQPAEA
Trigger: CGCTTCTGCAGGTTGAGTCCAGATGCTTCTCACCTT...GGCTGGCCGCGCACCGGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CCA 90 bp GGGGAGGTGGCTGTGACTCAGCCAGCTCCACAGCTTGTCCCTTCCTGCCACCAGCAACCAGAGGTGAGCTaGTTCCCCGGCTCTGGGACC +
Preference number: 2 (lower is better)
Translates to: GEVAVTQPAPQLVPSCHQQPEVS*FPGSGT
Trigger: GGTCCCAGAGCCGGGGAACCAGCTCACCTCTGGTTG...CTGGTGGCAGGAAGGGACAAGCTGTGGAGCTGGCTGAGTCACAGCCACCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CAA 90 bp TCTGGGACCCGACACCACTCAGGAAGCTTTCATCAGGCCCACGAGTaGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGAGTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: SGTRHHSGSFHQAHE*GSPSRAHLVPRVGA
Trigger: AGCCCCCACTCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAACTCGTGGGCCTGATGAAAGCTTCCTGAGTGGTGTCGGGTCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp CTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAGCCACCAGGCAGGCGGGGTCTaGGGAGGCTGGGTCATTTCT +
Preference number: 2 (lower is better)
Translates to: LPADVWSDRHSSDHPHSHQAGGV*GGWVIS
Trigger: AGAAATGACCCAGCCTCCTCAGACCCCGCCTGCCTG...GTGGCTATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCTGTGGACCTGGTGGCTaGCACGCTCGGGGAGCCGGT +
Preference number: 2 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSCGPGG*HARGAG
Trigger: ACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACA...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCTCCTGCAGGGGCCCCTaGAGAGTGGCCAGCGGACGC +
Preference number: 2 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSSCRGP*RVASGR
Trigger: GCGTCCGCTGGCCACTCTGCAGGGGCCCCTGCAGGA...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp CATCCCTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATACCCCTGACTGCTGCGTaGTGGGCACAGGACAGGCAG +
Preference number: 2 (lower is better)
Translates to: HPCRLTSGVTVIPVTTPIPLTAA*WAQDRQ
Trigger: CTGCCTGTCCTGTGCCCACCACGCAGCAGTCAGGGG...TATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR TCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATGACACACCCGCTGTATaGCGCGGCCAGGCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDDTPAV*RGQARL
Trigger: GAGCCTGGCCTGGCCGCGTCATACAGCGGGTGTGTC...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp GAGCCACCAGCTCTTGGGTTCGGCTGTCCGGGATCACAAGTAGACATGCCTCCGGGCCAAGAAGGGCCCTaGCATAGCAGATGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: EPPALGFGCPGSQVDMPPGQEGP*HSRWPL
Trigger: CAGGGGCCATCTGCTATGTCAGGGCCCTTCTTGGCC...CGGAGGCATGTCTACTTGTGATCCCGGACAGCCGAACCCAAGAGCTGGTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCCATAGGGCCCTCATCTaGCCACCTGCTCGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCAHRALI*PPARSS
Trigger: GGAGCTGCGAGCAGGTGGGCAGATGAGGGCCCTATG...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCGCTATAGAGGCTGTGTaGCCTCGGCCACACCGGGCA +
Preference number: 2 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCAAIEAV*PRPHRA
Trigger: TGCCCGGTGTGGCCGAGGGCACACAGCCTCTATAGC...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CCA 90 bp CATCCCTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATACCGAGACTCCGGACATaGCTTACCCTCTGGAGGGCC +
Preference number: 2 (lower is better)
Translates to: HPCRLTSGVTVIPVTTPIPRLRT*LTLWRA
Trigger: GGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG...TATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTACTCCAAATCGTTCCTTaGGCCCGAGACTCCGGACAT +
Preference number: 2 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLLQIVP*ARDSGH
Trigger: ATGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAG...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGGGGGCCCCTGCAGAGTaGCCAGCGGACGCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: DYKSALNARVSQHKGAHQGAPAE*PADALH
Trigger: GTGAAGGGCGTCCGCTGGCCACTCTGCAGGGGCCCC...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CAA 90 bp CTACCCAACACGGGAGGCCCTAACAAGCACCCTCCAAATCGTTCCTaGGGCCCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGT +
Preference number: 2 (lower is better)
Translates to: LPNTGGPNKHPPNRS*GPRLRTWLTLWRAS
Trigger: ACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAGGGTGCTTGTTAGGGCCTCCCGTGTTGGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp CTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTCGCTCGGGGAGCCGGTaGGAGGCTGACACACCCGCT +
Preference number: 2 (lower is better)
Translates to: LQKCFERACQPTQGSAPVRSGSR*EADTPA
Trigger: AGCGGGTGTGTCAGCCTCTCACCGGCTCCCCGAGCG...AACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp GGCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGGGCCAAGAAGGGCCCTaGCATAGCAGATGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: GREHESSFVPVAGPTTEMGQEGP*HSRWPL
Trigger: CAGGGGCCATCTGCTATGTCAGGGCCCTTCTTGGCC...CATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCAAGACATGGTCTCCATaGCCCCCAGGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCAKTWSP*PPGRDR
Trigger: CCTGTCCCTGCCTGGGGGTCATGGAGACCATGTCTT...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp GGGGAGGTGGCTGTGACTCAGCCAGCTCCACAGCTTGTCCCTTCCTGCCACCAGCCGTTTTCAAGAGGCTaGCCTGGTATCGTGCCATCC +
Preference number: 2 (lower is better)
Translates to: GEVAVTQPAPQLVPSCHQPFSRG*PGIVPS
Trigger: GGATGGCACGATACCAGGGCAGCCTCTTGAAAACGG...CTGGTGGCAGGAAGGGACAAGCTGTGGAGCTGGCTGAGTCACAGCCACCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATCCTCATCTGCCCACCTaGTCGCAGCTCCCGTCTCCC +
Preference number: 2 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDPHLPT*SQLPSP
Trigger: GGGAGACGGGAGCTGCGAGCAGGTGGGCAGATGAGG...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCATAGGGCCCTCATCTaGCCACCTGCTCGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSHRALI*PPARSS
Trigger: GGAGCTGCGAGCAGGTGGGCAGATGAGGGCCCTATG...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCAGGTGCCTGGAATCCTaGAGGGGCCCCTGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSRCLES*RGPCRV
Trigger: CACTCTGCAGGGGCCCCTGCAGGATTCCAGGCACCT...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GACATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCATTCACCCAACAACTaGCCTGGCCGCCTCCACATT +
Preference number: 2 (lower is better)
Translates to: DMARCGIIASVGPEGARAHSPNN*PGRLHI
Trigger: AATGTGGAGGCGGCCAGGGCAGTTGTTGGGTGAATG...GGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCATCAGGCCCACGAGTTaGGCTCCCCTTCAAGGGCCC +
Preference number: 2 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSIRPTS*APLQGP
Trigger: GGGCCCTTGAAGGGGAGCCCAACTCGTGGGCCTGAT...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATGGTGGGCTCCCTCTCTaGGACCCGACACCACTCAGG +
Preference number: 2 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDGGLPL*DPTPLR
Trigger: CCTGAGTGGTGTCGGGTCCCAGAGAGGGAGCCCACC...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp CTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTCCCCCAGGCAGCAGGTaGGCTCCCTCTCTGGGACCC +
Preference number: 2 (lower is better)
Translates to: LQKCFERACQPTQGSAPVPPGSR*APSLGP
Trigger: GGGTCCCAGAGAGGGAGCCCACCTGCTGCCTGGGGG...AACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATGTTCTGTGGACCTGGTaGCTGCCACGCTCGGGGAGC +
Preference number: 2 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDVLWTW*LPRSGS
Trigger: GCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAAC...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGGTAGTTCTGTGGACCTaGTGGCTGCCACGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVVVLWT*WLPRSG
Trigger: CCCCGAGCGTGGCAGCCACCAGGTCCACAGAACTAC...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp GACATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCTTTGTGCCGGTGGCTaGGCCTACAACAGAGATGCA +
Preference number: 2 (lower is better)
Translates to: DMARCGIIASVGPEGARALCAGG*AYNRDA
Trigger: TGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAG...GGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR TCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGGGGCTCCCCCTAAGCTaGCAAGGGCGTGGGCTTGTC +
Preference number: 2 (lower is better)
Translates to: DYKSALNARVSQHKGAHQGLPLS*QGRGLV
Trigger: GACAAGCCCACGCCCTTGTCAGCTTAGGGGGAGCCC...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp GGGGAGGTGGCTGTGACTCAGCCAGCTCCACAGCTTGTCCCTTCCTGCCACCAGCATGTGTCAGCCACCTaGGCTAGCAACACCATCTCT +
Preference number: 2 (lower is better)
Translates to: GEVAVTQPAPQLVPSCHQHVSAT*ASNTIS
Trigger: AGAGATGGTGTTGCTAGCTCAGGTGGCTGACACATG...CTGGTGGCAGGAAGGGACAAGCTGTGGAGCTGGCTGAGTCACAGCCACCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACTGTGGACCTGGTGGCTaGCACGCTCGGGGAGCCGGT +
Preference number: 2 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDCGPGG*HARGAG
Trigger: ACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACA...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACGGGGATACAGAGCGGTaGCCAGCTCTGCCGGGGACA +
Preference number: 2 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDGDTER*PALPGT
Trigger: TGTCCCCGGCAGAGCTGGGCACCGCTCTGTATCCCC...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGCCTCATCTGCCCACCTaGTCGCAGCTCCCGTCTCCC +
Preference number: 2 (lower is better)
Translates to: DYKSALNARVSQHKGAHQPHLPT*SQLPSP
Trigger: GGGAGACGGGAGCTGCGAGCAGGTGGGCAGATGAGG...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCACATGGCTTACCCTCTaGAGGGCCAGTCCAGCACCC +
Preference number: 2 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSTWLTL*RASPAP
Trigger: GGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGT...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGGGCTCCCCCTAAGCTaGCAAGGGCGTGGGCTTGTC +
Preference number: 2 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEGLPLS*QGRGLV
Trigger: GACAAGCCCACGCCCTTGTCAGCTTAGGGGGAGCCC...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTGCTGCCCTGGTATCGTaGCATCCCTACACTCACCGG +
Preference number: 2 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPAALVS*HPYTHR
Trigger: CCGGTGAGTGTAGGGATGGCACGATACCAGGGCAGC...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCCCCCCAGGCAGCAGGTaGGCTCCCTCTCTGGGACCC +
Preference number: 2 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFPPGSR*APSLGP
Trigger: GGGTCCCAGAGAGGGAGCCCACCTGCTGCCTGGGGG...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCCGGAGTAAAACTGAGTaGAAGAAGCTGCGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCRSKTE*KKLRGR
Trigger: TCGGCCCCGCAGCTTCTTTCACTCAGTTTTACTCCG...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTAGTGGCAGGCAAGGTTTaGGGGCAGGTCACCCACACC +
Preference number: 2 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVVAGKV*GQVTHT
Trigger: GGTGTGGGTGACCTGCCCTCAAACCTTGCCTGCCAC...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCTGAGTGAAAGAAGCTaGGGGGCCGACTCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPLSERS*GADSPE
Trigger: TTCTGGGGAGTCGGCCCCGCAGCTTCTTTCACTCAG...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp CTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTCCGAGACTCCGGACATaGCTTACCCTCTGGAGGGCC +
Preference number: 2 (lower is better)
Translates to: LQKCFERACQPTQGSAPVPRLRT*LTLWRA
Trigger: GGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG...AACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCTTCAAGAGGCTGCCCTaGTATCGTGCCATCCCTACA +
Preference number: 2 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCAFKRLP*YRAIPT
Trigger: TGTAGGGATGGCACGATACCAGGGCAGCCTCTTGAA...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACCAAACGGGAGGTGCCTaGAATCCTGCAGGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDQTGGA*NPAGAP
Trigger: AGGGGCCCCTGCAGGATTCCAGGCACCTCCCGTTTG...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp GGCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGAAGCTGACAAGGGCGTaGGCTTGTCTTGAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: GREHESSFVPVAGPTTEMKLTRA*ACLEVG
Trigger: ACCCACCTCAAGACAAGCCCACGCCCTTGTCAGCTT...CATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGAGCCGGTGAGAGGCTaGCACACCCGCTGTATGACG +
Preference number: 2 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMEPVRG*HTRCMT
Trigger: CGTCATACAGCGGGTGTGTCAGCCTCTCACCGGCTC...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCAGGGGATACAGAGCGGTaGCCAGCTCTGCCGGGGACA +
Preference number: 2 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPGDTER*PALPGT
Trigger: TGTCCCCGGCAGAGCTGGGCACCGCTCTGTATCCCC...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GGGGAGGTGGCTGTGACTCAGCCAGCTCCACAGCTTGTCCCTTCCTGCCACCAGCTAAGCCAGCCCAATTaGTATTGTTTGCAGAAGACG +
Preference number: 2 (lower is better)
Translates to: GEVAVTQPAPQLVPSCHQLSQPN*YCLQKT
Trigger: CGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAG...CTGGTGGCAGGAAGGGACAAGCTGTGGAGCTGGCTGAGTCACAGCCACCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCAGTTCTGTGGACCTGGTaGCTGCCACGCTCGGGGAGC +
Preference number: 2 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPVLWTW*LPRSGS
Trigger: GCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAAC...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCACCCTGCCCCAACGGTaGCAGAGCCATGGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFTLPQR*QSHGVS
Trigger: GCTGACCCCATGGCTCTGCCACCGTTGGGGCAGGGT...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGAAAAAGTGGGGGCTGTCGATaGCAGCACACCCCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: ACQPTQGSAPVIFSLMGKSGGCR*QHTPAL
Trigger: CAGGGCTGGGGTGTGCTGGCATCGACAGCCCCCACT...TTTTCCCATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGAGCTGTCCTCTGGGCTaGAGTAGTTCTGTGGACCTG +
Preference number: 2 (lower is better)
Translates to: DYKSALNARVSQHKGAHQSCPLG*SSSVDL
Trigger: CAGGTCCACAGAACTACTGCAGCCCAGAGGACAGCT...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp GGGGAGGTGGCTGTGACTCAGCCAGCTCCACAGCTTGTCCCTTCCTGCCACCAGAAGGCCAAATGGTTCTaGTGTTACAGAAGGAAGCAT +
Preference number: 2 (lower is better)
Translates to: GEVAVTQPAPQLVPSCHQKAKWF*CYRRKH
Trigger: ATGCTTCCTTCTGTAACACCAGAACCATTTGGCCTT...CTGGTGGCAGGAAGGGACAAGCTGTGGAGCTGGCTGAGTCACAGCCACCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR TCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCAGAACCTTCCCAAGCCTaGAGCAGGGAGACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPEPSQA*SRETWE
Trigger: CTCCCAGGTCTCCCTGCTTCAGGCTTGGGAAGGTTC...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCAGCCACAGAGAAGGGCTaGCATCTGCTAACCCTGCCC +
Preference number: 2 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPATEKG*HLLTLP
Trigger: GGGCAGGGTTAGCAGATGGCAGCCCTTCTCTGTGGC...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTATTGAGGTGGGTGATGTaGCCTGGTTACAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVLRWVM*PGYSQQ
Trigger: CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAA...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTGCTAGGCTCCTCGGATaGCCCAGGGTGAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLARLLG*PRVRSQ
Trigger: CTGGCTCCTCACCCTGGGGCATCCGAGGAGCCTAGC...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGCTCCAAATCGTTCCTTaGGCCCGAGACTCCGGACAT +
Preference number: 2 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQLQIVP*ARDSGH
Trigger: ATGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAG...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTAGGGCTTGTCTTGAGGTaGGTGATGTGCCCTGGTTAC +
Preference number: 2 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVGLVLR*VMCPGY
Trigger: GTAACCAGGGCACATCACCCACCTCAAGACAAGCCC...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR TCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTGAACCTTCCCAAGCCTaGAGCAGGGAGACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: SSTPGILSLTLELRPNGSEPSQA*SRETWE
Trigger: CTCCCAGGTCTCCCTGCTTCAGGCTTGGGAAGGTTC...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATATGCTTATCACTCAGTaGCCTGTCAGCCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDMLITQ*PVSHRE
Trigger: TTCTCTGTGGCTGACAGGTCACTGAGTGATAAGCAT...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCCTGAGTGAAAGAAGCTaGGGGGCCGACTCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFLSERS*GADSPE
Trigger: TTCTGGGGAGTCGGCCCCGCAGCTTCTTTCACTCAG...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAATGAATCCAGCTTTGTaGCGGTGGCTGGGCCTACAA +
Preference number: 2 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEMNPAL*RWLGLQ
Trigger: TTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCAT...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp CTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAGCCACCTGATTTTTAAGAAGTaGCACCCACATATTGGGAAC +
Preference number: 2 (lower is better)
Translates to: LPADVWSDRHSSDHPHSHLIFKK*HPHIGN
Trigger: GTTCCCAATATGTGGGTGGCACTTCTTAAAAATCAG...GTGGCTATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCAAGCTGTCCTCTGGGCTaGAGTAGTTCTGTGGACCTG +
Preference number: 2 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPSCPLG*SSSVDL
Trigger: CAGGTCCACAGAACTACTGCAGCCCAGAGGACAGCT...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTAGGACAAACGGGAGGTaGCTGGAATCCTGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLRTNGR*LESCRG
Trigger: GCCCCTGCAGGATTCCAGGCACCTCCCGTTTGTCCT...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTCCATGTGGTGGTGTCTaGAAGGCAGCCGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLPCGGV*KAAGEE
Trigger: CTCCTCTCCGGCTGCCTTGCAGACACCACCACATGG...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCCCAATTGCTATTGTTTaGAGAAGACGCCACATTCGC +
Preference number: 2 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSPIAIV*RRRHIR
Trigger: GCGAATGTGGCGTCTTCTGCAAACAATAGCAATTGG...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTCGGAGTAAAACTGAGTaGAAGAAGCTGCGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: SSTPGILSLTLELRPNGSRSKTE*KKLRGR
Trigger: TCGGCCCCGCAGCTTCTTTCACTCAGTTTTACTCCG...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTAAGGCCAAATGGTTCTaGTGTTACAGAAGGAAGCAT +
Preference number: 2 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFKAKWF*CYRRKH
Trigger: ATGCTTCCTTCTGTAACACCAGAACCATTTGGCCTT...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp CTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAGCCACCTGGCTACAAAAATTTaGTTGAAAAGTAAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: LPADVWSDRHSSDHPHSHLATKI*LKSKAF
Trigger: GAAAGCCTTACTTTTCAACCAAATTTTTGTAGCCAG...GTGGCTATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR GCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTCCGTTTTCAAGAGGCTaGCCTGGTATCGTGCCATCC +
Preference number: 2 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLPFSRG*PGIVPS
Trigger: GGATGGCACGATACCAGGGCAGCCTCTTGAAAACGG...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAACCAATTGCTATTGTTTaGAGAAGACGCCACATTCGC +
Preference number: 2 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEPIAIV*RRRHIR
Trigger: GCGAATGTGGCGTCTTCTGCAAACAATAGCAATTGG...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CAA 90 bp CTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTaGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTT +
Preference number: 2 (lower is better)
Translates to: LVHEDEQKQSDYKSA*NARVSQHKGAHQLF
Trigger: AAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR TCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCAATGCTTATCACTCAGTaGCCTGTCAGCCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPMLITQ*PVSHRE
Trigger: TTCTCTGTGGCTGACAGGTCACTGAGTGATAAGCAT...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CCA 90 bp CTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTGGAATTAAGGCCAAATaGTTCTGGTGTTACAGAAGG +
Preference number: 2 (lower is better)
Translates to: LQKCFERACQPTQGSAPVGIKAK*FWCYRR
Trigger: CCTTCTGTAACACCAGAACCATTTGGCCTTAATTCC...AACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp ATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGAGAGGTGAGCTGTCTGCCTaGTGCCCATGGGGACACCAA +
Preference number: 2 (lower is better)
Translates to: IEPGSFIYTVQVTSKFLRGELSA*CPWGHQ
Trigger: TTGGTGTCCCCATGGGCAGCAGGCAGACAGCTCACC...TCTCAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CCA 90 bp ATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGAGAACATGGCTTACCCTCTaGAGGGCCAGTCCAGCACCC +
Preference number: 2 (lower is better)
Translates to: IEPGSFIYTVQVTSKFLRTWLTL*RASPAP
Trigger: GGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGT...TCTCAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTGGAATTAAGGCCAAATaGTTCTGGTGTTACAGAAGG +
Preference number: 2 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLGIKAK*FWCYRR
Trigger: CCTTCTGTAACACCAGAACCATTTGGCCTTAATTCC...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR GCA 90 bp ATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGAGAGGCCGCCTCCACATTTaGTCTAAGAAGACATGGTCT +
Preference number: 2 (lower is better)
Translates to: IEPGSFIYTVQVTSKFLRGRLHI*SKKTWS
Trigger: AGACCATGTCTTCTTAGAGCAAATGTGGAGGCGGCC...TCTCAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CAA 90 bp CATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCCGGTGCGCGGCCAGCCCATCAGGCCCACGAGTaGGGCTCCCCTTCAAGGGCC +
Preference number: 3 (lower is better)
Translates to: HHCQCGARGCPSPGARPAHQAHE*GSPSRA
Trigger: GGCCCTTGAAGGGGAGCCCAACTCGTGGGCCTGATG...GGCTGGCCGCGCACCGGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR TCA 72 bp CTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTaGCACACCCGCTGTATGACGCGGCCAGGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: LVAATLGEPVRG*HTRCMTRPGQA
Trigger: AGCCTGGCCTGGCCGCGTCATACAGCGGGTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR TCA 72 bp GACGGCACGTCAGTGGAAACGGGGGTGCAGCAGGCATaGCACCAAGGCAGAGCCCGCAGCAGGGGGCCCGGG +
Preference number: 3 (lower is better)
Translates to: DGTSVETGVQQA*HQGRARSRGPG
