RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM47E (Homo sapiens)

Ensembl gene IDs: ENSG00000189157

Ensembl transcript IDs: ENST00000424749.7, ENST00000502320.2, ENST00000510197.5, ENST00000510328.5, ENST00000511946.1, ENST00000512895.5, ENST00000515589.1, ENST00000606246.1, ENST00000606550.1

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGCCAATCCGCCTGGGAACAGAGAGCCCCGTTGCATTGCGGGCTaGTGGCCAGATCCTGCAATAGCCAGTGTGTCAGGCATGCTTCCT +
Preference number: 1 (lower is better)
Translates to: PANPPGNREPRCIAG*WPDPAIASVSGMLP
Trigger: AGGAAGCATGCCTGACACACTGGCTATTGCAGGATCTGGCCAGCAGCCCGCAATGCAACGGGGCTCTCTGTTCCCAGGCGGATTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 90 bp TTCTCAACCTGCCAATCCGCCTGGGAACAGAGAGCCCCGTTGCATTaGGGGCTGCTGGCCAGATCCTGCAATAGCCAGTGTGTCAGGCAT +
Preference number: 1 (lower is better)
Translates to: FSTCQSAWEQRAPLH*GLLARSCNSQCVRH
Trigger: ATGCCTGACACACTGGCTATTGCAGGATCTGGCCAGCAGCCCGCAATGCAACGGGGCTCTCTGTTCCCAGGCGGATTGGCAGGTTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 90 bp GCCAATCCGCCTGGGAACAGAGAGCCCCGTTGCATTGCGGGCTGCTaGCCAGATCCTGCAATAGCCAGTGTGTCAGGCATGCTTCCTTTT +
Preference number: 1 (lower is better)
Translates to: ANPPGNREPRCIAGC*PDPAIASVSGMLPF
Trigger: AAAAGGAAGCATGCCTGACACACTGGCTATTGCAGGATCTGGCCAGCAGCCCGCAATGCAACGGGGCTCTCTGTTCCCAGGCGGATTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 90 bp TTATCAGCTATGACTTCAGCCCCAGATGCCTATCTAGTCTCCTGCTaGAGTGACAGGGCTGATCTGGGCACACTGCTCGAGGCAGCAGGC +
Preference number: 1 (lower is better)
Translates to: LSAMTSAPDAYLVSC*SDRADLGTLLEAAG
Trigger: GCCTGCTGCCTCGAGCAGTGTGCCCAGATCAGCCCTGTCACTGCAGCAGGAGACTAGATAGGCATCTGGGGCTGAAGTCATAGCTGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR TCA 90 bp AACGAGCCAACAGCGCATGATGTGCTTCCCCCTGCAGACAGCCTATaGACGGACGTGCAGTCAGGGAGGTTGCACATCACCAACATTCCT +
Preference number: 1 (lower is better)
Translates to: NEPTAHDVLPPADSL*TDVQSGRLHITNIP
Trigger: AGGAATGTTGGTGATGTGCAACCTCCCTGACTGCACGTCCGTTCATAGGCTGTCTGCAGGGGGAAGCACATCATGCGCTGTTGGCTCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 90 bp ACATTATCAGCTATGACTTCAGCCCCAGATGCCTATCTAGTCTCCTaGTGCAGTGACAGGGCTGATCTGGGCACACTGCTCGAGGCAGCA +
Preference number: 1 (lower is better)
Translates to: TLSAMTSAPDAYLVS*CSDRADLGTLLEAA
Trigger: TGCTGCCTCGAGCAGTGTGCCCAGATCAGCCCTGTCACTGCAGCAGGAGACTAGATAGGCATCTGGGGCTGAAGTCATAGCTGATAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 90 bp GGACCCAGCTTTCACTATCTTGTGTGTGTCTATTATTTCTCAACCTaGCAATCCGCCTGGGAACAGAGAGCCCCGTTGCATTGCGGGCTG +
Preference number: 1 (lower is better)
Translates to: GPSFHYLVCVYYFST*QSAWEQRAPLHCGL
Trigger: CAGCCCGCAATGCAACGGGGCTCTCTGTTCCCAGGCGGATTGGCAGGTTGAGAAATAATAGACACACACAAGATAGTGAAAGCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 90 bp GTCTCTTACCAGTACCCCACAGTGCCTGCGTCTTGTAAACTGGGGTaGCACAGCCTGGTGGTGCCACCTATAGTCGATAATGTAAATCAT +
Preference number: 1 (lower is better)
Translates to: VSYQYPTVPASCKLG*HSLVVPPIVDNVNH
Trigger: ATGATTTACATTATCGACTATAGGTGGCACCACCAGGCTGTGGCACCCCAGTTTACAAGACGCAGGCACTGTGGGGTACTGGTAAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 90 bp GTTACAAGTGATTGTCCAAAGGGGGACCACATTGTGTGGAGATGCTaGGGCCAGCTTTACAAGTTAGTGAGGGGAAACCAGGAGGCAGAA +
Preference number: 1 (lower is better)
Translates to: VTSDCPKGDHIVWRC*GQLYKLVRGNQEAE
Trigger: TTCTGCCTCCTGGTTTCCCCTCACTAACTTGTAAAGCTGGCCCCAGCATCTCCACACAATGTGGTCCCCCTTTGGACAATCACTTGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 90 bp TTCTTCCAGGGGCCTGTCTTGGTATGTGCCTGTAAGAGAACTATTTaGGTTTGTCAGGGTCATAACCTCTTCCCGTCAACAACTGTGAGC +
Preference number: 1 (lower is better)
Translates to: FFQGPVLVCACKRTI*VCQGHNLFPSTTVS
Trigger: GCTCACAGTTGTTGACGGGAAGAGGTTATGACCCTGACAAACCCAAATAGTTCTCTTACAGGCACATACCAAGACAGGCCCCTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 90 bp AACTTAATAATAAATGCTGGTATATCCAGTGCATTGTTGGCACCGTaGGACCAGAAGGCGGTGACACCCCTGGACCCAGCTTTCACTATC +
Preference number: 1 (lower is better)
Translates to: NLIINAGISSALLAP*DQKAVTPLDPAFTI
Trigger: GATAGTGAAAGCTGGGTCCAGGGGTGTCACCGCCTTCTGGTCCCACGGTGCCAACAATGCACTGGATATACCAGCATTTATTATTAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 90 bp TGTTGGTCTTTGGAAGGTAGTCACACAGTATCAGAAACACTCAGATaGAATTCACACTTGTTCTGTGCCCAAGTCTGGCCCAGCCCAGCT +
Preference number: 1 (lower is better)
Translates to: CWSLEGSHTVSETLR*NSHLFCAQVWPSPA
Trigger: AGCTGGGCTGGGCCAGACTTGGGCACAGAACAAGTGTGAATTCCATCTGAGTGTTTCTGATACTGTGTGACTACCTTCCAAAGACCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR TCA 90 bp AGGACGCAAAGGAGACTTGAAAACATCCTAGAGAATTCAGGGTGTTaGGTAACAGTTGGAATTTGCAAGGCCCATGCCCTGTACATAGAC +
Preference number: 1 (lower is better)
Translates to: RTQRRLENILENSGC*VTVGICKAHALYID
Trigger: GTCTATGTACAGGGCATGGGCCTTGCAAATTCCAACTGTTACTCAACACCCTGAATTCTCTAGGATGTTTTCAAGTCTCCTTTGCGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR TCA 90 bp CCAAGCCACAGCTCTTTGTCCTTAGACCAGGACGCAAAGGAGACTTaGAAACATCCTAGAGAATTCAGGGTGTTGAGTAACAGTTGGAAT +
Preference number: 1 (lower is better)
Translates to: PSHSSLSLDQDAKET*KHPREFRVLSNSWN
Trigger: ATTCCAACTGTTACTCAACACCCTGAATTCTCTAGGATGTTTTCAAGTCTCCTTTGCGTCCTGGTCTAAGGACAAAGAGCTGTGGCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 90 bp GCACACCCTTGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACAGTaGTTAACCTTTGTCCCTTTCCTCTCAGACAGATCCTGCAACTCA +
Preference number: 1 (lower is better)
Translates to: AHPCCECLLLCNIKQ*LTFVPFLSDRSCNS
Trigger: TGAGTTGCAGGATCTGTCTGAGAGGAAAGGGACAAAGGTTAAGCACTGTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR TCA 90 bp TCTATTCTGGGCACTGAGGTGGTCGTACCAAGTCACACCACCCTTTaGACAATTATCCTTGGAATAAATTGTTCCAAGAATGGTGGAATA +
Preference number: 1 (lower is better)
Translates to: SILGTEVVVPSHTTL*TIILGINCSKNGGI
Trigger: TATTCCACCATTCTTGGAACAATTTATTCCAAGGATAATTGTTCAAAGGGTGGTGTGACTTGGTACGACCACCTCAGTGCCCAGAATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR TCA 90 bp GGAGTTTCCCAGTCTCAAATCTCCATCTCATGCTCTAGACTTGCCTaGTTTAACTTTGAAACCAGTCTGATTCTGAACTTTGTCCTACAT +
Preference number: 1 (lower is better)
Translates to: GVSQSQISISCSRLA*FNFETSLILNFVLH
Trigger: ATGTAGGACAAAGTTCAGAATCAGACTGGTTTCAAAGTTAAATCAGGCAAGTCTAGAGCATGAGATGGAGATTTGAGACTGGGAAACTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 90 bp CACCACCCTTTGAACAATTATCCTTGGAATAAATTGTTCCAAGAATaGTGGAATAGCATGAGTAGCTGTCCAATCTTTAGAGATGTCATG +
Preference number: 1 (lower is better)
Translates to: HHPLNNYPWNKLFQE*WNSMSSCPIFRDVM
Trigger: CATGACATCTCTAAAGATTGGACAGCTACTCATGCTATTCCACCATTCTTGGAACAATTTATTCCAAGGATAATTGTTCAAAGGGTGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR TCA 90 bp ACAATTATCCTTGGAATAAATTGTTCCAAGAATGGTGGAATAGCATaGGTAGCTGTCCAATCTTTAGAGATGTCATGTCTACCACAAAGC +
Preference number: 1 (lower is better)
Translates to: TIILGINCSKNGGIA*VAVQSLEMSCLPQS
Trigger: GCTTTGTGGTAGACATGACATCTCTAAAGATTGGACAGCTACTCATGCTATTCCACCATTCTTGGAACAATTTATTCCAAGGATAATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR GCA 90 bp ATCAAACAGTGCTTAACCTTTGTCCCTTTCCTCTCAGACAGATCCTaGAACTCAAATGAATTGCCTAAAAGAAATTTCCTGGTTGAAATT +
Preference number: 1 (lower is better)
Translates to: IKQCLTFVPFLSDRS*NSNELPKRNFLVEI
Trigger: AATTTCAACCAGGAAATTTCTTTTAGGCAATTCATTTGAGTTGCAGGATCTGTCTGAGAGGAAAGGGACAAAGGTTAAGCACTGTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 90 bp CACCCTTTGAACAATTATCCTTGGAATAAATTGTTCCAAGAATGGTaGAATAGCATGAGTAGCTGTCCAATCTTTAGAGATGTCATGTCT +
Preference number: 1 (lower is better)
Translates to: HPLNNYPWNKLFQEW*NSMSSCPIFRDVMS
Trigger: AGACATGACATCTCTAAAGATTGGACAGCTACTCATGCTATTCCACCATTCTTGGAACAATTTATTCCAAGGATAATTGTTCAAAGGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR GCA 90 bp ACGATTCTTCTATGCTTGAGTTCGTTTTATAGGAGTCTTATTACATaGACGTTTACATTCCTTCCCGATATACATATTCTCAAGGAACTA +
Preference number: 1 (lower is better)
Translates to: TILLCLSSFYRSLIT*TFTFLPDIHILKEL
Trigger: TAGTTCCTTGAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAACGAACTCAAGCATAGAAGAATCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 90 bp TTTACTTTCTCAAAGTGTTTTCACGTCTGTTATCTAGGAGAAGTTTaGGGTCTGTTGAAAAAGAGAAGAGGTTTGCAAATATCCTCATTA +
Preference number: 1 (lower is better)
Translates to: FTFSKCFHVCYLGEV*GLLKKRRGLQISSL
Trigger: TAATGAGGATATTTGCAAACCTCTTCTCTTTTTCAACAGACCCCAAACTTCTCCTAGATAACAGACGTGAAAACACTTTGAGAAAGTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CCA 90 bp GAAACACTCAGATGGAATTCACACTTGTTCTGTGCCCAAGTCTGGCCCAGCCCACTGCGTCTTGTAAACTaGGGTGCCACAGCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: ETLRWNSHLFCAQVWPSPLRLVN*GATAWW
Trigger: CCACCAGGCTGTGGCACCCCAGTTTACAAGACGCAG...TGGGCTGGGCCAGACTTGGGCACAGAACAAGTGTGAATTCCATCTGAGTGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CCA 90 bp GAAACACTCAGATGGAATTCACACTTGTTCTGTGCCCAAGTCTGGCCCAGCCCAGGGGACCACATTGTGTaGAGATGCTGGGGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: ETLRWNSHLFCAQVWPSPGDHIV*RCWGQL
Trigger: AAGCTGGCCCCAGCATCTCCACACAATGTGGTCCCC...TGGGCTGGGCCAGACTTGGGCACAGAACAAGTGTGAATTCCATCTGAGTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 90 bp TGGGACCAGAAGGCGGTGACACCCCTGGACCCAGCTTTCACTATCTaGTGTGTGTCTATTATTTCTCAACCTGCCAATCCGCCTGGGAAC +
Preference number: 2 (lower is better)
Translates to: WDQKAVTPLDPAFTI*CVSIISQPANPPGN
Trigger: GTTCCCAGGCGGATTGGCAGGTTGAGAAATAATAGACACACACAAGATAGTGAAAGCTGGGTCCAGGGGTGTCACCGCCTTCTGGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 90 bp CCGCCCTCACTAAACTTAATAATAAATGCTGGTATATCCAGTGCATaGTTGGCACCGTGGGACCAGAAGGCGGTGACACCCCTGGACCCA +
Preference number: 2 (lower is better)
Translates to: PPSLNLIINAGISSA*LAPWDQKAVTPLDP
Trigger: TGGGTCCAGGGGTGTCACCGCCTTCTGGTCCCACGGTGCCAACAATGCACTGGATATACCAGCATTTATTATTAAGTTTAGTGAGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CCA 90 bp GAAACACTCAGATGGAATTCACACTTGTTCTGTGCCCAAGTCTGGCCCAGCCCAAAGACAATGCCAGGTTaGGCTGCCAGAACGAGCCAA +
Preference number: 2 (lower is better)
Translates to: ETLRWNSHLFCAQVWPSPKTMPG*AARTSQ
Trigger: TTGGCTCGTTCTGGCAGCCCAACCTGGCATTGTCTT...TGGGCTGGGCCAGACTTGGGCACAGAACAAGTGTGAATTCCATCTGAGTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 90 bp TCCTTGCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTaGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGGCAGATG +
Preference number: 2 (lower is better)
Translates to: SLLNSICKVEGFQEP*YYAAESGSVGGWQM
Trigger: CATCTGCCACCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR CAA 90 bp CCCTCACTAAACTTAATAATAAATGCTGGTATATCCAGTGCATTGTaGGCACCGTGGGACCAGAAGGCGGTGACACCCCTGGACCCAGCT +
Preference number: 2 (lower is better)
Translates to: PSLNLIINAGISSAL*APWDQKAVTPLDPA
Trigger: AGCTGGGTCCAGGGGTGTCACCGCCTTCTGGTCCCACGGTGCCAACAATGCACTGGATATACCAGCATTTATTATTAAGTTTAGTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR TCA 90 bp GCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCGTGGCAGATGCACTGTaGTCATCTGAAGCTCAGATG +
Preference number: 2 (lower is better)
Translates to: AEFNMQGGGLSGAFVLRRVADAL*SSEAQM
Trigger: CATCTGAGCTTCAGATGATCACAGTGCATCTGCCAC...GCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR-3UTR TCA 90 bp TCTTGTGTGTGTCTATTATTTCTCAACCTGCCAATCCGCCTGGGAACAGAGAGCGTGGCAGATGCACTGTaGTCATCTGAAGCTCAGATG +
Preference number: 2 (lower is better)
Translates to: SCVCLLFLNLPIRLGTESVADAL*SSEAQM
Trigger: CATCTGAGCTTCAGATGATCACAGTGCATCTGCCAC...GCTCTCTGTTCCCAGGCGGATTGGCAGGTTGAGAAATAATAGACACACACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CCA 90 bp CTCCTGTTTCCATGGATTGTTTGTAACCAGCTTTTGTGGCAACTGTTACTGTTGTTACGCCGCAGAGTCTaGTTCAGTAGGAGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: LLFPWIVCNQLLWQLLLLLRRRV*FSRRVA
Trigger: TGCCACCCTCCTACTGAACCAGACTCTGCGGCGTAA...CAACAGTAACAGTTGCCACAAAAGCTGGTTACAAACAATCCATGGAAACAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CCA 90 bp GAAACACTCAGATGGAATTCACACTTGTTCTGTGCCCAAGTCTGGCCCAGCCCACCTTCTGAGAATTTCTaGTCTAACTGGTTGTCTAGC +
Preference number: 2 (lower is better)
Translates to: ETLRWNSHLFCAQVWPSPPSENF*SNWLSS
Trigger: GCTAGACAACCAGTTAGACCAGAAATTCTCAGAAGG...TGGGCTGGGCCAGACTTGGGCACAGAACAAGTGTGAATTCCATCTGAGTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CCA 90 bp ACAGTGGACAAATGCTTGACATTATCAGCTATGACTTCAGCCCCAGATGCCTATGGTTCAGTAGGAGGGTaGCAGATGCACTGTGATCAT +
Preference number: 2 (lower is better)
Translates to: TVDKCLTLSAMTSAPDAYGSVGG*QMHCDH
Trigger: ATGATCACAGTGCATCTGCCACCCTCCTACTGAACC...ATAGGCATCTGGGGCTGAAGTCATAGCTGATAATGTCAAGCATTTGTCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CCA 90 bp GTAGCTGTCCAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCAGGTTCAGTAGGAGGGTaGCAGATGCACTGTGATCAT +
Preference number: 2 (lower is better)
Translates to: VAVQSLEMSCLPQSQEIPGSVGG*QMHCDH
Trigger: ATGATCACAGTGCATCTGCCACCCTCCTACTGAACC...TGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTGGACAGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR-3UTR CCA 90 bp TCTTGTGTGTGTCTATTATTTCTCAACCTGCCAATCCGCCTGGGAACAGAGAGCATTCAATATGCAAGGTaGAGGGCTTTCAGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: SCVCLLFLNLPIRLGTESIQYAR*RAFRSL
Trigger: AAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAAT...GCTCTCTGTTCCCAGGCGGATTGGCAGGTTGAGAAATAATAGACACACACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR GCA 90 bp GGCATACTCCCTTCTGAGAATTTCTGGTCTAACTGGTTGTCTAGCTTCACCTCCTGCAATATCAAACAGTaGTTAACCTTTGTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: GILPSENFWSNWLSSFTSCNIKQ*LTFVPF
Trigger: GAAAGGGACAAAGGTTAAGCACTGTTTGATATTGCA...GGAGGTGAAGCTAGACAACCAGTTAGACCAGAAATTCTCAGAAGGGAGTATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR GCA 90 bp TCTTGTGTGTGTCTATTATTTCTCAACCTGCCAATCCGCCTGGGAACAGAGAGCACAATTCCATTGTTATaGATCCTCCCTGTGTCTAAA +
Preference number: 2 (lower is better)
Translates to: SCVCLLFLNLPIRLGTESTIPLL*ILPVSK
Trigger: TTTAGACACAGGGAGGATGCATAACAATGGAATTGT...GCTCTCTGTTCCCAGGCGGATTGGCAGGTTGAGAAATAATAGACACACACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 90 bp GATGAAATGCTCCTGATTATTGTAAATACAAAATTGCATGCAGGATaGTGTAAAGACAATGCCAGGTTGGGCTGCCAGAACGAGCCAACA +
Preference number: 2 (lower is better)
Translates to: DEMLLIIVNTKLHAG*CKDNARLGCQNEPT
Trigger: TGTTGGCTCGTTCTGGCAGCCCAACCTGGCATTGTCTTTACACAATCCTGCATGCAATTTTGTATTTACAATAATCAGGAGCATTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR TCA 90 bp ACAGTGGACAAATGCTTGACATTATCAGCTATGACTTCAGCCCCAGATGCCTATAATGGTGGAATAGCATaGGTAGCTGTCCAATCTTTA +
Preference number: 2 (lower is better)
Translates to: TVDKCLTLSAMTSAPDAYNGGIA*VAVQSL
Trigger: TAAAGATTGGACAGCTACTCATGCTATTCCACCATT...ATAGGCATCTGGGGCTGAAGTCATAGCTGATAATGTCAAGCATTTGTCCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR TCA 90 bp GAGTACCCACATTTGAAGAAAGGGGTCAGCCATCAGAAGCTTGATTTCATATTTCTTTTACACAAGCAATaGGCAGGCAGGGTTTATCTG +
Preference number: 2 (lower is better)
Translates to: EYPHLKKGVSHQKLDFIFLLHKQ*AGRVYL
Trigger: CAGATAAACCCTGCCTGCTCATTGCTTGTGTAAAAG...AAATATGAAATCAAGCTTCTGATGGCTGACCCCTTTCTTCAAATGTGGGTACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR TCA 90 bp GTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACTTGCCAAGTCAAAGTTaGACATCCACAGTGGGACAC +
