Pregenerated sensors for FAM50A (Homo sapiens)
Ensembl gene IDs: ENSG00000071859Ensembl transcript IDs: ENST00000158526.9, ENST00000393600.8, ENST00000464419.5, ENST00000478509.1, ENST00000481619.5, ENST00000490480.1, ENST00000494278.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTCCTCCCAGCGTGCCTGGCATGGTCGCAGGGGAGCGGGTGCCTaGAGTCCCGGTGACACCACGGGGCACACTGAGGGAGCTGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SSSQRAWHGRRGAGA*SPGDTTGHTEGAEE Trigger: CTCCTCAGCTCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCTGCGACCATGCCAGGCACGCTGGGAGGAGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| 3UTR GCA 90 bp | AGAATAAAGCAGTCACTGATGTGGCAGGGGCAGGACACGAGCAGCTaGCGTCCTCCTCCCAGCGTGCCTGGCATGGTCGCAGGGGAGCGG | + |
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Preference number: 1 (lower is better) Translates to: RIKQSLMWQGQDTSS*RPPPSVPGMVAGER Trigger: CCGCTCCCCTGCGACCATGCCAGGCACGCTGGGAGGAGGACGGCAGCTGCTCGTGTCCTGCCCCTGCCACATCAGTGACTGCTTTATTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| 3UTR CCA 90 bp | TCTCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTaGAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCAGGACACG | + |
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Preference number: 1 (lower is better) Translates to: SHNAGAPALTRALLY*KRIKQSLMWQGQDT Trigger: CGTGTCCTGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| 3UTR-3UTR CCA 90 bp | TCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATTCCTCCCAGCGTGCCTaGCATGGTCGCAGGGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: SQCRRSSSDTCTSLLEKNSSQRA*HGRRGA Trigger: CGCTCCCCTGCGACCATGCCAGGCACGCTGGGAGGA...ATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTGATGAGGGGAGCGGGTGCCTaGAGTCCCGGTGACACCACG | + |
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Preference number: 2 (lower is better) Translates to: PALTRALLYWKRIKQSLMRGAGA*SPGDTT Trigger: CGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCT...CATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| 3UTR CAA 90 bp | TTCTCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATaGGAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: FSQCRRSSSDTCTSL*EKNKAVTDVAGAGH Trigger: GTGTCCTGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| 3UTR CCA 72 bp | GGACACGAGCAGCTGCCGTCCTCCTCCCAGCGTGCCTaGCATGGTCGCAGGGGAGCGGGTGCCTGGAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: GHEQLPSSSQRA*HGRRGAGAWSP Trigger: GGGACTCCAGGCACCCGCTCCCCTGCGACCATGCCAGGCACGCTGGGAGGAGGACGGCAGCTGCTCGTGTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| 3UTR CCA 72 bp | CAGCGTGCCTGGCATGGTCGCAGGGGAGCGGGTGCCTaGAGTCCCGGTGACACCACGGGGCACACTGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: QRAWHGRRGAGA*SPGDTTGHTEG Trigger: TCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCTGCGACCATGCCAGGCACGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| 3UTR GCA 72 bp | CAGTCACTGATGTGGCAGGGGCAGGACACGAGCAGCTaGCGTCCTCCTCCCAGCGTGCCTGGCATGGTCGCA | + |
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Preference number: 3 (lower is better) Translates to: QSLMWQGQDTSS*RPPPSVPGMVA Trigger: TGCGACCATGCCAGGCACGCTGGGAGGAGGACGGCAGCTGCTCGTGTCCTGCCCCTGCCACATCAGTGACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| 3UTR GCA 72 bp | GGTTTCTCACAATGCAGGCGCTCCAGCTCTGACACGTaGACTTCTTTATTGGAAAAGAATAAAGCAGTCACT | + |
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Preference number: 3 (lower is better) Translates to: GFSQCRRSSSDT*TSLLEKNKAVT Trigger: AGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGAGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | GTCCCGGTGACACCACGGGGCACACTGAGGGAGCTGAGGAGCCGGGGCCGCGCACAGGACACGAGCAGCTaGCGTCCTCCTCCCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: VPVTPRGTLRELRSRGRAQDTSS*RPPPSV Trigger: CACGCTGGGAGGAGGACGGCAGCTGCTCGTGTCCTG...TGCGCGGCCCCGGCTCCTCAGCTCCCTCAGTGTGCCCCGTGGTGTCACCGGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CCA 90 bp | GCAGGGGAGCGGGTGCCTGGAGTCCCGGTGACACCACGGGGCACACTGAGGGAGAGGGGAGCGGGTGCCTaGAGTCCCGGTGACACCACG | + |