Trigger: CCCGGGCCCCCTGCTGCGGGCTCTGCCTTGGTGTCATGCCTGCTGCACCCCCGTTTCCACTGACGTGCCGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 72 bp CCCGAGCCCCGGTGCGCGGCCAGCCTGCTGCATCCCTaGCGGCTGACGTCTGGAGTGACCGTCATTCCAGTG +
Preference number: 3 (lower is better)
Translates to: PEPRCAASLLHP*RLTSGVTVIPV
Trigger: CACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATGCAGCAGGCTGGCCGCGCACCGGGGCTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR TCA 72 bp GCCCCTGCAGAGTGGCCAGCGGACGCCCTTCACCCCTaGGTGCGCATAGGGCCCTCATCTGCCCACCTGCTC +
Preference number: 3 (lower is better)
Translates to: APAEWPADALHP*VRIGPSSAHLL
Trigger: GAGCAGGTGGGCAGATGAGGGCCCTATGCGCACTCAGGGGTGAAGGGCGTCCGCTGGCCACTCTGCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR GCA 72 bp CAGCAGGGGGCCCGGGGTTCCACAGCTAGGGAAGCTTaGTCAGACAGGCAGCACACCCAGGGCACGGCCACT +
Preference number: 3 (lower is better)
Translates to: QQGARGSTAREA*SDRQHTQGTAT
Trigger: AGTGGCCGTGCCCTGGGTGTGCTGCCTGTCTGAGCAAGCTTCCCTAGCTGTGGAACCCCGGGCCCCCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CCA 72 bp GGGCGGGCAGACCCTGGGCCCCGGGTCTACGCTTTCTaGTCGCCACACTTCCTGAAGCACGGCAACACCCAC +
Preference number: 3 (lower is better)
Translates to: GRADPGPRVYAF*SPHFLKHGNTH
Trigger: GTGGGTGTTGCCGTGCTTCAGGAAGTGTGGCGACCAGAAAGCGTAGACCCGGGGCCCAGGGTCTGCCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 72 bp TACGTCTGGTCAGAACAAGCTCCCCACGGGCCCAGGTaGACGTCTGCCCGTGCAAATCCGGCCTCCACCGCG +
Preference number: 3 (lower is better)
Translates to: YVWSEQAPHGPR*TSARANPASTA
Trigger: CGCGGTGGAGGCCGGATTTGCACGGGCAGACGTGCACCTGGGCCCGTGGGGAGCTTGTTCTGACCAGACGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CCA 72 bp CGCGGCCAGCCTGCTGCATCCCTGCCGGCTGACGTCTaGAGTGACCGTCATTCCAGTGACCACCCCCATAGC +
Preference number: 3 (lower is better)
Translates to: RGQPAASLPADV*SDRHSSDHPHS
Trigger: GCTATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATGCAGCAGGCTGGCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 72 bp CTGCCTTCCACAGGAAGGCCTGCTATAGAGGCTGTGTaGCCTCGGCCACACCGGGCATGTGGTGCCAGGACC +
Preference number: 3 (lower is better)
Translates to: LPSTGRPAIEAV*PRPHRACGART
Trigger: GGTCCTGGCACCACATGCCCGGTGTGGCCGAGGGCACACAGCCTCTATAGCAGGCCTTCCTGTGGAAGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CCA 72 bp GCTACAGCAACCAGAGGTGAGCTGGTTCCCCGGCTCTaGGACCTGCCCAGTGCCCGGCATACCCCATGTGTC +
Preference number: 3 (lower is better)
Translates to: ATATRGELVPRL*DLPSARHTPCV
Trigger: GACACATGGGGTATGCCGGGCACTGGGCAGGTCCCAGAGCCGGGGAACCAGCTCACCTCTGGTTGCTGTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 72 bp CGCCCAGTGGTACTCCGGGGGCAAGACATGGCCATGTaGTCTCCACATTCACCCAACAACTGCCCTGGCCGC +
Preference number: 3 (lower is better)
Translates to: RPVVLRGQDMAM*SPHSPNNCPGR
Trigger: GCGGCCAGGGCAGTTGTTGGGTGAATGTGGAGAGCACATGGCCATGTCTTGCCCCCGGAGTACCACTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CCA 72 bp TCCTTGGGCCCGAGACTCCGGACATGGCTTACCCTCTaGAGGGCCAGTCCAGCACCCCAGGGATTCTGTCTC +
Preference number: 3 (lower is better)
Translates to: SLGPRLRTWLTL*RASPAPQGFCL
Trigger: GAGACAGAATCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGGGCCCAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 72 bp CCTCCAAATCGTTCCTTGGGCCCGAGACTCCGGACATaGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAG +
Preference number: 3 (lower is better)
Translates to: PPNRSLGPRLRT*LTLWRASPAPQ
Trigger: CTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CAA 90 bp ACGCCCAGTGGTACTCCGGGGGCAAGACATGGCCATGTGCTCTCCACATTCACCCAGAGCCACCAGCTCTaGGGTTCGGCTGTCCGGGAT +
Preference number: 3 (lower is better)
Translates to: TPSGTPGARHGHVLSTFTQSHQL*GSAVRD
Trigger: ATCCCGGACAGCCGAACCCAAGAGCTGGTGGCTCTG...GGTGAATGTGGAGAGCACATGGCCATGTCTTGCCCCCGGAGTACCACTGGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR TCA 72 bp GGCCCCGGGTCTACGCTTTCTGGTCGCCACACTTCCTaGAGCACGGCAACACCCACAACATCCAGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: GPGSTLSGRHTS*STATPTTSSSG
Trigger: CCCTGAGCTGGATGTTGTGGGTGTTGCCGTGCTTCAGGAAGTGTGGCGACCAGAAAGCGTAGACCCGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 72 bp CGCAGCTCCCGTCTCCCGAGGCCGTTTTCAAGAGGCTaGCCTGGTATCGTGCCATCCCTACACTCACCGGAA +
Preference number: 3 (lower is better)
Translates to: RSSRLPRPFSRG*PGIVPSLHSPE
Trigger: TTCCGGTGAGTGTAGGGATGGCACGATACCAGGGCAGCCTCTTGAAAACGGCCTCGGGAGACGGGAGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR GCA 72 bp GGTGGGGTAGGGGCAGGGAGCATGAATCCAGCTTTGTaGCGGTGGCTGGGCCTACAACAGAGATGCAGCCCT +
Preference number: 3 (lower is better)
Translates to: GGVGAGSMNPAL*RWLGLQQRCSP
Trigger: AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCCCCTACCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 72 bp TGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTaGGCTCCCCCTAAGCTGACAAGGGCGTGGGCTTGT +
Preference number: 3 (lower is better)
Translates to: WLGLQQRCSPQD*APPKLTRAWAC
Trigger: ACAAGCCCACGCCCTTGTCAGCTTAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 72 bp GAGGGGTTTGACCAACAGCGTGGACATGGCAAGGTGTaGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCG +
Preference number: 3 (lower is better)
Translates to: EGFDQQRGHGKV*HHCQCGARGCP
Trigger: CGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTCCACGCTGTTGGTCAAACCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CAA 90 bp CAGAGGGGTTTGACCAACAGCGTGGACATGGCAAGGTGTGGCATCATTGCCAGTGTCGATGGGACCAGCTaGCGGGGAGGTGGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: QRGLTNSVDMARCGIIASVDGTS*RGGGEV
Trigger: CACCTCCCCACCTCCCCGCAAGCTGGTCCCATCGAC...ACTGGCAATGATGCCACACCTTGCCATGTCCACGCTGTTGGTCAAACCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR TCA 72 bp AGAGATGCAGCCCTCAGGACTGGGCTCCCCCTAAGCTaGCAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATG +
Preference number: 3 (lower is better)
Translates to: RDAALRTGLPLS*QGRGLVLRWVM
Trigger: CATCACCCACCTCAAGACAAGCCCACGCCCTTGTCAGCTTAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 72 bp CGGGAGGCCCTAACAAGCACCCTCCAAATCGTTCCTTaGGCCCGAGACTCCGGACATGGCTTACCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: REALTSTLQIVP*ARDSGHGLPSG
Trigger: TCCAGAGGGTAAGCCATGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAGGGTGCTTGTTAGGGCCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 72 bp CTCCCGTCTCCCGAGGCCGTTTTCAAGAGGCTGCCCTaGTATCGTGCCATCCCTACACTCACCGGAACCAAC +
Preference number: 3 (lower is better)
Translates to: LPSPEAVFKRLP*YRAIPTLTGTN
Trigger: GTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGGGCAGCCTCTTGAAAACGGCCTCGGGAGACGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR GCA 72 bp CGGCAACACCCACAACATCCAGCTCAGGGAAGCCCCTaGAGCCCCAGAAACAGCCTATGTGCTATCTGTCGC +
Preference number: 3 (lower is better)
Translates to: RQHPQHPAQGSP*SPRNSLCAICR
Trigger: GCGACAGATAGCACATAGGCTGTTTCTGGGGCTGCAGGGGCTTCCCTGAGCTGGATGTTGTGGGTGTTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CCA 72 bp AGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTaGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAG +
Preference number: 3 (lower is better)
Translates to: RAWACLEVGDVP*LQPAVLKDKRE
Trigger: CTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 72 bp GCTGCTCCGGGCAGTGTGGCAGCTTGGATGATGGGGTaGCACCTTATAGATAGGGTCTACTCCCTCCAGTCA +
Preference number: 3 (lower is better)
Translates to: AAPGSVAAWMMG*HLIDRVYSLQS
Trigger: TGACTGGAGGGAGTAGACCCTATCTATAAGGTGCCACCCCATCATCCAAGCTGCCACACTGCCCGGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CAA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCCATCAGGCCCACGAGTaGGGCTCCCCTTCAAGGGCC +
Preference number: 3 (lower is better)
Translates to: GEASKSVFSANRSTKFLPHQAHE*GSPSRA
Trigger: GGCCCTTGAAGGGGAGCCCAACTCGTGGGCCTGATG...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CAA 90 bp CTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTCCTCCAAATCGTTCCTaGGGCCCGAGACTCCGGACA +
Preference number: 3 (lower is better)
Translates to: LQKCFERACQPTQGSAPVPPNRS*GPRLRT
Trigger: TGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAGG...AACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CAA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCCCAGCCCAATTGCTATaGTTTGCAGAAGACGCCACA +
Preference number: 3 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCAPAQLL*FAEDAT
Trigger: TGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGG...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR GCA 72 bp TCCCGAGGCCGTTTTCAAGAGGCTGCCCTGGTATCGTaGCATCCCTACACTCACCGGAACCAACCATGCTTA +
Preference number: 3 (lower is better)
Translates to: SRGRFQEAALVS*HPYTHRNQPCL
Trigger: TAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGGGCAGCCTCTTGAAAACGGCCTCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CCA 72 bp CCAAGATGTCTCTGTCTGCTCAGAGCCACCAGCTCTTaGGTTCGGCTGTCCGGGATCACAAGTAGACATGCC +
Preference number: 3 (lower is better)
Translates to: PRCLCLLRATSS*VRLSGITSRHA
Trigger: GGCATGTCTACTTGTGATCCCGGACAGCCGAACCCAAGAGCTGGTGGCTCTGAGCAGACAGAGACATCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CAA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCAGGGCGTGGGCTTGTCTaGAGGTGGGTGATGTGCCCT +
Preference number: 3 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPGRGLV*RWVMCP
Trigger: AGGGCACATCACCCACCTCAAGACAAGCCCACGCCC...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR TCA 72 bp CTACACTCACCGGAACCAACCATGCTTATCACTCAGTaGCCTGTCAGCCACAGAGAAGGGCTGCCATCTGCT +
Preference number: 3 (lower is better)
Translates to: LHSPEPTMLITQ*PVSHREGLPSA
Trigger: AGCAGATGGCAGCCCTTCTCTGTGGCTGACAGGTCACTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR GCA 72 bp GACATGGCCATGTGCTCTCCACATTCACCCAACAACTaGCCTGGCCGCCTCCACATTTGCTCTAAGAAGACA +
Preference number: 3 (lower is better)
Translates to: DMAMCSPHSPNN*PGRLHICSKKT
Trigger: TGTCTTCTTAGAGCAAATGTGGAGGCGGCCAGGGCAGTTGTTGGGTGAATGTGGAGAGCACATGGCCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CAA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTGGGCGTGGGCTTGTCTaGAGGTGGGTGATGTGCCCT +
Preference number: 3 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLGRGLV*RWVMCP
Trigger: AGGGCACATCACCCACCTCAAGACAAGCCCACGCCC...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CAA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGAGGAGCTACAAACCTaGAGAGGAGAGCAAACCCTC +
Preference number: 3 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMEELQT*RGEQTL
Trigger: GAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTCCTC...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR-3UTR CAA 90 bp CAGAGGGGTTTGACCAACAGCGTGGACATGGCAAGGTGTGGCATCATTGCCAGTCCCAATTGCTATTGTTaGCAGAAGACGCCACATTCG +
Preference number: 3 (lower is better)
Translates to: QRGLTNSVDMARCGIIASPNCYC*QKTPHS
Trigger: CGAATGTGGCGTCTTCTGCAAACAATAGCAATTGGG...ACTGGCAATGATGCCACACCTTGCCATGTCCACGCTGTTGGTCAAACCCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR-3UTR CAA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTAGACTACAAAAGTGCTTaGAACGCGCGTGTCAGCCAA +
Preference number: 3 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVDYKSA*NARVSQ
Trigger: TTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CCA 72 bp TCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTaGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCC +
Preference number: 3 (lower is better)
Translates to: SVSHIGIKAKWF*CYRRKHLPNLP
Trigger: GGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACCAGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR GCA 72 bp CTTTCTGCCAGCTCCTTAAAGCTGATTTTTAAGAAGTaGCACCCACATATTGGGAACTTGAACCACCATCCT +
Preference number: 3 (lower is better)
Translates to: LSASSLKLIFKK*HPHIGNLNHHP
Trigger: AGGATGGTGGTTCAAGTTCCCAATATGTGGGTGGCACTTCTTAAAAATCAGCTTTAAGGAGCTGGCAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CCA 72 bp TTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTaGACTGCTTCCTCTAAGACTCAGCCACCGCCTGTA +
Preference number: 3 (lower is better)
Translates to: FKLYMWLEFWFH*TASSKTQPPPV
Trigger: TACAGGCGGTGGCTGAGTCTTAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280780.6
3UTR CCA 72 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTaGTTTCACTGGACTGCTTCCTCTAAGACTCAGCCA +
Preference number: 3 (lower is better)
Translates to: TRNFKLYMWLEF*FHWTASSKTQP
Trigger: TGGCTGAGTCTTAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp CATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCCGGTGCGCGGCCAGCCCCCTGGGCCGGAGGCTaGGAGCAGGGCGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HHCQCGARGCPSPGARPAPWAGG*EQGGPG
Trigger: GCCTGGACCGCCCTGCTCTCAGCCTCCGGCCCAGGG...GGCTGGCCGCGCACCGGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp CATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCCGGTGCGCGGCCAGCCTGTGGACCTGGTGGCTaGCACGCTCGGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: HHCQCGARGCPSPGARPACGPGG*HARGAG
Trigger: ACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACA...GGCTGGCCGCGCACCGGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCCGGTGCGCGGCCAGCCTCAGGGCTGTGGGGCTaGGGGCTTTCTGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HHCQCGARGCPSPGARPASGLWG*GLSASS
Trigger: GGAGCTGGCAGAAAGCCCCCAGCCCCACAGCCCTGA...GGCTGGCCGCGCACCGGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp TTGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGAGTGGGGGCTGTCGATGCCGCGGTCCCGCCAGGCTaGAGCCGGCTCCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LGSPSRAHLVPRVGAVDAAVPPG*SRLRSP
Trigger: AGGAGAGCGGAGCCGGCTGCAGCCTGGCGGGACCGC...GGCATCGACAGCCCCCACTCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp CATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCCGGTGCGCGGCCAGCCCAGCTCCCCGGGTGCTaGGGCTTTCACTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: HHCQCGARGCPSPGARPAQLPGC*GFHLGP
Trigger: TGGTCCTAAGTGAAAGCCTCAGCACCCGGGGAGCTG...GGCTGGCCGCGCACCGGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTACGCTCGGGGAGCCGGTaGGAGGCTGACACACCCGCT +
Preference number: 4 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLRSGSR*EADTPA
Trigger: AGCGGGTGTGTCAGCCTCTCACCGGCTCCCCGAGCG...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp TTGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGAGTGGGGGCTGTCGATGCCTGTGGTCAACTCCTGTaGGCGGCGGGGCGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LGSPSRAHLVPRVGAVDACGQLL*AAGRSG
Trigger: CCCGGAGCGCCCCGCCGCGCACAGGAGTTGACCACA...GGCATCGACAGCCCCCACTCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGATCCTGCAGGGGCCCCTaGAGAGTGGCCAGCGGACGC +
Preference number: 4 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGSCRGP*RVASGR
Trigger: GCGTCCGCTGGCCACTCTGCAGGGGCCCCTGCAGGA...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTACTGGTTCCCCGGCTCTaGGACCTGCCCAGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLLVPRL*DLPSAR
Trigger: CCGGGCACTGGGCAGGTCCCAGAGCCGGGGAACCAG...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGAGGGGCGGGCAGACCCTaGGCCCCGGGTCTACGCTTT +
Preference number: 4 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGGAGRP*APGLRF
Trigger: AAAGCGTAGACCCGGGGCCCAGGGTCTGCCCGCCCC...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTATGCCTGGTCGCAGGGTaGGGAGAGCACGTTGGCCCG +
Preference number: 4 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLCLVAG*GEHVGP
Trigger: CGGGCCAACGTGCTCTCCTCACCCTGCGACCAGGCA...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGACTGTCCACACGGGGCTaGGCCTGGCACCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGLSTRG*AWHPLA
Trigger: TGCCAAGGGGTGCCAGGCTCAGCCCCGTGTGGACAG...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GGCCCAGGTGCACGTCTGCCCGTGCAAATCCGGCCTCCACCGCGAGTAAGGCAAGGGCTCCCCCTAAGCTaGCAAGGGCGTGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GPGARLPVQIRPPPRVRQGLPLS*QGRGLV
Trigger: GACAAGCCCACGCCCTTGTCAGCTTAGGGGGAGCCC...TTGCCTTACTCGCGGTGGAGGCCGGATTTGCACGGGCAGACGTGCACCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGACAAGAGAGGGACCGCTaGAGGTCCAGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGQERDR*RSSRPP
Trigger: AGGAGGCCGGCTGGACCTGCAGCGGTCCCTCTCTTG...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GGCCCAGGTGCACGTCTGCCCGTGCAAATCCGGCCTCCACCGCGAGTAAGGCAAGCTAGGCTCCTCGGATaGCCCAGGGTGAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GPGARLPVQIRPPPRVRQARLLG*PRVRSQ
Trigger: CTGGCTCCTCACCCTGGGGCATCCGAGGAGCCTAGC...TTGCCTTACTCGCGGTGGAGGCCGGATTTGCACGGGCAGACGTGCACCTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GGCCCAGGTGCACGTCTGCCCGTGCAAATCCGGCCTCCACCGCGAGTAAGGCAACTGGTGTTGCTGACGTaGCGGGCGAAGGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPGARLPVQIRPPPRVRQLVLLT*RAKGLW
Trigger: CCAGAGCCCCTTCGCCCGCCACGTCAGCAACACCAG...TTGCCTTACTCGCGGTGGAGGCCGGATTTGCACGGGCAGACGTGCACCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp TTGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGAGTGGGGGCTGTCGATGCCCTGGTGTTGCTGACGTaGCGGGCGAAGGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGSPSRAHLVPRVGAVDALVLLT*RAKGLW
Trigger: CCAGAGCCCCTTCGCCCGCCACGTCAGCAACACCAG...GGCATCGACAGCCCCCACTCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTAGTTCTGTGGACCTGGTaGCTGCCACGCTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLVLWTW*LPRSGS
Trigger: GCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAAC...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGACCCCTGACTGCTGCGTaGTGGGCACAGGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGPLTAA*WAQDRQ
Trigger: CTGCCTGTCCTGTGCCCACCACGCAGCAGTCAGGGG...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CAA 72 bp CTGGGTCATTTCTCCCTAAGCGCCCTGGGGCTGGGCTaGCTGGTCGATGGGACCAGCTTGCGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGHFSLSALGLG*LVDGTSLRGGG
Trigger: CCCACCTCCCCGCAAGCTGGTCCCATCGACCAGCAAGCCCAGCCCCAGGGCGCTTAGGGAGAAATGACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGAACCCCTTGGCAGGGCTaGCCTCCAAATCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGTPWQG*PPNRWW
Trigger: CCACCACCGATTTGGAGGGCAGCCCTGCCAAGGGGT...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGGCGGTCCCGCCAGGCTaGAGCCGGCTCCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVAVPPG*SRLRSP
Trigger: AGGAGAGCGGAGCCGGCTGCAGCCTGGCGGGACCGC...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGAAGCGGTGCCCAGCTCTaGCGGGGACAACAGAGACTG +
Preference number: 4 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGSGAQL*RGQQRL
Trigger: CAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCT...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CATCCCTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATATCCTGCAGGGGCCCCTaGAGAGTGGCCAGCGGACGC +
Preference number: 4 (lower is better)
Translates to: HPCRLTSGVTVIPVTTPISCRGP*RVASGR
Trigger: GCGTCCGCTGGCCACTCTGCAGGGGCCCCTGCAGGA...TATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACCTGGGACCTGCCCAGTaGCCGGCATACCCCATGTGT +
Preference number: 4 (lower is better)
Translates to: FCGPGGCHARGAGERLTHLGPAQ*PAYPMC
Trigger: ACACATGGGGTATGCCGGGCACTGGGCAGGTCCCAG...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACAGCCTGCTGCATCCCTaGCGGCTGACGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: FCGPGGCHARGAGERLTHSLLHP*RLTSGV
Trigger: CACTCCAGACGTCAGCCGGCAGGGATGCAGCAGGCT...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACTTGGCCACTCACCCTTaGGGTGGGGCCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: FCGPGGCHARGAGERLTHLATHP*GGALLG
Trigger: TCCCAGAAGGGCCCCACCCCAAGGGTGAGTGGCCAA...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGCCCCCAGGCAGCAGGTaGGCTCCCTCTCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQPPGSR*APSLGP
Trigger: GGGTCCCAGAGAGGGAGCCCACCTGCTGCCTGGGGG...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTACCGAGACTCCGGACATaGCTTACCCTCTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLPRLRT*LTLWRA
Trigger: GGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTACAGACGGCACGTCAGTaGAAACGGGGGTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLQTARQ*KRGCSR
Trigger: CCTGCTGCACCCCCGTTTCCACTGACGTGCCGTCTG...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCAGGCCCTGGTGTTGCTaGCGTGGCGGGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSRPWCC*RGGRRG
Trigger: GCCCCTTCGCCCGCCACGTCAGCAACACCAGGGCCT...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTGCGCGCACGCTCGCCTaGCGGCGCCGAGCGCTTTGT +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFARTLA*RRRALC
Trigger: ACAAAGCGCTCGGCGCCGGCAGGCGAGCGTGCGCGC...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCACACCCCAGCCCTaGCTGGGCCCACACCCCCTC +
Preference number: 4 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCSTPQP*LGPHPL
Trigger: GAGGGGGTGTGGGCCCAGGCAGGGCTGGGGTGTGCT...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp TTGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGAGTGGGGGCTGTCGATGCCCACTCACCCTTGGGGTaGGGCCCTTCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: LGSPSRAHLVPRVGAVDAHSPLG*GPSGKW
Trigger: CCATTTCCCAGAAGGGCCCCACCCCAAGGGTGAGTG...GGCATCGACAGCCCCCACTCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACAGGTCCCACATGCAATaGAGTCAGCTCCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: FCGPGGCHARGAGERLTHRSHMQ*SQLPGC
Trigger: GCACCCGGGGAGCTGACTCCATTGCATGTGGGACCT...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp CTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAGCCACCAGGGCGCAGCTGTCTaGCTCCTCACAGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: LPADVWSDRHSSDHPHSHQGAAV*LLTGQV
Trigger: GACCTGTCCTGTGAGGAGTCAGACAGCTGCGCCCTG...GTGGCTATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp AGAGCGGTGCCCAGCTCTGCCGGGGACAACAGAGACTGCCCAACATCCCACAGGGAACCTTCCCAAGCCTaGAGCAGGGAGACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RAVPSSAGDNRDCPTSHREPSQA*SRETWE