Preference number: 2 (lower is better)
Translates to: VKLEHTLVVSVCCFAISNLPSQS*TSTVGH
Trigger: GTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAA...GTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 90 bp CGTACCAAGTCACACCACCCTTTGAACAATTATCCTTGGAATAAATaGTTCCAAGAATGGTGGAATAGCATGAGTAGCTGTCCAATCTTT +
Preference number: 2 (lower is better)
Translates to: RTKSHHPLNNYPWNK*FQEWWNSMSSCPIF
Trigger: AAAGATTGGACAGCTACTCATGCTATTCCACCATTCTTGGAACAATTTATTCCAAGGATAATTGTTCAAAGGGTGGTGTGACTTGGTACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR-3UTR CCA 90 bp CTCCTGTTTCCATGGATTGTTTGTAACCAGCTTTTGTGGCAACTGTTACTGTTGTATCTAGGAGAAGTTTaGGGTCTGTTGAAAAAGAGA +
Preference number: 2 (lower is better)
Translates to: LLFPWIVCNQLLWQLLLLYLGEV*GLLKKR
Trigger: TCTCTTTTTCAACAGACCCCAAACTTCTCCTAGATA...CAACAGTAACAGTTGCCACAAAAGCTGGTTACAAACAATCCATGGAAACAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 90 bp GGGTTTATCTGTAGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTaGTTGCTTTGCAATATCAAACAGTGCTTAACCTTTGTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: GFICSKIRAHPCCEC*LLCNIKQCLTFVPF
Trigger: GAAAGGGACAAAGGTTAAGCACTGTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTACTACAGATAAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 90 bp TTTATCTGTAGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTaGCTTTGCAATATCAAACAGTGCTTAACCTTTGTCCCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: FICSKIRAHPCCECL*LCNIKQCLTFVPFL
Trigger: GAGGAAAGGGACAAAGGTTAAGCACTGTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTACTACAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 90 bp TGTTATCTAGGAGAAGTTTGGGGTCTGTTGAAAAAGAGAAGAGGTTaGCAAATATCCTCATTAGAGTACTATGCAAGTGTTGCATCACTA +
Preference number: 2 (lower is better)
Translates to: CYLGEVWGLLKKRRG*QISSLEYYASVASL
Trigger: TAGTGATGCAACACTTGCATAGTACTCTAATGAGGATATTTGCAAACCTCTTCTCTTTTTCAACAGACCCCAAACTTCTCCTAGATAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR GCA 90 bp TGTTCAAAGCTAAAGGAGTTCCTCCAAACCAGTTCTATAATGGAGTTTCCCAGTCTCATTAGAGTACTATaGAAGTGTTGCATCACTATT +
Preference number: 2 (lower is better)
Translates to: CSKLKEFLQTSSIMEFPSLIRVL*KCCITI
Trigger: AATAGTGATGCAACACTTGCATAGTACTCTAATGAG...ACTGGGAAACTCCATTATAGAACTGGTTTGGAGGAACTCCTTTAGCTTTGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp TCTCCTGCTGCAGTGACAGGGCTGATCTGGGCACACTaGTCGAGGCAGCAGGCCCTCCCGCTCCATGTTCCC +
Preference number: 3 (lower is better)
Translates to: SPAAVTGLIWAH*SRQQALPLHVP
Trigger: GGGAACATGGAGCGGGAGGGCCTGCTGCCTCGAGCAGTGTGCCCAGATCAGCCCTGTCACTGCAGCAGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp CAACCTGCCAATCCGCCTGGGAACAGAGAGCCCCGTTaGATTGCGGGCTGCTGGCCAGATCCTGCAATAGCC +
Preference number: 3 (lower is better)
Translates to: QPANPPGNREPR*IAGCWPDPAIA
Trigger: GGCTATTGCAGGATCTGGCCAGCAGCCCGCAATGCAACGGGGCTCTCTGTTCCCAGGCGGATTGGCAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp TGCCAATCCGCCTGGGAACAGAGAGCCCCGTTGCATTaGGGGCTGCTGGCCAGATCCTGCAATAGCCAGTGT +
Preference number: 3 (lower is better)
Translates to: CQSAWEQRAPLH*GLLARSCNSQC
Trigger: ACACTGGCTATTGCAGGATCTGGCCAGCAGCCCGCAATGCAACGGGGCTCTCTGTTCCCAGGCGGATTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR TCA 72 bp TGCCAGGTTGGGCTGCCAGAACGAGCCAACAGCGCATaGTGTGCTTCCCCCTGCAGACAGCCTATGAACGGA +
Preference number: 3 (lower is better)
Translates to: CQVGLPERANSA*CASPCRQPMNG
Trigger: TCCGTTCATAGGCTGTCTGCAGGGGGAAGCACATCATGCGCTGTTGGCTCGTTCTGGCAGCCCAACCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR TCA 72 bp ACAGCGCATGATGTGCTTCCCCCTGCAGACAGCCTATaGACGGACGTGCAGTCAGGGAGGTTGCACATCACC +
Preference number: 3 (lower is better)
Translates to: TAHDVLPPADSL*TDVQSGRLHIT
Trigger: GGTGATGTGCAACCTCCCTGACTGCACGTCCGTTCATAGGCTGTCTGCAGGGGGAAGCACATCATGCGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp AGAGCCCCGTTGCATTGCGGGCTGCTGGCCAGATCCTaGAATAGCCAGTGTGTCAGGCATGCTTCCTTTTGC +
Preference number: 3 (lower is better)
Translates to: RAPLHCGLLARS*NSQCVRHASFC
Trigger: GCAAAAGGAAGCATGCCTGACACACTGGCTATTGCAGGATCTGGCCAGCAGCCCGCAATGCAACGGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp ATGACTTCAGCCCCAGATGCCTATCTAGTCTCCTGCTaGAGTGACAGGGCTGATCTGGGCACACTGCTCGAG +
Preference number: 3 (lower is better)
Translates to: MTSAPDAYLVSC*SDRADLGTLLE
Trigger: CTCGAGCAGTGTGCCCAGATCAGCCCTGTCACTGCAGCAGGAGACTAGATAGGCATCTGGGGCTGAAGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp GCTATGACTTCAGCCCCAGATGCCTATCTAGTCTCCTaGTGCAGTGACAGGGCTGATCTGGGCACACTGCTC +
Preference number: 3 (lower is better)
Translates to: AMTSAPDAYLVS*CSDRADLGTLL
Trigger: GAGCAGTGTGCCCAGATCAGCCCTGTCACTGCAGCAGGAGACTAGATAGGCATCTGGGGCTGAAGTCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp CAGTACCCCACAGTGCCTGCGTCTTGTAAACTGGGGTaGCACAGCCTGGTGGTGCCACCTATAGTCGATAAT +
Preference number: 3 (lower is better)
Translates to: QYPTVPASCKLG*HSLVVPPIVDN
Trigger: ATTATCGACTATAGGTGGCACCACCAGGCTGTGGCACCCCAGTTTACAAGACGCAGGCACTGTGGGGTACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 72 bp ATAAATGCTGGTATATCCAGTGCATTGTTGGCACCGTaGGACCAGAAGGCGGTGACACCCCTGGACCCAGCT +
Preference number: 3 (lower is better)
Translates to: INAGISSALLAP*DQKAVTPLDPA
Trigger: AGCTGGGTCCAGGGGTGTCACCGCCTTCTGGTCCCACGGTGCCAACAATGCACTGGATATACCAGCATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp CATGCAGGATTGTGTAAAGACAATGCCAGGTTGGGCTaGCAGAACGAGCCAACAGCGCATGATGTGCTTCCC +
Preference number: 3 (lower is better)
Translates to: HAGLCKDNARLG*QNEPTAHDVLP
Trigger: GGGAAGCACATCATGCGCTGTTGGCTCGTTCTGGCAGCCCAACCTGGCATTGTCTTTACACAATCCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 72 bp GATTGTCCAAAGGGGGACCACATTGTGTGGAGATGCTaGGGCCAGCTTTACAAGTTAGTGAGGGGAAACCAG +
Preference number: 3 (lower is better)
Translates to: DCPKGDHIVWRC*GQLYKLVRGNQ
Trigger: CTGGTTTCCCCTCACTAACTTGTAAAGCTGGCCCCAGCATCTCCACACAATGTGGTCCCCCTTTGGACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp CAGACAGCCTATGAACGGACGTGCAGTCAGGGAGGTTaGACATCACCAACATTCCTATCCCAGAAAAGCAGA +
Preference number: 3 (lower is better)
Translates to: QTAYERTCSQGG*TSPTFLSQKSR
Trigger: TCTGCTTTTCTGGGATAGGAATGTTGGTGATGTGCAACCTCCCTGACTGCACGTCCGTTCATAGGCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 72 bp TTGGGATCCATCCGTGCAGCAGAGGGAATGAGGCTGTaGGTGATGCATCAAGTAGTTAATCCAGCAGCAGAT +
Preference number: 3 (lower is better)
Translates to: LGSIRAAEGMRL*VMHQVVNPAAD
Trigger: ATCTGCTGCTGGATTAACTACTTGATGCATCACCCACAGCCTCATTCCCTCTGCTGCACGGATGGATCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CAA 90 bp TCTTGTGTGTGTCTATTATTTCTCAACCTGCCAATCCGCCTGGGAACAGAGAGCGGCTTTCAGGAGCCTTaGTATTACGCCGCAGAGTCT +
Preference number: 3 (lower is better)
Translates to: SCVCLLFLNLPIRLGTESGFQEP*YYAAES
Trigger: AGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCC...GCTCTCTGTTCCCAGGCGGATTGGCAGGTTGAGAAATAATAGACACACACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 72 bp GTTACAAGTGATTGTCCAAAGGGGGACCACATTGTGTaGAGATGCTGGGGCCAGCTTTACAAGTTAGTGAGG +
Preference number: 3 (lower is better)
Translates to: VTSDCPKGDHIV*RCWGQLYKLVR
Trigger: CCTCACTAACTTGTAAAGCTGGCCCCAGCATCTCCACACAATGTGGTCCCCCTTTGGACAATCACTTGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp AGGGTGTTGAGTAACAGTTGGAATTTGCAAGGCCCATaGCCTGTACATAGACCTCCTATTGAGGCCAAATCC +
Preference number: 3 (lower is better)
Translates to: RVLSNSWNLQGP*PVHRPPIEAKS
Trigger: GGATTTGGCCTCAATAGGAGGTCTATGTACAGGGCATGGGCCTTGCAAATTCCAACTGTTACTCAACACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 72 bp GGGCCTGTCTTGGTATGTGCCTGTAAGAGAACTATTTaGGTTTGTCAGGGTCATAACCTCTTCCCGTCAACA +
Preference number: 3 (lower is better)
Translates to: GPVLVCACKRTI*VCQGHNLFPST
Trigger: TGTTGACGGGAAGAGGTTATGACCCTGACAAACCCAAATAGTTCTCTTACAGGCACATACCAAGACAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp TTTCACTATCTTGTGTGTGTCTATTATTTCTCAACCTaGCAATCCGCCTGGGAACAGAGAGCCCCGTTGCAT +
Preference number: 3 (lower is better)
Translates to: FHYLVCVYYFST*QSAWEQRAPLH
Trigger: ATGCAACGGGGCTCTCTGTTCCCAGGCGGATTGGCAGGTTGAGAAATAATAGACACACACAAGATAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CAA 90 bp TTCTGGGCACTGAGGTGGTCGTACCAAGTCACACCACCCTTTGAACAATTATCCAGGAGATTCCAAGTCTaGCTTATTACACATTCTCCT +
Preference number: 3 (lower is better)
Translates to: FWALRWSYQVTPPFEQLSRRFQV*LITHSP
Trigger: AGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCT...GGATAATTGTTCAAAGGGTGGTGTGACTTGGTACGACCACCTCAGTGCCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR-3UTR CAA 90 bp TGTTCAAAGCTAAAGGAGTTCCTCCAAACCAGTTCTATAATGGAGTTTCCCAGTTTCCAGGGGCCTGTCTaGGTATGTGCCTGTAAGAGA +
Preference number: 3 (lower is better)
Translates to: CSKLKEFLQTSSIMEFPSFQGPV*VCACKR
Trigger: TCTCTTACAGGCACATACCAAGACAGGCCCCTGGAA...ACTGGGAAACTCCATTATAGAACTGGTTTGGAGGAACTCCTTTAGCTTTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CAA 90 bp TTCACATTTTGTTACCCAAAGATAACTCATGACAGCACATCTATTCTGGGCACTGGCTTTCAGGAGCCTTaGTATTACGCCGCAGAGTCT +
Preference number: 3 (lower is better)
Translates to: FTFCYPKITHDSTSILGTGFQEP*YYAAES
Trigger: AGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCC...AGTGCCCAGAATAGATGTGCTGTCATGAGTTATCTTTGGGTAACAAAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR TCA 72 bp AGCTCTTTGTCCTTAGACCAGGACGCAAAGGAGACTTaGAAACATCCTAGAGAATTCAGGGTGTTGAGTAAC +
Preference number: 3 (lower is better)
Translates to: SSLSLDQDAKET*KHPREFRVLSN
Trigger: GTTACTCAACACCCTGAATTCTCTAGGATGTTTTCAAGTCTCCTTTGCGTCCTGGTCTAAGGACAAAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 72 bp AAACATCCTAGAGAATTCAGGGTGTTGAGTAACAGTTaGAATTTGCAAGGCCCATGCCCTGTACATAGACCT +
Preference number: 3 (lower is better)
Translates to: KHPREFRVLSNS*NLQGPCPVHRP
Trigger: AGGTCTATGTACAGGGCATGGGCCTTGCAAATTCCAACTGTTACTCAACACCCTGAATTCTCTAGGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR TCA 72 bp GGCACTGAGGTGGTCGTACCAAGTCACACCACCCTTTaGACAATTATCCTTGGAATAAATTGTTCCAAGAAT +
Preference number: 3 (lower is better)
Translates to: GTEVVVPSHTTL*TIILGINCSKN
Trigger: ATTCTTGGAACAATTTATTCCAAGGATAATTGTTCAAAGGGTGGTGTGACTTGGTACGACCACCTCAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR GCA 72 bp TGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACAGTaGTTAACCTTTGTCCCTTTCCTCTCAGACAGATCC +
Preference number: 3 (lower is better)
Translates to: CCECLLLCNIKQ*LTFVPFLSDRS
Trigger: GGATCTGTCTGAGAGGAAAGGGACAAAGGTTAAGCACTGTTTGATATTGCAAAGCAACAAACACTCACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CAA 90 bp GAGTACCCACATTTGAAGAAAGGGGTCAGCCATCAGAAGCTTGATTTCATATTTGAAGTTTGGGGTCTGTaGAAAAAGAGAAGAGGTTTG +
Preference number: 3 (lower is better)
Translates to: EYPHLKKGVSHQKLDFIFEVWGL*KKRRGL
Trigger: CAAACCTCTTCTCTTTTTCAACAGACCCCAAACTTC...AAATATGAAATCAAGCTTCTGATGGCTGACCCCTTTCTTCAAATGTGGGTACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR-3UTR CAA 90 bp GAGTACCCACATTTGAAGAAAGGGGTCAGCCATCAGAAGCTTGATTTCATATTTAGGAGATTCCAAGTCTaGCTTATTACACATTCTCCT +
Preference number: 3 (lower is better)
Translates to: EYPHLKKGVSHQKLDFIFRRFQV*LITHSP
Trigger: AGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCT...AAATATGAAATCAAGCTTCTGATGGCTGACCCCTTTCTTCAAATGTGGGTACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR TCA 72 bp GATGTAAGAATAAAGGGACAAAATATTGTAGGGTTTTaGGTGACAGGTGTTCTCAGAGGACTCTGTTGTGAC +
Preference number: 3 (lower is better)
Translates to: DVRIKGQNIVGF*VTGVLRGLCCD
Trigger: GTCACAACAGAGTCCTCTGAGAACACCTGTCACTCAAAACCCTACAATATTTTGTCCCTTTATTCTTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp TGCTTAACCTTTGTCCCTTTCCTCTCAGACAGATCCTaGAACTCAAATGAATTGCCTAAAAGAAATTTCCTG +
Preference number: 3 (lower is better)
Translates to: CLTFVPFLSDRS*NSNELPKRNFL
Trigger: CAGGAAATTTCTTTTAGGCAATTCATTTGAGTTGCAGGATCTGTCTGAGAGGAAAGGGACAAAGGTTAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR TCA 72 bp CAGTCTCAAATCTCCATCTCATGCTCTAGACTTGCCTaGTTTAACTTTGAAACCAGTCTGATTCTGAACTTT +
Preference number: 3 (lower is better)
Translates to: QSQISISCSRLA*FNFETSLILNF
Trigger: AAAGTTCAGAATCAGACTGGTTTCAAAGTTAAATCAGGCAAGTCTAGAGCATGAGATGGAGATTTGAGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CCA 72 bp CATGTTAATAATCTGACCATGATAGATGTTGGTCTTTaGAAGGTAGTCACACAGTATCAGAAACACTCAGAT +
Preference number: 3 (lower is better)
Translates to: HVNNLTMIDVGL*KVVTQYQKHSD
Trigger: ATCTGAGTGTTTCTGATACTGTGTGACTACCTTCCAAAGACCAACATCTATCATGGTCAGATTATTAACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR GCA 72 bp CAATTCCATTGTTATGCATCCTCCCTGTGTCTAAACTaGCTGATAAACAATCTTTTACTATACGAGTTATAT +
Preference number: 3 (lower is better)
Translates to: QFHCYASSLCLN*LINNLLLYELY
Trigger: ATATAACTCGTATAGTAAAAGATTGTTTATCAGGCAGTTTAGACACAGGGAGGATGCATAACAATGGAATTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp CAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTGATAAGAGCTGGACCTaGAGTTCACGCCCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: QGGGLSGAFVLRRRVWFSDKSWT*SSRPRA
Trigger: TGCGCGAGGGCGTGAACTGCAGGTCCAGCTCTTATC...ACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp CCTTTGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGGCAGATGCACTGTTTACGCCGCAGAGTCTaGTTCAGTAGGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PLYYAAESGSVGGWQMHCLRRRV*FSRRVA
Trigger: TGCCACCCTCCTACTGAACCAGACTCTGCGGCGTAA...ACAGTGCATCTGCCACCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp CAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGCCCTTTACTCACACGTaGCGTCCTGTAGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QYARWRAFRSLCITPQSLPFTHT*RPVAPA
Trigger: AGCAGGGGCTACAGGACGCCACGTGTGAGTAAAGGG...CAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp CAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTTTCTGTGCCCAAGTCTaGCCCAGCCCAGCTCAACAT +
Preference number: 4 (lower is better)
Translates to: QGGGLSGAFVLRRRVWFSFCAQV*PSPAQH
Trigger: ATGTTGAGCTGGGCTGGGCCAGACTTGGGCACAGAA...ACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp CCTTTGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGGCAGATGCACTGTCCATTGGCCTGCGTTTaGCACAGACGTCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PLYYAAESGSVGGWQMHCPLACV*HRRLLG
Trigger: TCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGG...ACAGTGCATCTGCCACCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp GGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGGTGGCAGATGCACTGTaGTCATCTGAAGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: GLSGAFVLRRRVWFSRRVVADAL*SSEAQM
Trigger: CATCTGAGCTTCAGATGATCACAGTGCATCTGCCAC...CACCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp TTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTTACGCCGCAGAGTCTaGTTCAGTAGGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FNMQGGGLSGAFVLRRRVLRRRV*FSRRVA
Trigger: TGCCACCCTCCTACTGAACCAGACTCTGCGGCGTAA...GACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCCCAGCGCGTGGCCCATaGGAGGCCCTCAGACCTATC +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLPARGP*EALRPI
Trigger: GATAGGTCTGAGGGCCTCCCATGGGCCACGCGCTGG...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR TCA 90 bp GGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGCTTTTACACAAGCAATaGGCAGGCAGGGTTTATCTG +