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Preference number: 4 (lower is better) Translates to: AGERVPGVPVTPRGTLRERGAGA*SPGDTT Trigger: CGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCT...CTCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGAGTCCCGGTGACACCACGGGGCACACTGAGGGAGCTGAGGAGCCGGGGTCCTCCCAGCGTGCCTaGCATGGTCGCAGGGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: AWSPGDTTGHTEGAEEPGSSQRA*HGRRGA Trigger: CGCTCCCCTGCGACCATGCCAGGCACGCTGGGAGGA...CCCCGGCTCCTCAGCTCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | GCAGGGGAGCGGGTGCCTGGAGTCCCGGTGACACCACGGGGCACACTGAGGGAGGCGCAGCCTCCTGGATaGTCAGCGGATCGTGTACTT | + |
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Preference number: 4 (lower is better) Translates to: AGERVPGVPVTPRGTLREAQPPG*SADRVL Trigger: AAGTACACGATCCGCTGAGCATCCAGGAGGCTGCGC...CTCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CCA 90 bp | TCCTCCCAGCGTGCCTGGCATGGTCGCAGGGGAGCGGGTGCCTGGAGTCCCGGTAAGCAGTCACTGATGTaGCAGGGGCAGGACACGAGC | + |
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Preference number: 4 (lower is better) Translates to: SSQRAWHGRRGAGAWSPGKQSLM*QGQDTS Trigger: GCTCGTGTCCTGCCCCTGCCACATCAGTGACTGCTT...ACCGGGACTCCAGGCACCCGCTCCCCTGCGACCATGCCAGGCACGCTGGGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | TGGAGTCCCGGTGACACCACGGGGCACACTGAGGGAGCTGAGGAGCCGGGGCCGATCTCGAGCGCCTTCTaGAGGAACTGCTGCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: WSPGDTTGHTEGAEEPGPISSAF*RNCCMV Trigger: CACCATGCAGCAGTTCCTGCAGAAGGCGCTCGAGAT...CGGCCCCGGCTCCTCAGCTCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGTCCCGGTGACACCACGGGGCACACTGAGGGAGCTGAGGAGCCGGGGTCCACTCTTCCCCCGTaGCTTGGTGACGATGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: AWSPGDTTGHTEGAEEPGSTLPP*LGDDEV Trigger: GACTTCATCGTCACCAAGGCACGGGGGAAGAGTGGA...CCCCGGCTCCTCAGCTCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | GTCGCAGGGGAGCGGGTGCCTGGAGTCCCGGTGACACCACGGGGCACACTGAGGTGTTCTCCTCCGCGATaGGCTGCTTCATCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VAGERVPGVPVTPRGTLRCSPPR*AASSAP Trigger: TGGAGCAGATGAAGCAGCGCATCGCGGAGGAGAACA...CCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCTGCGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR TCA 90 bp | GCAGGGGAGCGGGTGCCTGGAGTCCCGGTGACACCACGGGGCACACTGAGGGAGCAGGCGCTCCAGCTCTaGCACGTGCACTTCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: AGERVPGVPVTPRGTLREQALQL*HVHFFI Trigger: AATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTG...CTCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR TCA 90 bp | GAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCAGGACACGAGCAGCTGCCGGCGGCGCCCTTGTATTaGGCCATGGCAGCGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: EKNKAVTDVAGAGHEQLPAAPLY*AMAAAA Trigger: CGCCGCCGCTGCCATGGCTCAATACAAGGGCGCCGC...CGGCAGCTGCTCGTGTCCTGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR TCA 90 bp | GCAGGGGAGCGGGTGCCTGGAGTCCCGGTGACACCACGGGGCACACTGAGGGAGCAATGTTGGATTTCATaGTGTTCTCCTCCGCGATGC | + |
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Preference number: 4 (lower is better) Translates to: AGERVPGVPVTPRGTLREQCWIS*CSPPRC Trigger: GCATCGCGGAGGAGAACATCATGAAATCCAACATTG...CTCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR TCA 90 bp | GTCGCAGGGGAGCGGGTGCCTGGAGTCCCGGTGACACCACGGGGCACACTGAGGCATGAACATCAAAGTTaGAGAGTGGTCCACTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VAGERVPGVPVTPRGTLRHEHQS*RVVHSS Trigger: GGAAGAGTGGACCACTCTTCAACTTTGATGTTCATG...CCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCTGCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CCA 90 bp | GCAGGACACGAGCAGCTGCCGTCCTCCTCCCAGCGTGCCTGGCATGGTCGCAGGGCTTGTGTCAACGTCTaGGTTCTTCCCCAGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: AGHEQLPSSSQRAWHGRRACVNV*VLPQFS Trigger: AGAAAACTGGGGAAGAACCCAGACGTTGACACAAGC...CCTGCGACCATGCCAGGCACGCTGGGAGGAGGACGGCAGCTGCTCGTGTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | AATAAAGCAGTCACTGATGTGGCAGGGGCAGGACACGAGCAGCTGCCGTCCTCCTTCATCTGCTCCATCTaGTCGCGCTGCTTCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: NKAVTDVAGAGHEQLPSSFICSI*SRCFSR Trigger: GCGGGAGAAGCAGCGCGAGCAGATGGAGCAGATGAA...GGAGGACGGCAGCTGCTCGTGTCCTGCCCCTGCCACATCAGTGACTGCTTTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR TCA 90 bp | AATAAAGCAGTCACTGATGTGGCAGGGGCAGGACACGAGCAGCTGCCGTCCTCCCGGACCTCAGCTCACTaGAGTCTTTCCGAAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: NKAVTDVAGAGHEQLPSSRTSAH*SLSEGS Trigger: AGATCCTTCGGAAAGACTTCAGTGAGCTGAGGTCCG...GGAGGACGGCAGCTGCTCGTGTCCTGCCCCTGCCACATCAGTGACTGCTTTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | GAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCAGGACACGAGCAGCTGCCGTCCATCTGCTCGCGCTaGTTCTCCCGCTTCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: EKNKAVTDVAGAGHEQLPSICSR*FSRFFI Trigger: GATGAAGAAGCGGGAGAAGCAGCGCGAGCAGATGGA...CGGCAGCTGCTCGTGTCCTGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | CGTGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCAGCGCTTCTTCATCAGGTaGATGGCGCGGCCGGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: RALLYWKRIKQSLMWQGQRFFIR*MARPAS Trigger: CGAGGCCGGCCGCGCCATGCACCTGATGAAGAAGCG...CTGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CCA 90 bp | TGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCAGGACCTTGTATTGAGCCATaGCAGCGGCGGCGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: CTSLLEKNKAVTDVAGAGPCIEP*QRRRRR Trigger: CCGCCGCCGCCGCCGCTGCCATGGCTCAATACAAGG...TCCTGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CCA 90 bp | CACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATATCTTCATCAGGTGCATaGCGCGGCCGGCCTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: HNAGAPALTRALLYWKRISSSGA*RGRPRS Trigger: CGAGCGAGGCCGGCCGCGCCATGCACCTGATGAAGA...TATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTGATGCCAGCGTGCCTGGCATaGTCGCAGGGGAGCGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PALTRALLYWKRIKQSLMPACLA*SQGSGC Trigger: GCACCCGCTCCCCTGCGACCATGCCAGGCACGCTGG...CATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | GGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATAAAGCAGTCAGCTGGACTTGAGCTCTaGCTCCACCGCGTCGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: GAPALTRALLYWKRIKQSAGLEL*LHRVVV Trigger: CACTACGACGCGGTGGAGGCAGAGCTCAAGTCCAGC...TGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | TCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATTTGGCTTCCCACTCCTaGCGCAGCTCTTCCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SQCRRSSSDTCTSLLEKNLASHS*RSSSRS Trigger: GCTTCGGGAAGAGCTGCGGCAGGAGTGGGAAGCCAA...ATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | TCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATGAGCTGCTCCACCCCTaGGGACCTCAGCTCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: SQCRRSSSDTCTSLLEKNELLHP*GPQLTE Trigger: TTCAGTGAGCTGAGGTCCGCAGGGGTGGAGCAGCTC...ATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | GTTTCTCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAATCCTCCGCGATGCGCTaGTTCATCTGCTCCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: VSHNAGAPALTRALLYWKSSAMR*FICSIC Trigger: GCAGATGGAGCAGATGAAGCAGCGCATCGCGGAGGA...TTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGAGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR TCA 90 bp | TGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCAGGACTTCCTCCTCCAGGGTaGAGGACAGGCTGGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: CTSLLEKNKAVTDVAGAGLPPPG*RTGWRS Trigger: AGATCTCCAGCCTGTCCTTCACCCTGGAGGAGGAAG...TCCTGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR TCA 90 bp | ACGTGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCACCACAGTGGCGTCACTaGGCAACCGCACATCGTCAT | + |
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Preference number: 4 (lower is better) Translates to: TCTSLLEKNKAVTDVAGAPQWRH*ATAHRH Trigger: ATGACGATGTGCGGTTGCTCAGTGACGCCACTGTGG...TGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | GGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACAGCACCACCTTGCCTaGATGGGACTCATCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GAPALTRALLYWKRIKQSQHHLA*MGLILL Trigger: GAGAAGGATGAGTCCCATGCAGGCAAGGTGGTGCTG...TGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | TCTCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGATTCACCAGAGCCTCCTaGTTGGCCTTCATGTCATTC | + |