Trigger: CTCCCAGGTCTCCCTGCTTCAGGCTTGGGAAGGTTC...CCTGTGGGATGTTGGGCAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp ACGCCCAGTGGTACTCCGGGGGCAAGACATGGCCATGTGCTCTCCACATTCACCGACGCCCTTCACCCCTaGGTGCGCATAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TPSGTPGARHGHVLSTFTDALHP*VRIGPS
Trigger: TGAGGGCCCTATGCGCACTCAGGGGTGAAGGGCGTC...GGTGAATGTGGAGAGCACATGGCCATGTCTTGCCCCCGGAGTACCACTGGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGAGTGTTGAGGCAGGTGTaGTGTTGGCTGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGVLRQV*CWLRED
Trigger: GTCCTCCCTCAGCCAACAGCACACCTGCCTCAACAC...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAGCCACGCAGTCCTCTGTCCCTaGGCTCAGGCAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPADVWSDRHSSDHPHSHAVLCP*AQAAEA
Trigger: AGCCTCAGCTGCCTGAGCGCAGGGACAGAGGACTGC...GTGGCTATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp ACGCCCAGTGGTACTCCGGGGGCAAGACATGGCCATGTGCTCTCCACATTCACCAGTGGGGGCTGTCGATaGCAGCACACCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TPSGTPGARHGHVLSTFTSGGCR*QHTPAL
Trigger: CAGGGCTGGGGTGTGCTGGCATCGACAGCCCCCACT...GGTGAATGTGGAGAGCACATGGCCATGTCTTGCCCCCGGAGTACCACTGGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GACATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCTCCCTCACTGCCTCTaGCTTCCACAGGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DMARCGIIASVGPEGARALPHCL*LPQEGL
Trigger: CAGGCCTTCCTGTGGAAGGCAGAGGCAGTGAGGGAG...GGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGCCGCCCCGGCTTTCCTaGAGGCTTAGCCCGCGCTTT +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQPPRLS*RLSPRF
Trigger: AAAGCGCGGGCTAAGCCTGCAGGAAAGCCGGGGCGG...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTATCTGCACCCGCTCCTaGAAGGCGAGCGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFICTRS*KASAAA
Trigger: CGCCGCCGCGCTCGCCTTGCAGGAGCGGGTGCAGAT...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTAGGGGTGGGGCCCTTCTaGGAAATGGCCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLGVGPF*EMAKCG
Trigger: ACCACATTTGGCCATTTCCCAGAAGGGCCCCACCCC...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACGAGGGGTTCCCGTTGTaGTCGCTGATGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FCGPGGCHARGAGERLTHEGFPL*SLMLRS
Trigger: AGACCTCAGCATCAGCGACCACAACGGGAACCCCTC...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGGGAGGTGGCTGTGACTCAGCCAGCTCCACAGCTTGTCCCTTCCTGCCACCAGCGGGAGTCCAGACTTTaGAGCCCAAGGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: GEVAVTQPAPQLVPSCHQRESRL*SPRASM
Trigger: CATGGAGGCCCTTGGGCTCCAAAGTCTGGACTCCCG...CTGGTGGCAGGAAGGGACAAGCTGTGGAGCTGGCTGAGTCACAGCCACCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GGGGAGGTGGCTGTGACTCAGCCAGCTCCACAGCTTGTCCCTTCCTGCCACCAGTGCCCTCCAAATCGGTaGTGGAGTCCTGCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GEVAVTQPAPQLVPSCHQCPPNR*WSPAWS
Trigger: CGACCAGGCAGGACTCCACCACCGATTTGGAGGGCA...CTGGTGGCAGGAAGGGACAAGCTGTGGAGCTGGCTGAGTCACAGCCACCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATCCCCCAGGCAGCAGGTaGGCTCCCTCTCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDPPGSR*APSLGP
Trigger: GGGTCCCAGAGAGGGAGCCCACCTGCTGCCTGGGGG...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGACCCTGCCCCAACGGTaGCAGAGCCATGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQTLPQR*QSHGVS
Trigger: GCTGACCCCATGGCTCTGCCACCGTTGGGGCAGGGT...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGCCCAGGTGCACGTCTGCCCGTGCAAATCCGGCCTCCACCGCGAGTAAGGCAACCAGCTTTGTGCCGGTaGCTGGGCCTACAACAGAGA +
Preference number: 4 (lower is better)
Translates to: GPGARLPVQIRPPPRVRQPALCR*LGLQQR
Trigger: TCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGG...TTGCCTTACTCGCGGTGGAGGCCGGATTTGCACGGGCAGACGTGCACCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTACCAGCTTTGTGCCGGTaGCTGGGCCTACAACAGAGA +
Preference number: 4 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLPALCR*LGLQQR
Trigger: TCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGG...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGCTGACTGCTGCGTGGTaGGCACAGGACAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQLTAAW*AQDRQA
Trigger: CGCCTGCCTGTCCTGTGCCCACCACGCAGCAGTCAG...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGGCCACTGCCCCCAGCTaGGGCCATCATGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVATAPS*GHHAGG
Trigger: CCCACCAGCATGATGGCCCCAGCTGGGGGCAGTGGC...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp AGAGCGGTGCCCAGCTCTGCCGGGGACAACAGAGACTGCCCAACATCCCACAGGGTGGACGGCAGCCCCTaGCAGTTTGGTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: RAVPSSAGDNRDCPTSHRVDGSP*QFGGFG
Trigger: TCCAAAGCCACCAAACTGCCAGGGGCTGCCGTCCAC...CCTGTGGGATGTTGGGCAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CAGAGGGGTTTGACCAACAGCGTGGACATGGCAAGGTGTGGCATCATTGCCAGTCCTGGGCCCCACGGGTaGACGGCAGCCCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QRGLTNSVDMARCGIIASPGPHG*TAAPGS
Trigger: ACTGCCAGGGGCTGCCGTCCACCCGTGGGGCCCAGG...ACTGGCAATGATGCCACACCTTGCCATGTCCACGCTGTTGGTCAAACCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGCTTGCTAGGGGGTGCTaGGGGGTTCCCGTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQLARGC*GVPVVV
Trigger: GACCACAACGGGAACCCCTCAGCACCCCCTAGCAAG...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACGGAAAACTGCTCATGTaGGCAAGAGAGGGACCGCTG +
Preference number: 4 (lower is better)
Translates to: FCGPGGCHARGAGERLTHGKLLM*AREGPL
Trigger: CAGCGGTCCCTCTCTTGCTCACATGAGCAGTTTTCC...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp CATCCCTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAGGCCAAGAAGGGCCCTaGCATAGCAGATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HPCRLTSGVTVIPVTTPIGQEGP*HSRWPL
Trigger: CAGGGGCCATCTGCTATGTCAGGGCCCTTCTTGGCC...TATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp GAGCCACCAGCTCTTGGGTTCGGCTGTCCGGGATCACAAGTAGACATGCCTCCGGTGGCAGGCAAGGTTTaGGGGCAGGTCACCCACACC +
Preference number: 4 (lower is better)
Translates to: EPPALGFGCPGSQVDMPPVAGKV*GQVTHT
Trigger: GGTGTGGGTGACCTGCCCTCAAACCTTGCCTGCCAC...CGGAGGCATGTCTACTTGTGATCCCGGACAGCCGAACCCAAGAGCTGGTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCAATAGCGCTGGACGCTaGCCCCGCTGTAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCANSAGR*PRCSSV
Trigger: GACGCTGCTACAGCGGGGGCAGCGTCCAGCGCTATT...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCCAAGAGAGGGACCGCTaGAGGTCCAGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCQERDR*RSSRPP
Trigger: AGGAGGCCGGCTGGACCTGCAGCGGTCCCTCTCTTG...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCCCGGCTCCGCTCTCCTaGCACAATCCTCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCPAPLS*HNPRPG
Trigger: CCCTGGACGAGGATTGTGGCAGGAGAGCGGAGCCGG...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GGCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGGGGGATACAGAGCGGTaGCCAGCTCTGCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: GREHESSFVPVAGPTTEMGDTER*PALPGT
Trigger: TGTCCCCGGCAGAGCTGGGCACCGCTCTGTATCCCC...CATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCGGGGATACAGAGCGGTaGCCAGCTCTGCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSGDTER*PALPGT
Trigger: TGTCCCCGGCAGAGCTGGGCACCGCTCTGTATCCCC...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCCTTCCACAGGAAGGCCTaGTATAGAGGCTGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: HGKVWHHCQCGARGCPSPFHRKA*YRGCVP
Trigger: GGGCACACAGCCTCTATAGCAGGCCTTCCTGTGGAA...GGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTAGTGCCCGAGCCCCGGTaGGCGGCCAGCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVVPEPR*AASLLH
Trigger: ATGCAGCAGGCTGGCCGCGCACCGGGGCTCGGGCAC...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCCAGCCTGGCTCCATCTaGACCCGCTCCTGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCQPGSI*TRSCKA
Trigger: CGCCTTGCAGGAGCGGGTGCAGATGGAGCCAGGCTG...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CCA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGTGCGGGAAAGGCCGCTaGAGCGTCTCGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVCGKGR*SVSPAL
Trigger: CAGAGCTGGCGAGACGCTCCAGCGGCCTTTCCCGCA...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CATCCCTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAGTAGTTCTGTGGACCTaGTGGCTGCCACGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: HPCRLTSGVTVIPVTTPIVVLWT*WLPRSG
Trigger: CCCCGAGCGTGGCAGCCACCAGGTCCACAGAACTAC...TATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GGCCCAGGTGCACGTCTGCCCGTGCAAATCCGGCCTCCACCGCGAGTAAGGCAACTCCAAATCGTTCCTTaGGCCCGAGACTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: GPGARLPVQIRPPPRVRQLQIVP*ARDSGH
Trigger: ATGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAG...TTGCCTTACTCGCGGTGGAGGCCGGATTTGCACGGGCAGACGTGCACCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GAGCCACCAGCTCTTGGGTTCGGCTGTCCGGGATCACAAGTAGACATGCCTCCGCAAACGGGAGGTGCCTaGAATCCTGCAGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: EPPALGFGCPGSQVDMPPQTGGA*NPAGAP
Trigger: AGGGGCCCCTGCAGGATTCCAGGCACCTCCCGTTTG...CGGAGGCATGTCTACTTGTGATCCCGGACAGCCGAACCCAAGAGCTGGTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCCAACCAGAGGTGAGCTaGTTCCCCGGCTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCAQPEVS*FPGSGT
Trigger: GGTCCCAGAGCCGGGGAACCAGCTCACCTCTGGTTG...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGCTCCCTGCCAGCCGGTaGGGACTGCTGGGAACACAT +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQLPASR*GLLGTH
Trigger: ATGTGTTCCCAGCAGTCCCCACCGGCTGGCAGGGAG...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR TCA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGACTCGGTTGGTCAATCTaGAGAGGGCATTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGLGWSI*RGHFLS
Trigger: GGACAGGAAATGCCCTCTTCAGATTGACCAACCGAG...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCTTGCTAGGGGGTGCTaGGGGGTTCCCGTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSLARGC*GVPVVV
Trigger: GACCACAACGGGAACCCCTCAGCACCCCCTAGCAAG...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GGCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCCCGGGAAGGGAGGCTaGAGCTGGAACTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GREHESSFVPVAGPTTEMPGKGG*SWNSSA
Trigger: TGCAGAGGAGTTCCAGCTTCAGCCTCCCTTCCCGGG...CATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAAGGCCCTGGTGTTGCTaGCGTGGCGGGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHERPWCC*RGGRRG
Trigger: GCCCCTTCGCCCGCCACGTCAGCAACACCAGGGCCT...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACGACACACCCGCTGTATaGCGCGGCCAGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDDTPAV*RGQARL
Trigger: GAGCCTGGCCTGGCCGCGTCATACAGCGGGTGTGTC...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACCGCTCGGGGAGCCGGTaGGAGGCTGACACACCCGCT +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDRSGSR*EADTPA
Trigger: AGCGGGTGTGTCAGCCTCTCACCGGCTCCCCGAGCG...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCGGGCTCCCCCTAAGCTaGCAAGGGCGTGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSGLPLS*QGRGLV
Trigger: GACAAGCCCACGCCCTTGTCAGCTTAGGGGGAGCCC...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCCACCATTTTCTCCCCTaGCTGCTGCGTGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCAHHFLP*LLRGGH
Trigger: GTGCCCACCACGCAGCAGTCAGGGGAGAAAATGGTG...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp ACGCCCAGTGGTACTCCGGGGGCAAGACATGGCCATGTGCTCTCCACATTCACCGGTCGCCACACTTCCTaGAGCACGGCAACACCCACA +
Preference number: 4 (lower is better)
Translates to: TPSGTPGARHGHVLSTFTGRHTS*STATPT
Trigger: TGTGGGTGTTGCCGTGCTTCAGGAAGTGTGGCGACC...GGTGAATGTGGAGAGCACATGGCCATGTCTTGCCCCCGGAGTACCACTGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp AGAGCGGTGCCCAGCTCTGCCGGGGACAACAGAGACTGCCCAACATCCCACAGGGTCACTGCCTCCCGGTaGCATAGTGAGCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: RAVPSSAGDNRDCPTSHRVTASR*HSELSF
Trigger: AAAGGACAGCTCACTATGGCACCGGGAGGCAGTGAC...CCTGTGGGATGTTGGGCAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAATAGCGCTGGACGCTaGCCCCGCTGTAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCNSAGR*PRCSSV
Trigger: GACGCTGCTACAGCGGGGGCAGCGTCCAGCGCTATT...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACAAGCTGGAACTCCTCTaGATGGTGCTGAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: FCGPGGCHARGAGERLTHKLELL*MVLKPL
Trigger: CAACGGCTTCAGCACCATGCAGAGGAGTTCCAGCTT...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTGTGGACCTGGTGGCTaGCACGCTCGGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQCGPGG*HARGAG
Trigger: ACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACA...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GGCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCTAGAGCGGCTGGAGTaGAAGCCACAGCCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: GREHESSFVPVAGPTTEMLERLE*KPQPVR
Trigger: CCGCACAGGCTGTGGCTTGCACTCCAGCCGCTCTAG...CATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp AGAGCGGTGCCCAGCTCTGCCGGGGACAACAGAGACTGCCCAACATCCCACAGGGGAAATGGCCAAATGTaGTCAACTCCTGTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: RAVPSSAGDNRDCPTSHRGNGQM*STPVRG
Trigger: GCCGCGCACAGGAGTTGACCACATTTGGCCATTTCC...CCTGTGGGATGTTGGGCAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACGGCCCTTCTGGGAAATaGCCAAATGTGGTCAACTCC +
Preference number: 4 (lower is better)
Translates to: FCGPGGCHARGAGERLTHGPSGK*PNVVNS
Trigger: GGAGTTGACCACATTTGGCCATTTCCCAGAAGGGCC...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGTTAAGGACACACGGCTaGGAGCGGCTGCGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQLRTHG*ERLRER
Trigger: CCTTTCCCGCAGCCGCTCCCAGCCGTGTGTCCTTAA...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTCAGGACAGGTCCTCCTaGCAGGCGAGGTGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFQDRSS*QARWSS
Trigger: CGACGACCACCTCGCCTGCCAGGAGGACCTGTCCTG...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGATCAGGCCCACGAGTTaGGCTCCCCTTCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GREHESSFVPVAGPTTEMIRPTS*APLQGP
Trigger: GGGCCCTTGAAGGGGAGCCCAACTCGTGGGCCTGAT...CATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CATCCCTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAACATGGCTTACCCTCTaGAGGGCCAGTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: HPCRLTSGVTVIPVTTPITWLTL*RASPAP
Trigger: GGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGT...TATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp ACGCCCAGTGGTACTCCGGGGGCAAGACATGGCCATGTGCTCTCCACATTCACCACGGTGGCAGAGCCATaGGGTCAGCCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: TPSGTPGARHGHVLSTFTTVAEP*GQPLHA
Trigger: AGCATGGAGAGGCTGACCCCATGGCTCTGCCACCGT...GGTGAATGTGGAGAGCACATGGCCATGTCTTGCCCCCGGAGTACCACTGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp AGAGCGGTGCCCAGCTCTGCCGGGGACAACAGAGACTGCCCAACATCCCACAGGAAGCTGACAAGGGCGTaGGCTTGTCTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RAVPSSAGDNRDCPTSHRKLTRA*ACLEVG
Trigger: ACCCACCTCAAGACAAGCCCACGCCCTTGTCAGCTT...CCTGTGGGATGTTGGGCAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CGCTTTCTGGTCGCCACACTTCCTGAAGCACGGCAACACCCACAACATCCAGCTGGGCTTGCTGGTCGATaGGACCAGCTTGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RFLVATLPEARQHPQHPAGLAGR*DQLAGR
Trigger: CCTCCCCGCAAGCTGGTCCCATCGACCAGCAAGCCC...AGCTGGATGTTGTGGGTGTTGCCGTGCTTCAGGAAGTGTGGCGACCAGAAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
3UTR CAA 72 bp CGACACCACTCAGGAAGCTTTCATCAGGCCCACGAGTaGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RHHSGSFHQAHE*GSPSRAHLVPR
Trigger: TCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAACTCGTGGGCCTGATGAAAGCTTCCTGAGTGGTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CAA 72 bp ACGGGAGGCCCTAACAAGCACCCTCCAAATCGTTCCTaGGGCCCGAGACTCCGGACATGGCTTACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TGGPNKHPPNRS*GPRLRTWLTLW
Trigger: CCAGAGGGTAAGCCATGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAGGGTGCTTGTTAGGGCCTCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp CTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAGCCACTGTGCAGTTCACGGCTaGAGGTCCCACATGCAATGG +
Preference number: 4 (lower is better)
Translates to: LPADVWSDRHSSDHPHSHCAVHG*RSHMQW
Trigger: CCATTGCATGTGGGACCTTCAGCCGTGAACTGCACA...GTGGCTATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTCCCTGGGCCGGAGGCTaGGAGCAGGGCGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSPWAGG*EQGGPG
Trigger: GCCTGGACCGCCCTGCTCTCAGCCTCCGGCCCAGGG...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGGCGCAGCTGTCTaGCTCCTCACAGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPQGAAV*LLTGQV
Trigger: GACCTGTCCTGTGAGGAGTCAGACAGCTGCGCCCTG...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp CATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCCACTACAAAAGTGCTTTaGACGCGCGTGTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: HGKVWHHCQCGARGCPSPTTKVL*TRVSAN
Trigger: GTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGT...GGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp GACATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCATGTGTCAGCCACCTaGGCTAGCAACACCATCTCT +
Preference number: 4 (lower is better)
Translates to: DMARCGIIASVGPEGARAHVSAT*ASNTIS
Trigger: AGAGATGGTGTTGCTAGCTCAGGTGGCTGACACATG...GGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATCAGGCAGGCGGGGTCTaGGGAGGCTGGGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDQAGGV*GGWVIS
Trigger: AGAAATGACCCAGCCTCCTCAGACCCCGCCTGCCTG...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGGGGTGCAGCAGGCATaGCACCAAGGCAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDGVQQA*HQGRAR
Trigger: GCGGGCTCTGCCTTGGTGTCATGCCTGCTGCACCCC...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTACACCGGAACCAACCATaGTTATCACTCAGTGACCTG +
Preference number: 4 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLHRNQP*LSLSDL
Trigger: CAGGTCACTGAGTGATAAGCATGGTTGGTTCCGGTG...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCCCATGTGGTGGTGTCTaGAAGGCAGCCGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCPCGGV*KAAGEE
Trigger: CTCCTCTCCGGCTGCCTTGCAGACACCACCACATGG...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGCCCGGCTCTGGGACCTaGCCAGTGCCCGGCATACCC +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMPGSGT*PVPGIP
Trigger: GGGTATGCCGGGCACTGGGCAGGTCCCAGAGCCGGG...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTGCTATAGAGGCTGTGTaGCCTCGGCCACACCGGGCA +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPAIEAV*PRPHRA
Trigger: TGCCCGGTGTGGCCGAGGGCACACAGCCTCTATAGC...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGATCCCAGACCCGGAATaGAAGCCATTCCGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVIPDPE*KPFRGP
Trigger: TGGCCCCCGGAATGGCTTGCATTCCGGGTCTGGGAT...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGGAAACAGCTCCCCATTaGCCACTCACCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQETAPH*PLTLGV
Trigger: CACCCCAAGGGTGAGTGGCCAATGGGGAGCTGTTTC...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp TTGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGAGTGGGGGCTGTCGATGCCATGATGTCCGGCAACTaGACATCTCATCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGSPSRAHLVPRVGAVDAMMSGN*TSHRRR
Trigger: CCTTCTCCGATGAGATGTCCAGTTGCCGGACATCAT...GGCATCGACAGCCCCCACTCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACTGCGGGAAAGGCCGCTaGAGCGTCTCGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDCGKGR*SVSPAL
Trigger: CAGAGCTGGCGAGACGCTCCAGCGGCCTTTCCCGCA...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGCGGGCGAAGGGGCTCTaGGGACCGCAGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQRAKGL*GPQSSV
Trigger: GACAGAGGACTGCGGTCCCCAGAGCCCCTTCGCCCG...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGCAGGACAGGTCCTCCTaGCAGGCGAGGTGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQQDRSS*QARWSS
Trigger: CGACGACCACCTCGCCTGCCAGGAGGACCTGTCCTG...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp AGAGCGGTGCCCAGCTCTGCCGGGGACAACAGAGACTGCCCAACATCCCACAGGTTCAAGAGGCTGCCCTaGTATCGTGCCATCCCTACA +
Preference number: 4 (lower is better)
Translates to: RAVPSSAGDNRDCPTSHRFKRLP*YRAIPT
Trigger: TGTAGGGATGGCACGATACCAGGGCAGCCTCTTGAA...CCTGTGGGATGTTGGGCAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGGGCCCCTGCAGAGTaGCCAGCGGACGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMGAPAE*PADALH
Trigger: GTGAAGGGCGTCCGCTGGCCACTCTGCAGGGGCCCC...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGGTGGGTGATGTGCCCTaGTTACAGCCAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQVGDVP*LQPAVL
Trigger: GAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGATGGGGACACCAATGTaGGGGGCACCTCCTAGGCGA +
Preference number: 4 (lower is better)
Translates to: GREHESSFVPVAGPTTEMMGTPM*GAPPRR
Trigger: TCGCCTAGGAGGTGCCCCCCACATTGGTGTCCCCAT...CATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCCAGCTCCCCGGGTGCTaGGGCTTTCACTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSQLPGC*GFHLGP
Trigger: TGGTCCTAAGTGAAAGCCTCAGCACCCGGGGAGCTG...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCATCGGAGAAGGACAGTaGGCGGCACTGGCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSIGEGQ*AALALA
Trigger: AGCAAGCGCCAGTGCCGCTCACTGTCCTTCTCCGAT...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTGCCCAAGGGCCTCCATaGTGTCCGGCAACTGGACAT +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPAQGPP*CPATGH
Trigger: ATGTCCAGTTGCCGGACATCATGGAGGCCCTTGGGC...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATGCCCAAGGGCCTCCATaGTGTCCGGCAACTGGACAT +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDAQGPP*CPATGH