Preference number: 4 (lower is better)
Translates to: GLSGAFVLRRRVWFSRRVLLHKQ*AGRVYL
Trigger: CAGATAAACCCTGCCTGCTCATTGCTTGTGTAAAAG...CACCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp GGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGTTGCATACATTTTCATaGAGACCAGGACGAGGACCA +
Preference number: 4 (lower is better)
Translates to: GLSGAFVLRRRVWFSRRVLHTFS*RPGRGP
Trigger: TGGTCCTCGTCCTGGTCTTCATGAAAATGTATGCAA...CACCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510328.5
CDS-3UTR GCA 90 bp AATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGAGACCCCAAGGTACGTaGACACAGAGGACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: NSICKVEGFQEPLYYAAERPQGT*TQRTVD
Trigger: GTCCACTGTCCTCTGTGTGCACGTACCTTGGGGTCT...CTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGCTCAACATAGCCTTGTaGTGCCCATCCCTGCTACTA +
Preference number: 4 (lower is better)
Translates to: NMQGGGLSGAFVLRRRVWLNIAL*CPSLLL
Trigger: TAGTAGCAGGGATGGGCAGCACAAGGCTATGTTGAG...CCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp ATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTGGTTCAGTAGGAGGGTaGCAGATGCACTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: ICKVEGFQEPLYYAAESGGSVGG*QMHCDH
Trigger: ATGATCACAGTGCATCTGCCACCCTCCTACTGAACC...ACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp GCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCTTCTGGGCACTGAGGTaGTCGTACCAAGTCACACCA +
Preference number: 4 (lower is better)
Translates to: AEFNMQGGGLSGAFVLRRFWALR*SYQVTP
Trigger: TGGTGTGACTTGGTACGACCACCTCAGTGCCCAGAA...GCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp TTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTTCTGGGCACTGAGGTaGTCGTACCAAGTCACACCA +
Preference number: 4 (lower is better)
Translates to: FNMQGGGLSGAFVLRRRVFWALR*SYQVTP
Trigger: TGGTGTGACTTGGTACGACCACCTCAGTGCCCAGAA...GACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp ATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTACAGCACATCTATTCTaGGCACTGAGGTGGTCGTAC +
Preference number: 4 (lower is better)
Translates to: ICKVEGFQEPLYYAAESGTAHLF*ALRWSY
Trigger: GTACGACCACCTCAGTGCCCAGAATAGATGTGCTGT...ACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCGCGGGCAGCCCTTCCTaGAGTCGTCCAGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIAGSPS*SRPAPF
Trigger: GAAAGGGGCTGGACGACTTCAGGAAGGGCTGCCCGC...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR TCA 90 bp AATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGCTCTTGAGCCTTATGTaGGACCTCAGGGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: NSICKVEGFQEPLYYAAELLSLM*DLRVNQ
Trigger: CTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAG...CTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp TTCTGGGCACTGAGGTGGTCGTACCAAGTCACACCACCCTTTGAACAATTATCCATCTATTCTGGGCACTaGGGTGGTCGTACCAAGTCA +
Preference number: 4 (lower is better)
Translates to: FWALRWSYQVTPPFEQLSIYSGH*GGRTKS
Trigger: TGACTTGGTACGACCACCTCAGTGCCCAGAATAGAT...GGATAATTGTTCAAAGGGTGGTGTGACTTGGTACGACCACCTCAGTGCCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp CAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTCCCAAAGATAACTCATaGCAGCACATCTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: QGGGLSGAFVLRRRVWFSPKDNS*QHIYSG
Trigger: CCCAGAATAGATGTGCTGTCATGAGTTATCTTTGGG...ACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCATGTCCCAGCCACCTTaGATCCCCAGCGCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIMSQPP*IPSAWP
Trigger: GGGCCACGCGCTGGGGATTCAAGGTGGCTGGGACAT...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR GCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCAATGCCTTCCGAGCCTaGTGGGCTGGCGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLNAFRA*WAGESL
Trigger: CAAGCTCTCGCCAGCCCAGCAGGCTCGGAAGGCATT...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR GCA 90 bp AGTAGCTGTCCAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCGATAAGAGCTGGACCTaGAGTTCACGCCCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: SSCPIFRDVMSTTKPGDSDKSWT*SSRPRA
Trigger: TGCGCGAGGGCGTGAACTGCAGGTCCAGCTCTTATC...GGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTGGACAGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR GCA 90 bp GAGTACCCACATTTGAAGAAAGGGGTCAGCCATCAGAAGCTTGATTTCATATTTAGAGCCCCGTTGCATTaGGGGCTGCTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: EYPHLKKGVSHQKLDFIFRAPLH*GLLARS
Trigger: GGATCTGGCCAGCAGCCCGCAATGCAACGGGGCTCT...AAATATGAAATCAAGCTTCTGATGGCTGACCCCTTTCTTCAAATGTGGGTACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGGCCCCAGTTCAATGTaGGGCCCTAGGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLGPSSM*GPRSSR
Trigger: CCTGGATGACCTAGGGCCCCACATTGAACTGGGGCC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCGTTCGGCAATTTCGGTaGGGCGAGCGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIVRQFR*GERWAC
Trigger: GCAGGCCCAGCGCTCGCCCCACCGAAATTGCCGAAC...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
3UTR CAA 72 bp AATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTaGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NSICKVEGFQEP*YYAAESGSVGG
Trigger: CCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
3UTR CAA 72 bp CAAGGTACGTGCACACAGAGGACAGTGGACAAATGCTaGACATTATCAGCTATGACTTCAGCCCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: QGTCTQRTVDKC*TLSAMTSAPDA
Trigger: GGCATCTGGGGCTGAAGTCATAGCTGATAATGTCAAGCATTTGTCCACTGTCCTCTGTGTGCACGTACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 72 bp AAGGCGGTGACACCCCTGGACCCAGCTTTCACTATCTaGTGTGTGTCTATTATTTCTCAACCTGCCAATCCG +
Preference number: 4 (lower is better)
Translates to: KAVTPLDPAFTI*CVSIISQPANP
Trigger: CGGATTGGCAGGTTGAGAAATAATAGACACACACAAGATAGTGAAAGCTGGGTCCAGGGGTGTCACCGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 72 bp AAATTGCATGCAGGATTGTGTAAAGACAATGCCAGGTaGGGCTGCCAGAACGAGCCAACAGCGCATGATGTG +
Preference number: 4 (lower is better)
Translates to: KLHAGLCKDNAR*GCQNEPTAHDV
Trigger: CACATCATGCGCTGTTGGCTCGTTCTGGCAGCCCAACCTGGCATTGTCTTTACACAATCCTGCATGCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCACCAACTGCCGGCTGTaGAGAGAGGTGGGGAACTTC +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLTNCRL*REVGNF
Trigger: GAAGTTCCCCACCTCTCTGCACAGCCGGCAGTTGGT...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR GCA 90 bp GCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCGGCTCGTCTACTCTTTaGTTTTTCCACAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: AEFNMQGGGLSGAFVLRRGSSTL*FFHNLG
Trigger: CCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCC...GCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp GGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGCTTATAAGGATTCTGTaGTTTCTGGAGTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GLSGAFVLRRRVWFSRRVLIRIL*FLEFPL
Trigger: GAGAGGAAACTCCAGAAACCACAGAATCCTTATAAG...CACCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGGGTTCAGTAGGAGGGTaGCAGATGCACTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: NSICKVEGFQEPLYYAAEGSVGG*QMHCDH
Trigger: ATGATCACAGTGCATCTGCCACCCTCCTACTGAACC...CTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp GAAACACTCAGATGGAATTCACACTTGTTCTGTGCCCAAGTCTGGCCCAGCCCAGTGTTGAGTAACAGTTaGAATTTGCAAGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: ETLRWNSHLFCAQVWPSPVLSNS*NLQGPC
Trigger: GCATGGGCCTTGCAAATTCCAACTGTTACTCAACAC...TGGGCTGGGCCAGACTTGGGCACAGAACAAGTGTGAATTCCATCTGAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 72 bp AACTTAATAATAAATGCTGGTATATCCAGTGCATTGTaGGCACCGTGGGACCAGAAGGCGGTGACACCCCTG +
Preference number: 4 (lower is better)
Translates to: NLIINAGISSAL*APWDQKAVTPL
Trigger: CAGGGGTGTCACCGCCTTCTGGTCCCACGGTGCCAACAATGCACTGGATATACCAGCATTTATTATTAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp GTAGCTGTCCAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCACCATTGGCCTGCGTTTaGCACAGACGTCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VAVQSLEMSCLPQSQEIPPLACV*HRRLLG
Trigger: TCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGG...TGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTGGACAGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp ACAGTGGACAAATGCTTGACATTATCAGCTATGACTTCAGCCCCAGATGCCTATCTCTTGAGCCTTATGTaGGACCTCAGGGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: TVDKCLTLSAMTSAPDAYLLSLM*DLRVNQ
Trigger: CTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAG...ATAGGCATCTGGGGCTGAAGTCATAGCTGATAATGTCAAGCATTTGTCCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp GAGTACCCACATTTGAAGAAAGGGGTCAGCCATCAGAAGCTTGATTTCATATTTTCCCGTCAACAACTGTaGGCCATGAAGCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EYPHLKKGVSHQKLDFIFSRQQL*AMKPLS
Trigger: GCTGAGGGGCTTCATGGCTCACAGTTGTTGACGGGA...AAATATGAAATCAAGCTTCTGATGGCTGACCCCTTTCTTCAAATGTGGGTACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCACATGCTTGCTGGCATaGTCTCAGCAGGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLTCLLA*SQQAPG
Trigger: ACCAGGTGCCTGCTGAGATCATGCCAGCAAGCATGT...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR GCA 90 bp GAAACACTCAGATGGAATTCACACTTGTTCTGTGCCCAAGTCTGGCCCAGCCCATTGCTGAATTCAATATaGAAGGTGGAGGGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ETLRWNSHLFCAQVWPSPLLNSI*KVEGFQ
Trigger: CTGAAAGCCCTCCACCTTGCATATTGAATTCAGCAA...TGGGCTGGGCCAGACTTGGGCACAGAACAAGTGTGAATTCCATCTGAGTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp GGCATACTCCCTTCTGAGAATTTCTGGTCTAACTGGTTGTCTAGCTTCACCTCCGTAACAGTTGGAATTTaGAAGGCCCATGCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: GILPSENFWSNWLSSFTSVTVGI*KAHALY
Trigger: GTACAGGGCATGGGCCTTGCAAATTCCAACTGTTAC...GGAGGTGAAGCTAGACAACCAGTTAGACCAGAAATTCTCAGAAGGGAGTATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AAATTGTTCCAAGAATGGTGGAATAGCATGAGTAGCTGTCCAATCTTTAGAGATCTGATCTGGGCACACTaGTCGAGGCAGCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: KLFQEWWNSMSSCPIFRDLIWAH*SRQQAL
Trigger: GAGGGCCTGCTGCCTCGAGCAGTGTGCCCAGATCAG...ATCTCTAAAGATTGGACAGCTACTCATGCTATTCCACCATTCTTGGAACAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCCTGCTGGCCAGATCCTaGAATAGCCAGTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLLLARS*NSQCVR
Trigger: CCTGACACACTGGCTATTGCAGGATCTGGCCAGCAG...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGATCTGCCTCTTCTTTaGGGCCAGTTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLDLPLL*GQLGSS
Trigger: AGAGCTCCCCAACTGGCCCCAAAGAAGAGGCAGATC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR CCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAGGATGTGGGGTCAGGTaGGCCTCCACGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLGCGVR*ASTSSR
Trigger: CCTGGAGGACGTGGAGGCCCACCTGACCCCACATCC...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR CCA 90 bp GCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCGAGCGCATCATGGCTTaGTTTGGTCTCATAGTCAAT +
Preference number: 4 (lower is better)
Translates to: AEFNMQGGGLSGAFVLRRERIMA*FGLIVN
Trigger: ATTGACTATGAGACCAAACCAAGCCATGATGCGCTC...GCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp ATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTTATTACACATTCTCCTTCTGCGTCTTGTAAACTaGGGTGCCACAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: MSTTKPGDSKSCLLHILLLRLVN*GATAWW
Trigger: CCACCAGGCTGTGGCACCCCAGTTTACAAGACGCAG...AAGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCCTCTTGAGCCTTATGTaGGACCTCAGGGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLLLSLM*DLRVNQ
Trigger: CTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAG...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp CTCCTTGCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTAGTGGCAGATGCACTGTaGTCATCTGAAGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: LLAEFNMQGGGLSGAFVLVADAL*SSEAQM
Trigger: CATCTGAGCTTCAGATGATCACAGTGCATCTGCCAC...TAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp CAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTCAGGACAATCAAATATaGTTTGATCAGTCCCAACAT +
Preference number: 4 (lower is better)
Translates to: QGGGLSGAFVLRRRVWFSQDNQI*FDQSQH
Trigger: ATGTTGGGACTGATCAAATCATATTTGATTGTCCTG...ACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCCTTGGAAATACCAACTaGCGGCTGTGCAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLLGNTN*RLCREV
Trigger: CACCTCTCTGCACAGCCGGCAGTTGGTATTTCCAAG...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR GCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTACACGTCCTCCAGGAATaGCTTCCGAGCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLHVLQE*LPSLLG
Trigger: GCCCAGCAGGCTCGGAAGGCATTCCTGGAGGACGTG...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR GCA 90 bp TTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTTGCTGAATTCAATATaGAAGGTGGAGGGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: FNMQGGGLSGAFVLRRRVLLNSI*KVEGFQ
Trigger: CTGAAAGCCCTCCACCTTGCATATTGAATTCAGCAA...GACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR GCA 90 bp AGGCAGGGTTTATCTGTAGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTCTTGGGATCCATCCGTaGAGCAGAGGGAATGAGGCT +
Preference number: 4 (lower is better)
Translates to: RQGLSVVKLEHTLVVSVCLGIHP*SRGNEA
Trigger: AGCCTCATTCCCTCTGCTGCACGGATGGATCCCAAG...ACAAACACTCACAACAAGGGTGTGCTCTAATTTTACTACAGATAAACCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AGGCAGGGTTTATCTGTAGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTTCACACTTGTTCTGTaGCCAAGTCTGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RQGLSVVKLEHTLVVSVCFTLVL*PSLAQP
Trigger: GGGCTGGGCCAGACTTGGGCACAGAACAAGTGTGAA...ACAAACACTCACAACAAGGGTGTGCTCTAATTTTACTACAGATAAACCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTTGGCAAACAAAACTTaGACAGTACAGTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: NSICKVEGFQEPLYYAAELANKT*TVQSSP
Trigger: TGGGGAGGACTGTACTGTGCAAGTTTTGTTTGCCAA...CTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCATTCTCAAGGAAACGTaGCGTCCTGTAGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLILKET*RPVAPA
Trigger: AGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAAT...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000510197.5
CDS-3UTR CCA 90 bp CTCCTTGCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTAACAGCACATCTATTCTaGGCACTGAGGTGGTCGTAC +
Preference number: 4 (lower is better)
Translates to: LLAEFNMQGGGLSGAFVLTAHLF*ALRWSY
Trigger: GTACGACCACCTCAGTGCCCAGAATAGATGTGCTGT...TAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp GCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCCACCTCCTGTTTCCATaGATTGTTTGTAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: AEFNMQGGGLSGAFVLRRHLLFP*IVCNQL
Trigger: AAGCTGGTTACAAACAATCCATGGAAACAGGAGGTG...GCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGCAGAACATGCTTGCTaGCATGATCTCAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLAEHAC*HDLSRH
Trigger: GTGCCTGCTGAGATCATGCCAGCAAGCATGTTCTGC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR TCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTACCCTCCACAGGGACCTaGGTCACCAGACCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLPSTGT*VTRPVQ
