Pregenerated sensors for FAM3D (Homo sapiens)
Ensembl gene IDs: ENSG00000198643Ensembl transcript IDs: ENST00000358781.7, ENST00000482623.5, ENST00000483787.5, ENST00000489857.5, ENST00000498347.1
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTGGGCAGTTTGTCCTTCCTCAGGACCAGCCGTCAGCAGTCCCTaGCGAAAGCACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: VWAVCPSSGPAVSSP*RKHPILSTDSWFQK Trigger: CTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTGCTTTCGTCAGGGACTGCTGACGGCTGGTCCTGAGGAAGGACAAACTGCCCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| 3UTR-3UTR GCA 90 bp | GTTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGTGCTGTGGGAGGAGGCGCGACACAGCGTaGAAGGACCTGCAGCACCTT | + |
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Preference number: 2 (lower is better) Translates to: VPEGPSEAGLPGRMCCGRRRDTA*KDLQHL Trigger: AAGGTGCTGCAGGTCCTTGCACGCTGTGTCGCGCCT...CCTCCCACAGCACATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGTGCTGTGGGAGGGGCTTCTTCAGGCCCCTaGCTGAGGAAGAGCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: FQKDPLRLVFRVGCAVGGASSGP*LRKSHS Trigger: GCTGTGGCTCTTCCTCAGCCAGGGGCCTGAAGAAGC...CCCTCCCACAGCACATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGTCCCTGACGAAAGCACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGCCCCTGCCGGGCTCTaGCTCCTAAGTCAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QQSLTKAPHSLHRQLVPEAPAGL*LLSQAG Trigger: TCCTGCCTGACTTAGGAGTCAGAGCCCGGCAGGGGC...TTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTGCTTTCGTCAGGGACTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| 3UTR-3UTR GCA 90 bp | AAGCACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGGACCCTCTGAGGCTGCTCCTCCTCAGCCCCTaGCGGGCTCTGACTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: KHPILSTDSWFQKDPLRLLLLSP*RALTPK Trigger: CTTAGGAGTCAGAGCCCGGCAGGGGCTGAGGAGGAG...CAGCCTCAGAGGGTCCTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| 3UTR-3UTR GCA 90 bp | CACAGACAGCTGGTTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGCAGCGTGCAAGGACCTaGAGCACCTTCCACGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: HRQLVPEGPSEAGLPGRMQRART*STFHAA Trigger: TGCTGCGTGGAAGGTGCTGCAGGTCCTTGCACGCTG...CATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAACCAGCTGTCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| 3UTR-3UTR CCA 90 bp | CGGTCTTCAAAGCACATAGTAGGGCCCACGACGTTGGCGGCCCCACTGCAGATTCGCAAAGTAGTTGGCTaGGCAGGGCTTGATGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RSSKHIVGPTTLAAPLQIRKVVG*AGLDEA Trigger: GGCCTCATCAAGCCCTGCCCAGCCAACTACTTTGCG...AATCTGCAGTGGGGCCGCCAACGTCGTGGGCCCTACTATGTGCTTTGAAGACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| 3UTR GCA 72 bp | GAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGTaGTGTGGGAGGGTTCTGTTTCCGAGGAGGAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: EGPSEAGLPGRM*CGRVLFPRRRG Trigger: GCCTCTCCTCCTCGGAAACAGAACCCTCCCACAGCACATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | CCGAGGAGGAGAGGCGCGACACAGCGTGCAAGGACCTGCAGCACCTTCCACGCACCACCTCCCAGTTGCTaGAGGGGTAGTGGCCTCACA | + |
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Preference number: 4 (lower is better) Translates to: PRRRGATQRARTCSTFHAPPPSC*RGSGLT Trigger: TGTGAGGCCACTACCCCTCCAGCAACTGGGAGGTGG...TGCGTGGAAGGTGCTGCAGGTCCTTGCACGCTGTGTCGCGCCTCTCCTCCTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR GCA 90 bp | CACAGACAGCTGGTTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGCTTGGTGGGCGAGGCTaGCAGCCAGCGTGGCAGACG | + |