Trigger: ATGTCCAGTTGCCGGACATCATGGAGGCCCTTGGGC...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGGGAAAACTGCTCATGTaGGCAAGAGAGGGACCGCTG +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQGKLLM*AREGPL
Trigger: CAGCGGTCCCTCTCTTGCTCACATGAGCAGTTTTCC...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGACACACCCGCTGTATaGCGCGGCCAGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMDTPAV*RGQARL
Trigger: GAGCCTGGCCTGGCCGCGTCATACAGCGGGTGTGTC...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGGAGCCGGTGAGAGGCTaGCACACCCGCTGTATGACG +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQEPVRG*HTRCMT
Trigger: CGTCATACAGCGGGTGTGTCAGCCTCTCACCGGCTC...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGACGCCCTTCACCCCTaGGTGCGCATAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDDALHP*VRIGPS
Trigger: TGAGGGCCCTATGCGCACTCAGGGGTGAAGGGCGTC...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCTTGGTGGCTTTGGAATaGGTGGGGTGCATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCALVALE*VGCMWH
Trigger: GTGCCACATGCACCCCACTCATTCCAAAGCCACCAA...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp CATCCCTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATACATGACAGAGGGGTTTaGCCAACAGCGTGGACATGG +
Preference number: 4 (lower is better)
Translates to: HPCRLTSGVTVIPVTTPIHDRGV*PTAWTW
Trigger: CCATGTCCACGCTGTTGGTCAAACCCCTCTGTCATG...TATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTAATTCCCAGATGCTGGTaGTCGGTTGGTCAATCTGAA +
Preference number: 4 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLIPRCW*SVGQSE
Trigger: TTCAGATTGACCAACCGAGCACCAGCATCTGGGAAT...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACATTCCCAGATGCTGGTaGTCGGTTGGTCAATCTGAA +
Preference number: 4 (lower is better)
Translates to: FCGPGGCHARGAGERLTHIPRCW*SVGQSE
Trigger: TTCAGATTGACCAACCGAGCACCAGCATCTGGGAAT...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGCCTCCTCCCACGGGGTaGAGGTCAGGGCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMPPPTG*RSGLQV
Trigger: CACCTGGAGCCCTGACCTGCACCCCGTGGGAGGAGG...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCGTGTTGAGGCAGGTGTaGTGTTGGCTGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSVLRQV*CWLRED
Trigger: GTCCTCCCTCAGCCAACAGCACACCTGCCTCAACAC...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTGAAGGCCTCTGCTCTTaGACTTCTTCAGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPEGLCS*TSSGRR
Trigger: GCGGCGCCCTGAAGAAGTGCAAGAGCAGAGGCCTTC...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGGCAGTCCTCTGTCCCTaGGCTCAGGCAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQAVLCP*AQAAEA
Trigger: AGCCTCAGCTGCCTGAGCGCAGGGACAGAGGACTGC...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTGCCACAGAGAAGGGCTaGCATCTGCTAACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPATEKG*HLLTLP
Trigger: GGGCAGGGTTAGCAGATGGCAGCCCTTCTCTGTGGC...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTACCTCATCTGCCCACCTaGTCGCAGCTCCCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVPHLPT*SQLPSP
Trigger: GGGAGACGGGAGCTGCGAGCAGGTGGGCAGATGAGG...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp CTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTCCTCATCTGCCCACCTaGTCGCAGCTCCCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LQKCFERACQPTQGSAPVPHLPT*SQLPSP
Trigger: GGGAGACGGGAGCTGCGAGCAGGTGGGCAGATGAGG...AACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CATCCCTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATATTGAGGTGGGTGATGTaGCCTGGTTACAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HPCRLTSGVTVIPVTTPILRWVM*PGYSQQ
Trigger: CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAA...TATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp AGAGCGGTGCCCAGCTCTGCCGGGGACAACAGAGACTGCCCAACATCCCACAGGCAAGACATGGCCATGTaGTCTCCACATTCACCCAAC +
Preference number: 4 (lower is better)
Translates to: RAVPSSAGDNRDCPTSHRQDMAM*SPHSPN
Trigger: GTTGGGTGAATGTGGAGAGCACATGGCCATGTCTTG...CCTGTGGGATGTTGGGCAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGAGTGCAGGAACAGGCTaGTCCGGGCAGTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQSAGTG*SGQCGS
Trigger: GCTGCCACACTGCCCGGAGCAGCCTGTTCCTGCACT...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATAAGGAGGAATCTCCCTaGCAGCCGGTGGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDKEESP*QPVGTA
Trigger: AGCAGTCCCCACCGGCTGGCAGGGAGATTCCTCCTT...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCTCACTTGGGCAGACTTaGGGTGAGTACCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSSLGQT*GEYLLG
Trigger: CCCCAGGAGGTACTCACCCCAAGTCTGCCCAAGTGA...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACTTGACTCATCTTCTTTaGCGTGTGCAGTTCACGGCT +
Preference number: 4 (lower is better)
Translates to: FCGPGGCHARGAGERLTHLTHLL*RVQFTA
Trigger: AGCCGTGAACTGCACACGCCAAAGAAGATGAGTCAA...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATTTAAGGACACACGGCTaGGAGCGGCTGCGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDLRTHG*ERLRER
Trigger: CCTTTCCCGCAGCCGCTCCCAGCCGTGTGTCCTTAA...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCACGGTGGCAGAGCCATaGGGTCAGCCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSTVAEP*GQPLHA
Trigger: AGCATGGAGAGGCTGACCCCATGGCTCTGCCACCGT...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGGGGCTTGTCTTGAGGTaGGTGATGTGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQGLVLR*VMCPGY
Trigger: GTAACCAGGGCACATCACCCACCTCAAGACAAGCCC...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGAGAGCAGAGCCCATGTaGTGGTGTCTGCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GREHESSFVPVAGPTTEMRAEPM*WCLQGS
Trigger: GCTGCCTTGCAGACACCACCACATGGGCTCTGCTCT...CATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATGGCACGGCTTGCTTCTaGCTCTGCCCTTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDGTACF*LCPSSV
Trigger: GACTGAGGAAGGGCAGAGCCAGAAGCAAGCCGTGCC...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACGCATCATTGCCAGTGTaGGGCCAGAGGGTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDASLPV*GQRVPE
Trigger: CTCGGGCACCCTCTGGCCCCACACTGGCAATGATGC...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTGAACAACCGTCAGCCTaGCTCCATCTGCACCCGCTC +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFEQPSA*LHLHPL
Trigger: GAGCGGGTGCAGATGGAGCCAGGCTGACGGTTGTTC...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR TCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCTCCTCTGCATGGTGCTaGAGCCGTTGGAATAGCGCT +
Preference number: 4 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSSSAWC*SRWNSA
Trigger: AGCGCTATTCCAACGGCTTCAGCACCATGCAGAGGA...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTACAGCAACCAGAGGTaGGCTGGTTCCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQYSNQR*AGSPAL
Trigger: CAGAGCCGGGGAACCAGCTCACCTCTGGTTGCTGTA...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTACGCTTTAGGACCCCATaGGCAGGCAGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVRFRTP*AGRWPG
Trigger: GCCAGGCCATCTGCCTGCTCATGGGGTCCTAAAGCG...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAACCCCTTGGCAGGGCTaGCCTCCAAATCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHETPWQG*PPNRWW
Trigger: CCACCACCGATTTGGAGGGCAGCCCTGCCAAGGGGT...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACGCTGCCCTGGTATCGTaGCATCCCTACACTCACCGG +
Preference number: 4 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDAALVS*HPYTHR
Trigger: CCGGTGAGTGTAGGGATGGCACGATACCAGGGCAGC...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACCATAGGGCCCTCATCTaGCCACCTGCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDHRALI*PPARSS
Trigger: GGAGCTGCGAGCAGGTGGGCAGATGAGGGCCCTATG...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAAGGTGCCTGGAATCCTaGAGGGGCCCCTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHERCLES*RGPCRV
Trigger: CACTCTGCAGGGGCCCCTGCAGGATTCCAGGCACCT...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGCATTCACCCAACAACTaGCCTGGCCGCCTCCACATT +
Preference number: 4 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVHSPNN*PGRLHI
Trigger: AATGTGGAGGCGGCCAGGGCAGTTGTTGGGTGAATG...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTGAGCTGTCTGCCTGCTaGCCATGGGGACACCAATGT +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFELSAC*PWGHQC
Trigger: ACATTGGTGTCCCCATGGGCAGCAGGCAGACAGCTC...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCGGGGTGGGGCCCTTCTaGGAAATGGCCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSGVGPF*EMAKCG
Trigger: ACCACATTTGGCCATTTCCCAGAAGGGCCCCACCCC...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGCACTCACCCTTGGGGTaGGGCCCTTCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQHSPLG*GPSGKW
Trigger: CCATTTCCCAGAAGGGCCCCACCCCAAGGGTGAGTG...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTGAGGGGTTCCCGTTGTaGTCGCTGATGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPEGFPL*SLMLRS
Trigger: AGACCTCAGCATCAGCGACCACAACGGGAACCCCTC...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACCCTCCAAATCGGTGGTaGAGTCCTGCCTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDPPNRW*SPAWSQ
Trigger: CTGCGACCAGGCAGGACTCCACCACCGATTTGGAGG...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp AGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAACACGGGAGGCCGGTGGGCTCCCTCTCTaGGACCCGACACCACTCAGG +
Preference number: 4 (lower is better)
Translates to: SPSFQPTDPPNFYPTREAGGLPL*DPTPLR
Trigger: CCTGAGTGGTGTCGGGTCCCAGAGAGGGAGCCCACC...GGCCTCCCGTGTTGGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACCCGAGACTCCGGACATaGCTTACCCTCTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDPRLRT*LTLWRA
Trigger: GGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTGGGGCCCCTGCAGAGTaGCCAGCGGACGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSGAPAE*PADALH
Trigger: GTGAAGGGCGTCCGCTGGCCACTCTGCAGGGGCCCC...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTAGAGCAGAGCCCATGTaGTGGTGTCTGCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPRAEPM*WCLQGS
Trigger: GCTGCCTTGCAGACACCACCACATGGGCTCTGCTCT...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACAGCAGGCAGATGGCCTaGCACGGCTTGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDSRQMA*HGLLLA
Trigger: AGCCAGAAGCAAGCCGTGCCAGGCCATCTGCCTGCT...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTAATCGGAGAAGGACAGTaGGCGGCACTGGCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVIGEGQ*AALALA
Trigger: AGCAAGCGCCAGTGCCGCTCACTGTCCTTCTCCGAT...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp GCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGAAAACTGTCCACACGGGGCTaGGCCTGGCACCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: ACQPTQGSAPVIFSLMGKLSTRG*AWHPLA
Trigger: TGCCAAGGGGTGCCAGGCTCAGCCCCGTGTGGACAG...TTTTCCCATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGCCAAGAAGGGCCCTaGCATAGCAGATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMGQEGP*HSRWPL
Trigger: CAGGGGCCATCTGCTATGTCAGGGCCCTTCTTGGCC...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCCGGAGTAAAACTGAGTaGAAGAAGCTGCGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSRSKTE*KKLRGR
Trigger: TCGGCCCCGCAGCTTCTTTCACTCAGTTTTACTCCG...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp CTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAGCCACCTCTTTAAAGAGGCATaGCAGAGGGGTTTGACCAAC +
Preference number: 4 (lower is better)
Translates to: LPADVWSDRHSSDHPHSHLFKEA*QRGLTN
Trigger: GTTGGTCAAACCCCTCTGTCATGCCTCTTTAAAGAG...GTGGCTATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTAACTCCCTGGTCGGCTaGCTCCATTCCTTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPNSLVG*LHSFPS
Trigger: ACTTGGGAAGGAATGGAGTCAGCCGACCAGGGAGTT...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR GCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACCGGCTCCGCTCTCCTaGCACAATCCTCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPPAPLS*HNPRPG
Trigger: CCCTGGACGAGGATTGTGGCAGGAGAGCGGAGCCGG...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATAGCTGTCCTCTGGGCTaGAGTAGTTCTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDSCPLG*SSSVDL
Trigger: CAGGTCCACAGAACTACTGCAGCCCAGAGGACAGCT...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGCTGAGTGAAAGAAGCTaGGGGGCCGACTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQLSERS*GADSPE
Trigger: TTCTGGGGAGTCGGCCCCGCAGCTTCTTTCACTCAG...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGCTGCCCTGGTATCGTaGCATCCCTACACTCACCGG +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEAALVS*HPYTHR
Trigger: CCGGTGAGTGTAGGGATGGCACGATACCAGGGCAGC...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCCCGTTTTCAAGAGGCTaGCCTGGTATCGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSPFSRG*PGIVPS
Trigger: GGATGGCACGATACCAGGGCAGCCTCTTGAAAACGG...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CAGAGGGGTTTGACCAACAGCGTGGACATGGCAAGGTGTGGCATCATTGCCAGTGGCCTACAACAGAGATaGAGCCCTCAGGACTGGGCT +
Preference number: 4 (lower is better)
Translates to: QRGLTNSVDMARCGIIASGLQQR*SPQDWA
Trigger: AGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCC...ACTGGCAATGATGCCACACCTTGCCATGTCCACGCTGTTGGTCAAACCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACCCATGTGGTGGTGTCTaGAAGGCAGCCGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDPCGGV*KAAGEE
Trigger: CTCCTCTCCGGCTGCCTTGCAGACACCACCACATGG...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp AGAGCGGTGCCCAGCTCTGCCGGGGACAACAGAGACTGCCCAACATCCCACAGGCTAAGCCAGCCCAATTaGTATTGTTTGCAGAAGACG +
Preference number: 4 (lower is better)
Translates to: RAVPSSAGDNRDCPTSHRLSQPN*YCLQKT
Trigger: CGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAG...CCTGTGGGATGTTGGGCAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTAGGTGAGCTGTCTGCCTaGTGCCCATGGGGACACCAA +
Preference number: 4 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVGELSA*CPWGHQ
Trigger: TTGGTGTCCCCATGGGCAGCAGGCAGACAGCTCACC...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCAGTGCACGTCTGCCCGTaGAAATCCGGCCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPVHVCP*KSGLHR
Trigger: GCGGTGGAGGCCGGATTTGCACGGGCAGACGTGCAC...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTACAGCTAGGGAAGCTTaGTCAGACAGGCAGCACACC +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFTAREA*SDRQHT
Trigger: GGTGTGCTGCCTGTCTGAGCAAGCTTCCCTAGCTGT...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACAAGGTGTGGCATCATTaGCAGTGTGGGGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDKVWHH*QCGARG
Trigger: CCCTCTGGCCCCACACTGGCAATGATGCCACACCTT...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGGCAGCACAAGACGCTTaGCTGGCTTCCCAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQAAQDA*LASQAN
Trigger: ATTGGCCTGGGAAGCCAGGCAAGCGTCTTGTGCTGC...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTCACTTGGGCAGACTTaGGGTGAGTACCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQSLGQT*GEYLLG
Trigger: CCCCAGGAGGTACTCACCCCAAGTCTGCCCAAGTGA...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGAGGTCCCACATGCAATaGAGTCAGCTCCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQRSHMQ*SQLPGC
Trigger: GCACCCGGGGAGCTGACTCCATTGCATGTGGGACCT...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAACGGGAGTCCAGACTTTaGAGCCCAAGGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHERESRL*SPRASM
Trigger: CATGGAGGCCCTTGGGCTCCAAAGTCTGGACTCCCG...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGCCTCCAAATCGGTGGTaGAGTCCTGCCTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQPPNRW*SPAWSQ
Trigger: CTGCGACCAGGCAGGACTCCACCACCGATTTGGAGG...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp AGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAACACGGGAGGCCGAGCCTGGCACCCCTTaGCAGGGCTGCCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SPSFQPTDPPNFYPTREAEPGTP*QGCPPN
Trigger: ATTTGGAGGGCAGCCCTGCCAAGGGGTGCCAGGCTC...GGCCTCCCGTGTTGGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCAGGCAGGTGTGCTGTTaGCTGAGGGAGGACAGTATT +
Preference number: 4 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSRQVCC*LREDSI
Trigger: AATACTGTCCTCCCTCAGCCAACAGCACACCTGCCT...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGATCAGGCCCACGAGTTaGGCTCCCCTTCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMIRPTS*APLQGP
Trigger: GGGCCCTTGAAGGGGAGCCCAACTCGTGGGCCTGAT...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCGGTGGGCTCCCTCTCTaGGACCCGACACCACTCAGG +
Preference number: 4 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFGGLPL*DPTPLR
Trigger: CCTGAGTGGTGTCGGGTCCCAGAGAGGGAGCCCACC...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCCGGAATTAAGGCCAAATaGTTCTGGTGTTACAGAAGG +
Preference number: 4 (lower is better)
Translates to: HGKVWHHCQCGARGCPSPGIKAK*FWCYRR
Trigger: CCTTCTGTAACACCAGAACCATTTGGCCTTAATTCC...GGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp AGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAACACGGGAGGCCCAAACGGGAGGTGCCTaGAATCCTGCAGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SPSFQPTDPPNFYPTREAQTGGA*NPAGAP
Trigger: AGGGGCCCCTGCAGGATTCCAGGCACCTCCCGTTTG...GGCCTCCCGTGTTGGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTCTTTGTGCCGGTGGCTaGGCCTACAACAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFLCAGG*AYNRDA
Trigger: TGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAG...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACACCCAACAACTGCCCTaGCCGCCTCCACATTTGCTC +
Preference number: 4 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDTQQLP*PPPHLL
Trigger: GAGCAAATGTGGAGGCGGCCAGGGCAGTTGTTGGGT...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CGCTTTCTGGTCGCCACACTTCCTGAAGCACGGCAACACCCACAACATCCAGCTTCCGGGGGCAAGACATaGCCATGTGCTCTCCACATT +
Preference number: 4 (lower is better)
Translates to: RFLVATLPEARQHPQHPASGGKT*PCALHI
Trigger: AATGTGGAGAGCACATGGCCATGTCTTGCCCCCGGA...AGCTGGATGTTGTGGGTGTTGCCGTGCTTCAGGAAGTGTGGCGACCAGAAAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CATCCCTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATAGCAGTTTGGTGGCTTTaGAATGAGTGGGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: HPCRLTSGVTVIPVTTPIAVWWL*NEWGAC
Trigger: ACATGCACCCCACTCATTCCAAAGCCACCAAACTGC...TATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTGTATGGCAACGAAAATaGCAAGGCTGTGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFVWQRK*QGCGPS
Trigger: GCTGGGGCCACAGCCTTGCCATTTTCGTTGCCATAC...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGAACGAGTCCAGGATCTaGAGCAAGGAGGAATCTCCC +
Preference number: 4 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVNESRI*SKEESP
Trigger: GGGAGATTCCTCCTTGCTCCAGATCCTGGACTCGTT...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR TCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCCCCGGGAAGGGAGGCTaGAGCTGGAACTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFPGKGG*SWNSSA
Trigger: TGCAGAGGAGTTCCAGCTTCAGCCTCCCTTCCCGGG...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp AGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAACACGGGAGGCCGAACCTTCCCAAGCCTaGAGCAGGGAGACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SPSFQPTDPPNFYPTREAEPSQA*SRETWE
Trigger: CTCCCAGGTCTCCCTGCTTCAGGCTTGGGAAGGTTC...GGCCTCCCGTGTTGGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCAGGAGCTACAAACCTTaGGAGGAGAGCAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSRSYKP*EESKPS
Trigger: TGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTCCT...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTGTGGGGAGGTGGCTGTaGCTCAGCCAGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSVGRWL*LSQLHS
Trigger: GCTGTGGAGCTGGCTGAGTCACAGCCACCTCCCCAC...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTAAGCTGGAACTCCTCTaGATGGTGCTGAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFKLELL*MVLKPL
Trigger: CAACGGCTTCAGCACCATGCAGAGGAGTTCCAGCTT...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTCCTCCTCCCACGGGGTaGAGGTCAGGGCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLPPPTG*RSGLQV
Trigger: CACCTGGAGCCCTGACCTGCACCCCGTGGGAGGAGG...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTAGTGGGGGCTGTCGATaGCAGCACACCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSSGGCR*QHTPAL
Trigger: CAGGGCTGGGGTGTGCTGGCATCGACAGCCCCCACT...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCCATAGGGCCCTCATCTaGCCACCTGCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFHRALI*PPARSS
Trigger: GGAGCTGCGAGCAGGTGGGCAGATGAGGGCCCTATG...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCAGGTGCCTGGAATCCTaGAGGGGCCCCTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFRCLES*RGPCRV
Trigger: CACTCTGCAGGGGCCCCTGCAGGATTCCAGGCACCT...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGGCCTACAACAGAGATaGAGCCCTCAGGACTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDGLQQR*SPQDWA
Trigger: AGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCC...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATATGAATCCAGCTTTGTaGCGGTGGCTGGGCCTACAA +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDMNPAL*RWLGLQ
Trigger: TTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCAT...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CGCTTTCTGGTCGCCACACTTCCTGAAGCACGGCAACACCCACAACATCCAGCTCATCTGGACTCAACCTaGAGAAGCGAGGCGTTCACT +
Preference number: 4 (lower is better)
Translates to: RFLVATLPEARQHPQHPAHLDST*RSEAFT
Trigger: AGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATG...AGCTGGATGTTGTGGGTGTTGCCGTGCTTCAGGAAGTGTGGCGACCAGAAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGGGGCTGGGGGCTTTCTaGCAGCTCCTTAAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQGLGAF*QLLKAD