Trigger: TTGCACTGGTCTGGTGACTCAGGTCCCTGTGGAGGG...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR TCA 90 bp GCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAATGGTGGAATAGCATaGGTAGCTGTCCAATCTTTA +
Preference number: 4 (lower is better)
Translates to: AEFNMQGGGLSGAFVLRRNGGIA*VAVQSL
Trigger: TAAAGATTGGACAGCTACTCATGCTATTCCACCATT...GCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp ACAGTGGACAAATGCTTGACATTATCAGCTATGACTTCAGCCCCAGATGCCTATAAGAGTACCCACATTTaGAGAAAGGGGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: TVDKCLTLSAMTSAPDAYKSTHI*RKGSAI
Trigger: GATGGCTGACCCCTTTCTTCAAATGTGGGTACTCTT...ATAGGCATCTGGGGCTGAAGTCATAGCTGATAATGTCAAGCATTTGTCCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp GTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACAACAACTGTGAGCCATaGAGCCCCTCAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VKLEHTLVVSVCCFAISNNNCEP*SPSAGP
Trigger: AGGCCCTGCTGAGGGGCTTCATGGCTCACAGTTGTT...GTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp TTCACATTTTGTTACCCAAAGATAACTCATGACAGCACATCTATTCTGGGCACTGCCATATCCTATCTCTaGGTCCCCGTCTGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: FTFCYPKITHDSTSILGTAISYL*VPVWGE
Trigger: TTCTCCCCAGACGGGGACTCAGAGATAGGATATGGC...AGTGCCCAGAATAGATGTGCTGTCATGAGTTATCTTTGGGTAACAAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp ATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTGACGCAAAGGAGACTTaGAAACATCCTAGAGAATTC +
Preference number: 4 (lower is better)
Translates to: IQYARWRAFRSLCITPQSDAKET*KHPREF
Trigger: GAATTCTCTAGGATGTTTTCAAGTCTCCTTTGCGTC...ACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTTGAGCAGCTTGATCTaGCTCTTCTTTGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLLSSLI*LFFGAS
Trigger: ACTGGCCCCAAAGAAGAGGCAGATCAAGCTGCTCAA...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR GCA 90 bp ACAGTGGACAAATGCTTGACATTATCAGCTATGACTTCAGCCCCAGATGCCTATGGCTCGTCTACTCTTTaGTTTTTCCACAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: TVDKCLTLSAMTSAPDAYGSSTL*FFHNLG
Trigger: CCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCC...ATAGGCATCTGGGGCTGAAGTCATAGCTGATAATGTCAAGCATTTGTCCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGCTCTCAGACAGATCCTaGAACTCAAATGAATTGCCT +
Preference number: 4 (lower is better)
Translates to: NSICKVEGFQEPLYYAAELSDRS*NSNELP
Trigger: AGGCAATTCATTTGAGTTGCAGGATCTGTCTGAGAG...CTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp GAAACACTCAGATGGAATTCACACTTGTTCTGTGCCCAAGTCTGGCCCAGCCCAACAATTCCATTGTTATaGATCCTCCCTGTGTCTAAA +
Preference number: 4 (lower is better)
Translates to: ETLRWNSHLFCAQVWPSPTIPLL*ILPVSK
Trigger: TTTAGACACAGGGAGGATGCATAACAATGGAATTGT...TGGGCTGGGCCAGACTTGGGCACAGAACAAGTGTGAATTCCATCTGAGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp GAGTACCCACATTTGAAGAAAGGGGTCAGCCATCAGAAGCTTGATTTCATATTTGCCTATCTAGTCTCCTaGTGCAGTGACAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: EYPHLKKGVSHQKLDFIFAYLVS*CSDRAD
Trigger: ATCAGCCCTGTCACTGCAGCAGGAGACTAGATAGGC...AAATATGAAATCAAGCTTCTGATGGCTGACCCCTTTCTTCAAATGTGGGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AGAGCACACCCTTGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACAGTGCTTAGCTCTGGGAATGGAATaGGACCCTTGTGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RAHPCCECLLLCNIKQCLALGME*DPCGKP
Trigger: AGGCTTTCCACAAGGGTCGCATTCCATTCCCAGAGC...TAAGCACTGTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp GTAGCTGTCCAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCAACACAGACGTCTTCTTaGAAGGTCCCAGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: VAVQSLEMSCLPQSQEIPTQTSS*KVPGRL
Trigger: AAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGT...TGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTGGACAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp CAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTACCTTTGATAAGAGCTaGACCTGCAGTTCACGCCCT +
Preference number: 4 (lower is better)
Translates to: QSLEMSCLPQSQEIPSLATFDKS*TCSSRP
Trigger: AGGGCGTGAACTGCAGGTCCAGCTCTTATCAAAGGT...AGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp CTCCTGTTTCCATGGATTGTTTGTAACCAGCTTTTGTGGCAACTGTTACTGTTGTCCAGGGGCCTGTCTTaGTATGTGCCTGTAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LLFPWIVCNQLLWQLLLLSRGLS*YVPVRE
Trigger: TTCTCTTACAGGCACATACCAAGACAGGCCCCTGGA...CAACAGTAACAGTTGCCACAAAAGCTGGTTACAAACAATCCATGGAAACAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp GGCATACTCCCTTCTGAGAATTTCTGGTCTAACTGGTTGTCTAGCTTCACCTCCGACCATGATAGATGTTaGTCTTTGGAAGGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: GILPSENFWSNWLSSFTSDHDRC*SLEGSH
Trigger: GTGACTACCTTCCAAAGACCAACATCTATCATGGTC...GGAGGTGAAGCTAGACAACCAGTTAGACCAGAAATTCTCAGAAGGGAGTATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 72 bp ATTTGCAAGGCCCATGCCCTGTACATAGACCTCCTATaGAGGCCAAATCCAAGGAAGATGAGTCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: ICKAHALYIDLL*RPNPRKMSQRS
Trigger: TGATCTTTGACTCATCTTCCTTGGATTTGGCCTCAATAGGAGGTCTATGTACAGGGCATGGGCCTTGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp TGTTCAAAGCTAAAGGAGTTCCTCCAAACCAGTTCTATAATGGAGTTTCCCAGTTCTCCTGCAGTTTACTaGGCCCCACACTACGCTTTA +
Preference number: 4 (lower is better)
Translates to: CSKLKEFLQTSSIMEFPSSPAVY*APHYAL
Trigger: TAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGA...ACTGGGAAACTCCATTATAGAACTGGTTTGGAGGAACTCCTTTAGCTTTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp ATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCGATTCTTCTATGCTTaGGTTCGTTTTATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: IQYARWRAFRSLCITPQSRFFYA*VRFIGV
Trigger: GACTCCTATAAAACGAACTCAAGCATAGAAGAATCG...ACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTTGCCAAGTCAAAGTTaGACATCCACAGTGGGACAC +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLLPSQS*TSTVGH
Trigger: GTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAA...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp ATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTAATGGTGGAATAGCATaGGTAGCTGTCCAATCTTTA +
Preference number: 4 (lower is better)
Translates to: IQYARWRAFRSLCITPQSNGGIA*VAVQSL
Trigger: TAAAGATTGGACAGCTACTCATGCTATTCCACCATT...ACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp AGAGCACACCCTTGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACAGTGCTTAATCTATTCTGGGCACTaGGGTGGTCGTACCAAGTCA +
Preference number: 4 (lower is better)
Translates to: RAHPCCECLLLCNIKQCLIYSGH*GGRTKS
Trigger: TGACTTGGTACGACCACCTCAGTGCCCAGAATAGAT...TAAGCACTGTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGAACAATTCCATTGTTATGCATCCTCCCTGTGTCTAAACTGCCTGATAAACAACTCAGCAGGGCCTTCTaGAAGGACCCTTTACTCACA +
Preference number: 4 (lower is better)
Translates to: RTIPLLCILPVSKLPDKQLSRAF*KDPLLT
Trigger: TGTGAGTAAAGGGTCCTTTCAGAAGGCCCTGCTGAG...TTGTTTATCAGGCAGTTTAGACACAGGGAGGATGCATAACAATGGAATTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGCGGAATGAGTAAATaGGTGTGTGAACCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLCGMSK*VCEPGS
Trigger: CGAACCTGGTTCACACACTCATTTACTCATTCCGCA...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR GCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGGCTCGTCTACTCTTTaGTTTTTCCACAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLGSSTL*FFHNLG
Trigger: CCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR GCA 90 bp TCTTGTGTGTGTCTATTATTTCTCAACCTGCCAATCCGCCTGGGAACAGAGAGCAGGAGTCTTATTACATaGACGTTTACATTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SCVCLLFLNLPIRLGTESRSLIT*TFTFLP
Trigger: GGGAAGGAATGTAAACGTGCATGTAATAAGACTCCT...GCTCTCTGTTCCCAGGCGGATTGGCAGGTTGAGAAATAATAGACACACACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGATACATACCTGTTCCTaGAGCTCCTTTTTAAAATTC +
Preference number: 4 (lower is better)
Translates to: NMQGGGLSGAFVLRRRVWIHTCS*SSFLKF
Trigger: GAATTTTAAAAAGGAGCTGCAGGAACAGGTATGTAT...CCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR GCA 90 bp GAGTACCCACATTTGAAGAAAGGGGTCAGCCATCAGAAGCTTGATTTCATATTTTATCTAGTCTCCTGCTaGAGTGACAGGGCTGATCTG +
Preference number: 4 (lower is better)
Translates to: EYPHLKKGVSHQKLDFIFYLVSC*SDRADL
Trigger: CAGATCAGCCCTGTCACTGCAGCAGGAGACTAGATA...AAATATGAAATCAAGCTTCTGATGGCTGACCCCTTTCTTCAAATGTGGGTACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp CTCCTGTTTCCATGGATTGTTTGTAACCAGCTTTTGTGGCAACTGTTACTGTTGCCAGTGTGTCAGGCATaGTTCCTTTTGCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: LLFPWIVCNQLLWQLLLLPVCQA*FLLPKT
Trigger: AGTTTTGGGCAAAAGGAAGCATGCCTGACACACTGG...CAACAGTAACAGTTGCCACAAAAGCTGGTTACAAACAATCCATGGAAACAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAGGCTGTGCAGAGAGGTaGGGAACTTCAGCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLGCAER*GTSARS
Trigger: AGAACGGGCTGAAGTTCCCCACCTCTCTGCACAGCC...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCGTCCAGCCCCTTTCTTaGAAATACCAACTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIVQPLS*KYQLPA
Trigger: AGCCGGCAGTTGGTATTTCCAAGAAAGGGGCTGGAC...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCACACAGACGTCTTCTTaGAAGGTCCCAGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLTQTSS*KVPGRL
Trigger: AAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGT...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp TTCTGGGCACTGAGGTGGTCGTACCAAGTCACACCACCCTTTGAACAATTATCCCGAGGACCATTTTCATaGAGCAAATCCATTTTATGT +
Preference number: 4 (lower is better)
Translates to: FWALRWSYQVTPPFEQLSRGPFS*SKSILC
Trigger: ACATAAAATGGATTTGCTCCATGAAAATGGTCCTCG...GGATAATTGTTCAAAGGGTGGTGTGACTTGGTACGACCACCTCAGTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTTTAGCTTCATCGTGTaGAGCGCATCATGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLFSFIV*SASWLG
Trigger: ACCAAGCCATGATGCGCTCCACACGATGAAGCTAAA...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCATTCTCAAGGAAACGTaGCGTCCTGTAGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIILKET*RPVAPA
Trigger: AGCAGGGGCTACAGGACGCCACGTTTCCTTGAGAAT...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000510197.5
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGAGGGAATGAGGCTGTaGGTGATGCATCAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLEGMRL*VMHQVV
Trigger: AACTACTTGATGCATCACCCACAGCCTCATTCCCTC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp GTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACCCTGCTACTAAGGCTTaGGATCCATCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VKLEHTLVVSVCCFAISNPATKA*DPSVQQ
Trigger: CTGCTGCACGGATGGATCCCAAGCCTTAGTAGCAGG...GTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGGTTTATTTGGCTCATaGTTCTGCAGGCTGGACAAG +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLGLFGS*FCRLDK
Trigger: CTTGTCCAGCCTGCAGAACCATGAGCCAAATAAACC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR TCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGAAATTCCATTTTCATaGAGACCAGGACGAGGACCA +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLEIPFS*RPGRGP
Trigger: TGGTCCTCGTCCTGGTCTTCATGAAAATGGAATTTC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000502320.2
CDS-3UTR TCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCTCTCCTGCAGTTTACTaGGCCCCACACTACGCTTTA +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLISPAVY*APHYAL
Trigger: TAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGA...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp ATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTTATTACACATTCTCCTTTTGCCAAGTCAAAGTTaGACATCCACAGTGGGACAC +
Preference number: 4 (lower is better)
Translates to: MSTTKPGDSKSCLLHILLLPSQS*TSTVGH
Trigger: GTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAA...AAGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp CTCCTGTTTCCATGGATTGTTTGTAACCAGCTTTTGTGGCAACTGTTACTGTTGAGCACACCCTTGTTGTaGGTGTTTGTTGCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LLFPWIVCNQLLWQLLLLSTPLL*VFVALQ
Trigger: TTGCAAAGCAACAAACACTCACAACAAGGGTGTGCT...CAACAGTAACAGTTGCCACAAAAGCTGGTTACAAACAATCCATGGAAACAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGAACAATTCCATTGTTATGCATCCTCCCTGTGTCTAAACTGCCTGATAAACAACAACCCTGTTACAAGTaGTTGTCCAAAGGGGGACCA +
Preference number: 4 (lower is better)
Translates to: RTIPLLCILPVSKLPDKQQPCYK*LSKGGP
Trigger: TGGTCCCCCTTTGGACAATCACTTGTAACAGGGTTG...TTGTTTATCAGGCAGTTTAGACACAGGGAGGATGCATAACAATGGAATTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp GAGTACCCACATTTGAAGAAAGGGGTCAGCCATCAGAAGCTTGATTTCATATTTAAGAACTCTGTCTCCTaGAGTTTACTGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: EYPHLKKGVSHQKLDFIFKNSVS*SLLSPT
Trigger: TGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTT...AAATATGAAATCAAGCTTCTGATGGCTGACCCCTTTCTTCAAATGTGGGTACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp ATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTTTTTTAAAAGCTTCGTaGGTTCCTTCATTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: IQYARWRAFRSLCITPQSFLKAS*VPSFLS
Trigger: GGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAA...ACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp TTCACATTTTGTTACCCAAAGATAACTCATGACAGCACATCTATTCTGGGCACTACCTTTGATAAGAGCTaGACCTGCAGTTCACGCCCT +
Preference number: 4 (lower is better)
Translates to: FTFCYPKITHDSTSILGTTFDKS*TCSSRP
Trigger: AGGGCGTGAACTGCAGGTCCAGCTCTTATCAAAGGT...AGTGCCCAGAATAGATGTGCTGTCATGAGTTATCTTTGGGTAACAAAATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTACCATTGGCCTGCGTTTaGCACAGACGTCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLPLACV*HRRLLG
Trigger: TCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGG...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp TGTTCAAAGCTAAAGGAGTTCCTCCAAACCAGTTCTATAATGGAGTTTCCCAGTGAAATTCCATTTTCATaGAGACCAGGACGAGGACCA +
Preference number: 4 (lower is better)
Translates to: CSKLKEFLQTSSIMEFPSEIPFS*RPGRGP
Trigger: TGGTCCTCGTCCTGGTCTTCATGAAAATGGAATTTC...ACTGGGAAACTCCATTATAGAACTGGTTTGGAGGAACTCCTTTAGCTTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCCAAACTGTTTCAAGATaGACTCTTCATCGATGTCCG +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLQTVSR*TLHRCP
Trigger: CGGACATCGATGAAGAGTTCATCTTGAAACAGTTTG...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTACTCTTGAGCCTTATGTaGGACCTCAGGGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLLLSLM*DLRVNQ
Trigger: CTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAG...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCTTGCCAAGTCAAAGTTaGACATCCACAGTGGGACAC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLILPSQS*TSTVGH
Trigger: GTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAA...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTACACATGCCCCTTACGTaGCAAACTTATGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLHMPLT*QTYASP
Trigger: GGGGGATGCATAAGTTTGTCACGTAAGGGGCATGTG...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR GCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCAAGAACTCTGTCTCCTaGAGTTTACTGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIKNSVS*SLLSPT