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Preference number: 4 (lower is better) Translates to: HRQLVPEGPSEAGLPGRMLGGRG*QPAWQT Trigger: CGTCTGCCACGCTGGCTGGCAGCCTCGCCCACCAAG...CATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAACCAGCTGTCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR GCA 90 bp | TTTCCGAGGAGGAGAGGCGCGACACAGCGTGCAAGGACCTGCAGCACCTTCCACCTCCTCCTCAGCCCCTaGCGGGCTCTGACTCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: FPRRRGATQRARTCSTFHLLLSP*RALTPK Trigger: CTTAGGAGTCAGAGCCCGGCAGGGGCTGAGGAGGAG...GTGGAAGGTGCTGCAGGTCCTTGCACGCTGTGTCGCGCCTCTCCTCCTCGGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR TCA 90 bp | CTGACTCCTAAGTCAGGCAGGAGCTTCTTCAGGCCCCTGGCTGAGGAAGAGCCAGCCCCTGCCGGGCTCTaGCTCCTAAGTCAGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LTPKSGRSFFRPLAEEEPAPAGL*LLSQAG Trigger: TCCTGCCTGACTTAGGAGTCAGAGCCCGGCAGGGGC...TGGCTCTTCCTCAGCCAGGGGCCTGAAGAAGCTCCTGCCTGACTTAGGAGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | GCACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGGACCCTCTGAGGCTGGTCCTGGATCTCCTTGGTaGGCGAGGCTGCCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: APHSLHRQLVPEGPSEAGPGSPW*ARLPAS Trigger: GCTGGCTGGCAGCCTCGCCCACCAAGGAGATCCAGG...ACCAGCCTCAGAGGGTCCTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | TTTCCGAGGAGGAGAGGCGCGACACAGCGTGCAAGGACCTGCAGCACCTTCCACGCTTCTTCAGGCCCCTaGCTGAGGAAGAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: FPRRRGATQRARTCSTFHASSGP*LRKSHS Trigger: GCTGTGGCTCTTCCTCAGCCAGGGGCCTGAAGAAGC...GTGGAAGGTGCTGCAGGTCCTTGCACGCTGTGTCGCGCCTCTCCTCCTCGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR TCA 90 bp | CGGTCTTCAAAGCACATAGTAGGGCCCACGACGTTGGCGGCCCCACTGCAGATTGCTCTTCCTCTGGGCTaGGTTGCCCTCCCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: RSSKHIVGPTTLAAPLQIALPLG*VALPAP Trigger: AGGTGCTGGGAGGGCAACTCAGCCCAGAGGAAGAGC...AATCTGCAGTGGGGCCGCCAACGTCGTGGGCCCTACTATGTGCTTTGAAGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR GCA 90 bp | TTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGTGCTGTGGGAGGGCAGCGTGCAAGGACCTaGAGCACCTTCCACGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FQKDPLRLVFRVGCAVGGQRART*STFHAA Trigger: TGCTGCGTGGAAGGTGCTGCAGGTCCTTGCACGCTG...CCCTCCCACAGCACATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | CTAAGTCAGGCAGGAGCTTCTTCAGGCCCCTGGCTGAGGAAGAGCCACAGCCACCCAGCACAGCTCCCGTaGTTCCATTCACCAGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LSQAGASSGPWLRKSHSHPAQLP*FHSPGR Trigger: TCGCCCTGGTGAATGGAACCACGGGAGCTGTGCTGG...GTGGCTGTGGCTCTTCCTCAGCCAGGGGCCTGAAGAAGCTCCTGCCTGACTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR GCA 90 bp | GCAGTCCCTGACGAAAGCACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGGGTCCCACCTCCCAGTTaGTGGAGGGGTAGTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AVPDESTPFSPQTAGSRRVPPPS*WRGSGL Trigger: GAGGCCACTACCCCTCCAGCAACTGGGAGGTGGGAC...CCTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTGCTTTCGTCAGGGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR GCA 90 bp | CTGACTCCTAAGTCAGGCAGGAGCTTCTTCAGGCCCCTGGCTGAGGAAGAGCCAAGGCGCGACACAGCGTaGAAGGACCTGCAGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: LTPKSGRSFFRPLAEEEPRRDTA*KDLQHL Trigger: AAGGTGCTGCAGGTCCTTGCACGCTGTGTCGCGCCT...TGGCTCTTCCTCAGCCAGGGGCCTGAAGAAGCTCCTGCCTGACTTAGGAGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | GTTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGTGCTGTGGGAGGGGCTGCCAGCCAGCGTaGCAGACGGATGGTTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: VPEGPSEAGLPGRMCCGRGCQPA*QTDGFH Trigger: ATGAAAACCATCCGTCTGCCACGCTGGCTGGCAGCC...CCTCCCACAGCACATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | CTAAGTCAGGCAGGAGCTTCTTCAGGCCCCTGGCTGAGGAAGAGCCACAGCCACCGCAAAGTAGTTGGCTaGGCAGGGCTTGATGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LSQAGASSGPWLRKSHSHRKVVG*AGLDEA Trigger: GGCCTCATCAAGCCCTGCCCAGCCAACTACTTTGCG...GTGGCTGTGGCTCTTCCTCAGCCAGGGGCCTGAAGAAGCTCCTGCCTGACTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR TCA 90 bp | AAGCACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGGACCCTCTGAGGCTGCTCATCCTGTCCAGGTaGAGGGTGGCTTGGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: KHPILSTDSWFQKDPLRLLILSR*RVAWGQ Trigger: CTGACCCCAAGCCACCCTTCACCTGGACAGGATGAG...CAGCCTCAGAGGGTCCTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR TCA 90 bp | CACAGACAGCTGGTTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGGAGGCGAAGCACACCTaGCACTCTCATCCTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HRQLVPEGPSEAGLPGRMEAKHT*HSHPVQ Trigger: CTGGACAGGATGAGAGTGTCAGGTGTGCTTCGCCTC...CATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAACCAGCTGTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR TCA 90 bp | ACCAGCCGTCAGCAGTCCCTGACGAAAGCACCCCATTCTCTCCACAGACAGCTGGGTCTTTGGCTCCTATaGAGACCCAGCTGTCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: TSRQQSLTKAPHSLHRQLGLWLL*RPSCPG Trigger: TCCGGGACAGCTGGGTCTTCATAGGAGCCAAAGACC...CAGCTGTCTGTGGAGAGAATGGGGTGCTTTCGTCAGGGACTGCTGACGGCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR GCA 90 bp | AGTCTGGGCAGTTTGTCCTTCCTCAGGACCAGCCGTCAGCAGTCCCTGACGAAAATGGCTTCGGGGGCATaGAGCCCTCCATCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SLGSLSFLRTSRQQSLTKMASGA*SPPSPA Trigger: TGCTGGAGATGGAGGGCTGCATGCCCCCGAAGCCAT...TTTCGTCAGGGACTGCTGACGGCTGGTCCTGAGGAAGGACAAACTGCCCAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | TCCCTGACGAAAGCACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGGACCCTGTCCAGGTGAAGGGTaGCTTGGGGTCAGCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLTKAPHSLHRQLVPEGPCPGEG*LGVSFH Trigger: GTGGAAGCTGACCCCAAGCCACCCTTCACCTGGACA...GGGTCCTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTGCTTTCGTCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | TTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGTGCTGTGGGAGGGGTTCATTTTGGTCCCTaGATCGTCGTAGGAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FQKDPLRLVFRVGCAVGGVHFGP*IVVGGH Trigger: GTGGCCTCCTACGACGATCCAGGGACCAAAATGAAC...CCCTCCCACAGCACATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | AGTCTGGGCAGTTTGTCCTTCCTCAGGACCAGCCGTCAGCAGTCCCTGACGAAAACAGCCACCCTAAAATaGCTTCGGGGGCATGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLGSLSFLRTSRQQSLTKTATLK*LRGHAA Trigger: GGCTGCATGCCCCCGAAGCCATTTTAGGGTGGCTGT...TTTCGTCAGGGACTGCTGACGGCTGGTCCTGAGGAAGGACAAACTGCCCAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | GTCTTCAAAGCACATAGTAGGGCCCACGACGTTGGCGGCCCCACTGCAGATTTTATGGAGGTTGGGGGCTaGGGGCTGACACTCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: VFKAHSRAHDVGGPTADFMEVGG*GLTLSS Trigger: GGATGAGAGTGTCAGCCCCCAGCCCCCAACCTCCAT...AAAATCTGCAGTGGGGCCGCCAACGTCGTGGGCCCTACTATGTGCTTTGAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR CCA 90 bp | GCGATGTTTAGGCCTCTGCCCACATTGTTTTTCACAGGACTCATGATCATGCGGGACCCTCCTGCAGGATaGAGGTTGGGGGCTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: AMFRPLPTLFFTGLMIMRDPPAG*RLGAGG Trigger: GCCCCCAGCCCCCAACCTCCATCCTGCAGGAGGGTC...CCGCATGATCATGAGTCCTGTGAAAAACAATGTGGGCAGAGGCCTAAACATCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR CCA 90 bp | GTCTTCAAAGCACATAGTAGGGCCCACGACGTTGGCGGCCCCACTGCAGATTTTCCTGGATCTCCTTGGTaGGCGAGGCTGCTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: VFKAHSRAHDVGGPTADFPGSPW*ARLLER Trigger: TCTCTCCAGCAGCCTCGCCCACCAAGGAGATCCAGG...AAAATCTGCAGTGGGGCCGCCAACGTCGTGGGCCCTACTATGTGCTTTGAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR GCA 90 bp | CACAGACAGCTGGTTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGCTTCCGGGTAGGATGTaGTGTGGGAGGGTTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: HRQLVPEGPSEAGLPGRMLPGRM*CGRVLF Trigger: AAACAGAACCCTCCCACAGCACATCCTACCCGGAAG...CATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAACCAGCTGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR GCA 90 bp | AGGGCCCACGACGTTGGCGGCCCCACTGCAGATTTTAAACGCAAAGTAGTTGGCCTTGGTGGGCGAGGCTaGTGGAGAGAAGACAGAATC | + |
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Preference number: 4 (lower is better) Translates to: RAHDVGGPTADFKRKVVGLGGRG*WREDRI Trigger: GATTCTGTCTTCTCTCCAGCAGCCTCGCCCACCAAG...GCCAACTACTTTGCGTTTAAAATCTGCAGTGGGGCCGCCAACGTCGTGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR CCA 90 bp | AGTCTGGGCAGTTTGTCCTTCCTCAGGACCAGCCGTCAGCAGTCCCTGACGAAAACTTCCCTGCTTCGATaGAGAAGGCGAGGTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLGSLSFLRTSRQQSLTKTSLLR*RRRGGP Trigger: TGGACCACCTCGCCTTCTCCATCGAAGCAGGGAAGT...TTTCGTCAGGGACTGCTGACGGCTGGTCCTGAGGAAGGACAAACTGCCCAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | GTTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGTGCTGTGGGAGGCATCTCCAGCAGCTCTaGCCATCCCTCGTATTTGTT | + |
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Preference number: 4 (lower is better) Translates to: VPEGPSEAGLPGRMCCGRHLQQL*PSLVFV Trigger: AACAAATACGAGGGATGGCCAGAGCTGCTGGAGATG...CCTCCCACAGCACATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | AGTCTGGGCAGTTTGTCCTTCCTCAGGACCAGCCGTCAGCAGTCCCTGACGAAACTCTCCACAGACAGCTaGTTCCAGAAGGACCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SLGSLSFLRTSRQQSLTKLSTDS*FQKDPL Trigger: CAGAGGGTCCTTCTGGAACCAGCTGTCTGTGGAGAG...TTTCGTCAGGGACTGCTGACGGCTGGTCCTGAGGAAGGACAAACTGCCCAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | TTTCCGAGGAGGAGAGGCGCGACACAGCGTGCAAGGACCTGCAGCACCTTCCACTTGTACTTTTTAACCTaGATCTCCTTGGTGGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: FPRRRGATQRARTCSTFHLYFLT*ISLVGE Trigger: CTCGCCCACCAAGGAGATCCAGGTTAAAAAGTACAA...GTGGAAGGTGCTGCAGGTCCTTGCACGCTGTGTCGCGCCTCTCCTCCTCGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | CATAGTAGGGCCCACGACGTTGGCGGCCCCACTGCAGATTTTAAACGCAAAGTACGCAAAGTAGTTGGCTaGGCAGGGCTTGATGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: HSRAHDVGGPTADFKRKVRKVVG*AGLDEA Trigger: GGCCTCATCAAGCCCTGCCCAGCCAACTACTTTGCG...TACTTTGCGTTTAAAATCTGCAGTGGGGCCGCCAACGTCGTGGGCCCTACTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR TCA 90 bp | CGGGCTCTGACTCCTAAGTCAGGCAGGAGCTTCTTCAGGCCCCTGGCTGAGGAAGGATGGTTTTCATGCTaGAGCTCATGTAGCTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: RALTPKSGRSFFRPLAEEGWFSC*SSCSFE Trigger: TTCGAAGCTACATGAGCTTCAGCATGAAAACCATCC...TTCCTCAGCCAGGGGCCTGAAGAAGCTCCTGCCTGACTTAGGAGTCAGAGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR GCA 90 bp | AGTCTGGGCAGTTTGTCCTTCCTCAGGACCAGCCGTCAGCAGTCCCTGACGAAAGAAGCCCAGTTGTTTTaGGTAGGAACTCCCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLGSLSFLRTSRQQSLTKEAQLF*VGTPQV Trigger: GACTTGGGGAGTTCCTACGCAAAACAACTGGGCTTC...TTTCGTCAGGGACTGCTGACGGCTGGTCCTGAGGAAGGACAAACTGCCCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CCA 90 bp | TTCAAAGCACATAGTAGGGCCCACGACGTTGGCGGCCCCACTGCAGATTTTAAATGTCCAGGTGAAGGGTaGCTTGGGGTCAGCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FKAHSRAHDVGGPTADFKCPGEG*LGVSFH Trigger: GTGGAAGCTGACCCCAAGCCACCCTTCACCTGGACA...TTTAAAATCTGCAGTGGGGCCGCCAACGTCGTGGGCCCTACTATGTGCTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR CCA 90 bp | GCGATGTTTAGGCCTCTGCCCACATTGTTTTTCACAGGACTCATGATCATGCGGCCAGCACAGCTCCCGTaGTTCCATTCACCAGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: AMFRPLPTLFFTGLMIMRPAQLP*FHSPGR Trigger: TCGCCCTGGTGAATGGAACCACGGGAGCTGTGCTGG...CCGCATGATCATGAGTCCTGTGAAAAACAATGTGGGCAGAGGCCTAAACATCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR TCA 90 bp | TTTAAACGCAAAGTAGTTGGCTGGGCAGGGCTTGATGAGGCCACACTTGTACTTCTCATCCTGTCCAGGTaGAGGGTGGCTTGGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: FKRKVVGWAGLDEATLVLLILSR*RVAWGQ Trigger: CTGACCCCAAGCCACCCTTCACCTGGACAGGATGAG...AAGTACAAGTGTGGCCTCATCAAGCCCTGCCCAGCCAACTACTTTGCGTTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR GCA 90 bp | CTGTTTCCGAGGAGGAGAGGCGCGACACAGCGTGCAAGGACCTGCAGCACCTTCCAGAGAAGAGTTTCCTaGTTTCATCGTTCATTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LFPRRRGATQRARTCSTFQRRVS*FHRSFW Trigger: CCAAAATGAACGATGAAAGCAGGAAACTCTTCTCTG...GAAGGTGCTGCAGGTCCTTGCACGCTGTGTCGCGCCTCTCCTCCTCGGAAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR GCA 90 bp | ATGTTTAGGCCTCTGCCCACATTGTTTTTCACAGGACTCATGATCATGCGGTCTCACTTCGGACCCTCCTaGAGGATGGAGGTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: MFRPLPTLFFTGLMIMRSHFGPS*RMEVGG Trigger: GCCCCCAACCTCCATCCTGCAGGAGGGTCCGAAGTG...AGACCGCATGATCATGAGTCCTGTGAAAAACAATGTGGGCAGAGGCCTAAACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR GCA 90 bp | GCCCACATTGTTTTTCACAGGACTCATGATCATGCGGTCTTCAAAGCACATAGTGAGGGCTCCCCAGCCTaGTCTTCCTCTGGGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: AHIVFHRTHDHAVFKAHSEGSPA*SSSGLS Trigger: ACTCAGCCCAGAGGAAGAGCAGGCTGGGGAGCCCTC...ACTATGTGCTTTGAAGACCGCATGATCATGAGTCCTGTGAAAAACAATGTGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR CCA 90 bp | AGTCTGGGCAGTTTGTCCTTCCTCAGGACCAGCCGTCAGCAGTCCCTGACGAAATTTCATCGTTCATTTTaGTCCCTGGATCGTCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGSLSFLRTSRQQSLTKFHRSF*SLDRRR Trigger: CCTACGACGATCCAGGGACCAAAATGAACGATGAAA...TTTCGTCAGGGACTGCTGACGGCTGGTCCTGAGGAAGGACAAACTGCCCAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS-3UTR