Trigger: ATCAGCTTTAAGGAGCTGGCAGAAAGCCCCCAGCCC...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGAAAAGCCAGCAGGGTGGAGTaGAGGAACAGGCTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ACQPTQGSAPVIFSLMGKASRVE*RNRLLR
Trigger: CCGGAGCAGCCTGTTCCTGCACTCCACCCTGCTGGC...TTTTCCCATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCATGGCCTGGCACGGCTTaGTTCTGGCTCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPWPGTA*FWLCPS
Trigger: GGAAGGGCAGAGCCAGAAGCAAGCCGTGCCAGGCCA...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGAAAAGCCCAGGTGCACGTCTaGCCGTGCAAATCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ACQPTQGSAPVIFSLMGKAQVHV*PCKSGL
Trigger: GAGGCCGGATTTGCACGGGCAGACGTGCACCTGGGC...TTTTCCCATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACCAGTGGAAACGGGGGTaGAGCAGGCATGACACCAAG +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDQWKRG*SRHDTK
Trigger: CTTGGTGTCATGCCTGCTGCACCCCCGTTTCCACTG...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTGGGGTGAGTACCTCCTaGGGAATTGATGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFGVSTS*GIDVSR
Trigger: TCTGCTGACATCAATTCCCCAGGAGGTACTCACCCC...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCGGGGTGAGTACCTCCTaGGGAATTGATGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSGVSTS*GIDVSR
Trigger: TCTGCTGACATCAATTCCCCAGGAGGTACTCACCCC...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACGGCTCCATCCCAGGGTaGGTATCAGCCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDGSIPG*VSAIFT
Trigger: AGTGAAGATGGCTGATACCCACCCTGGGATGGAGCC...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGTGCCCTCCAAATCGGTaGTGGAGTCCTGCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMCPPNR*WSPAWS
Trigger: CGACCAGGCAGGACTCCACCACCGATTTGGAGGGCA...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCAGGCAGGTGTGCTGTTaGCTGAGGGAGGACAGTATT +
Preference number: 4 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSRQVCC*LREDSI
Trigger: AATACTGTCCTCCCTCAGCCAACAGCACACCTGCCT...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGGGGCTTGTCTTGAGGTaGGTGATGTGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQGLVLR*VMCPGY
Trigger: GTAACCAGGGCACATCACCCACCTCAAGACAAGCCC...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCGCAGAGCCCATGTGGTaGTGTCTGCAAGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFAEPMW*CLQGSR
Trigger: CCGGCTGCCTTGCAGACACCACCACATGGGCTCTGC...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCAGCAGAGCCCATGTGGTaGTGTCTGCAAGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPAEPMW*CLQGSR
Trigger: CCGGCTGCCTTGCAGACACCACCACATGGGCTCTGC...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGAAGGTGAGAAGCATCTaGACTCAACCTGCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: GREHESSFVPVAGPTTEMKVRSI*TQPAEA
Trigger: CGCTTCTGCAGGTTGAGTCCAGATGCTTCTCACCTT...CATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCTGGGGCTGGGCTTGCTaGTCGATGGGACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GEASKSVFSANRSTKFLPWGWAC*SMGPAC
Trigger: GCAAGCTGGTCCCATCGACCAGCAAGCCCAGCCCCA...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGGAAAATCTGTACGTCTaGTCAGAACAAGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQENLYV*SEQAPH
Trigger: GTGGGGAGCTTGTTCTGACCAGACGTACAGATTTTC...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTGGAAATGGCCAAATGTaGTCAACTCCCTGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPGNGQM*STPWSA
Trigger: AGCCGACCAGGGAGTTGACCACATTTGGCCATTTCC...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR TCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTTACCTCCTGGGGAATTaGTGTCAGCAGAAACAGCTC +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPYLLGN*CQQKQL
Trigger: GAGCTGTTTCTGCTGACATCAATTCCCCAGGAGGTA...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGAGGTGTGCTGTTGGCTaGGGGAGGACAGTATTCCAC +
Preference number: 4 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQRCAVG*GRTVFH
Trigger: GTGGAATACTGTCCTCCCTCAGCCAACAGCACACCT...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCATGCTTATCACTCAGTaGCCTGTCAGCCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCMLITQ*PVSHRE
Trigger: TTCTCTGTGGCTGACAGGTCACTGAGTGATAAGCAT...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTACTACAAAAGTGCTTTaGACGCGCGTGTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFTTKVL*TRVSAN
Trigger: GTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGT...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGTCACTGCCTCCCGGTaGCATAGTGAGCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEVTASR*HSELSF
Trigger: AAAGGACAGCTCACTATGGCACCGGGAGGCAGTGAC...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCGAAGGCCTCTGCTCTTaGACTTCTTCAGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GEASKSVFSANRSTKFLPEGLCS*TSSGRR
Trigger: GCGGCGCCCTGAAGAAGTGCAAGAGCAGAGGCCTTC...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGCAGTTCTTCTCTATCTaGTCAATGTCCAACTCGCCG +
Preference number: 4 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVQFFSI*SMSNSP
Trigger: CGGCGAGTTGGACATTGAGCAGATAGAGAAGAACTG...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTAGCGGTGCCCAGCTCTaGCGGGGACAACAGAGACTG +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSSGAQL*RGQQRL
Trigger: CAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCT...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATCACCGGAACCAACCATaGTTATCACTCAGTGACCTG +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDHRNQP*LSLSDL
Trigger: CAGGTCACTGAGTGATAAGCATGGTTGGTTCCGGTG...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACCCGTTTTCAAGAGGCTaGCCTGGTATCGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDPFSRG*PGIVPS
Trigger: GGATGGCACGATACCAGGGCAGCCTCTTGAAAACGG...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCAGGACAAACGGGAGGTaGCTGGAATCCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFRTNGR*LESCRG
Trigger: GCCCCTGCAGGATTCCAGGCACCTCCCGTTTGTCCT...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGTTGAGGTGGGTGATGTaGCCTGGTTACAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQLRWVM*PGYSQQ
Trigger: CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAA...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CGCTTTCTGGTCGCCACACTTCCTGAAGCACGGCAACACCCACAACATCCAGCTCAAGATGTCTCTGTCTaGTCAGAGCCACCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RFLVATLPEARQHPQHPAQDVSV*SEPPAL
Trigger: AAGAGCTGGTGGCTCTGAGCAGACAGAGACATCTTG...AGCTGGATGTTGTGGGTGTTGCCGTGCTTCAGGAAGTGTGGCGACCAGAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTAATTTTCTCCCCTGACTaGTGCGTGGTGGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVIFSPD*CVVGTG
Trigger: TCCTGTGCCCACCACGCAGCAGTCAGGGGAGAAAAT...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAGGCGACGGCACAAATaGCCACCCCAGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: GEASKSVFSANRSTKFLPRRRHK*PPQDPR
Trigger: TCTGGGATCCTGGGGTGGGCATTTGTGCCGTCGCCT...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTTTGGCCACTCACCCTTaGGGTGGGGCCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSLATHP*GGALLG
Trigger: TCCCAGAAGGGCCCCACCCCAAGGGTGAGTGGCCAA...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGGCTCCATCCCAGGGTaGGTATCAGCCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEGSIPG*VSAIFT
Trigger: AGTGAAGATGGCTGATACCCACCCTGGGATGGAGCC...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGGGCATTCCCAGATGCTaGTGCTCGGTTGGTCAATCT +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQGIPRC*CSVGQS
Trigger: AGATTGACCAACCGAGCACCAGCATCTGGGAATGCC...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTGACAGTGAGCGGCACTaGCGCTTGCTAGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSDSERH*RLLGGA
Trigger: AGCACCCCCTAGCAAGCGCCAGTGCCGCTCACTGTC...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTCTCCAAATCGTTCCTTaGGCCCGAGACTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: LQKCFERACQPTQGSAPVLQIVP*ARDSGH
Trigger: ATGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAG...AACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTACCCTGCCCCAACGGTaGCAGAGCCATGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLTLPQR*QSHGVS
Trigger: GCTGACCCCATGGCTCTGCCACCGTTGGGGCAGGGT...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGCTGCCGGCTGACGTCTaGAGTGACCGTCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMLPADV*SDRHSS
Trigger: ACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAG...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp AGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAACACGGGAGGCCTGTGCAGTTCACGGCTaGAGGTCCCACATGCAATGG +
Preference number: 4 (lower is better)
Translates to: SPSFQPTDPPNFYPTREACAVHG*RSHMQW
Trigger: CCATTGCATGTGGGACCTTCAGCCGTGAACTGCACA...GGCCTCCCGTGTTGGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp AGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAACACGGGAGGCCTCCTCTGCATGGTGCTaGAGCCGTTGGAATAGCGCT +
Preference number: 4 (lower is better)
Translates to: SPSFQPTDPPNFYPTREASSAWC*SRWNSA
Trigger: AGCGCTATTCCAACGGCTTCAGCACCATGCAGAGGA...GGCCTCCCGTGTTGGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGAGGAGCTACAAACCTTaGGAGGAGAGCAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: DYKSALNARVSQHKGAHQRSYKP*EESKPS
Trigger: TGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTCCT...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTCAGTTCTTCTCTATCTaGTCAATGTCCAACTCGCCG +
Preference number: 4 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFQFFSI*SMSNSP
Trigger: CGGCGAGTTGGACATTGAGCAGATAGAGAAGAACTG...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACTGAGTGAAAGAAGCTaGGGGGCCGACTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPLSERS*GADSPE
Trigger: TTCTGGGGAGTCGGCCCCGCAGCTTCTTTCACTCAG...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAACATCTGGACTCAACCTaGAGAAGCGAGGCGTTCACT +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEHLDST*RSEAFT
Trigger: AGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATG...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGGCCCTTCTGGGAAATaGCCAAATGTGGTCAACTCC +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEGPSGK*PNVVNS
Trigger: GGAGTTGACCACATTTGGCCATTTCCCAGAAGGGCC...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCGAAACAGCTCCCCATTaGCCACTCACCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFETAPH*PLTLGV
Trigger: CACCCCAAGGGTGAGTGGCCAATGGGGAGCTGTTTC...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTGACAGTGAGCGGCACTaGCGCTTGCTAGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLDSERH*RLLGGA
Trigger: AGCACCCCCTAGCAAGCGCCAGTGCCGCTCACTGTC...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTGAGCCTGGCACCCCTTaGCAGGGCTGCCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLEPGTP*QGCPPN
Trigger: ATTTGGAGGGCAGCCCTGCCAAGGGGTGCCAGGCTC...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTACATGGCTTACCCTCTaGAGGGCCAGTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSTWLTL*RASPAP
Trigger: GGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGT...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACGCTTGGATGATGGGGTaGCACCTTATAGATAGGGTC +
Preference number: 4 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDAWMMG*HLIDRV
Trigger: GACCCTATCTATAAGGTGCCACCCCATCATCCAAGC...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CAGAGGGGTTTGACCAACAGCGTGGACATGGCAAGGTGTGGCATCATTGCCAGTTGGCTTTGGAATGAGTaGGGTGCATGTGGCACTAAG +
Preference number: 4 (lower is better)
Translates to: QRGLTNSVDMARCGIIASWLWNE*GACGTK
Trigger: CTTAGTGCCACATGCACCCCACTCATTCCAAAGCCA...ACTGGCAATGATGCCACACCTTGCCATGTCCACGCTGTTGGTCAAACCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGACCAGGAGACCCATTTaGAAGTTAGTTAGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQTRRPI*KLVRVC
Trigger: ACAAACCCTAACTAACTTCCAAATGGGTCTCCTGGT...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGGAAGACTCGGAGTGTaGCCTATAGGAGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEGRLGV*PIGGRI
Trigger: GATTCTGCCTCCTATAGGCCACACTCCGAGTCTTCC...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGGAGATTGTACCGTATaGAAGACTCGGAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEGDCTV*KTRSVA
Trigger: GGCCACACTCCGAGTCTTCCATACGGTACAATCTCC...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACATGTGGTCAACTCCCTaGTCGGCTGACTCCATTCCT +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDMWSTP*SADSIP
Trigger: AGGAATGGAGTCAGCCGACCAGGGAGTTGACCACAT...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR TCA 90 bp CGCTTTCTGGTCGCCACACTTCCTGAAGCACGGCAACACCCACAACATCCAGCTAAAAGTGTAGGTCCTTaGCTCATCTTCTTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: RFLVATLPEARQHPQHPAKSVGP*LIFFGV
Trigger: CACGCCAAAGAAGATGAGTCAAGGACCTACACTTTT...AGCTGGATGTTGTGGGTGTTGCCGTGCTTCAGGAAGTGTGGCGACCAGAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp AGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAACACGGGAGGCCCTCGGTTGGTCAATCTaGAGAGGGCATTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SPSFQPTDPPNFYPTREALGWSI*RGHFLS
Trigger: GGACAGGAAATGCCCTCTTCAGATTGACCAACCGAG...GGCCTCCCGTGTTGGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACGGAGTAAAACTGAGTaGAAGAAGCTGCGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPRSKTE*KKLRGR
Trigger: TCGGCCCCGCAGCTTCTTTCACTCAGTTTTACTCCG...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCCACATATTGGGAACTTaGACCACCATCCTTTTGATG +
Preference number: 4 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCHILGT*TTILLM
Trigger: CATCAAAAGGATGGTGGTTCAAGTTCCCAATATGTG...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp TTCCTCAGTCTCCCCTCAGAGGCAGGGTTTGTGGGCAAGGCTGTGACAAAAGTATCTAGAGAAGGCCTCTaGTCTTGCACTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FLSLPSEAGFVGKAVTKVSREGL*SCTSSG
Trigger: CCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGA...TACTTTTGTCACAGCCTTGCCCACAAACCCTGCCTCTGAGGGGAGACTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp CTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTTCTAGAGAAGGCCTCTaGTCTTGCACTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LQKCFERACQPTQGSAPVSREGL*SCTSSG
Trigger: CCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGA...AACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGATGAATCCAGCTTTGTaGCGGTGGCTGGGCCTACAA +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMMNPAL*RWLGLQ
Trigger: TTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCAT...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CATCCCTGCCGGCTGACGTCTGGAGTGACCGTCATTCCAGTGACCACCCCCATACTGATTTTTAAGAAGTaGCACCCACATATTGGGAAC +
Preference number: 4 (lower is better)
Translates to: HPCRLTSGVTVIPVTTPILIFKK*HPHIGN
Trigger: GTTCCCAATATGTGGGTGGCACTTCTTAAAAATCAG...TATGGGGGTGGTCACTGGAATGACGGTCACTCCAGACGTCAGCCGGCAGGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CAGAGGGGTTTGACCAACAGCGTGGACATGGCAAGGTGTGGCATCATTGCCAGTTTGACTCATCTTCTTTaGCGTGTGCAGTTCACGGCT +
Preference number: 4 (lower is better)
Translates to: QRGLTNSVDMARCGIIASLTHLL*RVQFTA
Trigger: AGCCGTGAACTGCACACGCCAAAGAAGATGAGTCAA...ACTGGCAATGATGCCACACCTTGCCATGTCCACGCTGTTGGTCAAACCCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGAGTTCTGTGCCATCTTaGCAAGGTCTAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQSSVPS*QGLEKA
Trigger: GGCCTTCTCTAGACCTTGCCAAGATGGCACAGAACT...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGAAGGCCAAATGGTTCTaGTGTTACAGAAGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVKAKWF*CYRRKH
Trigger: ATGCTTCCTTCTGTAACACCAGAACCATTTGGCCTT...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCGGAATTAAGGCCAAATaGTTCTGGTGTTACAGAAGG +
Preference number: 4 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCGIKAK*FWCYRR
Trigger: CCTTCTGTAACACCAGAACCATTTGGCCTTAATTCC...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACTTTGTGCCGGTGGCTaGGCCTACAACAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPLCAGG*AYNRDA
Trigger: TGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAG...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAAAGGTGAGAAGCATCTaGACTCAACCTGCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: VRSIWTQPAEARRSLVHEKVRSI*TQPAEA
Trigger: CGCTTCTGCAGGTTGAGTCCAGATGCTTCTCACCTT...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGGTGCCACCCACATATTaGGAACTTGAACCACCATCC +
Preference number: 4 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQVPPTY*ELEPPS
Trigger: GGATGGTGGTTCAAGTTCCCAATATGTGGGTGGCAC...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTAGAGCCACCAGCTCTTaGGTTCGGCTGTCCGGGATC +
Preference number: 4 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLRATSS*VRLSGI
Trigger: GATCCCGGACAGCCGAACCCAAGAGCTGGTGGCTCT...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GACATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCTGGCTACAAAAATTTaGTTGAAAAGTAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: DMARCGIIASVGPEGARALATKI*LKSKAF
Trigger: GAAAGCCTTACTTTTCAACCAAATTTTTGTAGCCAG...GGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATAGTCCTCAAACCAGGTaGCATCTTTTAAACGAGTCC +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDSPQTR*HLLNES
Trigger: GGACTCGTTTAAAAGATGCCACCTGGTTTGAGGACT...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR TCA 90 bp GCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGAAAAAGGTGTGCTGTTGGCTaGGGGAGGACAGTATTCCAC +
Preference number: 4 (lower is better)
Translates to: ACQPTQGSAPVIFSLMGKRCAVG*GRTVFH
Trigger: GTGGAATACTGTCCTCCCTCAGCCAACAGCACACCT...TTTTCCCATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTAGCGCGCACGCTCGCCTaGCGGCGCCGAGCGCTTTGT +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLARTLA*RRRALC
Trigger: ACAAAGCGCTCGGCGCCGGCAGGCGAGCGTGCGCGC...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp GGTATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGAGCACACCCCAGCCCTaGCTGGGCCCACACCCCCTC +
Preference number: 4 (lower is better)
Translates to: GIEPGSFIYTVQVTSKFLSTPQP*LGPHPL
Trigger: GAGGGGGTGTGGGCCCAGGCAGGGCTGGGGTGTGCT...CAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp GCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGAAAAAGCTGTCCTCTGGGCTaGAGTAGTTCTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: ACQPTQGSAPVIFSLMGKSCPLG*SSSVDL
Trigger: CAGGTCCACAGAACTACTGCAGCCCAGAGGACAGCT...TTTTCCCATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTCAGAAACAGCCTATGTaGTATCTGTCGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSQKQPM*YLSPQP
Trigger: GGGCTGGGGCGACAGATAGCACATAGGCTGTTTCTG...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCGGCATTCCCAGATGCTaGTGCTCGGTTGGTCAATCT +
Preference number: 4 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFGIPRC*CSVGQS
Trigger: AGATTGACCAACCGAGCACCAGCATCTGGGAATGCC...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGATGATGTCCGGCAACTaGACATCTCATCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMMMSGN*TSHRRR
Trigger: CCTTCTCCGATGAGATGTCCAGTTGCCGGACATCAT...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGAGTTCTGTGCCATCTTaGCAAGGTCTAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMSSVPS*QGLEKA
Trigger: GGCCTTCTCTAGACCTTGCCAAGATGGCACAGAACT...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTAAGGCCAAATGGTTCTaGTGTTACAGAAGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPKAKWF*CYRRKH
Trigger: ATGCTTCCTTCTGTAACACCAGAACCATTTGGCCTT...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCCCAACAGCGTGGACATaGCAAGGTGTGGCATCATTG +
Preference number: 4 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFPTAWT*QGVASL
Trigger: CAATGATGCCACACCTTGCCATGTCCACGCTGTTGG...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCTACCTCCTGGGGAATTaGTGTCAGCAGAAACAGCTC +
Preference number: 4 (lower is better)
Translates to: GEASKSVFSANRSTKFLPYLLGN*CQQKQL
Trigger: GAGCTGTTTCTGCTGACATCAATTCCCCAGGAGGTA...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp GGTATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGTGCCTGGTCGCAGGGTaGGGAGAGCACGTTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GIEPGSFIYTVQVTSKFLCLVAG*GEHVGP
Trigger: CGGGCCAACGTGCTCTCCTCACCCTGCGACCAGGCA...CAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR GCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTTGTGGTCAACTCCTGTaGGCGGCGGGGCGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLCGQLL*AAGRSG
Trigger: CCCGGAGCGCCCCGCCGCGCACAGGAGTTGACCACA...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTCGGGTCTACGCTTTCTaGTCGCCACACTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLRVYAF*SPHFLK
Trigger: CTTCAGGAAGTGTGGCGACCAGAAAGCGTAGACCCG...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp GCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGAAAACACAAGACGCTTGCCTaGCTTCCCAGGCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: ACQPTQGSAPVIFSLMGKHKTLA*LPRPIN
Trigger: GTTTATTGGCCTGGGAAGCCAGGCAAGCGTCTTGTG...TTTTCCCATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392754.7
3UTR CAA 72 bp GGCCAGTCCAGCACCCCAGGGATTCTGTCTCTCACATaGGAATTAAGGCCAAATGGTTCTGGTGTTACAGAA +
Preference number: 4 (lower is better)
Translates to: GQSSTPGILSLT*ELRPNGSGVTE
Trigger: TTCTGTAACACCAGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTATGCCTGGTCGCAGGGTaGGGAGAGCACGTTGGCCCG +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLCLVAG*GEHVGP
Trigger: CGGGCCAACGTGCTCTCCTCACCCTGCGACCAGGCA...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTGTCCACACGGGGCTaGGCCTGGCACCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLGILNYICGLSSGFTGLLSTRG*AWHPLA
Trigger: TGCCAAGGGGTGCCAGGCTCAGCCCCGTGTGGACAG...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCATGCTTATCACTCAGTaGCCTGTCAGCCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GEASKSVFSANRSTKFLPMLITQ*PVSHRE