Trigger: TGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTT...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR GCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCGGCTCGTCTACTCTTTaGTTTTTCCACAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIGSSTL*FFHNLG
Trigger: CCCCAAGTTGTGGAAAAAGCAAAGAGTAGACGAGCC...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR GCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAACCAGTACCCCACAGTaGCTGCGTCTTGTAAACTGG +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLTSTPQ*LRLVNW
Trigger: CCAGTTTACAAGACGCAGGCACTGTGGGGTACTGGT...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp TATCTAGGAGAAGTTTGGGGTCTGTTGAAAAAGAGAAGAGGTTTGCAAATATCCAATTTGCAAGGCCCATaGCCTGTACATAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: YLGEVWGLLKKRRGLQISNLQGP*PVHRPP
Trigger: AGGAGGTCTATGTACAGGGCATGGGCCTTGCAAATT...GGATATTTGCAAACCTCTTCTCTTTTTCAACAGACCCCAAACTTCTCCTAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp GTAGCTGTCCAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCACAGGAAGTGAACTTTTaGCTTAGCCTGTTTCTACTT +
Preference number: 4 (lower is better)
Translates to: VAVQSLEMSCLPQSQEIPQEVNF*LSLFLL
Trigger: AAGTAGAAACAGGCTAAGGCAAAAGTTCACTTCCTG...TGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTGGACAGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTACAGGCAGAACATGCTTaGTGGCATGATCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLQAEHA*WHDLSR
Trigger: CCTGCTGAGATCATGCCAGCAAGCATGTTCTGCCTG...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR GCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTTCCATTCTTGCACATaGCCCTTACGTGACAAACTT +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLFHSCT*PLRDKL
Trigger: AAGTTTGTCACGTAAGGGGCATGTGCAAGAATGGAA...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR GCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCCACATCTTCCATTCTTaGACATGCCCCTTACGTGAC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIHIFHS*TCPLRD
Trigger: GTCACGTAAGGGGCATGTGCAAGAATGGAAGATGTG...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCCCTTCATTCCTTTCCTaGTGTCCTGACAATAAGCCC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIPSFLS*CPDNKP
Trigger: GGGCTTATTGTCAGGACACCAGGAAAGGAATGAAGG...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCACACAGACGTCTTCTTaGAAGGTCCCAGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLITQTSS*KVPGRL
Trigger: AAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGT...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCTTTAGCTTCATCGTGTaGAGCGCATCATGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIFSFIV*SASWLG
Trigger: ACCAAGCCATGATGCGCTCCACACGATGAAGCTAAA...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCCATCTTCACCCACTTTaGCTTATAAGGATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLHLHPL*LIRILW
Trigger: CCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATG...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp ATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTTATTACACATTCTCCTTATTCAATATGCAAGGTaGAGGGCTTTCAGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: MSTTKPGDSKSCLLHILLIQYAR*RAFRSL
Trigger: AAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAAT...AAGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp AAGATTAAAATGACCATCCTTCCTGTCTTAGCTTTCCAATCTGAAGAAGACAATAAGACAATGCCAGGTTaGGCTGCCAGAACGAGCCAA +
Preference number: 4 (lower is better)
Translates to: KIKMTILPVLAFQSEEDNKTMPG*AARTSQ
Trigger: TTGGCTCGTTCTGGCAGCCCAACCTGGCATTGTCTT...ATTGTCTTCTTCAGATTGGAAAGCTAAGACAGGAAGGATGGTCATTTTAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTATCTCCTGCAGTTTACTaGGCCCCACACTACGCTTTA +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLSPAVY*APHYAL
Trigger: TAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGA...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCCGATTCTTCTATGCTTaGGTTCGTTTTATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLRFFYA*VRFIGV
Trigger: GACTCCTATAAAACGAACTCAAGCATAGAAGAATCG...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp CTCCTGTTTCCATGGATTGTTTGTAACCAGCTTTTGTGGCAACTGTTACTGTTGAATATTGTAGGGTTTTaGGTGACAGGTGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LLFPWIVCNQLLWQLLLLNIVGF*VTGVLR
Trigger: TCTGAGAACACCTGTCACTCAAAACCCTACAATATT...CAACAGTAACAGTTGCCACAAAAGCTGGTTACAAACAATCCATGGAAACAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCTTGCATACATTTTCATaGAGACCAGGACGAGGACCA +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLILHTFS*RPGRGP
Trigger: TGGTCCTCGTCCTGGTCTTCATGAAAATGTATGCAA...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR GCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCTTCAGCCCGTTCTTGTaGTTTGTGAAACATCTGGAC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIFSPFL*FVKHLD
Trigger: GTCCAGATGTTTCACAAAGCACAAGAACGGGCTGAA...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR GCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCAGGAGTCTTATTACATaGACGTTTACATTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLRSLIT*TFTFLP
Trigger: GGGAAGGAATGTAAACGTGCATGTAATAAGACTCCT...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR GCA 90 bp AAGATTAAAATGACCATCCTTCCTGTCTTAGCTTTCCAATCTGAAGAAGACAATAACATAGCCTTGTGCTaGCCATCCCTGCTACTAAGG +
Preference number: 4 (lower is better)
Translates to: KIKMTILPVLAFQSEEDNNIALC*PSLLLR
Trigger: CCTTAGTAGCAGGGATGGGCAGCACAAGGCTATGTT...ATTGTCTTCTTCAGATTGGAAAGCTAAGACAGGAAGGATGGTCATTTTAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTATACGTGACAAACTTATaGATCCCCCAGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLYVTNL*IPQAPV
Trigger: AACTGGGGCCTGGGGGATGCATAAGTTTGTCACGTA...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCCATCATGGCTTGGTTTaGTCTCATAGTCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLHHGLV*SHSQCQ
Trigger: TTGACATTGACTATGAGACCAAACCAAGCCATGATG...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp AGGCAGGGTTTATCTGTAGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTGTTGAACATCCACAGTaGGACACTCATCATAAACTC +
Preference number: 4 (lower is better)
Translates to: RQGLSVVKLEHTLVVSVCVEHPQ*DTHHKL
Trigger: GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAAC...ACAAACACTCACAACAAGGGTGTGCTCTAATTTTACTACAGATAAACCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGAACAATTCCATTGTTATGCATCCTCCCTGTGTCTAAACTGCCTGATAAACAAATTGTGTGGAGATGCTaGGGCCAGCTTTACAAGTTA +
Preference number: 4 (lower is better)
Translates to: RTIPLLCILPVSKLPDKQIVWRC*GQLYKL
Trigger: TAACTTGTAAAGCTGGCCCCAGCATCTCCACACAAT...TTGTTTATCAGGCAGTTTAGACACAGGGAGGATGCATAACAATGGAATTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp TTGTTCCAAGAATGGTGGAATAGCATGAGTAGCTGTCCAATCTTTAGAGATGTCCCTTCTGAGAATTTCTaGTCTAACTGGTTGTCTAGC +
Preference number: 4 (lower is better)
Translates to: LFQEWWNSMSSCPIFRDVPSENF*SNWLSS
Trigger: GCTAGACAACCAGTTAGACCAGAAATTCTCAGAAGG...GACATCTCTAAAGATTGGACAGCTACTCATGCTATTCCACCATTCTTGGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGAACAATTCCATTGTTATGCATCCTCCCTGTGTCTAAACTGCCTGATAAACAACAAACTGTTTCAAGATaGACTCTTCATCGATGTCCG +
Preference number: 4 (lower is better)
Translates to: RTIPLLCILPVSKLPDKQQTVSR*TLHRCP
Trigger: CGGACATCGATGAAGAGTTCATCTTGAAACAGTTTG...TTGTTTATCAGGCAGTTTAGACACAGGGAGGATGCATAACAATGGAATTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCCAAACTGTTTCAAGATaGACTCTTCATCGATGTCCG +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIQTVSR*TLHRCP
Trigger: CGGACATCGATGAAGAGTTCATCTTGAAACAGTTTG...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp ATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTTATTACACATTCTCCTTAGTCACACCACCCTTTaGACAATTATCCTTGGAATA +
Preference number: 4 (lower is better)
Translates to: MSTTKPGDSKSCLLHILLSHTTL*TIILGI
Trigger: TATTCCAAGGATAATTGTTCAAAGGGTGGTGTGACT...AAGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR TCA 90 bp GTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACCCCAAAGATAACTCATaGCAGCACATCTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: VKLEHTLVVSVCCFAISNPKDNS*QHIYSG
Trigger: CCCAGAATAGATGTGCTGTCATGAGTTATCTTTGGG...GTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCAAGTTTGGGGTCTGTTaGAAAAGAGAAGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIKFGVC*KREEVC
Trigger: GCAAACCTCTTCTCTTTTTCAACAGACCCCAAACTT...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp TATCTAGGAGAAGTTTGGGGTCTGTTGAAAAAGAGAAGAGGTTTGCAAATATCCATTTCCAGAAACTTCTaGCCATCTCAGTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: YLGEVWGLLKKRRGLQISISRNF*PSQLHC
Trigger: ACAGTGCAACTGAGATGGTCAGAAGTTTCTGGAAAT...GGATATTTGCAAACCTCTTCTCTTTTTCAACAGACCCCAAACTTCTCCTAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGGCAGGGTTTATCTGTAGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTGCTCTAGACTTGCCTaGTTTAACTTTGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: RQGLSVVKLEHTLVVSVCCSRLA*FNFETS
Trigger: ACTGGTTTCAAAGTTAAATCAGGCAAGTCTAGAGCA...ACAAACACTCACAACAAGGGTGTGCTCTAATTTTACTACAGATAAACCCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTACTTGGAAAGCACGTCTaGTTCCTTGAGCAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLLGKHV*FLEQLD
Trigger: ATCAAGCTGCTCAAGGAAGCAGACGTGCTTTCCAAG...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR GCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAAAGAACTCTGTCTCCTaGAGTTTACTGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLKNSVS*SLLSPT
Trigger: TGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTT...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR GCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAACATTGTGTTGTAATTaGGGTAACGGTGTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLTLCCN*GNGVPA
Trigger: AGCGGGGACACCGTTACCGCAATTACAACACAATGT...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR CCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCCGAGGACCATTTTCATaGAGCAAATCCATTTTATGT +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLRGPFS*SKSILC
Trigger: ACATAAAATGGATTTGCTCCATGAAAATGGTCCTCG...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp CAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTCGAGGACCATTTTCATaGAGCAAATCCATTTTATGT +
Preference number: 4 (lower is better)
Translates to: QSLEMSCLPQSQEIPSLARGPFS*SKSILC
Trigger: ACATAAAATGGATTTGCTCCATGAAAATGGTCCTCG...AGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTATTTAGCTTCATCGTGTaGAGCGCATCATGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLFSFIV*SASWLG
Trigger: ACCAAGCCATGATGCGCTCCACACGATGAAGCTAAA...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCCATCTTCACCCACTTTaGCTTATAAGGATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIHLHPL*LIRILW
Trigger: CCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATG...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCGTTGAACATCCACAGTaGGACACTCATCATAAACTC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIVEHPQ*DTHHKL
Trigger: GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAAC...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp CAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTGAACCTTCATTAGATTaGCAAACAAAACTTGCACAG +
Preference number: 4 (lower is better)
Translates to: QSLEMSCLPQSQEIPSLAEPSLD*QTKLAQ
Trigger: CTGTGCAAGTTTTGTTTGCCAATCTAATGAAGGTTC...AGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCCGATTCTTCTATGCTTaGGTTCGTTTTATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIRFFYA*VRFIGV
Trigger: GACTCCTATAAAACGAACTCAAGCATAGAAGAATCG...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR TCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCACCTTTGATAAGAGCTaGGATTGGGTAGTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLITFDKS*DWVVKR
Trigger: TCTTTTCACTACCCAATCTCAGCTCTTATCAAAGGT...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR GCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCAGGAGTCTTATTACATaGACGTTTACATTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIRSLIT*TFTFLP
Trigger: GGGAAGGAATGTAAACGTGCATGTAATAAGACTCCT...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR GCA 90 bp GAGTACCCACATTTGAAGAAAGGGGTCAGCCATCAGAAGCTTGATTTCATATTTCCTACGATTCTTCTATaGTTGAGTTCGTTTTATAGG +
Preference number: 4 (lower is better)
Translates to: EYPHLKKGVSHQKLDFIFPTILL*LSSFYR
Trigger: CCTATAAAACGAACTCAAGCATAGAAGAATCGTAGG...AAATATGAAATCAAGCTTCTGATGGCTGACCCCTTTCTTCAAATGTGGGTACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp CAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTATACATACCTGTTCCTaGAGCTCCTTTTTAAAATTC +
Preference number: 4 (lower is better)
Translates to: QSLEMSCLPQSQEIPSLAIHTCS*SSFLKF
Trigger: GAATTTTAAAAAGGAGCTGCAGGAACAGGTATGTAT...AGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR GCA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTCCCTGTGTCTAAACTaGCTGATAAACAATCTTTTA +
Preference number: 4 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLSLCLN*LINNLL
Trigger: TAAAAGATTGTTTATCAGGCAGTTTAGACACAGGGA...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp TTCACATTTTGTTACCCAAAGATAACTCATGACAGCACATCTATTCTGGGCACTAGGACAGTGGACAAATaGTTGACATTATCAGCTATG +
Preference number: 4 (lower is better)
Translates to: FTFCYPKITHDSTSILGTRTVDK*LTLSAM
Trigger: CATAGCTGATAATGTCAAGCATTTGTCCACTGTCCT...AGTGCCCAGAATAGATGTGCTGTCATGAGTTATCTTTGGGTAACAAAATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAGAGCGCATCATGGCTTaGTTTGGTCTCATAGTCAAT +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLERIMA*FGLIVN
Trigger: ATTGACTATGAGACCAAACCAAGCCATGATGCGCTC...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCCTTATAAGGATTCTGTaGTTTCTGGAGTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLILIRIL*FLEFPL
Trigger: GAGAGGAAACTCCAGAAACCACAGAATCCTTATAAG...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp GTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACCATCTTCACCCACTTTaGCTTATAAGGATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VKLEHTLVVSVCCFAISNHLHPL*LIRILW
Trigger: CCACAGAATCCTTATAAGCCAAAGTGGGTGAAGATG...GTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AAGATTAAAATGACCATCCTTCCTGTCTTAGCTTTCCAATCTGAAGAAGACAATATTCAATATGCAAGGTaGAGGGCTTTCAGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: KIKMTILPVLAFQSEEDNIQYAR*RAFRSL
Trigger: AAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAAT...ATTGTCTTCTTCAGATTGGAAAGCTAAGACAGGAAGGATGGTCATTTTAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp GAGTACCCACATTTGAAGAAAGGGGTCAGCCATCAGAAGCTTGATTTCATATTTTATCTAGGAGAAGTTTaGGGTCTGTTGAAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: EYPHLKKGVSHQKLDFIFYLGEV*GLLKKR
Trigger: TCTCTTTTTCAACAGACCCCAAACTTCTCCTAGATA...AAATATGAAATCAAGCTTCTGATGGCTGACCCCTTTCTTCAAATGTGGGTACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp ATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTTATGTAACCAGCTTTTGTaGCAACTGTTACTGTTGATT +
Preference number: 4 (lower is better)
Translates to: IFRDVMSTTKPGDSKSCLCNQLL*QLLLLI