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Preference number: 4 (lower is better) Translates to: SHNAGAPALTRALLYWKRFTRAS*LAFMSF Trigger: GAATGACATGAAGGCCAAGCAGGAGGCTCTGGTGAA...TCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | CGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTTTGATGTACATGAGCTaGTCCACCCCTGCGGACCTC | + |
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Preference number: 4 (lower is better) Translates to: RSSSDTCTSLLEKNKAVTLMYMS*STPADL Trigger: GAGGTCCGCAGGGGTGGAGCAGCTCATGTACATCAA...AGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | ACGTGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCATCCTCAGCACCACCTTaGCTGCATGGGACTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: TCTSLLEKNKAVTDVAGASSAPP*LHGTHP Trigger: AGGATGAGTCCCATGCAGGCAAGGTGGTGCTGAGGA...TGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | CGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTTTCTCCAGCTTCATCTaGAGCTCCTTGGACTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RSSSDTCTSLLEKNKAVTFSSFI*SSLDCS Trigger: GGAGCAGTCCAAGGAGCTGCAGATGAAGCTGGAGAA...AGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR TCA 90 bp | ACGTGCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCACGATCTCCTCACTCTTaGTCTTCTCCTGCTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TCTSLLEKNKAVTDVAGARSPHS*SSPAWL Trigger: AAGCCAAGCAGGAGAAGATCAAGAGTGAGGAGATCG...TGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CCA 90 bp | AATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATAAAGATCAAAGTTGAAGAGTaGTCCACTCTTCCCCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: NAGAPALTRALLYWKRIKIKVEE*STLPPC Trigger: GCACGGGGGAAGAGTGGACCACTCTTCAACTTTGAT...CTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR TCA 90 bp | CACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATAAACCGCACATCGTCATaGACATCAAAGTTGAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: HNAGAPALTRALLYWKRINRTSS*TSKLKS Trigger: ACTCTTCAACTTTGATGTTCATGACGATGTGCGGTT...TATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR GCA 90 bp | AATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATAAAGTCCAGCTCTGACACGTaGACTTCTTTATTGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: NAGAPALTRALLYWKRIKSSSDT*TSLLEK Trigger: CTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGA...CTTTATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS TCA 90 bp | ATCAGGTGCATGGCGCGGCCGGCCTCGCTCGCGGCGCCCTTGTATTaGGCCATGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: IRCMARPASLAAPLY*AMAAAAAAAAAAGG Trigger: GCCGCCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCATGGCTCAATACAAGGGCGCCGCGAGCGAGGCCGGCCGCGCCATGCACCTGAT 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393600.8 ENST00000464419.5 |
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| CDS GCA 90 bp | GACGCTGGGTGCCCAGGCGAGGCGACGAGAGGCCCGTCCCCGCCGTaGCTCCCAACAGAAACACTGGCTCGGCTCCCTCCTGCCGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DAGCPGEATRGPSPP*LPTETLARLPPAGG Trigger: GCCTCCGGCAGGAGGGAGCCGAGCCAGTGTTTCTGTTGGGAGGCACGGCGGGGACGGGCCTCTCGTCGCCTCGCCTGGGCACCCAGCGTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158526.9 |
||
| CDS CCA 90 bp | AGGCGACGAGAGGCCCGTCCCCGCCGTGCCTCCCAACAGAAACACTaGCTCGGCTCCCTCCTGCCGGAGGCCGGTCATCAGCTAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRREARPRRASQQKH*LGSLLPEAGHQLVA Trigger: GGCCACTAGCTGATGACCGGCCTCCGGCAGGAGGGAGCCGAGCCAGTGTTTCTGTTGGGAGGCACGGCGGGGACGGGCCTCTCGTCGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158526.9 |
||
| CDS GCA 90 bp | GCCCAATGTCCCGCTGCTGCCCCAGTGACAACATCGGCGGCAAGGTaGTATGGGGGCGGCTGGGTCGGCGGCACTCACCACTCTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AQCPAAAPVTTSAAR*YGGGWVGGTHHSSP Trigger: GGGGGAAGAGTGGTGAGTGCCGCCGACCCAGCCGCCCCCATAGCACCTTGCCGCCGATGTTGTCACTGGGGCAGCAGCGGGACATTGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494278.1 |
||
| CDS CCA 90 bp | CTGCCTCACAGGTGCAAGGGGTTCTGGAAGGAGCCTCCTGGCCAGTaGACTTGCCAGGTCTGGCTCAGGCCTCCCCGCCTCTCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPHRCKGFWKEPPGQ*TCQVWLRPPRLSRG Trigger: CCCCCTGGAGAGGCGGGGAGGCCTGAGCCAGACCTGGCAAGTCCACTGGCCAGGAGGCTCCTTCCAGAACCCCTTGCACCTGTGAGGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158526.9 |