Trigger: TTCTCTGTGGCTGACAGGTCACTGAGTGATAAGCAT...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTCCTCCTCCCACGGGGTaGAGGTCAGGGCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTAPPPTG*RSGLQV
Trigger: CACCTGGAGCCCTGACCTGCACCCCGTGGGAGGAGG...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp AGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAACACGGGAGGCCCCAATTGCTATTGTTTaGAGAAGACGCCACATTCGC +
Preference number: 4 (lower is better)
Translates to: SPSFQPTDPPNFYPTREAPIAIV*RRRHIR
Trigger: GCGAATGTGGCGTCTTCTGCAAACAATAGCAATTGG...GGCCTCCCGTGTTGGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTTTCAAGAGGCTGCCCTaGTATCGTGCCATCCCTACA +
Preference number: 4 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLFKRLP*YRAIPT
Trigger: TGTAGGGATGGCACGATACCAGGGCAGCCTCTTGAA...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CAA 72 bp AGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTaGCAGAAGACGCCACATTCGCTAAAAGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: SHLLLSQPNCYC*QKTPHSLKARF
Trigger: GAATCTGGCTTTTAGCGAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
3UTR CAA 72 bp AATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATaGTTTGCAGAAGACGCCACATTCGCTAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: NEPLAPKPAQLL*FAEDATFAKSQ
Trigger: CTGGCTTTTAGCGAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR TCA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCCTTGCTAGGGGGTGCTaGGGGGTTCCCGTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASLARGC*GVPVVV
Trigger: GACCACAACGGGAACCCCTCAGCACCCCCTAGCAAG...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCCCCGGGAAGGGAGGCTaGAGCTGGAACTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASPGKGG*SWNSSA
Trigger: TGCAGAGGAGTTCCAGCTTCAGCCTCCCTTCCCGGG...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp GGTATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGGAGCCGGTGAGAGGCTaGCACACCCGCTGTATGACG +
Preference number: 4 (lower is better)
Translates to: GIEPGSFIYTVQVTSKFLEPVRG*HTRCMT
Trigger: CGTCATACAGCGGGTGTGTCAGCCTCTCACCGGCTC...CAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGCCACCATCCAACAATTaGACAAACATTTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQPPSNN*TNICSC
Trigger: ACAGGAACAAATGTTTGTTCAATTGTTGGATGGTGG...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR GCA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTCAAGAGAGGGACCGCTaGAGGTCCAGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTAQERDR*RSSRPP
Trigger: AGGAGGCCGGCTGGACCTGCAGCGGTCCCTCTCTTG...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCCTAAGCCAGCCCAATTaGTATTGTTTGCAGAAGACG +
Preference number: 4 (lower is better)
Translates to: GEASKSVFSANRSTKFLPLSQPN*YCLQKT
Trigger: CGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAG...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp ATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGAGACCCCACGGGCCCAGGTaGACGTCTGCCCGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: IEPGSFIYTVQVTSKFLRPHGPR*TSARAN
Trigger: ATTTGCACGGGCAGACGTGCACCTGGGCCCGTGGGG...TCTCAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCGACAGTGAGCGGCACTaGCGCTTGCTAGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASDSERH*RLLGGA
Trigger: AGCACCCCCTAGCAAGCGCCAGTGCCGCTCACTGTC...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCGAGCCTGGCACCCCTTaGCAGGGCTGCCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASEPGTP*QGCPPN
Trigger: ATTTGGAGGGCAGCCCTGCCAAGGGGTGCCAGGCTC...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTATGCGGGAAAGGCCGCTaGAGCGTCTCGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLCGKGR*SVSPAL
Trigger: CAGAGCTGGCGAGACGCTCCAGCGGCCTTTCCCGCA...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp GAGCTACAAACCTTGAGAGGAGAGCAAACCCTCAGGGGGCTAGGCTCCTCGGATTTATTTTTAGCCTTATaGGAAAATGAGCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: ELQTLRGEQTLRGLGSSDLFLAL*ENEPLA
Trigger: AGCAAGTGGCTCATTTTCCCATAAGGCTAAAAATAA...ATCCGAGGAGCCTAGCCCCCTGAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp GGTATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGTGCCTCAGCCTCAGCTaGCACCGTCCACCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GIEPGSFIYTVQVTSKFLCLSLS*HRPPPS
Trigger: TGAGGGAGGTGGACGGTGCCAGCTGAGGCTGAGGCA...CAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTAAAAGTGTAGGTCCTTaGCTCATCTTCTTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSKSVGP*LIFFGV
Trigger: CACGCCAAAGAAGATGAGTCAAGGACCTACACTTTT...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTAAATAGCGCTGGACGCTaGCCCCGCTGTAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLNSAGR*PRCSSV
Trigger: GACGCTGCTACAGCGGGGGCAGCGTCCAGCGCTATT...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGACCCCTTGGCAGGGCTaGCCTCCAAATCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLGILNYICGLSSGFTGLTPWQG*PPNRWW
Trigger: CCACCACCGATTTGGAGGGCAGCCCTGCCAAGGGGT...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTCCAATTGCTATTGTTTaGAGAAGACGCCACATTCGC +
Preference number: 4 (lower is better)
Translates to: SSTPGILSLTLELRPNGSPIAIV*RRRHIR
Trigger: GCGAATGTGGCGTCTTCTGCAAACAATAGCAATTGG...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTTTGGCCACTCACCCTTaGGGTGGGGCCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLLATHP*GGALLG
Trigger: TCCCAGAAGGGCCCCACCCCAAGGGTGAGTGGCCAA...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCAGGTCCCACATGCAATaGAGTCAGCTCCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASRSHMQ*SQLPGC
Trigger: GCACCCGGGGAGCTGACTCCATTGCATGTGGGACCT...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp ATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGAGACATCTCTCAGGGCTGTaGGGCTGGGGGCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: IEPGSFIYTVQVTSKFLRHLSGL*GWGLSA
Trigger: GGCAGAAAGCCCCCAGCCCCACAGCCCTGAGAGATG...TCTCAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTCAGCTCCCCGGGTGCTaGGGCTTTCACTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTAQLPGC*GFHLGP
Trigger: TGGTCCTAAGTGAAAGCCTCAGCACCCGGGGAGCTG...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTAATCGGAGAAGGACAGTaGGCGGCACTGGCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLIGEGQ*AALALA
Trigger: AGCAAGCGCCAGTGCCGCTCACTGTCCTTCTCCGAT...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTAGCCCAAGGGCCTCCATaGTGTCCGGCAACTGGACAT +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLAQGPP*CPATGH
Trigger: ATGTCCAGTTGCCGGACATCATGGAGGCCCTTGGGC...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCCGAGCAAAAGCAAAGTaGCTACAAAAGTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GEASKSVFSANRSTKFLPRAKAK*LQKCFE
Trigger: TTCAAAGCACTTTTGTAGTCACTTTGCTTTTGCTCG...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTGAAGGCCTCTGCTCTTaGACTTCTTCAGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLEGLCS*TSSGRR
Trigger: GCGGCGCCCTGAAGAAGTGCAAGAGCAGAGGCCTTC...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp ATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGAGAGCCACAGAGAAGGGCTaGCATCTGCTAACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: IEPGSFIYTVQVTSKFLRATEKG*HLLTLP
Trigger: GGGCAGGGTTAGCAGATGGCAGCCCTTCTCTGTGGC...TCTCAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCACTCACCCTTGGGGTaGGGCCCTTCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLHSPLG*GPSGKW
Trigger: CCATTTCCCAGAAGGGCCCCACCCCAAGGGTGAGTG...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCGGGAGTCCAGACTTTaGAGCCCAAGGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLRESRL*SPRASM
Trigger: CATGGAGGCCCTTGGGCTCCAAAGTCTGGACTCCCG...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTCCTCCAAATCGGTGGTaGAGTCCTGCCTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTAPPNRW*SPAWSQ
Trigger: CTGCGACCAGGCAGGACTCCACCACCGATTTGGAGG...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTATGCCCTCCAAATCGGTaGTGGAGTCCTGCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLCPPNR*WSPAWS
Trigger: CGACCAGGCAGGACTCCACCACCGATTTGGAGGGCA...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTATTAAGGACACACGGCTaGGAGCGGCTGCGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLLRTHG*ERLRER
Trigger: CCTTTCCCGCAGCCGCTCCCAGCCGTGTGTCCTTAA...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp GGTATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGGTGGGTGATGTGCCCTaGTTACAGCCAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GIEPGSFIYTVQVTSKFLVGDVP*LQPAVL
Trigger: GAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC...CAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACTTATTTTTAGCCTTATaGGAAAATGAGCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDLFLAL*ENEPLA
Trigger: AGCAAGTGGCTCATTTTCCCATAAGGCTAAAAATAA...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGGCTGAAGGTCCCACATaGAATGGAGTCAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LLGILNYICGLSSGFTGLAEGPT*NGVSSP
Trigger: CGGGGAGCTGACTCCATTGCATGTGGGACCTTCAGC...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTAGTGTTGAGGCAGGTGTaGTGTTGGCTGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLVLRQV*CWLRED
Trigger: GTCCTCCCTCAGCCAACAGCACACCTGCCTCAACAC...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCCCATTCATCAAACGCTaGAAAGAGCTTTTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GEASKSVFSANRSTKFLPPFIKR*KELFFV
Trigger: AACAAAGAAAAGCTCTTTGCAGCGTTTGATGAATGG...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTAGGGGTGGGGCCCTTCTaGGAAATGGCCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLGVGPF*EMAKCG
Trigger: ACCACATTTGGCCATTTCCCAGAAGGGCCCCACCCC...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTGAAACAGCTCCCCATTaGCCACTCACCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLETAPH*PLTLGV
Trigger: CACCCCAAGGGTGAGTGGCCAATGGGGAGCTGTTTC...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTATCACTTGGGCAGACTTaGGGTGAGTACCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLSLGQT*GEYLLG
Trigger: CCCCAGGAGGTACTCACCCCAAGTCTGCCCAAGTGA...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTGAGGGGTTCCCGTTGTaGTCGCTGATGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLEGFPL*SLMLRS
Trigger: AGACCTCAGCATCAGCGACCACAACGGGAACCCCTC...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTGTGCAGTTCACGGCTaGAGGTCCCACATGCAATGG +
Preference number: 4 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTACAVHG*RSHMQW
Trigger: CCATTGCATGTGGGACCTTCAGCCGTGAACTGCACA...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGTCCTCTGCATGGTGCTaGAGCCGTTGGAATAGCGCT +
Preference number: 4 (lower is better)
Translates to: LLGILNYICGLSSGFTGLSSAWC*SRWNSA
Trigger: AGCGCTATTCCAACGGCTTCAGCACCATGCAGAGGA...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTAGGAAAACTGCTCATGTaGGCAAGAGAGGGACCGCTG +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLGKLLM*AREGPL
Trigger: CAGCGGTCCCTCTCTTGCTCACATGAGCAGTTTTCC...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTAGGTGTGCTGTTGGCTaGGGGAGGACAGTATTCCAC +
Preference number: 4 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTARCAVG*GRTVFH
Trigger: GTGGAATACTGTCCTCCCTCAGCCAACAGCACACCT...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTCGAGCAAAAGCAAAGTaGCTACAAAAGTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLRAKAK*LQKCFE
Trigger: TTCAAAGCACTTTTGTAGTCACTTTGCTTTTGCTCG...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR GCA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTGTCACTGCCTCCCGGTaGCATAGTGAGCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTAVTASR*HSELSF
Trigger: AAAGGACAGCTCACTATGGCACCGGGAGGCAGTGAC...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGGGAAATGGCCAAATGTaGTCAACTCCTGTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LLGILNYICGLSSGFTGLGNGQM*STPVRG
Trigger: GCCGCGCACAGGAGTTGACCACATTTGGCCATTTCC...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTGGCTCCATCCCAGGGTaGGTATCAGCCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLGSIPG*VSAIFT
Trigger: AGTGAAGATGGCTGATACCCACCCTGGGATGGAGCC...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCGGCATTCCCAGATGCTaGTGCTCGGTTGGTCAATCT +
Preference number: 4 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASGIPRC*CSVGQS
Trigger: AGATTGACCAACCGAGCACCAGCATCTGGGAATGCC...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp GGTATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGCGACTTGTCACTTCCTaGAGTGTTTGCAACTCGTCC +
Preference number: 4 (lower is better)
Translates to: GIEPGSFIYTVQVTSKFLRLVTS*SVCNSS
Trigger: GGACGAGTTGCAAACACTTCAGGAAGTGACAAGTCG...CAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR TCA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTCGGTTGGTCAATCTaGAGAGGGCATTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLGILNYICGLSSGFTGLLGWSI*RGHFLS
Trigger: GGACAGGAAATGCCCTCTTCAGATTGACCAACCGAG...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTAAAGCTGGAACTCCTCTaGATGGTGCTGAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLKLELL*MVLKPL
Trigger: CAACGGCTTCAGCACCATGCAGAGGAGTTCCAGCTT...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp GGTATTGAACCAGGAAGCTTTATTTACACAGTACAAGTAACAAGCAAATTCCTGGGCCGCCTCCACATTTaGTCTAAGAAGACATGGTCT +
Preference number: 4 (lower is better)
Translates to: GIEPGSFIYTVQVTSKFLGRLHI*SKKTWS
Trigger: AGACCATGTCTTCTTAGAGCAAATGTGGAGGCGGCC...CAGGAATTTGCTTGTTACTTGTACTGTGTAAATAAAGCTTCCTGGTTCAATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CCA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGGGCCCTTCTGGGAAATaGCCAAATGTGGTCAACTCC +
Preference number: 4 (lower is better)
Translates to: LLGILNYICGLSSGFTGLGPSGK*PNVVNS
Trigger: GGAGTTGACCACATTTGGCCATTTCCCAGAAGGGCC...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTGGGGTGAGTACCTCCTaGGGAATTGATGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLGVSTS*GIDVSR
Trigger: TCTGCTGACATCAATTCCCCAGGAGGTACTCACCCC...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCATGATGTCCGGCAACTaGACATCTCATCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASMMSGN*TSHRRR
Trigger: CCTTCTCCGATGAGATGTCCAGTTGCCGGACATCAT...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTAGGCAGGTGTGCTGTTaGCTGAGGGAGGACAGTATT +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLRQVCC*LREDSI
Trigger: AATACTGTCCTCCCTCAGCCAACAGCACACCTGCCT...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCGACTTGTCACTTCCTaGAGTGTTTGCAACTCGTCC +
Preference number: 4 (lower is better)
Translates to: LLGILNYICGLSSGFTGLRLVTS*SVCNSS
Trigger: GGACGAGTTGCAAACACTTCAGGAAGTGACAAGTCG...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTATACCTCCTGGGGAATTaGTGTCAGCAGAAACAGCTC +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLYLLGN*CQQKQL
Trigger: GAGCTGTTTCTGCTGACATCAATTCCCCAGGAGGTA...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCTAGAGAAGGCCTCTaGTCTTGCACTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTASREGL*SCTSSG
Trigger: CCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGA...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTATCTGTGCCATCTTaGCAAGGTCTAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLGILNYICGLSSGFTGLLSVPS*QGLEKA
Trigger: GGCCTTCTCTAGACCTTGCCAAGATGGCACAGATAG...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTGATGTGCCTTCCTCATaGGGCTATCTGTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLDVPSS*GYLCHL
Trigger: AAGATGGCACAGATAGCCCCATGAGGAAGGCACATC...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR GCA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTAATTCCCAGATGCTGGTaGTCGGTTGGTCAATCTGAA +
Preference number: 4 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLIPRCW*SVGQSE
Trigger: TTCAGATTGACCAACCGAGCACCAGCATCTGGGAAT...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CCA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTTTGACTCATCTTCTTTaGCGTGTGCAGTTCACGGCT +
Preference number: 4 (lower is better)
Translates to: LGILNYICGLSSGFTGLLLTHLL*RVQFTA
Trigger: AGCCGTGAACTGCACACGCCAAAGAAGATGAGTCAA...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR TCA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGAAAAGTGTAGGTCCTTaGCTCATCTTCTTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LLGILNYICGLSSGFTGLKSVGP*LIFFGV
Trigger: CACGCCAAAGAAGATGAGTCAAGGACCTACACTTTT...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS GCA 90 bp GTCGTCCGGGGTGCCCGCCGCGCGTCCGCCGCGCGCACGCTCGCCTaGCGGCGCCGAGCGCTTTGTACGAGCGACTCCCGGGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: VVRGARRASAARTLA*RRRALCTSDSRGGG
Trigger: TCCTCCTCCCCGGGAGTCGCTCGTACAAAGCGCTCGGCGCCGGCAGGCGAGCGTGCGCGCGGCGGACGCGCGGCGGGCACCCCGGACGAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280780.6
ENST00000337318.8
CDS GCA 90 bp CAGGGAGCAGAGGCTGTTCCCAGGGGCCCCGCGGTCCCGCCAGGCTaGAGCCGGCTCCGCTCTCCTGCCACAATCCTCGTCCAGGGCGCA +
Preference number: 5 (lower is better)
Translates to: QGAEAVPRGPAVPPG*SRLRSPATILVQGA
Trigger: TGCGCCCTGGACGAGGATTGTGGCAGGAGAGCGGAGCCGGCTGCAGCCTGGCGGGACCGCGGGGCCCCTGGGAACAGCCTCTGCTCCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS GCA 90 bp CAGGGGCCCCGCGGTCCCGCCAGGCTGCAGCCGGCTCCGCTCTCCTaGCACAATCCTCGTCCAGGGCGCAGCTGTCTGACTCCTCACAGG +
Preference number: 5 (lower is better)
Translates to: QGPRGPARLQPAPLS*HNPRPGRSCLTPHR
Trigger: CCTGTGAGGAGTCAGACAGCTGCGCCCTGGACGAGGATTGTGGCAGGAGAGCGGAGCCGGCTGCAGCCTGGCGGGACCGCGGGGCCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS CCA 90 bp CCGGAGGCTGAGAGCAGGGCGGTCCAGGCCCTGGTGTTGCTGACGTaGCGGGCGAAGGGGCTCTGGGGACCGCAGTCCTCTGTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: PEAESRAVQALVLLT*RAKGLWGPQSSVPA
Trigger: CGCAGGGACAGAGGACTGCGGTCCCCAGAGCCCCTTCGCCCGCCACGTCAGCAACACCAGGGCCTGGACCGCCCTGCTCTCAGCCTCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS GCA 90 bp CCCGCTCCTGCAAGGCGAGCGCGGCGGCGAAGGCGACGGCACAAATaGCCACCCCAGGATCCCAGACCCGGAATGCAAGCCATTCCGGGG +
Preference number: 5 (lower is better)
Translates to: PAPARRARRRRRRHK*PPQDPRPGMQAIPG
Trigger: CCCCGGAATGGCTTGCATTCCGGGTCTGGGATCCTGGGGTGGGCATTTGTGCCGTCGCCTTCGCCGCCGCGCTCGCCTTGCAGGAGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS CCA 90 bp ACCCCTTGGCAGGGCTGCCCTCCAAATCGGTGGTGGAGTCCTGCCTaGTCGCAGGGTGAGGAGAGCACGTTGGCCCGGGAAGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TPWQGCPPNRWWSPA*SQGEESTLAREGRL
Trigger: CAGCCTCCCTTCCCGGGCCAACGTGCTCTCCTCACCCTGCGACCAGGCAGGACTCCACCACCGATTTGGAGGGCAGCCCTGCCAAGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GACATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCGGTGAGGAGAGCACGTaGGCCCGGGAAGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: DMARCGIIASVGPEGARAGEEST*AREGRL
Trigger: CAGCCTCCCTTCCCGGGCCAACGTGCTCTCCTCACC...GGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CAA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTACATCAGGCCCACGAGTaGGGCTCCCCTTCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLHQAHE*GSPSRA
Trigger: GGCCCTTGAAGGGGAGCCCAACTCGTGGGCCTGATG...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp CCGAGACTCCGGACATGGCTTACCCTCTGGAGGGCCAGTCCAGCACCCCAGGGACATCAGGCCCACGAGTaGGGCTCCCCTTCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: PRLRTWLTLWRASPAPQGHQAHE*GSPSRA
Trigger: GGCCCTTGAAGGGGAGCCCAACTCGTGGGCCTGATG...TCCCTGGGGTGCTGGACTGGCCCTCCAGAGGGTAAGCCATGTCCGGAGTCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS TCA 90 bp GGGCTGCCCTCCAAATCGGTGGTGGAGTCCTGCCTGGTCGCAGGGTaGGGAGAGCACGTTGGCCCGGGAAGGGAGGCTGAAGCTGGAACT +
Preference number: 5 (lower is better)
Translates to: GLPSKSVVESCLVAG*GEHVGPGREAEAGT
Trigger: AGTTCCAGCTTCAGCCTCCCTTCCCGGGCCAACGTGCTCTCCTCACCCTGCGACCAGGCAGGACTCCACCACCGATTTGGAGGGCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS GCA 90 bp TTCCTGTTGAACAACCGTCAGCCTGGCTCCATCTGCACCCGCTCCTaGAAGGCGAGCGCGGCGGCGAAGGCGACGGCACAAATGCCCACC +
Preference number: 5 (lower is better)
Translates to: FLLNNRQPGSICTRS*KASAAAKATAQMPT
Trigger: GGTGGGCATTTGTGCCGTCGCCTTCGCCGCCGCGCTCGCCTTGCAGGAGCGGGTGCAGATGGAGCCAGGCTGACGGTTGTTCAACAGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS CCA 90 bp TCGTCCAGGGCGCAGCTGTCTGACTCCTCACAGGACAGGTCCTCCTaGCAGGCGAGGTGGTCGTCGAAGGAAGGGGGAAGAGGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SSRAQLSDSSQDRSS*QARWSSKEGGRGSG
Trigger: CCCTGAGCCTCTTCCCCCTTCCTTCGACGACCACCTCGCCTGCCAGGAGGACCTGTCCTGTGAGGAGTCAGACAGCTGCGCCCTGGACGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp TTGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGAGTGGGGGCTGTCGATGCCGGTGGCAGGCAAGGTTaGAGGGCAGGTCACCCACAC +
Preference number: 5 (lower is better)
Translates to: LGSPSRAHLVPRVGAVDAGGRQG*RAGHPH
Trigger: GTGTGGGTGACCTGCCCTCAAACCTTGCCTGCCACC...GGCATCGACAGCCCCCACTCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CAA 90 bp GCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTCAGGACTGGGCTCCCCCTAAGCAGCACAAGACGCTaGCCTGGCTTCCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: AGGWAYNRDAALRTGLPLSSTRR*PGFPGQ
Trigger: TTGGCCTGGGAAGCCAGGCAAGCGTCTTGTGCTGCT...TAGGGGGAGCCCAGTCCTGAGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS CCA 90 bp GTCCGGCAACTGGACATCTCATCGGAGAAGGACAGTGAGCGGCACTaGCGCTTGCTAGGGGGTGCTGAGGGGTTCCCGTTGTGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: VRQLDISSEKDSERH*RLLGGAEGFPLWSL
Trigger: CAGCGACCACAACGGGAACCCCTCAGCACCCCCTAGCAAGCGCCAGTGCCGCTCACTGTCCTTCTCCGATGAGATGTCCAGTTGCCGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 90 bp CGCCGCCTTTTAACACCGACCTTCTTGTCGTTAAGGACACACGGCTaGGAGCGGCTGCGGGAAAGGCCGCTGGAGCGTCTCGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RRLLTPTFLSLRTHG*ERLRERPLERLASS