Trigger: AATCAACAGTAACAGTTGCCACAAAAGCTGGTTACA...TAAGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGGCAGGGTTTATCTGTAGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTCAGAAACACTCAGATaGAATTCACACTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RQGLSVVKLEHTLVVSVCSETLR*NSHLFC
Trigger: ACAGAACAAGTGTGAATTCCATCTGAGTGTTTCTGA...ACAAACACTCACAACAAGGGTGTGCTCTAATTTTACTACAGATAAACCCTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 72 bp GGAGAAGTTTGGGGTCTGTTGAAAAAGAGAAGAGGTTaGCAAATATCCTCATTAGAGTACTATGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: GEVWGLLKKRRG*QISSLEYYASV
Trigger: AACACTTGCATAGTACTCTAATGAGGATATTTGCAAACCTCTTCTCTTTTTCAACAGACCCCAAACTTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR GCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCCCTACGATTCTTCTATaGTTGAGTTCGTTTTATAGG +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIPTILL*LSSFYR
Trigger: CCTATAAAACGAACTCAAGCATAGAAGAATCGTAGG...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCTTTTTAAAAGCTTCGTaGGTTCCTTCATTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIFLKAS*VPSFLS
Trigger: GGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAA...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCCGAGGACCATTTTCATaGAGCAAATCCATTTTATGT +
Preference number: 4 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIRGPFS*SKSILC
Trigger: ACATAAAATGGATTTGCTCCATGAAAATGGTCCTCG...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CCA 90 bp AAATTGTTCCAAGAATGGTGGAATAGCATGAGTAGCTGTCCAATCTTTAGAGATCATCATGGCTTGGTTTaGTCTCATAGTCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: KLFQEWWNSMSSCPIFRDHHGLV*SHSQCQ
Trigger: TTGACATTGACTATGAGACCAAACCAAGCCATGATG...ATCTCTAAAGATTGGACAGCTACTCATGCTATTCCACCATTCTTGGAACAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp TTCACATTTTGTTACCCAAAGATAACTCATGACAGCACATCTATTCTGGGCACTTGTAAGAGAACTATTTaGGTTTGTCAGGGTCATAAC +
Preference number: 4 (lower is better)
Translates to: FTFCYPKITHDSTSILGTCKRTI*VCQGHN
Trigger: GTTATGACCCTGACAAACCCAAATAGTTCTCTTACA...AGTGCCCAGAATAGATGTGCTGTCATGAGTTATCTTTGGGTAACAAAATGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAGAAAAGAGGTTTATTTaGCTCATGGTTCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLEKRFI*LMVLQA
Trigger: AGCCTGCAGAACCATGAGCCAAATAAACCTCTTTTC...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR CCA 90 bp ATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTTACATCTTCACCCACTTTaGCTTATAAGGATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: IFRDVMSTTKPGDSKSCLHLHPL*LIRIKS
Trigger: ACTTTTAATCCTTATAAGCCAAAGTGGGTGAAGATG...TAAGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510328.5
3UTR CAA 72 bp AGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTaGCTTTGCAATATCAAACAGTGCTTAACCTTTGTC +
Preference number: 4 (lower is better)
Translates to: SKIRAHPCCECL*LCNIKQCLTFV
Trigger: GACAAAGGTTAAGCACTGTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR TCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAAGTCACACCACCCTTTaGACAATTATCCTTGGAATA +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLSHTTL*TIILGI
Trigger: TATTCCAAGGATAATTGTTCAAAGGGTGGTGTGACT...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTACATCATGGCTTGGTTTaGTCTCATAGTCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLHHGLV*SHSQCQ
Trigger: TTGACATTGACTATGAGACCAAACCAAGCCATGATG...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR GCA 90 bp GTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACCTCATTAGAGTACTATaGAAGTGTTGCATCACTATT +
Preference number: 4 (lower is better)
Translates to: VKLEHTLVVSVCCFAISNLIRVL*KCCITI
Trigger: AATAGTGATGCAACACTTGCATAGTACTCTAATGAG...GTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CCA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTATTTTTAAAAGCTTCGTaGGTTCCTTCATTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RQRNSQVRSNKICLIILLFLKAS*VPSFLS
Trigger: GGAAAGGAATGAAGGAACCCACGAAGCTTTTAAAAA...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
3UTR CAA 72 bp TGTAGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTaGTTGCTTTGCAATATCAAACAGTGCTTAACCTTT +
Preference number: 4 (lower is better)
Translates to: CSKIRAHPCCEC*LLCNIKQCLTF
Trigger: AAAGGTTAAGCACTGTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
3UTR CAA 72 bp GGTGTGATTTATAAAAATTATTGTAGAACAATTCCATaGTTATGCATCCTCCCTGTGTCTAAACTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: GVIYKNYCRTIP*LCILPVSKLPD
Trigger: ATCAGGCAGTTTAGACACAGGGAGGATGCATAACAATGGAATTGTTCTACAATAATTTTTATAAATCACACC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS TCA 90 bp CCCCAGCGCGTGGCCCATGGGAGGCCCTCAGACCTATCTGCGGAATaGGTAAATGAGTGTGTGAACCAGGTTCGGCAATTTCGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: PQRVAHGRPSDLSAE*VNECVNQVRQFRWG
Trigger: GCCCCACCGAAATTGCCGAACCTGGTTCACACACTCATTTACTCATTCCGCAGATAGGTCTGAGGGCCTCCCATGGGCCACGCGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS TCA 90 bp CGTGGCCCATGGGAGGCCCTCAGACCTATCTGCGGAATGAGTAAATaGGTGTGTGAACCAGGTTCGGCAATTTCGGTGGGGCGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: RGPWEALRPICGMSK*VCEPGSAISVGRAL
Trigger: CAGCGCTCGCCCCACCGAAATTGCCGAACCTGGTTCACACACTCATTTACTCATTCCGCAGATAGGTCTGAGGGCCTCCCATGGGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS CCA 90 bp AGTGCAAGGCGGGCAGCCCTTCCTGAAGTCGTCCAGCCCCTTTCTTaGAAATACCAACTGCCGGCTGTGCAGAGAGGTGGGGAACTTCAG +
Preference number: 5 (lower is better)
Translates to: SARRAALPEVVQPLS*KYQLPAVQRGGELQ
Trigger: CTGAAGTTCCCCACCTCTCTGCACAGCCGGCAGTTGGTATTTCCAAGAAAGGGGCTGGACGACTTCAGGAAGGGCTGCCCGCCTTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000515589.1
CDS GCA 90 bp CAGCCCTTCCTGAAGTCGTCCAGCCCCTTTCTTGGAAATACCAACTaGCGGCTGTGCAGAGAGGTGGGGAACTTCAGCCCGTTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: QPFLKSSSPFLGNTN*RLCREVGNFSPFLC
Trigger: GCACAAGAACGGGCTGAAGTTCCCCACCTCTCTGCACAGCCGGCAGTTGGTATTTCCAAGAAAGGGGCTGGACGACTTCAGGAAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000515589.1
CDS GCA 90 bp CAAGACGCACGGCACAGACATCTGCATTGGATGAGGGCCTCAGGCTaGTTCCACTCCGTTTCCTTCTCCGTGAAATGCCTCCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: QDARHRHLHWMRASG*FHSVSFSVKCLLLP
Trigger: AGGGAGGAGGAGGCATTTCACGGAGAAGGAAACGGAGTGGAAGCAGCCTGAGGCCCTCATCCAATGCAGATGTCTGTGCCGTGCGTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR CAA 90 bp TTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCGAGAGCCCCGTTGCATaGCGGGCTGCTGGCCAGATC +
Preference number: 5 (lower is better)
Translates to: FNMQGGGLSGAFVLRRRVESPVA*RAAGQI
Trigger: GATCTGGCCAGCAGCCCGCAATGCAACGGGGCTCTC...GACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS CCA 90 bp CCCTTACGTGACAAACTTATGCATCCCCCAGGCCCCAGTTCAATGTaGGGCCCTAGGTCATCCAGGCAGAACATGCTTGCTGGCATGATC +
Preference number: 5 (lower is better)
Translates to: PLRDKLMHPPGPSSM*GPRSSRQNMLAGMI
Trigger: GATCATGCCAGCAAGCATGTTCTGCCTGGATGACCTAGGGCCCCACATTGAACTGGGGCCTGGGGGATGCATAAGTTTGTCACGTAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510197.5
ENST00000512895.5
CDS GCA 90 bp CTCAGCAGGCACCTGGTAGAAGCACTTGCTACATTGTGTTGTAATTaGGGTAACGGTGTCCCCGCTAACTTGCGAGCGCCTCTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: LSRHLVEALATLCCN*GNGVPANLRAPLEQ
Trigger: CTGCTCTAGAGGCGCTCGCAAGTTAGCGGGGACACCGTTACCGCAATTACAACACAATGTAGCAAGTGCTTCTACCAGGTGCCTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510197.5
ENST00000512895.5
CDS-3UTR CAA 90 bp CAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTCCAAGCCACAGCTCTTaGTCCTTAGACCAGGACGCA +
Preference number: 5 (lower is better)
Translates to: QGGGLSGAFVLRRRVWFSPSHSS*SLDQDA
Trigger: TGCGTCCTGGTCTAAGGACAAAGAGCTGTGGCTTGG...ACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp GCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCCAAAGGGGGACCACATaGTGTGGAGATGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: AEFNMQGGGLSGAFVLRRQRGTT*CGDAGA
Trigger: GGCCCCAGCATCTCCACACAATGTGGTCCCCCTTTG...GCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS TCA 90 bp CAATGTGGGGCCCTAGGTCATCCAGGCAGAACATGCTTGCTGGCATaGTCTCAGCAGGCACCTGGTAGAAGCACTTGCTACATTGTGTTG +
Preference number: 5 (lower is better)
Translates to: QCGALGHPGRTCLLA*SQQAPGRSTCYIVL
Trigger: CAACACAATGTAGCAAGTGCTTCTACCAGGTGCCTGCTGAGATCATGCCAGCAAGCATGTTCTGCCTGGATGACCTAGGGCCCCACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510197.5
ENST00000512895.5
CDS GCA 90 bp CTGAAGTCGTCCAGCCCCTTTCTTGGAAATACCAACTGCCGGCTGTaGAGAGAGGTGGGGAACTTCAGCCCGTTCTTGTGCTTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: LKSSSPFLGNTNCRL*REVGNFSPFLCFVK
Trigger: TTTCACAAAGCACAAGAACGGGCTGAAGTTCCCCACCTCTCTGCACAGCCGGCAGTTGGTATTTCCAAGAAAGGGGCTGGACGACTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000515589.1
CDS-3UTR CAA 90 bp CAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGCCATTGGCCTGCGTTaGACACAGACGTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: QYARWRAFRSLCITPQSLAIGLR*TQTSSW
Trigger: CCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGC...CAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CAA 90 bp ACAGCACATCTATTCTGGGCACTGAGGTGGTCGTACCAAGTCACACCACCCTTTAAAGACAATGCCAGGTaGGGCTGCCAGAACGAGCCA +
Preference number: 5 (lower is better)
Translates to: TAHLFWALRWSYQVTPPFKDNAR*GCQNEP
Trigger: TGGCTCGTTCTGGCAGCCCAACCTGGCATTGTCTTT...AAAGGGTGGTGTGACTTGGTACGACCACCTCAGTGCCCAGAATAGATGTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp CAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGGCTTTCAGGAGCCTTaGTATTACGCCGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: QYARWRAFRSLCITPQSLGFQEP*YYAAES
Trigger: AGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCC...CAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS TCA 90 bp TGCAGTTTACTGAGCCCCACACTACGCTTTAGCTCCAGAGGAACCTaGTTTAGCTTCATCGTGTGGAGCGCATCATGGCTTGGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: CSLLSPTLRFSSRGT*FSFIVWSASWLGLV
Trigger: GACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS CCA 90 bp CACCCCAACCACCTTGGGCACATGTTCTCAGGATCTCCTGAGGGCTaGGTTATAGGCCACGGTCACTCATATTTGGCTCAGAATAAATCT +
Preference number: 5 (lower is better)
Translates to: HPNHLGHMFSGSPEG*VIGHGHSYLAQNKS
Trigger: AGATTTATTCTGAGCCAAATATGAGTGACCGTGGCCTATAACCCAGCCCTCAGGAGATCCTGAGAACATGTGCCCAAGGTGGTTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515589.1
CDS-3UTR CAA 90 bp GCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCTTCCAGGGGCCTGTCTaGGTATGTGCCTGTAAGAGA +
Preference number: 5 (lower is better)
Translates to: AEFNMQGGGLSGAFVLRRFQGPV*VCACKR
Trigger: TCTCTTACAGGCACATACCAAGACAGGCCCCTGGAA...GCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCCGTCCAGCCCCTTTCTaGGAAATACCAACTGCCGGC +
Preference number: 5 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLRPAPF*EIPTAG
Trigger: GCCGGCAGTTGGTATTTCCAAGAAAGGGGCTGGACG...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR CAA 90 bp GGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGACAGTGGACAAATGCTaGACATTATCAGCTATGACT +
Preference number: 5 (lower is better)
Translates to: GLSGAFVLRRRVWFSRRVTVDKC*TLSAMT
Trigger: AGTCATAGCTGATAATGTCAAGCATTTGTCCACTGT...CACCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp CAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTGTTTGTAACCAGCTTTaGTGGCAACTGTTACTGTTG +
Preference number: 5 (lower is better)
Translates to: QGGGLSGAFVLRRRVWFSVCNQL*WQLLLL
Trigger: CAACAGTAACAGTTGCCACAAAAGCTGGTTACAAAC...ACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCGGTGTCCCCGCTAACTaGCGAGCGCCTCTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIGVPAN*RAPLEQ
Trigger: CTGCTCTAGAGGCGCTCGCAAGTTAGCGGGGACACC...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS TCA 90 bp TCTCATAGCCTAGTTTCTGGAAGAACTCTGTCTCCTGCAGTTTACTaGGCCCCACACTACGCTTTAGCTCCAGAGGAACCTGATTTAGCT +
Preference number: 5 (lower is better)
Translates to: SHSLVSGRTLSPAVY*APHYALAPEEPDLA
Trigger: AGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTAGGCTATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS TCA 90 bp AGTAACTCCTCCTGTTCCTGCAGCTCCTTTTTAAAATTCTCCTCTTaGGCCTTATGTGAGACCTCAGGGTCAACCAGAGGCTCGTCTACT +
Preference number: 5 (lower is better)
Translates to: SNSSCSCSSFLKFSS*ALCETSGSTRGSST
Trigger: AGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGGAGGAGTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000510197.5
CDS-3UTR CAA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGCCATTGGCCTGCGTTaGACACAGACGTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLAIGLR*TQTSSW
Trigger: CCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CAA 90 bp CAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTGCCATTGGCCTGCGTTaGACACAGACGTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: QSLEMSCLPQSQEIPSLAAIGLR*TQTSSW
Trigger: CCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGC...AGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CAA 90 bp AGTAGCTGTCCAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCGCACTTCCAGCACCTTaGATAAGAGCTGGACCTGCA +
Preference number: 5 (lower is better)
Translates to: SSCPIFRDVMSTTKPGDSALPAP*IRAGPA
Trigger: TGCAGGTCCAGCTCTTATCAAAGGTGCTGGAAGTGC...GGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTGGACAGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CAA 90 bp AGTAGCTGTCCAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCGGCTTTCAGGAGCCTTaGTATTACGCCGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: SSCPIFRDVMSTTKPGDSGFQEP*YYAAES
Trigger: AGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCC...GGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTGGACAGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CAA 90 bp CCTTTGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGGCAGATGCACTGTTTATCTAGGAGAAGTTaGGGGTCTGTTGAAAAAGAG +
Preference number: 5 (lower is better)
Translates to: PLYYAAESGSVGGWQMHCLSRRS*GSVEKE
Trigger: CTCTTTTTCAACAGACCCCAAACTTCTCCTAGATAA...ACAGTGCATCTGCCACCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp GCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAAAGAGTACCCACATTaGAAGAAAGGGGTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: AEFNMQGGGLSGAFVLRRKEYPH*KKGVSH
Trigger: ATGGCTGACCCCTTTCTTCAAATGTGGGTACTCTTT...GCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp CAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGTCTGGTTCAGTCTAGCAGACCTAGTATaGATGTTCAAAGCTAAAGGA +
Preference number: 5 (lower is better)
Translates to: QGGGLSGAFVLRRRVWFSLADLV*MFKAKG
Trigger: TCCTTTAGCTTTGAACATCAATACTAGGTCTGCTAG...ACTGAACCAGACTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS TCA 90 bp TTCTCAAGGAACTGTTCCTGCAGCTCCTTTTTAAAATTCTCCTCTTaGGCCTTATGTGAGACCTCAGGGTCAACCAGAGGCTCGTCTACT +
Preference number: 5 (lower is better)
Translates to: FSRNCSCSSFLKFSS*ALCETSGSTRGSST
Trigger: AGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAGTTCCTTGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511946.1
CDS TCA 90 bp AGCTTCCGGTCAGGATCAAGCACTTCCAGCACCTTTGATAAGAGCTaGGATTGGGTAGTGAAAAGAGGTTTATTTGGCTCATGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: SFRSGSSTSSTFDKS*DWVVKRGLFGSWFC