||
| CDS CCA 90 bp | TGGCACCCGGGAGGGTCGTGCCTGCCTCACAGGTGCAAGGGGTTCTaGAAGGAGCCTCCTGGCCAGTGGACTTGCCAGGTCTGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WHPGGSCLPHRCKGF*KEPPGQWTCQVWLR Trigger: CCTGAGCCAGACCTGGCAAGTCCACTGGCCAGGAGGCTCCTTCCAGAACCCCTTGCACCTGTGAGGCAGGCACGACCCTCCCGGGTGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158526.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGAGCGGGTGCCTGGAGTCCCGGTGACACCACGGGGCACACTGAGGGAGTTGCCCTTTCTCATCTaGACTGTCCGCCGGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGERVPGVPVTPRGTLRELPFLI*TVRRCP Trigger: TGGGCACCGGCGGACAGTCAAGATGAGAAAGGGCAA...CTCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGCACCCGCTCCCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CAA 90 bp | GCCTGGAGTCCCGGTGACACCACGGGGCACACTGAGGGAGCTGAGGAGCCGGGGTCGATCTCCTCACTCTaGATCTTCTCCTGCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AWSPGDTTGHTEGAEEPGSISSL*IFSCLA Trigger: AGCCAAGCAGGAGAAGATCAAGAGTGAGGAGATCGA...CCCCGGCTCCTCAGCTCCCTCAGTGTGCCCCGTGGTGTCACCGGGACTCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
||
| CDS CCA 90 bp | CCAAGTCAGGAAGGTCAGTTCCTTCCCACGGAACCTGAGGGAGGCTaGGCCCATGGTGAGCAGGAAGCAGGCTGCACGCTGCCTACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSQEGQFLPTEPEGG*AHGEQEAGCTLPTL Trigger: CAAGGTAGGCAGCGTGCAGCCTGCTTCCTGCTCACCATGGGCCCAGCCTCCCTCAGGTTCCGTGGGAAGGAACTGACCTTCCTGACTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478509.1 ENST00000481619.5 |
||
| CDS CCA 90 bp | CCAGACAGGGGGCCAGGCCCTGGAGCCAGTTATCCTCAGGATCCCTaGGGCTTCCCAAGTCAGGAAGGTCAGTTCCTTCCCACGGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: PDRGPGPGASYPQDP*GFPSQEGQFLPTEP Trigger: AGGTTCCGTGGGAAGGAACTGACCTTCCTGACTTGGGAAGCCCCAGGGATCCTGAGGATAACTGGCTCCAGGGCCTGGCCCCCTGTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478509.1 |
||
| CDS-3UTR CAA 90 bp | GCAGGACACGAGCAGCTGCCGTCCTCCTCCCAGCGTGCCTGGCATGGTCGCAGGGATCAGGCAAGAAGCTaGTGTCAACGTCTGGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGHEQLPSSSQRAWHGRRDQARS*CQRLGS Trigger: AGAACCCAGACGTTGACACAAGCTTCTTGCCTGATC...CCTGCGACCATGCCAGGCACGCTGGGAGGAGGACGGCAGCTGCTCGTGTCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393600.8 |
||
| CDS TCA 90 bp | CCGCCTCCTCTTCCTCCTCGCCTCCCTCTTCTTCCTCCTCCAGGGTaGAGGACAGGCTGGAGATCTTCCGCTTGGCTTCCTTCTTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPPLPPRLPLLPPPG*RTGWRSSAWLPSYA Trigger: AGCGTAAGAAGGAAGCCAAGCGGAAGATCTCCAGCCTGTCCTTCACCCTGGAGGAGGAAGAAGAGGGAGGCGAGGAGGAAGAGGAGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000158526.9 ENST00000393600.8 ENST00000464419.5 ENST00000478509.1 ENST00000481619.5 |
||
| CDS GCA 90 bp | TCCAGCTTCATCTGCAGCTCCTTGGACTGCTCCTTCTTGGCCAGCTaGTTCTCCCGCTCCTTCACCAGAGCCTCCTGCTTGGCCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SSFICSSLDCSFLAS*FSRSFTRASCLAFM Trigger: CATGAAGGCCAAGCAGGAGGCTCTGGTGAAGGAGCGGGAGAAGCAGCTGGCCAAGAAGGAGCAGTCCAAGGAGCTGCAGATGAAGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000158526.9 ENST00000393600.8 ENST00000464419.5 ENST00000481619.5 |
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| CDS GCA 90 bp | GAGCAACCGCACATCGTCATGAACATCAAAGTTGAAGAGTGGTCCTaGAGGGGAGAAGTGACAGCCCAATGTCCCGCTGCTGCCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EQPHIVMNIKVEEWS*RGEVTAQCPAAAPV Trigger: CACTGGGGCAGCAGCGGGACATTGGGCTGTCACTTCTCCCCTGCAGGACCACTCTTCAACTTTGATGTTCATGACGATGTGCGGTTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494278.1 |
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| CDS GCA 90 bp | GAAATGGCAGGCTGGCCATCAAGGACCTGCGTTATAGTCCAAATCTaGCCCTGTGCCCTTGTCGATGGAAGGTTCCATGAGGCTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EMAGWPSRTCVIVQI*PCALVDGRFHEAGQ Trigger: CTGCCCAGCCTCATGGAACCTTCCATCGACAAGGGCACAGGGGCAGATTTGGACTATAACGCAGGTCCTTGATGGCCAGCCTGCCATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490480.1 |
||
| CDS GCA 90 bp | GAACCACCCCTCACTGTGGAAATGGCAGGCTGGCCATCAAGGACCTaGGTTATAGTCCAAATCTGCCCCTGTGCCCTTGTCGATGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPPLTVEMAGWPSRT*VIVQICPCALVDGR Trigger: CCTTCCATCGACAAGGGCACAGGGGCAGATTTGGACTATAACGCAGGTCCTTGATGGCCAGCCTGCCATTTCCACAGTGAGGGGTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490480.1 |