Trigger: AGAGCTGGCGAGACGCTCCAGCGGCCTTTCCCGCAGCCGCTCCCAGCCGTGTGTCCTTAACGACAAGAAGGTCGGTGTTAAAAGGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp TTGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGAGTGGGGGCTGTCGATGCCAGAAACAGCTCCCCATaGGCCACTCACCCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: LGSPSRAHLVPRVGAVDARNSSP*ATHPWG
Trigger: ACCCCAAGGGTGAGTGGCCAATGGGGAGCTGTTTCT...GGCATCGACAGCCCCCACTCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCGTCCAGGCCCTGGTGTaGCTGACGTGGCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCVQALV*LTWRAK
Trigger: CTTCGCCCGCCACGTCAGCAACACCAGGGCCTGGAC...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp AGAGCGGTGCCCAGCTCTGCCGGGGACAACAGAGACTGCCCAACATCCCACAGGCCTCCAAATCGTTCCTaGGGCCCGAGACTCCGGACA +
Preference number: 5 (lower is better)
Translates to: RAVPSSAGDNRDCPTSHRPPNRS*GPRLRT
Trigger: TGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAGG...CCTGTGGGATGTTGGGCAGTCTCTGTTGTCCCCGGCAGAGCTGGGCACCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS CCA 90 bp GAGCGGCACTGGCGCTTGCTAGGGGGTGCTGAGGGGTTCCCGTTGTaGTCGCTGATGCTGAGGTCTTTGATCAGACTGGTCACAGCGCAG +
Preference number: 5 (lower is better)
Translates to: ERHWRLLGGAEGFPL*SLMLRSLIRLVTAQ
Trigger: CTGCGCTGTGACCAGTCTGATCAAAGACCTCAGCATCAGCGACCACAACGGGAACCCCTCAGCACCCCCTAGCAAGCGCCAGTGCCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GACATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCAGAAACAGCTCCCCATaGGCCACTCACCCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: DMARCGIIASVGPEGARARNSSP*ATHPWG
Trigger: ACCCCAAGGGTGAGTGGCCAATGGGGAGCTGTTTCT...GGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CAA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTGGTGAGGAGAGCACGTaGGCCCGGGAAGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPGEEST*AREGRL
Trigger: CAGCCTCCCTTCCCGGGCCAACGTGCTCTCCTCACC...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGGCCCTGGGGCTGGGCTaGCTGGTCGATGGGACCAGC +
Preference number: 5 (lower is better)
Translates to: DYKSALNARVSQHKGAHQALGLG*LVDGTS
Trigger: GCTGGTCCCATCGACCAGCAAGCCCAGCCCCAGGGC...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS GCA 90 bp TATTCCACAAAGGAAAACTGCTCATGTGAGCAAGAGAGGGACCGCTaGAGGTCCAGCCGGCCTCCTCCCACGGGGTGCAGGTCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: YSTKENCSCEQERDR*RSSRPPPTGCRSGL
Trigger: GAGCCCTGACCTGCACCCCGTGGGAGGAGGCCGGCTGGACCTGCAGCGGTCCCTCTCTTGCTCACATGAGCAGTTTTCCTTTGTGGAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS GCA 90 bp AACAAACATTTGTTCCTGTTGAACAACCGTCAGCCTGGCTCCATCTaGACCCGCTCCTGCAAGGCGAGCGCGGCGGCGAAGGCGACGGCA +
Preference number: 5 (lower is better)
Translates to: NKHLFLLNNRQPGSI*TRSCKASAAAKATA
Trigger: TGCCGTCGCCTTCGCCGCCGCGCTCGCCTTGCAGGAGCGGGTGCAGATGGAGCCAGGCTGACGGTTGTTCAACAGGAACAAATGTTTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CAA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTATTGGCCACTCACCCTaGGGGTGGGGCCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPIGHSP*GWGPSG
Trigger: CCCAGAAGGGCCCCACCCCAAGGGTGAGTGGCCAAT...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GGGGAGGTGGCTGTGACTCAGCCAGCTCCACAGCTTGTCCCTTCCTGCCACCAGGATGCTGGTGCTCGGTaGGTCAATCTGAAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GEVAVTQPAPQLVPSCHQDAGAR*VNLKRA
Trigger: TGCCCTCTTCAGATTGACCAACCGAGCACCAGCATC...CTGGTGGCAGGAAGGGACAAGCTGTGGAGCTGGCTGAGTCACAGCCACCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CAA 90 bp TTCTGTGGACCTGGTGGCTGCCACGCTCGGGGAGCCGGTGAGAGGCTGACACACGAGGAGCTACAAACCTaGAGAGGAGAGCAAACCCTC +
Preference number: 5 (lower is better)
Translates to: FCGPGGCHARGAGERLTHEELQT*RGEQTL
Trigger: GAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTCCTC...GTGTGTCAGCCTCTCACCGGCTCCCCGAGCGTGGCAGCCACCAGGTCCACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCCAAGGTGTGGCATCATaGCCAGTGTGGGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCAQGVAS*PVWGQR
Trigger: CCTCTGGCCCCACACTGGCAATGATGCCACACCTTG...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS CCA 90 bp GAGTCCAGACTTTGGAGCCCAAGGGCCTCCATGATGTCCGGCAACTaGACATCTCATCGGAGAAGGACAGTGAGCGGCACTGGCGCTTGC +
Preference number: 5 (lower is better)
Translates to: ESRLWSPRASMMSGN*TSHRRRTVSGTGAC
Trigger: GCAAGCGCCAGTGCCGCTCACTGTCCTTCTCCGATGAGATGTCCAGTTGCCGGACATCATGGAGGCCCTTGGGCTCCAAAGTCTGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGAGCGGCACTGGCGCTaGCTAGGGGGTGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMERHWR*LGGAEG
Trigger: CCCCTCAGCACCCCCTAGCAAGCGCCAGTGCCGCTC...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCACGGGAGTCCAGACTTaGGAGCCCAAGGGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSTGVQT*EPKGLH
Trigger: ATGGAGGCCCTTGGGCTCCAAAGTCTGGACTCCCGT...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCTCGCCAGCTCTGGTGTaGAGGCAGGTGTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCSPALV*RQVCCW
Trigger: CCAACAGCACACCTGCCTCAACACCAGAGCTGGCGA...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGGTCCAGGCCCTGGTGTaGCTGACGTGGCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQVQALV*LTWRAK
Trigger: CTTCGCCCGCCACGTCAGCAACACCAGGGCCTGGAC...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GAGCCATGGGGTCAGCCTCTCCATGCTGTAGGAGAGGCAAGCAAGTCCGTCTTTGGGCGTGGGCTTGTCTaGAGGTGGGTGATGTGCCCT +
Preference number: 5 (lower is better)
Translates to: EPWGQPLHAVGEASKSVFGRGLV*RWVMCP
Trigger: AGGGCACATCACCCACCTCAAGACAAGCCCACGCCC...AAAGACGGACTTGCTTGCCTCTCCTACAGCATGGAGAGGCTGACCCCATGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp AGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCCCTATGGCCTGGCACGGCTaGCTTCTGGCTCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: SMNPALCRWLGLQQRCSPMAWHG*LLALPF
Trigger: GAAGGGCAGAGCCAGAAGCAAGCCGTGCCAGGCCAT...AGGGCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CAA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCGAGCGGCACTGGCGCTaGCTAGGGGGTGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFERHWR*LGGAEG
Trigger: CCCCTCAGCACCCCCTAGCAAGCGCCAGTGCCGCTC...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACCAGAGCCACCAGCTCTaGGGTTCGGCTGTCCGGGAT +
Preference number: 5 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDQSHQL*GSAVRD
Trigger: ATCCCGGACAGCCGAACCCAAGAGCTGGTGGCTCTG...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CAA 90 bp TTGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGAGTGGGGGCTGTCGATGCCAAACATTTGTTCCTGTaGAACAACCGTCAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LGSPSRAHLVPRVGAVDAKHLFL*NNRQPG
Trigger: GCCAGGCTGACGGTTGTTCAACAGGAACAAATGTTT...GGCATCGACAGCCCCCACTCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS GCA 90 bp TCTTTGATCAGACTGGTCACAGCGCAGGCGGTCACTGCCTCCCGGTaGCATAGTGAGCTGTCCTTTTCAGGCAGGCATTCCCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: SLIRLVTAQAVTASR*HSELSFSGRHSQML
Trigger: CAGCATCTGGGAATGCCTGCCTGAAAAGGACAGCTCACTATGGCACCGGGAGGCAGTGACCGCCTGCGCTGTGACCAGTCTGATCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS GCA 90 bp GGTGTGCTGTTGGCTGAGGGAGGACAGTATTCCACAAAGGAAAACTaGTCATGTGAGCAAGAGAGGGACCGCTGCAGGTCCAGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: GVLLAEGGQYSTKEN*SCEQERDRCRSSRP
Trigger: AGGCCGGCTGGACCTGCAGCGGTCCCTCTCTTGCTCACATGAGCAGTTTTCCTTTGTGGAATACTGTCCTCCCTCAGCCAACAGCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 90 bp CCAAGTCCTCAAACCAGGTGGCATCTTTTAAACGAGTCCAGGATCTaGAGCAAGGAGGAATCTCCCTGCCAGCCGGTGGGGACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PSPQTRWHLLNESRI*SKEESPCQPVGTAG
Trigger: CCCAGCAGTCCCCACCGGCTGGCAGGGAGATTCCTCCTTGCTCCAGATCCTGGACTCGTTTAAAAGATGCCACCTGGTTTGAGGACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CAA 90 bp CATGGCAAGGTGTGGCATCATTGCCAGTGTGGGGCCAGAGGGTGCCCGAGCCCCGAGGAGGAAATCGACTaGTCACTTCCTGAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: HGKVWHHCQCGARGCPSPEEEID*SLPEVF
Trigger: AAACACTTCAGGAAGTGACAAGTCGATTTCCTCCTC...GGGGCTCGGGCACCCTCTGGCCCCACACTGGCAATGATGCCACACCTTGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CAA 90 bp GGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCAGCGATGCTGGTGCTCGGTaGGTCAATCTGAAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GSMNPALCRWLGLQQRCSDAGAR*VNLKRA
Trigger: TGCCCTCTTCAGATTGACCAACCGAGCACCAGCATC...GCTGCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACACGGGAGTCCAGACTTaGGAGCCCAAGGGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDTGVQT*EPKGLH
Trigger: ATGGAGGCCCTTGGGCTCCAAAGTCTGGACTCCCGT...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GAGGGCAGGTCACCCACACCCCAGTCCCACGACATATACCTGTCACCATGTGCCCAGTTCTGTGCCATCTaGGCAAGGTCTAGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: EGRSPTPQSHDIYLSPCAQFCAI*ARSREG
Trigger: GCCTTCTCTAGACCTTGCCAAGATGGCACAGAACTG...GGCACATGGTGACAGGTATATGTCGTGGGACTGGGGTGTGGGTGACCTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS CCA 90 bp GGAATTGATGTCAGCAGAAACAGCTCCCCATTGGCCACTCACCCTTaGGGTGGGGCCCTTCTGGGAAATGGCCAAATGTGGTCAACTCCC +
Preference number: 5 (lower is better)
Translates to: GIDVSRNSSPLATHP*GGALLGNGQMWSTP
Trigger: GGGAGTTGACCACATTTGGCCATTTCCCAGAAGGGCCCCACCCCAAGGGTGAGTGGCCAATGGGGAGCTGTTTCTGCTGACATCAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CAA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGCTGATGCTGAGGTCTTaGATCAGACTGGTCACAGCG +
Preference number: 5 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVLMLRS*IRLVTA
Trigger: CGCTGTGACCAGTCTGATCAAAGACCTCAGCATCAG...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGCTGAGGGGTTCCCGTaGTGGTCGCTGATGCTGAGG +
Preference number: 5 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMAEGFP*WSLMLR
Trigger: CCTCAGCATCAGCGACCACAACGGGAACCCCTCAGC...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GTGAGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAATCGCCAGCTCTGGTGTaGAGGCAGGTGTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: VRSIWTQPAEARRSLVHESPALV*RQVCCW
Trigger: CCAACAGCACACCTGCCTCAACACCAGAGCTGGCGA...TTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGCCTCCAAATCGTTCCTaGGGCCCGAGACTCCGGACA +
Preference number: 5 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQPPNRS*GPRLRT
Trigger: TGTCCGGAGTCTCGGGCCCAAGGAACGATTTGGAGG...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGAAAAGTCGATGGGACCAGCTaGCGGGGAGGTGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ACQPTQGSAPVIFSLMGKVDGTS*RGGGEV
Trigger: CACCTCCCCACCTCCCCGCAAGCTGGTCCCATCGAC...TTTTCCCATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CAA 90 bp TTGGGCTCCCCTTCAAGGGCCCACCTAGTGCCCAGAGTGGGGGCTGTCGATGCCGCAAAGAGCTTTTCTTaGTTCACCATCGTCCTAAGT +
Preference number: 5 (lower is better)
Translates to: LGSPSRAHLVPRVGAVDAAKSFS*FTIVLS
Trigger: ACTTAGGACGATGGTGAACAAAGAAAAGCTCTTTGC...GGCATCGACAGCCCCCACTCTGGGCACTAGGTGGGCCCTTGAAGGGGAGCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS GCA 90 bp CCCGGTGCCATAGTGAGCTGTCCTTTTCAGGCAGGCATTCCCAGATaGTGGTGCTCGGTTGGTCAATCTGAAGAGGGCATTTCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: PGAIVSCPFQAGIPR*WCSVGQSEEGISCP
Trigger: TGGACAGGAAATGCCCTCTTCAGATTGACCAACCGAGCACCAGCATCTGGGAATGCCTGCCTGAAAAGGACAGCTCACTATGGCACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS GCA 90 bp CATGGGGCTATCTGTGCCATCTTGGCAAGGTCTAGAGAAGGCCTCTaGTCTTGCACTTCTTCAGGGCGCCGCCTTTTAACACCGACCTTC +
Preference number: 5 (lower is better)
Translates to: HGAICAILARSREGL*SCTSSGRRLLTPTF
Trigger: GAAGGTCGGTGTTAAAAGGCGGCGCCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGACCTTGCCAAGATGGCACAGATAGCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS CCA 90 bp GGAATTGATGTCAGCAGAAACAGCTCCCCATTGGCCACTCACCCTTaGGGTGGGGCCCTTCTGGGAAATGGCCAAATGTGGTCAACTCCT +
Preference number: 5 (lower is better)
Translates to: GIDVSRNSSPLATHP*GGALLGNGQMWSTP
Trigger: AGGAGTTGACCACATTTGGCCATTTCCCAGAAGGGCCCCACCCCAAGGGTGAGTGGCCAATGGGGAGCTGTTTCTGCTGACATCAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280780.6
ENST00000337318.8
CDS CCA 90 bp ACGAGTCCAGGATCTGGAGCAAGGAGGAATCTCCCTGCCAGCCGGTaGGGACTGCTGGGAACACATATGCTAGCATGTCATTTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: TSPGSGARRNLPASR*GLLGTHMLACHLEV
Trigger: GACTTCCAAATGACATGCTAGCATATGTGTTCCCAGCAGTCCCCACCGGCTGGCAGGGAGATTCCTCCTTGCTCCAGATCCTGGACTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CAA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTATTGGCCACTCACCCTaGGGGTGGGGCCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: SSTPGILSLTLELRPNGSIGHSP*GWGPSG
Trigger: CCCAGAAGGGCCCCACCCCAAGGGTGAGTGGCCAAT...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCGTACCTCCTGGGGAATaGATGTCAGCAGAAACAGCT +
Preference number: 5 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCVPPGE*MSAETA
Trigger: AGCTGTTTCTGCTGACATCAATTCCCCAGGAGGTAC...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCGCTGAGGGGTTCCCGTaGTGGTCGCTGATGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GEASKSVFSANRSTKFLPAEGFP*WSLMLR
Trigger: CCTCAGCATCAGCGACCACAACGGGAACCCCTCAGC...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACAGCATGAATCCAGCTTaGTGCCGGTGGCTGGGCCTA +
Preference number: 5 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDSMNPA*CRWLGL
Trigger: TAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGGACTACAAAAGTGCTTaGAACGCGCGTGTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVDYKSA*NARVSQ
Trigger: TTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS GCA 90 bp GCCATAGTGAGCTGTCCTTTTCAGGCAGGCATTCCCAGATGCTGGTaGTCGGTTGGTCAATCTGAAGAGGGCATTTCCTGTCCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: AIVSCPFQAGIPRCW*SVGQSEEGISCPGL
Trigger: GAGACCTGGACAGGAAATGCCCTCTTCAGATTGACCAACCGAGCACCAGCATCTGGGAATGCCTGCCTGAAAAGGACAGCTCACTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS GCA 90 bp GCTATCTGTGCCATCTTGGCAAGGTCTAGAGAAGGCCTCTGCTCTTaGACTTCTTCAGGGCGCCGCCTTTTAACACCGACCTTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: AICAILARSREGLCS*TSSGRRLLTPTFLS
Trigger: CGACAAGAAGGTCGGTGTTAAAAGGCGGCGCCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGACCTTGCCAAGATGGCACAGATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS GCA 90 bp CAGTTCTGTGCCATCTTGGCAAGGTCTAGAGAAGGCCTCTGCTCTTaGACTTCTTCAGGGCGCCGCCTTTTAACACCGACCTTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: QFCAILARSREGLCS*TSSGRRLLTPTFLS
Trigger: CGACAAGAAGGTCGGTGTTAAAAGGCGGCGCCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGACCTTGCCAAGATGGCACAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS CCA 90 bp GGTGCCATAGTGAGCTGTCCTTTTCAGGCAGGCATTCCCAGATGCTaGTGCTCGGTTGGTCAATCTGAAGAGGGCATTTCCTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: GAIVSCPFQAGIPRC*CSVGQSEEGISCPG
Trigger: ACCTGGACAGGAAATGCCCTCTTCAGATTGACCAACCGAGCACCAGCATCTGGGAATGCCTGCCTGAAAAGGACAGCTCACTATGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 90 bp GGGGGCCACTTTCCTAACACCACCGAGTCCGGAGATTGTACCGTATaGAAGACTCGGAGTGTGGCCTATAGGAGGCAGAATCCCATTCAT +
Preference number: 5 (lower is better)
Translates to: GGHFPNTTESGDCTV*KTRSVAYRRQNPIH
Trigger: ATGAATGGGATTCTGCCTCCTATAGGCCACACTCCGAGTCTTCCATACGGTACAATCTCCGGACTCGGTGGTGTTAGGAAAGTGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CAA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCCACTTCCTGAAGTGTTaGCAACTCGTCCCTTTAACC +
Preference number: 5 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCHFLKC*QLVPLT
Trigger: GGTTAAAGGGACGAGTTGCAAACACTTCAGGAAGTG...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CAA 90 bp ACGCCCAGTGGTACTCCGGGGGCAAGACATGGCCATGTGCTCTCCACATTCACCGAAAAGTGTAGGTCCTaGACTCATCTTCTTTGGCGT +
Preference number: 5 (lower is better)
Translates to: TPSGTPGARHGHVLSTFTEKCRS*THLLWR
Trigger: ACGCCAAAGAAGATGAGTCAAGGACCTACACTTTTC...GGTGAATGTGGAGAGCACATGGCCATGTCTTGCCCCCGGAGTACCACTGGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS-3UTR CAA 90 bp GCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACGAGCTTAACACCGACCTTCTaGTCGTTAAGGACACACGGC +
Preference number: 5 (lower is better)
Translates to: ASGLNLQKRGVHSSMKTSLTPTF*SLRTHG
Trigger: GCCGTGTGTCCTTAACGACAAGAAGGTCGGTGTTAA...GCTCGTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp TCCAGCACCCCAGGGATTCTGTCTCTCACATTGGAATTAAGGCCAAATGGTTCTGGGCGTGGGCTTGTCTaGAGGTGGGTGATGTGCCCT +
Preference number: 5 (lower is better)
Translates to: SSTPGILSLTLELRPNGSGRGLV*RWVMCP
Trigger: AGGGCACATCACCCACCTCAAGACAAGCCCACGCCC...AGAACCATTTGGCCTTAATTCCAATGTGAGAGACAGAATCCCTGGGGTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp AGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAACACGGGAGGCCAGCATGAATCCAGCTTaGTGCCGGTGGCTGGGCCTA +
Preference number: 5 (lower is better)
Translates to: SPSFQPTDPPNFYPTREASMNPA*CRWLGL
Trigger: TAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCT...GGCCTCCCGTGTTGGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GCAGGGAGCATGAATCCAGCTTTGTGCCGGTGGCTGGGCCTACAACAGAGATGCCCCAATTGCTATTGTTaGCAGAAGACGCCACATTCG +
Preference number: 5 (lower is better)
Translates to: AGSMNPALCRWLGLQQRCPNCYC*QKTPHS
Trigger: CGAATGTGGCGTCTTCTGCAAACAATAGCAATTGGG...GCATCTCTGTTGTAGGCCCAGCCACCGGCACAAAGCTGGATTCATGCTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS GCA 90 bp CATCTTTTAAACGAGTCCAGGATCTGGAGCAAGGAGGAATCTCCCTaGCAGCCGGTGGGGACTGCTGGGAACACATATGCTAGCATGTCA +
Preference number: 5 (lower is better)
Translates to: HLLNESRIWSKEESP*QPVGTAGNTYASMS
Trigger: TGACATGCTAGCATATGTGTTCCCAGCAGTCCCCACCGGCTGGCAGGGAGATTCCTCCTTGCTCCAGATCCTGGACTCGTTTAAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CAA 90 bp AGAAGCATCTGGACTCAACCTGCAGAAGCGAGGCGTTCACTCGTCCATGAAGACCTGATGCTGAGGTCTTaGATCAGACTGGTCACAGCG +
Preference number: 5 (lower is better)
Translates to: RSIWTQPAEARRSLVHEDLMLRS*IRLVTA
Trigger: CGCTGTGACCAGTCTGATCAAAGACCTCAGCATCAG...GTCTTCATGGACGAGTGAACGCCTCGCTTCTGCAGGTTGAGTCCAGATGCTTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GACTACAAAAGTGCTTTGAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTAACACCGACCTTCTaGTCGTTAAGGACACACGGC +
Preference number: 5 (lower is better)
Translates to: DYKSALNARVSQHKGAHQLTPTF*SLRTHG
Trigger: GCCGTGTGTCCTTAACGACAAGAAGGTCGGTGTTAA...CTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGCAGTTCTGTGCCATCTaGGCAAGGTCTAGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQQFCAI*ARSREG
Trigger: GCCTTCTCTAGACCTTGCCAAGATGGCACAGAACTG...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GGTGTTACAGAAGGAAGCATCTCCCGAACCTTCCCAAGCCTGAAGCAGGGAGACGACTACAAAAGTGCTTaGAACGCGCGTGTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GVTEGSISRTFPSLKQGDDYKSA*NARVSQ
Trigger: TTGGCTGACACGCGCGTTCAAAGCACTTTTGTAGTC...GTCTCCCTGCTTCAGGCTTGGGAAGGTTCGGGAGATGCTTCCTTCTGTAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp CAAGGGCGTGGGCTTGTCTTGAGGTGGGTGATGTGCCCTGGTTACAGCCAGCAGCCACATATTGGGAACTaGAACCACCATCCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: QGRGLVLRWVMCPGYSQQPHIGN*NHHPFD
Trigger: ATCAAAAGGATGGTGGTTCAAGTTCCCAATATGTGG...CTGCTGGCTGTAACCAGGGCACATCACCCACCTCAAGACAAGCCCACGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337318.8
CDS TCA 90 bp TTTTCAGGCAGGCATTCCCAGATGCTGGTGCTCGGTTGGTCAATCTaGAGAGGGCATTTCCTGTCCAGGTCTCGCCATCTGTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: FSGRHSQMLVLGWSI*RGHFLSRSRHLSFS
Trigger: GGAAAATGACAGATGGCGAGACCTGGACAGGAAATGCCCTCTTCAGATTGACCAACCGAGCACCAGCATCTGGGAATGCCTGCCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 90 bp ACACCACCGAGTCCGGAGATTGTACCGTATGGAAGACTCGGAGTGTaGCCTATAGGAGGCAGAATCCCATTCATCAAACGCTGCAAAGAG +
Preference number: 5 (lower is better)
Translates to: TPPSPEIVPYGRLGV*PIGGRIPFIKRCKE
Trigger: CTCTTTGCAGCGTTTGATGAATGGGATTCTGCCTCCTATAGGCCACACTCCGAGTCTTCCATACGGTACAATCTCCGGACTCGGTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CAA 90 bp AGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCAACACGGGAGGCCCTTGACTCATCTTCTTaGGCGTGTGCAGTTCACGGC +
Preference number: 5 (lower is better)
Translates to: SPSFQPTDPPNFYPTREALDSSS*ACAVHG
Trigger: GCCGTGAACTGCACACGCCAAAGAAGATGAGTCAAG...GGCCTCCCGTGTTGGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS GCA 90 bp GCTTCCTCTAAGACTCAGCCACCGCCTGTAAAATGGATAACGATGTaGCTTCCTCATGGGGCTATCTGTGCCATCTTGGCAAGGTCTAGA +
Preference number: 5 (lower is better)
Translates to: ASSKTQPPPVKWITM*LPHGAICAILARSR
Trigger: TCTAGACCTTGCCAAGATGGCACAGATAGCCCCATGAGGAAGGCACATCGTTATCCATTTTACAGGCGGTGGCTGAGTCTTAGAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCGGCGCCGAGCGCTTaGTACGAGCGACTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: LGILNYICGLSSGFTGLLPAPSA*YERLPG
Trigger: CCCCGGGAGTCGCTCGTACAAAGCGCTCGGCGCCGG...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCCTTGACTCATCTTCTTaGGCGTGTGCAGTTCACGGC +
Preference number: 5 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFLDSSS*ACAVHG
Trigger: GCCGTGAACTGCACACGCCAAAGAAGATGAGTCAAG...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp ATGAGCCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCAGAGGAGCTACAAACCTaGAGAGGAGAGCAAACCCTC +
Preference number: 5 (lower is better)
Translates to: MSHLLLSQPNCYCLQKTPEELQT*RGEQTL
Trigger: GAGGGTTTGCTCTCCTCTCAAGGTTTGTAGCTCCTC...TGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GAACGCGCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGCCAGCCCAATTGCTATaGTTTGCAGAAGACGCCACA +
Preference number: 5 (lower is better)
Translates to: ERACQPTQGSAPVIFSLMPAQLL*FAEDAT
Trigger: TGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGG...CATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGCGCGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp CCTGGTATCGTGCCATCCCTACACTCACCGGAACCAACCATGCTTATCACTCAGCCTAAGCCAGCCCAATaGCTATTGTTTGCAGAAGAC +
Preference number: 5 (lower is better)
Translates to: PGIVPSLHSPEPTMLITQPKPAQ*LLFAED