Trigger: GCAGAACCATGAGCCAAATAAACCTCTTTTCACTACCCAATCTCAGCTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGACCGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR CAA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGCTTCCTTGAGCAGCTaGATCTGCCTCTTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLASLSS*ICLFFG
Trigger: CCCAAAGAAGAGGCAGATCAAGCTGCTCAAGGAAGC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR CAA 90 bp CCTTTGTATTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGGCAGATGCACTGTTCTCATGCTCTAGACTaGCCTGATTTAACTTTGAAA +
Preference number: 5 (lower is better)
Translates to: PLYYAAESGSVGGWQMHCSHALD*PDLTLK
Trigger: TTTCAAAGTTAAATCAGGCAAGTCTAGAGCATGAGA...ACAGTGCATCTGCCACCCTCCTACTGAACCAGACTCTGCGGCGTAATACAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAAATGTCCCAGCCACCTaGAATCCCCAGCGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: RQRNSQVRSNKICLIILLNVPAT*NPQRVA
Trigger: GGCCACGCGCTGGGGATTCAAGGTGGCTGGGACATT...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS TCA 90 bp ATCCATTTTATGTGGCTTTTCTTCATAAAGCCATTGGCCTGCGTTTaGCACAGACGTCTTCTTGGAAGGTCCCAGGTAGACTTGGGTAGA +
Preference number: 5 (lower is better)
Translates to: IHFMWLFFIKPLACV*HRRLLGRSQVDLGR
Trigger: TCTACCCAAGTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
ENST00000510328.5
ENST00000512895.5
ENST00000606246.1
CDS TCA 90 bp CTGTTCCTGCAGCTCCTTTTTAAAATTCTCCTCTTGAGCCTTATGTaGGACCTCAGGGTCAACCAGAGGCTCGTCTACTCTTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: LFLQLLFKILLLSLM*DLRVNQRLVYSLLF
Trigger: AAAAAGCAAAGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTGCAGGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
ENST00000510328.5
ENST00000511946.1
CDS CCA 90 bp GCAGCCATTAATAATCACTCACCATTTCCCCATTTCCCTCGCTCCTaGCAACAACTAACCTACTTTTCTGTCTCCGTAGATTTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: AAINNHSPFPHFPRS*QQLTYFSVSVDLPV
Trigger: AACAGGCAAATCTACGGAGACAGAAAAGTAGGTTAGTTGTTGCCAGGAGCGAGGGAAATGGGGAAATGGTGAGTGATTATTAATGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS-3UTR CAA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGGAGCGCATCATGGCTaGGTTTGGTCTCATAGTCAA +
Preference number: 5 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLGAHHG*VWSHSQ
Trigger: TTGACTATGAGACCAAACCAAGCCATGATGCGCTCC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CAA 90 bp ATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTTATTACACATTCTCCTTGCACTTCCAGCACCTTaGATAAGAGCTGGACCTGCA +
Preference number: 5 (lower is better)
Translates to: MSTTKPGDSKSCLLHILLALPAP*IRAGPA
Trigger: TGCAGGTCCAGCTCTTATCAAAGGTGCTGGAAGTGC...AAGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CAA 90 bp GCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAAGTCACACCACCCTTaGAACAATTATCCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: AEFNMQGGGLSGAFVLRRKSHHP*NNYPWN
Trigger: ATTCCAAGGATAATTGTTCAAAGGGTGGTGTGACTT...GCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CAA 90 bp GAAACACTCAGATGGAATTCACACTTGTTCTGTGCCCAAGTCTGGCCCAGCCCATCAGCCATCAGAAGCTaGATTTCATATTTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: ETLRWNSHLFCAQVWPSPSAIRS*ISYLFS
Trigger: TGAGAACAAATATGAAATCAAGCTTCTGATGGCTGA...TGGGCTGGGCCAGACTTGGGCACAGAACAAGTGTGAATTCCATCTGAGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp ATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTTATTACACATTCTCCTTGTGCAGTCAGGGAGGTaGCACATCACCAACATTCCT +
Preference number: 5 (lower is better)
Translates to: MSTTKPGDSKSCLLHILLVQSGR*HITNIP
Trigger: AGGAATGTTGGTGATGTGCAACCTCCCTGACTGCAC...AAGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS TCA 90 bp TCAGTAGGAGGGTGGCAGATGCACTGTGATCATCTGAAGCTCAGATaGTCAAATCTCAGTATAAATACATACCTGTTCCTGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: SVGGWQMHCDHLKLR*SNLSINTYLFLQLL
Trigger: AAGGAGCTGCAGGAACAGGTATGTATTTATACTGAGATTTGATCATCTGAGCTTCAGATGATCACAGTGCATCTGCCACCCTCCTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS TCA 90 bp TTACGCCGCAGAGTCTGGTTCAGTAGGAGGGTGGCAGATGCACTGTaGTCATCTGAAGCTCAGATGATCAAATCTCAGTATAAATACATA +
Preference number: 5 (lower is better)
Translates to: LRRRVWFSRRVADAL*SSEAQMIKSQYKYI
Trigger: TATGTATTTATACTGAGATTTGATCATCTGAGCTTCAGATGATCACAGTGCATCTGCCACCCTCCTACTGAACCAGACTCTGCGGCGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CAA 90 bp AATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTACGCCGCAGAGAAGTCACACCACCCTTaGAACAATTATCCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: NSICKVEGFQEPLYYAAEKSHHP*NNYPWN
Trigger: ATTCCAAGGATAATTGTTCAAAGGGTGGTGTGACTT...CTCTGCGGCGTAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CAA 90 bp GGCATACTCCCTTCTGAGAATTTCTGGTCTAACTGGTTGTCTAGCTTCACCTCCAAATATTGTAGGGTTTaGAGTGACAGGTGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: GILPSENFWSNWLSSFTSKYCRV*SDRCSQ
Trigger: CTGAGAACACCTGTCACTCAAAACCCTACAATATTT...GGAGGTGAAGCTAGACAACCAGTTAGACCAGAAATTCTCAGAAGGGAGTATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAAGCACGTCTGCTTCCTaGAGCAGCTTGATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RQRNSQVRSNKICLIILLSTSAS*SSLICL
Trigger: GAGGCAGATCAAGCTGCTCAAGGAAGCAGACGTGCT...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR CAA 90 bp TCTTGTGTGTGTCTATTATTTCTCAACCTGCCAATCCGCCTGGGAACAGAGAGCACGATTCTTCTATGCTaGAGTTCGTTTTATAGGAGT +
Preference number: 5 (lower is better)
Translates to: SCVCLLFLNLPIRLGTESTILLC*SSFYRS
Trigger: ACTCCTATAAAACGAACTCAAGCATAGAAGAATCGT...GCTCTCTGTTCCCAGGCGGATTGGCAGGTTGAGAAATAATAGACACACACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp CTCCTTGCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTAGAAGTTTGGGGTCTGTaGAAAAAGAGAAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: LLAEFNMQGGGLSGAFVLEVWGL*KKRRGL
Trigger: CAAACCTCTTCTCTTTTTCAACAGACCCCAAACTTC...TAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGCAAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp ACAGTGGACAAATGCTTGACATTATCAGCTATGACTTCAGCCCCAGATGCCTATGATAGATGTTGGTCTTaGGAAGGTAGTCACACAGTA +
Preference number: 5 (lower is better)
Translates to: TVDKCLTLSAMTSAPDAYDRCWS*EGSHTV
Trigger: TACTGTGTGACTACCTTCCAAAGACCAACATCTATC...ATAGGCATCTGGGGCTGAAGTCATAGCTGATAATGTCAAGCATTTGTCCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCGCACTTCCAGCACCTTaGATAAGAGCTGAGATTGGG +
Preference number: 5 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIALPAP*IRAEIG
Trigger: CCCAATCTCAGCTCTTATCAAAGGTGCTGGAAGTGC...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR CAA 90 bp CTCCTTGCTGAATTCAATATGCAAGGTGGAGGGCTTTCAGGAGCCTTTGTATTAAAAGTAGTAACCCACTaGCAGAAGTCACTAACTGCT +
Preference number: 5 (lower is better)
Translates to: LLAEFNMQGGGLSGAFVLKVVTH*QKSLTA
Trigger: AGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTT...TAATACAAAGGCTCCTGAAAGCCCTCCACCTTGCATATTGAATTCAGCAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510328.5
CDS TCA 90 bp GCCCAAATTACTGTGCTTGAAGTCTACCAAAGCCTCAGGCAACCTTaGCAAGTAGGAGTCATCCTTGACTTCTCTAACATTCTTAAAATC +
Preference number: 5 (lower is better)
Translates to: AQITVLEVYQSLRQP*QVGVILDFSNILKI
Trigger: GATTTTAAGAATGTTAGAGAAGTCAAGGATGACTCCTACTTGTCAAGGTTGCCTGAGGCTTTGGTAGACTTCAAGCACAGTAATTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS CCA 90 bp TCCTTGACTTCTCTAACATTCTTAAAATCCAGCTCAGTTAAGGTCTaGCAGATTGTAACTGTCTCCTTCTCTGGACTGCTGCAAAATGCT +
Preference number: 5 (lower is better)
Translates to: SLTSLTFLKSSSVKV*QIVTVSFSGLLQNA
Trigger: AGCATTTTGCAGCAGTCCAGAGAAGGAGACAGTTACAATCTGCCAGACCTTAACTGAGCTGGATTTTAAGAATGTTAGAGAAGTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS-3UTR CAA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTCATCTTCACCCACTTaGGCTTATAAGGATTCTGTG +
Preference number: 5 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLSSSPT*AYKDSV
Trigger: CACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGA...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CAA 90 bp AGGCAGGGTTTATCTGTAGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTACATAGACCTCCTATaGAGGCCAAATCCAAGGAAG +
Preference number: 5 (lower is better)
Translates to: RQGLSVVKLEHTLVVSVCYIDLL*RPNPRK
Trigger: CTTCCTTGGATTTGGCCTCAATAGGAGGTCTATGTA...ACAAACACTCACAACAAGGGTGTGCTCTAATTTTACTACAGATAAACCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp TATCTAGGAGAAGTTTGGGGTCTGTTGAAAAAGAGAAGAGGTTTGCAAATATCCAGTAACAGTTGGAATTaGCAAGGCCCATGCCCTGTA +
Preference number: 5 (lower is better)
Translates to: YLGEVWGLLKKRRGLQISSNSWN*QGPCPV
Trigger: TACAGGGCATGGGCCTTGCAAATTCCAACTGTTACT...GGATATTTGCAAACCTCTTCTCTTTTTCAACAGACCCCAAACTTCTCCTAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCGAAGCACTTGCTACATaGTGTTGTAATTGCGGTAAC +
Preference number: 5 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLEALAT*CCNCGN
Trigger: GTTACCGCAATTACAACACAATGTAGCAAGTGCTTC...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR CAA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCAACTTCAGCCCGTTCTaGTGCTTTGTGAAACATCTG +
Preference number: 5 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLINFSPF*CFVKHL
Trigger: CAGATGTTTCACAAAGCACAAGAACGGGCTGAAGTT...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR CAA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAGCACTTCCAGCACCTTaGATAAGAGCTCTATGGGCA +
Preference number: 5 (lower is better)
Translates to: RQRNSQVRSNKICLIILLALPAP*IRALWA
Trigger: TGCCCATAGAGCTCTTATCAAAGGTGCTGGAAGTGC...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS-3UTR CAA 90 bp AAGATTAAAATGACCATCCTTCCTGTCTTAGCTTTCCAATCTGAAGAAGACAATGGAGCGCATCATGGCTaGGTTTGGTCTCATAGTCAA +
Preference number: 5 (lower is better)
Translates to: KIKMTILPVLAFQSEEDNGAHHG*VWSHSQ
Trigger: TTGACTATGAGACCAAACCAAGCCATGATGCGCTCC...ATTGTCTTCTTCAGATTGGAAAGCTAAGACAGGAAGGATGGTCATTTTAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAGGAGCGCATCATGGCTaGGTTTGGTCTCATAGTCAA +
Preference number: 5 (lower is better)
Translates to: RQRNSQVRSNKICLIILLGAHHG*VWSHSQ
Trigger: TTGACTATGAGACCAAACCAAGCCATGATGCGCTCC...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CAA 90 bp TGTTCAAAGCTAAAGGAGTTCCTCCAAACCAGTTCTATAATGGAGTTTCCCAGTTCATCTTCACCCACTTaGGCTTATAAGGATTCTGTG +
Preference number: 5 (lower is better)
Translates to: CSKLKEFLQTSSIMEFPSSSSPT*AYKDSV
Trigger: CACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGA...ACTGGGAAACTCCATTATAGAACTGGTTTGGAGGAACTCCTTTAGCTTTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp ACAGTGGACAAATGCTTGACATTATCAGCTATGACTTCAGCCCCAGATGCCTATCCTTGTTGTGAGTGTTaGTTGCTTTGCAATATCAAA +
Preference number: 5 (lower is better)
Translates to: TVDKCLTLSAMTSAPDAYPCCEC*LLCNIK
Trigger: TTTGATATTGCAAAGCAACAAACACTCACAACAAGG...ATAGGCATCTGGGGCTGAAGTCATAGCTGATAATGTCAAGCATTTGTCCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp GTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTGCTTTGCAATATCAAACAGATGGAATTCACACTaGTTCTGTGCCCAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: VKLEHTLVVSVCCFAISNRWNSH*FCAQVW
Trigger: CCAGACTTGGGCACAGAACAAGTGTGAATTCCATCT...GTTTGATATTGCAAAGCAACAAACACTCACAACAAGGGTGTGCTCTAATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS TCA 90 bp CATGGCTTGGTTTGGTCTCATAGTCAATGTCAAACTGTTTCAAGATaGACTCTTCATCGATGTCCGAAATTCCATTTTCATGAAGACCAG +
Preference number: 5 (lower is better)
Translates to: HGLVWSHSQCQTVSR*TLHRCPKFHFHEDQ
Trigger: CTGGTCTTCATGAAAATGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACCAAACCAAGCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000502320.2
CDS GCA 90 bp TTTATCCATTCACAAACATATCCAGGTGATGGACTTTTGGGCTGTTaGCACTTTTTGCCTGTTAAGGACAATGCTGCTATGGATATTCAT +
Preference number: 5 (lower is better)
Translates to: FIHSQTYPGDGLLGC*HFLPVKDNAAMDIH
Trigger: ATGAATATCCATAGCAGCATTGTCCTTAACAGGCAAAAAGTGGCAACAGCCCAAAAGTCCATCACCTGGATATGTTTGTGAATGGATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS-3UTR CAA 90 bp AGATGTTGCCAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCACGATTCTTCTATGCTaGAGTTCGTTTTATAGGAGT +
Preference number: 5 (lower is better)
Translates to: RCCQVKVEHPQWDTHHKLTILLC*SSFYRS
Trigger: ACTCCTATAAAACGAACTCAAGCATAGAAGAATCGT...GAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTGGCAACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS-3UTR CAA 90 bp ATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTTATTACACATTCTCCTTAGGAGATTCCAAGTCTaGCTTATTACACATTCTCCT +
Preference number: 5 (lower is better)
Translates to: MSTTKPGDSKSCLLHILLRRFQV*LITHSP
Trigger: AGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCT...AAGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CAA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCTGTAGAACAATTCCATaGTTATGCATCCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLICRTIP*LCILPV
Trigger: CACAGGGAGGATGCATAACAATGGAATTGTTCTACA...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp CAATCTTTAGAGATGTCATGTCTACCACAAAGCCAGGAGATTCCAAGTCTTGCTAGTGCAATGATGAAATaGCAAATCCCAACGCTATTT +
Preference number: 5 (lower is better)
Translates to: QSLEMSCLPQSQEIPSLASAMMK*QIPTLF
Trigger: AAATAGCGTTGGGATTTGCAATTTCATCATTGCACT...AGCAAGACTTGGAATCTCCTGGCTTTGTGGTAGACATGACATCTCTAAAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAAATGGAATGCGACCCTaGTGGAAAGCCTATAAACGG +
Preference number: 5 (lower is better)
Translates to: RQRNSQVRSNKICLIILLNGMRP*WKAYKR
Trigger: CCGTTTATAGGCTTTCCACAAGGGTCGCATTCCATT...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp CAAGTCAAAGTTGAACATCCACAGTGGGACACTCATCATAAACTCTGTTTAATCAAAGTAGTAACCCACTaGCAGAAGTCACTAACTGCT +
Preference number: 5 (lower is better)
Translates to: QVKVEHPQWDTHHKLCLIKVVTH*QKSLTA
Trigger: AGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTT...GATTAAACAGAGTTTATGATGAGTGTCCCACTGTGGATGTTCAACTTTGACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS-3UTR CAA 90 bp TTCACATTTTGTTACCCAAAGATAACTCATGACAGCACATCTATTCTGGGCACTAGGAGATTCCAAGTCTaGCTTATTACACATTCTCCT +
Preference number: 5 (lower is better)
Translates to: FTFCYPKITHDSTSILGTRRFQV*LITHSP
Trigger: AGGAGAATGTGTAATAAGCAAGACTTGGAATCTCCT...AGTGCCCAGAATAGATGTGCTGTCATGAGTTATCTTTGGGTAACAAAATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS-3UTR CAA 90 bp AGGCAGGGTTTATCTGTAGTAAAATTAGAGCACACCCTTGTTGTGAGTGTTTGTTGTTGTGAGTGTTTGTaGCTTTGCAATATCAAACAG +
Preference number: 5 (lower is better)
Translates to: RQGLSVVKLEHTLVVSVCCCECL*LCNIKQ
Trigger: CTGTTTGATATTGCAAAGCAACAAACACTCACAACA...ACAAACACTCACAACAAGGGTGTGCTCTAATTTTACTACAGATAAACCCTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS-3UTR CAA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTATCATCTTCACCCACTTaGGCTTATAAGGATTCTGTG +
Preference number: 5 (lower is better)
Translates to: RQRNSQVRSNKICLIILLSSSPT*AYKDSV
Trigger: CACAGAATCCTTATAAGCCAAAGTGGGTGAAGATGA...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS TCA 90 bp ATCCATTTTATGTGGCTTTTCTTCATAAAGCCATTGGCCTGCGTTTaGCACAGACGTCTTCTTGGAACTAAAGATAAGATCATTAAAGAA +
Preference number: 5 (lower is better)
Translates to: IHFMWLFFIKPLACV*HRRLLGTKDKIIKE