||
| CDS-3UTR CAA 90 bp | GCACTTCTTTATTGGAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCAGGACCGCGGCGCCCTTGTATaGAGCCATGGCAGCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLYWKRIKQSLMWQGQDRGALV*SHGSGG Trigger: GCCGCCGCTGCCATGGCTCAATACAAGGGCGCCGCG...GTCCTGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTCCAATAAAGAAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS CCA 90 bp | GTCACTGAGCAACCGCACATCGTCATGAACATCAAAGTTGAAGAGTaGTCCTGCAGGGGAGAAGTGACAGCCCAATGTCCCGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VTEQPHIVMNIKVEE*SCRGEVTAQCPAAA Trigger: GGCAGCAGCGGGACATTGGGCTGTCACTTCTCCCCTGCAGGACCACTCTTCAACTTTGATGTTCATGACGATGTGCGGTTGCTCAGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494278.1 |
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| CDS TCA 90 bp | CCGCGTCGTAGTGCGCAGAGAACTTCTTGTCAATGTTGGATTTCATaGTGTTCTCCTGCGGGGAGTGACAGCCACCATGAGAACCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRRSAQRTSCQCWIS*CSPAGSDSHHENHP Trigger: GGGGTGGTTCTCATGGTGGCTGTCACTCCCCGCAGGAGAACATCATGAAATCCAACATTGACAAGAAGTTCTCTGCGCACTACGACGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490480.1 |
||
| CDS TCA 90 bp | TCATCCTTCTCCACAGTGGCGTCACTGAGCAACCGCACATCGTCATaGACATCAAAGTTGAAGAGTGGTCCACTCTTCCCCCGTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSFSTVASLSNRTSS*TSKLKSGPLFPRAL Trigger: CAAGGCACGGGGGAAGAGTGGACCACTCTTCAACTTTGATGTTCATGACGATGTGCGGTTGCTCAGTGACGCCACTGTGGAGAAGGATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000158526.9 ENST00000393600.8 ENST00000464419.5 |
||
| CDS-3UTR CAA 90 bp | GTTTCTCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAATTGATCTTCTCCTGCTaGGCTTCCCACTCCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VSHNAGAPALTRALLYWKLIFSC*ASHSCR Trigger: GCGGCAGGAGTGGGAAGCCAAGCAGGAGAAGATCAA...TTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGAGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393600.8 |
||
| CDS-3UTR CAA 90 bp | TCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATCTCCTCAGCACCACCTaGCCTGCATGGGACTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SQCRRSSSDTCTSLLEKNLLSTT*PAWDSS Trigger: GGATGAGTCCCATGCAGGCAAGGTGGTGCTGAGGAG...ATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGACTGGAGATCTTCCGCTaGGCTTCCTTCTTACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHNAGAPALTRALLYWKRLEIFR*ASFLRS Trigger: GGAGCGTAAGAAGGAAGCCAAGCGGAAGATCTCCAG...TCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CAA 90 bp | TCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGAATTTCATCTGCAGCTCCTaGGACTGCTCCTTCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQCRRSSSDTCTSLLEKNFICSS*DCSFLA Trigger: GGCCAAGAAGGAGCAGTCCAAGGAGCTGCAGATGAA...ATTCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CAA 90 bp | GAAAAGAATAAAGCAGTCACTGATGTGGCAGGGGCAGGACACGAGCAGCTGCCGAACTTCTTGTCAATGTaGGATTTCATGATGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKNKAVTDVAGAGHEQLPNFLSM*DFMMFS Trigger: GGAGAACATCATGAAATCCAACATTGACAAGAAGTT...CGGCAGCTGCTCGTGTCCTGCCCCTGCCACATCAGTGACTGCTTTATTCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CAA 90 bp | TCTCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAAGATGCGCAGAGAACTTCTaGTCAATGTTGGATTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SHNAGAPALTRALLYWKRCAENF*SMLDFM Trigger: CATGAAATCCAACATTGACAAGAAGTTCTCTGCGCA...TCTTTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS-3UTR CAA 90 bp | GTTTCTCACAATGCAGGCGCTCCAGCTCTGACACGTGCACTTCTTTATTGGAAAACGTGCACTTCTTTATaGGAAAAGAATAAAGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSHNAGAPALTRALLYWKTCTSL*EKNKAV Trigger: GACTGCTTTATTCTTTTCCAATAAAGAAGTGCACGT...TTTCCAATAAAGAAGTGCACGTGTCAGAGCTGGAGCGCCTGCATTGTGAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393600.8 |
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| CDS GCA 72 bp | GGCCTCCCCGCCTCTCCAGGGGGAGACGAACCGCCCTaGCCGGTGTCCATAGGACCAGGGCAGAGGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLPASPGGDEPP*PVSIGPGQRPG Trigger: GCCAGGCCTCTGCCCTGGTCCTATGGACACCGGGCAGGGCGGTTCGTCTCCCCCTGGAGAGGCGGGGAGGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000158526.9 |