Trigger: GTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGG...CTGAGTGATAAGCATGGTTGGTTCCGGTGAGTGTAGGGATGGCACGATACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GCGTGTCAGCCAACACAAGGGAGCGCACCAGTTATTTTTAGCCTTATGGGAAAACACCGAGTCCGGAGATaGTACCGTATGGAAGACTCG +
Preference number: 5 (lower is better)
Translates to: ACQPTQGSAPVIFSLMGKHRVRR*YRMEDS
Trigger: CGAGTCTTCCATACGGTACAATCTCCGGACTCGGTG...TTTTCCCATAAGGCTAAAAATAACTGGTGCGCTCCCTTGTGTTGGCTGACACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CAA 90 bp GTGGGTGATGTGCCCTGGTTACAGCCAGCAGTCCTCAAGGACAAACGGGAGGTGTCCACCATCCAACAATaGAACAAACATTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: VGDVPWLQPAVLKDKREVSTIQQ*NKHLFL
Trigger: CAGGAACAAATGTTTGTTCAATTGTTGGATGGTGGA...CACCTCCCGTTTGTCCTTGAGGACTGCTGGCTGTAACCAGGGCACATCACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CAA 90 bp CCACTTGCTCCTAAGCCAGCCCAATTGCTATTGTTTGCAGAAGACGCCACATTCGTACCTCCTGGGGAATaGATGTCAGCAGAAACAGCT +
Preference number: 5 (lower is better)
Translates to: PLAPKPAQLLLFAEDATFVPPGE*MSAETA
Trigger: AGCTGTTTCTGCTGACATCAATTCCCCAGGAGGTAC...GAATGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGGAGCAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGGAGCGGCACTGGCGCTaGCTAGGGGGTGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: LLGILNYICGLSSGFTGLERHWR*LGGAEG
Trigger: CCCCTCAGCACCCCCTAGCAAGCGCCAGTGCCGCTC...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCATTGGCCACTCACCCTaGGGGTGGGGCCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASIGHSP*GWGPSG
Trigger: CCCAGAAGGGCCCCACCCCAAGGGTGAGTGGCCAAT...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTGGTGAGGAGAGCACGTaGGCCCGGGAAGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LGILNYICGLSSGFTGLLGEEST*AREGRL
Trigger: CAGCCTCCCTTCCCGGGCCAACGTGCTCTCCTCACC...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCCCTAAGCCAGCCCAATaGCTATTGTTTGCAGAAGAC +
Preference number: 5 (lower is better)
Translates to: GEASKSVFSANRSTKFLPPKPAQ*LLFAED
Trigger: GTCTTCTGCAAACAATAGCAATTGGGCTGGCTTAGG...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS CCA 90 bp TTTGGAAGTCTGCTAATATGTTGTAAGCAGCACAAGACGCTTGCCTaGCTTCCCAGGCCAATAAACAATGCCATTCCAACTCCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: FGSLLICCKQHKTLA*LPRPINNAIPTPAA
Trigger: TGCTGCAGGAGTTGGAATGGCATTGTTTATTGGCCTGGGAAGCCAGGCAAGCGTCTTGTGCTGCTTACAACATATTAGCAGACTTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS-3UTR CAA 90 bp GGAGAGGCAAGCAAGTCCGTCTTTTCAGCCAACAGATCCACCAAATTTCTACCCGAAAAGTGTAGGTCCTaGACTCATCTTCTTTGGCGT +
Preference number: 5 (lower is better)
Translates to: GEASKSVFSANRSTKFLPEKCRS*THLLWR
Trigger: ACGCCAAAGAAGATGAGTCAAGGACCTACACTTTTC...GGGTAGAAATTTGGTGGATCTGTTGGCTGAAAAGACGGACTTGCTTGCCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTCCAGCCCAATTGCTATaGTTTGCAGAAGACGCCACA +
Preference number: 5 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLPAQLL*FAEDAT
Trigger: TGTGGCGTCTTCTGCAAACAATAGCAATTGGGCTGG...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGGCTGAGGGGTTCCCGTaGTGGTCGCTGATGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LLGILNYICGLSSGFTGLAEGFP*WSLMLR
Trigger: CCTCAGCATCAGCGACCACAACGGGAACCCCTCAGC...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCACGGGAGTCCAGACTTaGGAGCCCAAGGGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASTGVQT*EPKGLH
Trigger: ATGGAGGCCCTTGGGCTCCAAAGTCTGGACTCCCGT...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp GGCGTTCACTCGTCCATGAAGACGAGCAAAAGCAAAGTGACTACAAAAGTGCTTCCCAATTGCTATTGTTaGCAGAAGACGCCACATTCG +
Preference number: 5 (lower is better)
Translates to: GVHSSMKTSKSKVTTKVLPNCYC*QKTPHS
Trigger: CGAATGTGGCGTCTTCTGCAAACAATAGCAATTGGG...AAGCACTTTTGTAGTCACTTTGCTTTTGCTCGTCTTCATGGACGAGTGAACGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS TCA 90 bp CATCTGTCATTTTCCATAATTCCACAAGAGAAAAGTGTAGGTCCTTaGCTCATCTTCTTTGGCGTGTGCAGTTCACGGCTGAAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: HLSFSIIPQEKSVGP*LIFFGVCSSRLKVP
Trigger: TGGGACCTTCAGCCGTGAACTGCACACGCCAAAGAAGATGAGTCAAGGACCTACACTTTTCTCTTGTGGAATTATGGAAAATGACAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS-3UTR CAA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTATCGCCAGCTCTGGTGTaGAGGCAGGTGTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLSPALV*RQVCCW
Trigger: CCAACAGCACACCTGCCTCAACACCAGAGCTGGCGA...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTAGAAACAGCTCCCCATaGGCCACTCACCCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTARNSSP*ATHPWG
Trigger: ACCCCAAGGGTGAGTGGCCAATGGGGAGCTGTTTCT...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp ATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCTCTAGATGCTGGTGCTCGGTaGGTCAATCTGAAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: ILNYICGLSSGFTGLLPLDAGAR*VNLKRA
Trigger: TGCCCTCTTCAGATTGACCAACCGAGCACCAGCATC...TAGAGGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCGCTATCTGTGCCATCTaGGCAAGGTCTAGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASAICAI*ARSREG
Trigger: GCCTTCTCTAGACCTTGCCAAGATGGCACAGATAGC...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTGACTCATCTTCTTaGGCGTGTGCAGTTCACGGC +
Preference number: 5 (lower is better)
Translates to: LLGILNYICGLSSGFTGLLDSSS*ACAVHG
Trigger: GCCGTGAACTGCACACGCCAAAGAAGATGAGTCAAG...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTGATGCTGAGGTCTTaGATCAGACTGGTCACAGCG +
Preference number: 5 (lower is better)
Translates to: LLGILNYICGLSSGFTGLLMLRS*IRLVTA
Trigger: CGCTGTGACCAGTCTGATCAAAGACCTCAGCATCAG...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTGTACCTCCTGGGGAATaGATGTCAGCAGAAACAGCT +
Preference number: 5 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTAVPPGE*MSAETA
Trigger: AGCTGTTTCTGCTGACATCAATTCCCCAGGAGGTAC...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp ACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTTAACACCGACCTTCTaGTCGTTAAGGACACACGGC +
Preference number: 5 (lower is better)
Translates to: TRNFKLYMWLEFWFHWTALTPTF*SLRTHG
Trigger: GCCGTGTGTCCTTAACGACAAGAAGGTCGGTGTTAA...AGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp CTACTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCACTTCCTGAAGTGTTaGCAACTCGTCCCTTTAACC +
Preference number: 5 (lower is better)
Translates to: LLGILNYICGLSSGFTGLHFLKC*QLVPLT
Trigger: GGTTAAAGGGACGAGTTGCAAACACTTCAGGAAGTG...CAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp AGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTCCGAAAAGTGTAGGTCCTaGACTCATCTTCTTTGGCGT +
Preference number: 5 (lower is better)
Translates to: RNFKLYMWLEFWFHWTASEKCRS*THLLWR
Trigger: ACGCCAAAGAAGATGAGTCAAGGACCTACACTTTTC...GGAAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS-3UTR CAA 90 bp CTAGGAATTTTAAATTATATATGTGGCTTGAGTTCTGGTTTCACTGGACTGCTTGAGGAGGAAATCGACTaGTCACTTCCTGAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: LGILNYICGLSSGFTGLLEEEID*SLPEVF
Trigger: AAACACTTCAGGAAGTGACAAGTCGATTTCCTCCTC...AAGCAGTCCAGTGAAACCAGAACTCAAGCCACATATATAATTTAAAATTCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS GCA 72 bp GAGGCTGTTCCCAGGGGCCCCGCGGTCCCGCCAGGCTaGAGCCGGCTCCGCTCTCCTGCCACAATCCTCGTC +
Preference number: 6 (lower is better)
Translates to: EAVPRGPAVPPG*SRLRSPATILV
Trigger: GACGAGGATTGTGGCAGGAGAGCGGAGCCGGCTGCAGCCTGGCGGGACCGCGGGGCCCCTGGGAACAGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS CAA 72 bp CCGGAGGCTGAGAGCAGGGCGGTCCAGGCCCTGGTGTaGCTGACGTGGCGGGCGAAGGGGCTCTGGGGACCG +
Preference number: 6 (lower is better)
Translates to: PEAESRAVQALV*LTWRAKGLWGP
Trigger: CGGTCCCCAGAGCCCCTTCGCCCGCCACGTCAGCAACACCAGGGCCTGGACCGCCCTGCTCTCAGCCTCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS CAA 72 bp CGCCGCGCGCACGCTCGCCTGCCGGCGCCGAGCGCTTaGTACGAGCGACTCCCGGGGAGGAGGAAATCGACT +
Preference number: 6 (lower is better)
Translates to: RRAHARLPAPSA*YERLPGRRKST
Trigger: AGTCGATTTCCTCCTCCCCGGGAGTCGCTCGTACAAAGCGCTCGGCGCCGGCAGGCGAGCGTGCGCGCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280780.6
ENST00000337318.8
CDS TCA 72 bp AGGCTGAGAGCAGGGCGGTCCAGGCCCTGGTGTTGCTaGCGTGGCGGGCGAAGGGGCTCTGGGGACCGCAGT +
Preference number: 6 (lower is better)
Translates to: RLRAGRSRPWCC*RGGRRGSGDRS
Trigger: ACTGCGGTCCCCAGAGCCCCTTCGCCCGCCACGTCAGCAACACCAGGGCCTGGACCGCCCTGCTCTCAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS CCA 72 bp GCCCTGGTGTTGCTGACGTGGCGGGCGAAGGGGCTCTaGGGACCGCAGTCCTCTGTCCCTGCGCTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: ALVLLTWRAKGL*GPQSSVPALRQ
Trigger: CTGCCTGAGCGCAGGGACAGAGGACTGCGGTCCCCAGAGCCCCTTCGCCCGCCACGTCAGCAACACCAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS GCA 72 bp GCAAGGCGAGCGCGGCGGCGAAGGCGACGGCACAAATaGCCACCCCAGGATCCCAGACCCGGAATGCAAGCC +
Preference number: 6 (lower is better)
Translates to: ARRARRRRRRHK*PPQDPRPGMQA
Trigger: GGCTTGCATTCCGGGTCTGGGATCCTGGGGTGGGCATTTGTGCCGTCGCCTTCGCCGCCGCGCTCGCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS CCA 72 bp CAGGGCTGCCCTCCAAATCGGTGGTGGAGTCCTGCCTaGTCGCAGGGTGAGGAGAGCACGTTGGCCCGGGAA +
Preference number: 6 (lower is better)
Translates to: QGCPPNRWWSPA*SQGEESTLARE
Trigger: TTCCCGGGCCAACGTGCTCTCCTCACCCTGCGACCAGGCAGGACTCCACCACCGATTTGGAGGGCAGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CAA 90 bp GGGGGTGCTGAGGGGTTCCCGTTGTGGTCGCTGATGCTGAGGTCTTaGATCAGACTGGTCACAGCGCAGGCGGTCACTGCCTCCCGGTGC +
Preference number: 6 (lower is better)
Translates to: GGAEGFPLWSLMLRS*IRLVTAQAVTASRC
Trigger: GCACCGGGAGGCAGTGACCGCCTGCGCTGTGACCAGTCTGATCAAAGACCTCAGCATCAGCGACCACAACGGGAACCCCTCAGCACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS TCA 72 bp TCCAAATCGGTGGTGGAGTCCTGCCTGGTCGCAGGGTaGGGAGAGCACGTTGGCCCGGGAAGGGAGGCTGAA +
Preference number: 6 (lower is better)
Translates to: SKSVVESCLVAG*GEHVGPGREAE
Trigger: TTCAGCCTCCCTTCCCGGGCCAACGTGCTCTCCTCACCCTGCGACCAGGCAGGACTCCACCACCGATTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS GCA 72 bp TTGTTCCTGTTGAACAACCGTCAGCCTGGCTCCATCTaGACCCGCTCCTGCAAGGCGAGCGCGGCGGCGAAG +
Preference number: 6 (lower is better)
Translates to: LFLLNNRQPGSI*TRSCKASAAAK
Trigger: CTTCGCCGCCGCGCTCGCCTTGCAGGAGCGGGTGCAGATGGAGCCAGGCTGACGGTTGTTCAACAGGAACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS CAA 72 bp GGGAAAGGCCGCTGGAGCGTCTCGCCAGCTCTGGTGTaGAGGCAGGTGTGCTGTTGGCTGAGGGAGGACAGT +
Preference number: 6 (lower is better)
Translates to: GKGRWSVSPALV*RQVCCWLREDS
Trigger: ACTGTCCTCCCTCAGCCAACAGCACACCTGCCTCAACACCAGAGCTGGCGAGACGCTCCAGCGGCCTTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CAA 90 bp CGACTCCCGGGGAGGAGGAAATCGACTTGTCACTTCCTGAAGTGTTaGCAACTCGTCCCTTTAACCGGCACCGGCCAGGCCGCCCGCACC +
Preference number: 6 (lower is better)
Translates to: RLPGRRKSTCHFLKC*QLVPLTGTGQAART
Trigger: GGTGCGGGCGGCCTGGCCGGTGCCGGTTAAAGGGACGAGTTGCAAACACTTCAGGAAGTGACAAGTCGATTTCCTCCTCCCCGGGAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280780.6
ENST00000337318.8
CDS CAA 90 bp AGCGGCTGCGGGAAAGGCCGCTGGAGCGTCTCGCCAGCTCTGGTGTaGAGGCAGGTGTGCTGTTGGCTGAGGGAGGACAGTATTCCACAA +
Preference number: 6 (lower is better)
Translates to: SGCGKGRWSVSPALV*RQVCCWLREDSIPQ
Trigger: TTGTGGAATACTGTCCTCCCTCAGCCAACAGCACACCTGCCTCAACACCAGAGCTGGCGAGACGCTCCAGCGGCCTTTCCCGCAGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 72 bp CTGGACATCTCATCGGAGAAGGACAGTGAGCGGCACTaGCGCTTGCTAGGGGGTGCTGAGGGGTTCCCGTTG +
Preference number: 6 (lower is better)
Translates to: LDISSEKDSERH*RLLGGAEGFPL
Trigger: CAACGGGAACCCCTCAGCACCCCCTAGCAAGCGCCAGTGCCGCTCACTGTCCTTCTCCGATGAGATGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CAA 72 bp ATCTCATCGGAGAAGGACAGTGAGCGGCACTGGCGCTaGCTAGGGGGTGCTGAGGGGTTCCCGTTGTGGTCG +
Preference number: 6 (lower is better)
Translates to: ISSEKDSERHWR*LGGAEGFPLWS
Trigger: CGACCACAACGGGAACCCCTCAGCACCCCCTAGCAAGCGCCAGTGCCGCTCACTGTCCTTCTCCGATGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CAA 90 bp AGTGAGCGGCACTGGCGCTTGCTAGGGGGTGCTGAGGGGTTCCCGTaGTGGTCGCTGATGCTGAGGTCTTTGATCAGACTGGTCACAGCG +
Preference number: 6 (lower is better)
Translates to: SERHWRLLGGAEGFP*WSLMLRSLIRLVTA
Trigger: CGCTGTGACCAGTCTGATCAAAGACCTCAGCATCAGCGACCACAACGGGAACCCCTCAGCACCCCCTAGCAAGCGCCAGTGCCGCTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CAA 90 bp CAACTGGACATCTCATCGGAGAAGGACAGTGAGCGGCACTGGCGCTaGCTAGGGGGTGCTGAGGGGTTCCCGTTGTGGTCGCTGATGCTG +
Preference number: 6 (lower is better)
Translates to: QLDISSEKDSERHWR*LGGAEGFPLWSLML
Trigger: CAGCATCAGCGACCACAACGGGAACCCCTCAGCACCCCCTAGCAAGCGCCAGTGCCGCTCACTGTCCTTCTCCGATGAGATGTCCAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS GCA 72 bp CTGCCTGGGCCCACACCCCCTCAGTTCTTCTCTATCTaGTCAATGTCCAACTCGCCGTCCAGGGAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LPGPTPPQFFSI*SMSNSPSREQR
Trigger: CCTCTGCTCCCTGGACGGCGAGTTGGACATTGAGCAGATAGAGAAGAACTGAGGGGGTGTGGGCCCAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS CCA 72 bp TTAACACCGACCTTCTTGTCGTTAAGGACACACGGCTaGGAGCGGCTGCGGGAAAGGCCGCTGGAGCGTCTC +
Preference number: 6 (lower is better)
Translates to: LTPTFLSLRTHG*ERLRERPLERL
Trigger: GAGACGCTCCAGCGGCCTTTCCCGCAGCCGCTCCCAGCCGTGTGTCCTTAACGACAAGAAGGTCGGTGTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CAA 72 bp GAGGGGTTCCCGTTGTGGTCGCTGATGCTGAGGTCTTaGATCAGACTGGTCACAGCGCAGGCGGTCACTGCC +
Preference number: 6 (lower is better)
Translates to: EGFPLWSLMLRS*IRLVTAQAVTA
Trigger: GGCAGTGACCGCCTGCGCTGTGACCAGTCTGATCAAAGACCTCAGCATCAGCGACCACAACGGGAACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CAA 90 bp TGCTCTTGCACTTCTTCAGGGCGCCGCCTTTTAACACCGACCTTCTaGTCGTTAAGGACACACGGCTGGGAGCGGCTGCGGGAAAGGCCG +
Preference number: 6 (lower is better)
Translates to: CSCTSSGRRLLTPTF*SLRTHGWERLRERP
Trigger: CGGCCTTTCCCGCAGCCGCTCCCAGCCGTGTGTCCTTAACGACAAGAAGGTCGGTGTTAAAAGGCGGCGCCCTGAAGAAGTGCAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS GCA 72 bp CTTTGGCGTGTGCAGTTCACGGCTGAAGGTCCCACATaGAATGGAGTCAGCTCCCCGGGTGCTGAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: LWRVQFTAEGPT*NGVSSPGAEAF
Trigger: GAAAGCCTCAGCACCCGGGGAGCTGACTCCATTGCATGTGGGACCTTCAGCCGTGAACTGCACACGCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 72 bp GTCAGCAGAAACAGCTCCCCATTGGCCACTCACCCTTaGGGTGGGGCCCTTCTGGGAAATGGCCAAATGTGG +
Preference number: 6 (lower is better)
Translates to: VSRNSSPLATHP*GGALLGNGQMW
Trigger: CCACATTTGGCCATTTCCCAGAAGGGCCCCACCCCAAGGGTGAGTGGCCAATGGGGAGCTGTTTCTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 72 bp TGGCGCTTGCTAGGGGGTGCTGAGGGGTTCCCGTTGTaGTCGCTGATGCTGAGGTCTTTGATCAGACTGGTC +
Preference number: 6 (lower is better)
Translates to: WRLLGGAEGFPL*SLMLRSLIRLV
Trigger: GACCAGTCTGATCAAAGACCTCAGCATCAGCGACCACAACGGGAACCCCTCAGCACCCCCTAGCAAGCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CAA 72 bp CACTGGCGCTTGCTAGGGGGTGCTGAGGGGTTCCCGTaGTGGTCGCTGATGCTGAGGTCTTTGATCAGACTG +
Preference number: 6 (lower is better)
Translates to: HWRLLGGAEGFP*WSLMLRSLIRL
Trigger: CAGTCTGATCAAAGACCTCAGCATCAGCGACCACAACGGGAACCCCTCAGCACCCCCTAGCAAGCGCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CAA 72 bp ACTTCTTCAGGGCGCCGCCTTTTAACACCGACCTTCTaGTCGTTAAGGACACACGGCTGGGAGCGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: TSSGRRLLTPTF*SLRTHGWERLR
Trigger: CCGCAGCCGCTCCCAGCCGTGTGTCCTTAACGACAAGAAGGTCGGTGTTAAAAGGCGGCGCCCTGAAGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS TCA 72 bp CACGGGAGTCCAGACTTTGGAGCCCAAGGGCCTCCATaGTGTCCGGCAACTGGACATCTCATCGGAGAAGGA +
Preference number: 6 (lower is better)
Translates to: HGSPDFGAQGPP*CPATGHLIGEG
Trigger: TCCTTCTCCGATGAGATGTCCAGTTGCCGGACATCATGGAGGCCCTTGGGCTCCAAAGTCTGGACTCCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 72 bp CAGAAACAGCTCCCCATTGGCCACTCACCCTTGGGGTaGGGCCCTTCTGGGAAATGGCCAAATGTGGTCAAC +
Preference number: 6 (lower is better)
Translates to: QKQLPIGHSPLG*GPSGKWPNVVN
Trigger: GTTGACCACATTTGGCCATTTCCCAGAAGGGCCCCACCCCAAGGGTGAGTGGCCAATGGGGAGCTGTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 72 bp CTTTGGAGCCCAAGGGCCTCCATGATGTCCGGCAACTaGACATCTCATCGGAGAAGGACAGTGAGCGGCACT +
Preference number: 6 (lower is better)
Translates to: LWSPRASMMSGN*TSHRRRTVSGT
Trigger: AGTGCCGCTCACTGTCCTTCTCCGATGAGATGTCCAGTTGCCGGACATCATGGAGGCCCTTGGGCTCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 72 bp TGTAGCAGCGTCTCTTTTCCACGGGAGTCCAGACTTTaGAGCCCAAGGGCCTCCATGATGTCCGGCAACTGG +
Preference number: 6 (lower is better)
Translates to: CSSVSFPRESRL*SPRASMMSGNW
Trigger: CCAGTTGCCGGACATCATGGAGGCCCTTGGGCTCCAAAGTCTGGACTCCCGTGGAAAAGAGACGCTGCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS GCA 72 bp GCCATCTTGGCAAGGTCTAGAGAAGGCCTCTGCTCTTaGACTTCTTCAGGGCGCCGCCTTTTAACACCGACC +
Preference number: 6 (lower is better)
Translates to: AILARSREGLCS*TSSGRRLLTPT
Trigger: GGTCGGTGTTAAAAGGCGGCGCCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGACCTTGCCAAGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 72 bp GGATCTGGAGCAAGGAGGAATCTCCCTGCCAGCCGGTaGGGACTGCTGGGAACACATATGCTAGCATGTCAT +
Preference number: 6 (lower is better)
Translates to: GSGARRNLPASR*GLLGTHMLACH
Trigger: ATGACATGCTAGCATATGTGTTCCCAGCAGTCCCCACCGGCTGGCAGGGAGATTCCTCCTTGCTCCAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS CCA 72 bp CAAACCAGGTGGCATCTTTTAAACGAGTCCAGGATCTaGAGCAAGGAGGAATCTCCCTGCCAGCCGGTGGGG +
Preference number: 6 (lower is better)
Translates to: QTRWHLLNESRI*SKEESPCQPVG
Trigger: CCCCACCGGCTGGCAGGGAGATTCCTCCTTGCTCCAGATCCTGGACTCGTTTAAAAGATGCCACCTGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS CAA 72 bp GGGAGGAGGAAATCGACTTGTCACTTCCTGAAGTGTTaGCAACTCGTCCCTTTAACCGGCACCGGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: GRRKSTCHFLKC*QLVPLTGTGQA
Trigger: GGCCTGGCCGGTGCCGGTTAAAGGGACGAGTTGCAAACACTTCAGGAAGTGACAAGTCGATTTCCTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280780.6
ENST00000337318.8
CDS CCA 72 bp GTGAGCTGTCCTTTTCAGGCAGGCATTCCCAGATGCTaGTGCTCGGTTGGTCAATCTGAAGAGGGCATTTCC +
Preference number: 6 (lower is better)
Translates to: VSCPFQAGIPRC*CSVGQSEEGIS
Trigger: GGAAATGCCCTCTTCAGATTGACCAACCGAGCACCAGCATCTGGGAATGCCTGCCTGAAAAGGACAGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS CCA 72 bp CGATGTGCCTTCCTCATGGGGCTATCTGTGCCATCTTaGCAAGGTCTAGAGAAGGCCTCTGCTCTTGCACTT +
Preference number: 6 (lower is better)
Translates to: RCAFLMGLSVPS*QGLEKASALAL
Trigger: AAGTGCAAGAGCAGAGGCCTTCTCTAGACCTTGCCAAGATGGCACAGATAGCCCCATGAGGAAGGCACATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS CAA 72 bp ACGATGTGCCTTCCTCATGGGGCTATCTGTGCCATCTaGGCAAGGTCTAGAGAAGGCCTCTGCTCTTGCACT +
Preference number: 6 (lower is better)
Translates to: TMCLPHGAICAI*ARSREGLCSCT
Trigger: AGTGCAAGAGCAGAGGCCTTCTCTAGACCTTGCCAAGATGGCACAGATAGCCCCATGAGGAAGGCACATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS GCA 72 bp AGCTGTCCTTTTCAGGCAGGCATTCCCAGATGCTGGTaGTCGGTTGGTCAATCTGAAGAGGGCATTTCCTGT +
Preference number: 6 (lower is better)
Translates to: SCPFQAGIPRCW*SVGQSEEGISC
Trigger: ACAGGAAATGCCCTCTTCAGATTGACCAACCGAGCACCAGCATCTGGGAATGCCTGCCTGAAAAGGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280780.6
ENST00000337318.8
ENST00000392754.7
CDS GCA 72 bp ATCTGTGCCATCTTGGCAAGGTCTAGAGAAGGCCTCTaGTCTTGCACTTCTTCAGGGCGCCGCCTTTTAACA +
Preference number: 6 (lower is better)
Translates to: ICAILARSREGL*SCTSSGRRLLT
Trigger: TGTTAAAAGGCGGCGCCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGACCTTGCCAAGATGGCACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS GCA 72 bp TTCTGTGCCATCTTGGCAAGGTCTAGAGAAGGCCTCTaGTCTTGCACTTCTTCAGGGCGCCGCCTTTTAACA +
Preference number: 6 (lower is better)
Translates to: FCAILARSREGL*SCTSSGRRLLT
Trigger: TGTTAAAAGGCGGCGCCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGACCTTGCCAAGATGGCACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337318.8
ENST00000392754.7
CDS CAA 90 bp AAATGGATAACGATGTGCCTTCCTCATGGGGCTATCTGTGCCATCTaGGCAAGGTCTAGAGAAGGCCTCTGCTCTTGCACTTCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: KWITMCLPHGAICAI*ARSREGLCSCTSSG
Trigger: CCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGACCTTGCCAAGATGGCACAGATAGCCCCATGAGGAAGGCACATCGTTATCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280780.6
CDS CCA 72 bp AGTCCGGAGATTGTACCGTATGGAAGACTCGGAGTGTaGCCTATAGGAGGCAGAATCCCATTCATCAAACGC +
Preference number: 6 (lower is better)
Translates to: SPEIVPYGRLGV*PIGGRIPFIKR
Trigger: GCGTTTGATGAATGGGATTCTGCCTCCTATAGGCCACACTCCGAGTCTTCCATACGGTACAATCTCCGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS CCA 72 bp TTTCCTAACACCACCGAGTCCGGAGATTGTACCGTATaGAAGACTCGGAGTGTGGCCTATAGGAGGCAGAAT +
Preference number: 6 (lower is better)
Translates to: FPNTTESGDCTV*KTRSVAYRRQN
Trigger: ATTCTGCCTCCTATAGGCCACACTCCGAGTCTTCCATACGGTACAATCTCCGGACTCGGTGGTGTTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS CAA 90 bp TCCCTTTTCTCCACCATCCAACAATTGAACAAACATTTGTTCCTGTaGAACAACCGTCAGCCTGGCTCCATCTGCACCCGCTCCTGCAAG +
Preference number: 6 (lower is better)
Translates to: SLFSTIQQLNKHLFL*NNRQPGSICTRSCK
Trigger: CTTGCAGGAGCGGGTGCAGATGGAGCCAGGCTGACGGTTGTTCAACAGGAACAAATGTTTGTTCAATTGTTGGATGGTGGAGAAAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS CCA 72 bp CTGCTAATATGTTGTAAGCAGCACAAGACGCTTGCCTaGCTTCCCAGGCCAATAAACAATGCCATTCCAACT +
Preference number: 6 (lower is better)
Translates to: LLICCKQHKTLA*LPRPINNAIPT
Trigger: AGTTGGAATGGCATTGTTTATTGGCCTGGGAAGCCAGGCAAGCGTCTTGTGCTGCTTACAACATATTAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392754.7
CDS GCA 72 bp TGGCCTATAGGAGGCAGAATCCCATTCATCAAACGCTaGAAAGAGCTTTTCTTTGTTCACCATCGTCCTAAG +
Preference number: 6 (lower is better)
Translates to: WPIGGRIPFIKR*KELFFVHHRPK
Trigger: CTTAGGACGATGGTGAACAAAGAAAAGCTCTTTGCAGCGTTTGATGAATGGGATTCTGCCTCCTATAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392754.7