Trigger: TTCTTTAATGATCTTATCTTTAGTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATAAAATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS GCA 90 bp ACGATTCTTCTATGCTTGAGTTCGTTTTATAGGAGTCTTATTACATaGACGTTTACATTCCTTCCCGATATACATATTCTCAAGGAAACG +
Preference number: 5 (lower is better)
Translates to: TILLCLSSFYRSLIT*TFTFLPDIHILKET
Trigger: CGTTTCCTTGAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAACGAACTCAAGCATAGAAGAATCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000510197.5
CDS GCA 90 bp ACGATTCTTCTATGCTTGAGTTCGTTTTATAGGAGTCTTATTACATaGACGTTTACATTCCTTCCCGATATACATATTCTCAAGGAACTG +
Preference number: 5 (lower is better)
Translates to: TILLCLSSFYRSLIT*TFTFLPDIHILKEL
Trigger: CAGTTCCTTGAGAATATGTATATCGGGAAGGAATGTAAACGTGCATGTAATAAGACTCCTATAAAACGAACTCAAGCATAGAAGAATCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511946.1
CDS-3UTR CAA 90 bp AAATTGTTCCAAGAATGGTGGAATAGCATGAGTAGCTGTCCAATCTTTAGAGATAGAACCTTCATTAGATaGGCAAACAAAACTTGCACA +
Preference number: 5 (lower is better)
Translates to: KLFQEWWNSMSSCPIFRDRTFIR*ANKTCT
Trigger: TGTGCAAGTTTTGTTTGCCAATCTAATGAAGGTTCT...ATCTCTAAAGATTGGACAGCTACTCATGCTATTCCACCATTCTTGGAACAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502320.2
CDS CCA 90 bp ATATTTCATCTGAATGGAACCATGCAATATGCAGTCTTTTGTGTCTaGCTTCTCTTAATTAGCATAATGTTTTCAAGGCTCATCCATGTT +
Preference number: 5 (lower is better)
Translates to: IFHLNGTMQYAVFCV*LLLISIMFSRLIHV
Trigger: AACATGGATGAGCCTTGAAAACATTATGCTAATTAAGAGAAGCCAGACACAAAAGACTGCATATTGCATGGTTCCATTCAGATGAAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS-3UTR CAA 90 bp AGACAGAGAAATAGCCAAGTACGTAGTAATAAAATCTGCCTAATCATTCTCCTAACGATTCTTCTATGCTaGAGTTCGTTTTATAGGAGT +
Preference number: 5 (lower is better)
Translates to: RQRNSQVRSNKICLIILLTILLC*SSFYRS
Trigger: ACTCCTATAAAACGAACTCAAGCATAGAAGAATCGT...TAGGAGAATGATTAGGCAGATTTTATTACTACGTACTTGGCTATTTCTCTGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS CCA 72 bp TGTCCCAGCCACCTTGAATCCCCAGCGCGTGGCCCATaGGAGGCCCTCAGACCTATCTGCGGAATGAGTAAA +
Preference number: 6 (lower is better)
Translates to: CPSHLESPARGP*EALRPICGMSK
Trigger: TTTACTCATTCCGCAGATAGGTCTGAGGGCCTCCCATGGGCCACGCGCTGGGGATTCAAGGTGGCTGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510197.5
ENST00000512895.5
CDS CCA 72 bp CAGGCTGGACAAGACGCACGGCACAGACATCTGCATTaGATGAGGGCCTCAGGCTGCTTCCACTCCGTTTCC +
Preference number: 6 (lower is better)
Translates to: QAGQDARHRHLH*MRASGCFHSVS
Trigger: GGAAACGGAGTGGAAGCAGCCTGAGGCCCTCATCCAATGCAGATGTCTGTGCCGTGCGTCTTGTCCAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS CAA 72 bp GCAGGCTGGACAAGACGCACGGCACAGACATCTGCATaGGATGAGGGCCTCAGGCTGCTTCCACTCCGTTTC +
Preference number: 6 (lower is better)
Translates to: AGWTRRTAQTSA*DEGLRLLPLRF
Trigger: GAAACGGAGTGGAAGCAGCCTGAGGCCCTCATCCAATGCAGATGTCTGTGCCGTGCGTCTTGTCCAGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS GCA 72 bp CTGAAGTCGTCCAGCCCCTTTCTTGGAAATACCAACTaGCGGCTGTGCAGAGAGGTGGGGAACTTCAGCCCG +
Preference number: 6 (lower is better)
Translates to: LKSSSPFLGNTN*RLCREVGNFSP
Trigger: CGGGCTGAAGTTCCCCACCTCTCTGCACAGCCGGCAGTTGGTATTTCCAAGAAAGGGGCTGGACGACTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000515589.1
CDS TCA 72 bp CTGGACAAGACGCACGGCACAGACATCTGCATTGGATaGGGGCCTCAGGCTGCTTCCACTCCGTTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: LDKTHGTDICIG*GPQAASTPFPS
Trigger: AGAAGGAAACGGAGTGGAAGCAGCCTGAGGCCCTCATCCAATGCAGATGTCTGTGCCGTGCGTCTTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS CAA 72 bp TTGTGTTGTAATTGCGGTAACGGTGTCCCCGCTAACTaGCGAGCGCCTCTAGAGCAGGGGAATGTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: LCCNCGNGVPAN*RAPLEQGNVPA
Trigger: GGCTGGGACATTCCCCTGCTCTAGAGGCGCTCGCAAGTTAGCGGGGACACCGTTACCGCAATTACAACACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510197.5
ENST00000512895.5
CDS GCA 72 bp CTGTGCAGAGAGGTGGGGAACTTCAGCCCGTTCTTGTaGTTTGTGAAACATCTGGACCTGCAGTTCACGCCC +
Preference number: 6 (lower is better)
Translates to: LCREVGNFSPFL*FVKHLDLQFTP
Trigger: GGGCGTGAACTGCAGGTCCAGATGTTTCACAAAGCACAAGAACGGGCTGAAGTTCCCCACCTCTCTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424749.7
CDS CCA 72 bp GACAAACTTATGCATCCCCCAGGCCCCAGTTCAATGTaGGGCCCTAGGTCATCCAGGCAGAACATGCTTGCT +
Preference number: 6 (lower is better)
Translates to: DKLMHPPGPSSM*GPRSSRQNMLA
Trigger: AGCAAGCATGTTCTGCCTGGATGACCTAGGGCCCCACATTGAACTGGGGCCTGGGGGATGCATAAGTTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510197.5
ENST00000512895.5
CDS TCA 72 bp CCCCAACCACCTTGGGCACATGTTCTCAGGATCTCCTaGGGGCTGGGTTATAGGCCACGGTCACTCATATTT +
Preference number: 6 (lower is better)
Translates to: PQPPWAHVLRIS*GLGYRPRSLIF
Trigger: AAATATGAGTGACCGTGGCCTATAACCCAGCCCTCAGGAGATCCTGAGAACATGTGCCCAAGGTGGTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515589.1
CDS TCA 72 bp TGGGAGGCCCTCAGACCTATCTGCGGAATGAGTAAATaGGTGTGTGAACCAGGTTCGGCAATTTCGGTGGGG +
Preference number: 6 (lower is better)
Translates to: WEALRPICGMSK*VCEPGSAISVG
Trigger: CCCCACCGAAATTGCCGAACCTGGTTCACACACTCATTTACTCATTCCGCAGATAGGTCTGAGGGCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS CCA 72 bp CACCTTGGGCACATGTTCTCAGGATCTCCTGAGGGCTaGGTTATAGGCCACGGTCACTCATATTTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: HLGHMFSGSPEG*VIGHGHSYLAQ
Trigger: CTGAGCCAAATATGAGTGACCGTGGCCTATAACCCAGCCCTCAGGAGATCCTGAGAACATGTGCCCAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515589.1
CDS CAA 90 bp CTTGCTACATTGTGTTGTAATTGCGGTAACGGTGTCCCCGCTAACTaGCGAGCGCCTCTAGAGCAGGGGAATGTCCCAGCCACCTTGAAT +
Preference number: 6 (lower is better)
Translates to: LATLCCNCGNGVPAN*RAPLEQGNVPATLN
Trigger: ATTCAAGGTGGCTGGGACATTCCCCTGCTCTAGAGGCGCTCGCAAGTTAGCGGGGACACCGTTACCGCAATTACAACACAATGTAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510197.5
ENST00000512895.5
CDS CAA 90 bp TGCTGGCATGATCTCAGCAGGCACCTGGTAGAAGCACTTGCTACATaGTGTTGTAATTGCGGTAACGGTGTCCCCGCTAACTTGCGAGCG +
Preference number: 6 (lower is better)
Translates to: CWHDLSRHLVEALAT*CCNCGNGVPANLRA
Trigger: CGCTCGCAAGTTAGCGGGGACACCGTTACCGCAATTACAACACAATGTAGCAAGTGCTTCTACCAGGTGCCTGCTGAGATCATGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510197.5
ENST00000512895.5
CDS TCA 72 bp CTGAGCCCCACACTACGCTTTAGCTCCAGAGGAACCTaGTTTAGCTTCATCGTGTGGAGCGCATCATGGCTT +
Preference number: 6 (lower is better)
Translates to: LSPTLRFSSRGT*FSFIVWSASWL
Trigger: AAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS GCA 72 bp CACCTGGTAGAAGCACTTGCTACATTGTGTTGTAATTaGGGTAACGGTGTCCCCGCTAACTTGCGAGCGCCT +
Preference number: 6 (lower is better)
Translates to: HLVEALATLCCN*GNGVPANLRAP
Trigger: AGGCGCTCGCAAGTTAGCGGGGACACCGTTACCGCAATTACAACACAATGTAGCAAGTGCTTCTACCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510197.5
ENST00000512895.5
CDS GCA 72 bp TGGGTAGTGAAAAGAGGTTTATTTGGCTCATGGTTCTaGAGGCTGGACAAGACGCACGGCACAGACATCTGC +
Preference number: 6 (lower is better)
Translates to: WVVKRGLFGSWF*RLDKTHGTDIC
Trigger: GCAGATGTCTGTGCCGTGCGTCTTGTCCAGCCTGCAGAACCATGAGCCAAATAAACCTCTTTTCACTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS CAA 72 bp CGGCTGTGCAGAGAGGTGGGGAACTTCAGCCCGTTCTaGTGCTTTGTGAAACATCTTTCTGGACCAAACCAA +
Preference number: 6 (lower is better)
Translates to: RLCREVGNFSPF*CFVKHLSGPNQ
Trigger: TTGGTTTGGTCCAGAAAGATGTTTCACAAAGCACAAGAACGGGCTGAAGTTCCCCACCTCTCTGCACAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515589.1
CDS CAA 72 bp GATCTCAGCAGGCACCTGGTAGAAGCACTTGCTACATaGTGTTGTAATTGCGGTAACGGTGTCCCCGCTAAC +
Preference number: 6 (lower is better)
Translates to: DLSRHLVEALAT*CCNCGNGVPAN
Trigger: GTTAGCGGGGACACCGTTACCGCAATTACAACACAATGTAGCAAGTGCTTCTACCAGGTGCCTGCTGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510197.5
ENST00000512895.5
CDS TCA 72 bp CTAGTTTCTGGAAGAACTCTGTCTCCTGCAGTTTACTaGGCCCCACACTACGCTTTAGCTCCAGAGGAACCT +
Preference number: 6 (lower is better)
Translates to: LVSGRTLSPAVY*APHYALAPEEP
Trigger: AGGTTCCTCTGGAGCTAAAGCGTAGTGTGGGGCTCAGTAAACTGCAGGAGACAGAGTTCTTCCAGAAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS CAA 90 bp ACCAACTGCCGGCTGTGCAGAGAGGTGGGGAACTTCAGCCCGTTCTaGTGCTTTGTGAAACATCTTTCTGGACCAAACCAATGTATTTCT +
Preference number: 6 (lower is better)
Translates to: TNCRLCREVGNFSPF*CFVKHLSGPNQCIS
Trigger: AGAAATACATTGGTTTGGTCCAGAAAGATGTTTCACAAAGCACAAGAACGGGCTGAAGTTCCCCACCTCTCTGCACAGCCGGCAGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515589.1
CDS TCA 72 bp ATGTGGCTTTTCTTCATAAAGCCATTGGCCTGCGTTTaGCACAGACGTCTTCTTGGAAGGTCCCAGGTAGAC +
Preference number: 6 (lower is better)
Translates to: MWLFFIKPLACV*HRRLLGRSQVD
Trigger: GTCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
ENST00000510328.5
ENST00000512895.5
ENST00000606246.1
CDS CAA 90 bp TTCCACTCCGTTTCCTTCTCCGTGAAATGCCTCCTCCTCCCTTTTTaGCACATCTTCCATTCTTGCACATGCCCCTTACGTGACAAACTT +
Preference number: 6 (lower is better)
Translates to: FHSVSFSVKCLLLPF*HIFHSCTCPLRDKL
Trigger: AAGTTTGTCACGTAAGGGGCATGTGCAAGAATGGAAGATGTGCAAAAAAGGGAGGAGGAGGCATTTCACGGAGAAGGAAACGGAGTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS CAA 90 bp GATAAGAGCGTTTCCTTCTCCGTGAAATGCCTCCTCCTCCCTTTTTaGCACATCTTCCATTCTTGCACATGCCCCTTACGTGACAAACTT +
Preference number: 6 (lower is better)
Translates to: DKSVSFSVKCLLLPF*HIFHSCTCPLRDKL
Trigger: AAGTTTGTCACGTAAGGGGCATGTGCAAGAATGGAAGATGTGCAAAAAAGGGAGGAGGAGGCATTTCACGGAGAAGGAAACGCTCTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512895.5
CDS TCA 72 bp CAGCTCCTTTTTAAAATTCTCCTCTTGAGCCTTATGTaGGACCTCAGGGTCAACCAGAGGCTCGTCTACTCT +
Preference number: 6 (lower is better)
Translates to: QLLFKILLLSLM*DLRVNQRLVYS
Trigger: AGAGTAGACGAGCCTCTGGTTGACCCTGAGGTCTCACATAAGGCTCAAGAGGAGAATTTTAAAAAGGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
ENST00000510328.5
ENST00000511946.1
CDS CAA 72 bp TATGTGGCTTTTCTTCATAAAGCCATTGGCCTGCGTTaGACACAGACGTCTTCTTGGAAGGTCCCAGGTAGA +
Preference number: 6 (lower is better)
Translates to: YVAFLHKAIGLR*TQTSSWKVPGR
Trigger: TCTACCTGGGACCTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
ENST00000510328.5
ENST00000512895.5
ENST00000606246.1
CDS TCA 72 bp ACTGTGCTTGAAGTCTACCAAAGCCTCAGGCAACCTTaGCAAGTAGGAGTCATCCTTGACTTCTCTAACATT +
Preference number: 6 (lower is better)
Translates to: TVLEVYQSLRQP*QVGVILDFSNI
Trigger: AATGTTAGAGAAGTCAAGGATGACTCCTACTTGTCAAGGTTGCCTGAGGCTTTGGTAGACTTCAAGCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS GCA 72 bp TCATCAACAACCCAGATGTGGGTTCTATCAGGGTGCTaGAGTTTCTATCCTGTGTTTTTCACAGATCACCTT +
Preference number: 6 (lower is better)
Translates to: SSTTQMWVLSGC*SFYPVFFTDHL
Trigger: AAGGTGATCTGTGAAAAACACAGGATAGAAACTGCAGCACCCTGATAGAACCCACATCTGGGTTGTTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515589.1
CDS CCA 72 bp AATAATCACTCACCATTTCCCCATTTCCCTCGCTCCTaGCAACAACTAACCTACTTTTCTGTCTCCGTAGAT +
Preference number: 6 (lower is better)
Translates to: NNHSPFPHFPRS*QQLTYFSVSVD
Trigger: ATCTACGGAGACAGAAAAGTAGGTTAGTTGTTGCCAGGAGCGAGGGAAATGGGGAAATGGTGAGTGATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS CAA 72 bp CCTGATTTAGCTTCATCGTGTGGAGCGCATCATGGCTaGGTTTGGTCTCATAGTCAATGTCAAACTGTTTCA +
Preference number: 6 (lower is better)
Translates to: PDLASSCGAHHG*VWSHSQCQTVS
Trigger: TGAAACAGTTTGACATTGACTATGAGACCAAACCAAGCCATGATGCGCTCCACACGATGAAGCTAAATCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424749.7
ENST00000502320.2
ENST00000510197.5
CDS TCA 72 bp GGGTGGCAGATGCACTGTGATCATCTGAAGCTCAGATaGTCAAATCTCAGTATAAATACATACCTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: GWQMHCDHLKLR*SNLSINTYLFL
Trigger: CAGGAACAGGTATGTATTTATACTGAGATTTGATCATCTGAGCTTCAGATGATCACAGTGCATCTGCCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502320.2
ENST00000510328.5
CDS TCA 72 bp TCAGGATCAAGCACTTCCAGCACCTTTGATAAGAGCTaGGATTGGGTAGTGAAAAGAGGTTTATTTGGCTCA +
Preference number: 6 (lower is better)
Translates to: SGSSTSSTFDKS*DWVVKRGLFGS
Trigger: TGAGCCAAATAAACCTCTTTTCACTACCCAATCTCAGCTCTTATCAAAGGTGCTGGAAGTGCTTGATCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS GCA 72 bp TCCAAAAGTAGTAACCCACTTGCAGAAGTCACTAACTaGTTTGCATACATTTTCATGAAGACCAGGACGAGG +
Preference number: 6 (lower is better)
Translates to: SKSSNPLAEVTN*FAYIFMKTRTR
Trigger: CCTCGTCCTGGTCTTCATGAAAATGTATGCAAAGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510197.5
CDS CCA 72 bp TCTCTAACATTCTTAAAATCCAGCTCAGTTAAGGTCTaGCAGATTGTAACTGTCTCCTTCTCTGGACTGCTG +
Preference number: 6 (lower is better)
Translates to: SLTFLKSSSVKV*QIVTVSFSGLL
Trigger: CAGCAGTCCAGAGAAGGAGACAGTTACAATCTGCCAGACCTTAACTGAGCTGGATTTTAAGAATGTTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS TCA 72 bp ATGTGGCTTTTCTTCATAAAGCCATTGGCCTGCGTTTaGCACAGACGTCTTCTTGGAACTAAAGATAAGATC +
Preference number: 6 (lower is better)
Translates to: MWLFFIKPLACV*HRRLLGTKDKI
Trigger: GATCTTATCTTTAGTTCCAAGAAGACGTCTGTGTCAAACGCAGGCCAATGGCTTTATGAAGAAAAGCCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS GCA 72 bp TACAAAAGTAGTAACCCACTTGCAGAAGTCACTAACTaGTTTGCATACATTTTCATGAAGACCAGGACGAGG +
Preference number: 6 (lower is better)
Translates to: YKSSNPLAEVTN*FAYIFMKTRTR
Trigger: CCTCGTCCTGGTCTTCATGAAAATGTATGCAAAGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000606246.1
ENST00000606550.1
CDS TCA 72 bp TGTCTCCGTAGATTTGCCTGTTCTGGATATTTCATCTaGATGGAACCATGCAATATGCAGTCTTTTGTGTCT +
Preference number: 6 (lower is better)
Translates to: CLRRFACSGYFI*MEPCNMQSFVS
Trigger: AGACACAAAAGACTGCATATTGCATGGTTCCATTCAGATGAAATATCCAGAACAGGCAAATCTACGGAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS GCA 72 bp ATTAAAAGTAGTAACCCACTTGCAGAAGTCACTAACTaGTTTGCATACATTTTCATGAAGACCAGGACGAGG +
Preference number: 6 (lower is better)
Translates to: IKSSNPLAEVTN*FAYIFMKTRTR
Trigger: CCTCGTCCTGGTCTTCATGAAAATGTATGCAAAGCAGTTAGTGACTTCTGCAAGTGGGTTACTACTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510328.5
CDS CCA 72 bp GTTGCCACTTTTTGCCTGTTAAGGACAATGCTGCTATaGATATTCATGAACAAGCTTTTGTGTTCAATAGCC +
Preference number: 6 (lower is better)
Translates to: VATFCLLRTMLL*IFMNKLLCSIA
Trigger: GGCTATTGAACACAAAAGCTTGTTCATGAATATCCATAGCAGCATTGTCCTTAACAGGCAAAAAGTGGCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS CAA 72 bp TTTATCCATTCACAAACATATCCAGGTGATGGACTTTaGGGCTGTTGCCACTTTTTGCCTGTTAAGGACAAT +
Preference number: 6 (lower is better)
Translates to: FIHSQTYPGDGL*GCCHFLPVKDN
Trigger: ATTGTCCTTAACAGGCAAAAAGTGGCAACAGCCCAAAAGTCCATCACCTGGATATGTTTGTGAATGGATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS CAA 72 bp AGGACAATGCTGCTATGGATATTCATGAACAAGCTTTaGTGTTCAATAGCCTCTTGCTATTCCTCCAATAAA +
Preference number: 6 (lower is better)
Translates to: RTMLLWIFMNKL*CSIASCYSSNK
Trigger: TTTATTGGAGGAATAGCAAGAGGCTATTGAACACAAAAGCTTGTTCATGAATATCCATAGCAGCATTGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606550.1
CDS TCA 72 bp GTTTGGTCTCATAGTCAATGTCAAACTGTTTCAAGATaGACTCTTCATCGATGTCCGAAATTCCATTTTCAT +
Preference number: 6 (lower is better)
Translates to: VWSHSQCQTVSR*TLHRCPKFHFH
Trigger: ATGAAAATGGAATTTCGGACATCGATGAAGAGTTCATCTTGAAACAGTTTGACATTGACTATGAGACCAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424749.7
ENST00000502320.2