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| CDS GCA 72 bp | TGCCCAGGCGAGGCGACGAGAGGCCCGTCCCCGCCGTaGCTCCCAACAGAAACACTGGCTCGGCTCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CPGEATRGPSPP*LPTETLARLPP Trigger: AGGAGGGAGCCGAGCCAGTGTTTCTGTTGGGAGGCACGGCGGGGACGGGCCTCTCGTCGCCTCGCCTGGGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158526.9 |
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| CDS GCA 72 bp | CCCGCTGCTGCCCCAGTGACAACATCGGCGGCAAGGTaGTATGGGGGCGGCTGGGTCGGCGGCACTCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: PAAAPVTTSAAR*YGGGWVGGTHH Trigger: GTGGTGAGTGCCGCCGACCCAGCCGCCCCCATAGCACCTTGCCGCCGATGTTGTCACTGGGGCAGCAGCGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494278.1 |
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| CDS CCA 72 bp | GAGGCCCGTCCCCGCCGTGCCTCCCAACAGAAACACTaGCTCGGCTCCCTCCTGCCGGAGGCCGGTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: EARPRRASQQKH*LGSLLPEAGHQ Trigger: CTGATGACCGGCCTCCGGCAGGAGGGAGCCGAGCCAGTGTTTCTGTTGGGAGGCACGGCGGGGACGGGCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158526.9 |
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| CDS CCA 72 bp | GCTCGCGCTGCTTCTCCCGCTTCTTCATCAGGTGCATaGCGCGGCCGGCCTCGCTCGCGGCGCCCTTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: ARAASPASSSGA*RGRPRSRRPCI Trigger: AATACAAGGGCGCCGCGAGCGAGGCCGGCCGCGCCATGCACCTGATGAAGAAGCGGGAGAAGCAGCGCGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393600.8 ENST00000464419.5 |
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| CDS CCA 72 bp | GTGACAACATCGGCGGCAAGGTGCTATGGGGGCGGCTaGGTCGGCGGCACTCACCACTCTTCCCCCGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VTTSAARCYGGG*VGGTHHSSPVP Trigger: AGGCACGGGGGAAGAGTGGTGAGTGCCGCCGACCCAGCCGCCCCCATAGCACCTTGCCGCCGATGTTGTCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000494278.1 |
||
| CDS CCA 72 bp | TGCTGCCCCAGTGACAACATCGGCGGCAAGGTGCTATaGGGGCGGCTGGGTCGGCGGCACTCACCACTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CCPSDNIGGKVL*GRLGRRHSPLF Trigger: GAAGAGTGGTGAGTGCCGCCGACCCAGCCGCCCCCATAGCACCTTGCCGCCGATGTTGTCACTGGGGCAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494278.1 |
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| CDS CAA 72 bp | CAAGGGGTTCTGGAAGGAGCCTCCTGGCCAGTGGACTaGCCAGGTCTGGCTCAGGCCTCCCCGCCTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QGVLEGASWPVD*PGLAQASPPLQ Trigger: CTGGAGAGGCGGGGAGGCCTGAGCCAGACCTGGCAAGTCCACTGGCCAGGAGGCTCCTTCCAGAACCCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158526.9 |
||
| CDS GCA 72 bp | AAGCAGTGGGTGAACCGCTGGCACCCGGGAGGGTCGTaGCTGCCTCACAGGTGCAAGGGGTTCTGGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KQWVNRWHPGGS*LPHRCKGFWKE Trigger: CTCCTTCCAGAACCCCTTGCACCTGTGAGGCAGGCACGACCCTCCCGGGTGCCAGCGGTTCACCCACTGCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158526.9 |
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| CDS TCA 72 bp | ATGGTGAGCAGGAAGCAGGCTGCACGCTGCCTACCTTaGCTGTCCGCCGGTGCCCAGAGCCATCCCAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: MVSRKQAARCLP*LSAGAQSHPSS Trigger: GCTACTGGGATGGCTCTGGGCACCGGCGGACAGTCAAGGTAGGCAGCGTGCAGCCTGCTTCCTGCTCACCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478509.1 ENST00000481619.5 |
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| CDS CAA 90 bp | AACGCCCGGCTCCAGGCCCATTTCACAGATGAGACTGTCGCTGGCTaGCTTCTGTGTGCCCTGCTGGAAGTCAGCGAGCCAGGGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NARLQAHFTDETVAG*LLCALLEVSEPGAC Trigger: GCAGGCCCCTGGCTCGCTGACTTCCAGCAGGGCACACAGAAGCAAGCCAGCGACAGTCTCATCTGTGAAATGGGCCTGGAGCCGGGCGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158526.9 |
||
| CDS CCA 72 bp | GGGCCAGGCCCTGGAGCCAGTTATCCTCAGGATCCCTaGGGCTTCCCAAGTCAGGAAGGTCAGTTCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPGPGASYPQDP*GFPSQEGQFLP Trigger: GGGAAGGAACTGACCTTCCTGACTTGGGAAGCCCCAGGGATCCTGAGGATAACTGGCTCCAGGGCCTGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478509.1 |
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| CDS TCA 72 bp | CTCGGAGAACGCCCGGCTCCAGGCCCATTTCACAGATaGGACTGTCGCTGGCTTGCTTCTGTGTGCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGERPAPGPFHR*DCRWLASVCPA Trigger: AGCAGGGCACACAGAAGCAAGCCAGCGACAGTCTCATCTGTGAAATGGGCCTGGAGCCGGGCGTTCTCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158526.9 |
||
| CDS TCA 72 bp | AATGTTGGATTTCATGATGTTCTCGGAAGCAGTGGGTaGACCGCTGGCACCCGGGAGGGTCGTGCCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: NVGFHDVLGSSG*TAGTREGRACL Trigger: GAGGCAGGCACGACCCTCCCGGGTGCCAGCGGTTCACCCACTGCTTCCGAGAACATCATGAAATCCAACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158526.9 |
||
| CDS CCA 72 bp | GGGAGTGACAGCCACCATGAGAACCACCCCTCACTGTaGAAATGGCAGGCTGGCCATCAAGGACCTGCGTTA | + |
|
Preference number: 6 (lower is better) Translates to: GSDSHHENHPSL*KWQAGHQGPAL Trigger: TAACGCAGGTCCTTGATGGCCAGCCTGCCATTTCCACAGTGAGGGGTGGTTCTCATGGTGGCTGTCACTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490480.1 |
||
| CDS CAA 72 bp | CTCCAGGCCCATTTCACAGATGAGACTGTCGCTGGCTaGCTTCTGTGTGCCCTGCTGGAAGTCAGCGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LQAHFTDETVAG*LLCALLEVSEP Trigger: TGGCTCGCTGACTTCCAGCAGGGCACACAGAAGCAAGCCAGCGACAGTCTCATCTGTGAAATGGGCCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158526.9 |
||
| CDS GCA 72 bp | AAGGTGATCTCGATCTCCTCACTCTTGATCTTCTCCTaGTTGGCTTCCCACTCCTGCCGCAGCTCTTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: KVISISSLLIFS*LASHSCRSSSR Trigger: TCGGGAAGAGCTGCGGCAGGAGTGGGAAGCCAAGCAGGAGAAGATCAAGAGTGAGGAGATCGAGATCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000158526.9 ENST00000393600.8 ENST00000464419.5 ENST00000478509.1 ENST00000481619.5 |
||
| CDS GCA 72 bp | GGCTGGCCATCAAGGACCTGCGTTATAGTCCAAATCTaGCCCTGTGCCCTTGTCGATGGAAGGTTCCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GWPSRTCVIVQI*PCALVDGRFHE Trigger: CTCATGGAACCTTCCATCGACAAGGGCACAGGGGCAGATTTGGACTATAACGCAGGTCCTTGATGGCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490480.1 |
||
| CDS GCA 72 bp | CTCACTGTGGAAATGGCAGGCTGGCCATCAAGGACCTaGGTTATAGTCCAAATCTGCCCCTGTGCCCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LTVEMAGWPSRT*VIVQICPCALV Trigger: GACAAGGGCACAGGGGCAGATTTGGACTATAACGCAGGTCCTTGATGGCCAGCCTGCCATTTCCACAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490480.1 |
||
| CDS TCA 72 bp | TCCACAGTGGCGTCACTGAGCAACCGCACATCGTCATaGACATCAAAGTTGAAGAGTGGTCCTGCAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: STVASLSNRTSS*TSKLKSGPAGE Trigger: CTCCCCTGCAGGACCACTCTTCAACTTTGATGTTCATGACGATGTGCGGTTGCTCAGTGACGCCACTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494278.1 |
||
| CDS TCA 72 bp | TCCACAGTGGCGTCACTGAGCAACCGCACATCGTCATaGACATCAAAGTTGAAGAGTGGTCCACTCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: STVASLSNRTSS*TSKLKSGPLFP Trigger: GGGGAAGAGTGGACCACTCTTCAACTTTGATGTTCATGACGATGTGCGGTTGCTCAGTGACGCCACTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000158526.9 ENST00000393600.8 ENST00000464419.5 |
||
| CDS GCA 72 bp | CACATCGTCATGAACATCAAAGTTGAAGAGTGGTCCTaGAGGGGAGAAGTGACAGCCCAATGTCCCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HIVMNIKVEEWS*RGEVTAQCPAA Trigger: AGCAGCGGGACATTGGGCTGTCACTTCTCCCCTGCAGGACCACTCTTCAACTTTGATGTTCATGACGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494278.1 |
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| CDS CCA 72 bp | CAACCGCACATCGTCATGAACATCAAAGTTGAAGAGTaGTCCTGCAGGGGAGAAGTGACAGCCCAATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: QPHIVMNIKVEE*SCRGEVTAQCP Trigger: GGGACATTGGGCTGTCACTTCTCCCCTGCAGGACCACTCTTCAACTTTGATGTTCATGACGATGTGCGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494278.1 |
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| CDS TCA 72 bp | AGTGCGCAGAGAACTTCTTGTCAATGTTGGATTTCATaGTGTTCTCCTGCGGGGAGTGACAGCCACCATGAG | + |
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Preference number: 6 (lower is better) Translates to: SAQRTSCQCWIS*CSPAGSDSHHE Trigger: CTCATGGTGGCTGTCACTCCCCGCAGGAGAACATCATGAAATCCAACATTGACAAGAAGTTCTCTGCGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490480.1 |
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