GCA 90 bp | CACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGGACCCTCTGAGGCTGGTCAGGAATTTCACTAGGTaGATAACATCTCCAGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HPILSTDSWFQKDPLRLVRNFTR*ITSPEY Trigger: GTACTCTGGAGATGTTATGCACCTAGTGAAATTCCT...GACCAGCCTCAGAGGGTCCTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS-3UTR GCA 90 bp | AAATGCCTTCTGTCCCAGCACAGCTCCCGTGGTTCCATTCACCAGGGCGATGTTAGGAATTTCACTAGGTaGATAACATCTCCAGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KCLLSQHSSRGSIHQGDVRNFTR*ITSPEY Trigger: GTACTCTGGAGATGTTATGCACCTAGTGAAATTCCT...AACATCGCCCTGGTGAATGGAACCACGGGAGCTGTGCTGGGACAGAAGGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482623.5 |
||
| CDS-3UTR CCA 90 bp | AATTTCACTAGGTGCATAACATCTCCAGAGTACATGTCAAATGCCTTCTGTCCCGGTGGGCGAGGCTGCTaGAGAGAAGACAGAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFTRCITSPEYMSNAFCPGGRGC*REDRIW Trigger: CCAGATTCTGTCTTCTCTCCAGCAGCCTCGCCCACC...GGGACAGAAGGCATTTGACATGTACTCTGGAGATGTTATGCACCTAGTGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482623.5 |
||
| CDS-3UTR GCA 90 bp | GCCCACATTGTTTTTCACAGGACTCATGATCATGCGGTCTTCAAAGCACATAGTAGAGGGTTAGCCTCTTaGTGTCCTGTCCATGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHIVFHRTHDHAVFKAHSRGLAS*CPVHAE Trigger: CTCAGCATGGACAGGACAGCAAGAGGCTAACCCTCT...ACTATGTGCTTTGAAGACCGCATGATCATGAGTCCTGTGAAAAACAATGTGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482623.5 |
||
| CDS-3UTR CCA 90 bp | GCGATGTTTAGGCCTCTGCCCACATTGTTTTTCACAGGACTCATGATCATGCGGTTGTACTTTTTAACCTaGATCTCCTTGGTGGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AMFRPLPTLFFTGLMIMRLYFLT*ISLVGE Trigger: CTCGCCCACCAAGGAGATCCAGGTTAAAAAGTACAA...CCGCATGATCATGAGTCCTGTGAAAAACAATGTGGGCAGAGGCCTAAACATCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000482623.5 |
||
| CDS GCA 90 bp | CCTCCCAGCACCTGCAGAGCTACCTGGTGTCGTGAGTTTCTAGCCTaGTCACCCTGGCAGCCCGTGAGTGCTCTGGAGCTGGGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPSTCRATWCREFLA*SPWQPVSALELGPR Trigger: CCTGGGCCCCAGCTCCAGAGCACTCACGGGCTGCCAGGGTGAGCAGGCTAGAAACTCACGACACCAGGTAGCTCTGCAGGTGCTGGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483787.5 |
||
| CDS GCA 90 bp | TCCCACTTCCCTGCTTCGATGGAGAAGGCGAGGTGGTCCAGCAGGTaGCGTAGGTCCCTGACCCAGCTGACCACCACCCTGGGCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SHFPASMEKARWSSR*RRSLTQLTTTLGQL Trigger: AAGCTGGCCCAGGGTGGTGGTCAGCTGGGTCAGGGACCTACGGCACCTGCTGGACCACCTCGCCTTCTCCATCGAAGCAGGGAAGTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358781.7 ENST00000489857.5 |
||
| CDS-3UTR CAA 90 bp | CTGTTTCCGAGGAGGAGAGGCGCGACACAGCGTGCAAGGACCTGCAGCACCTTCGTAGGGCCCACGACGTaGGCGGCCCCACTGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LFPRRRGATQRARTCSTFVGPTT*AAPLQI Trigger: AATCTGCAGTGGGGCCGCCAACGTCGTGGGCCCTAC...GAAGGTGCTGCAGGTCCTTGCACGCTGTGTCGCGCCTCTCCTCCTCGGAAACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS TCA 90 bp | TGGATCTCCTTGGTGGGCGAGGCTGACACTCTCATCCTGTCCAGGTaGAGGGTGGCTTGGGGTCAGCTTCCACCCGAGGGCTCGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WISLVGEADTLILSR*RVAWGQLPPEGSRL Trigger: GAGCCTCGAGCCCTCGGGTGGAAGCTGACCCCAAGCCACCCTTCACCTGGACAGGATGAGAGTGTCAGCCTCGCCCACCAAGGAGATCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489857.5 |
||
| CDS TCA 90 bp | CTTCCACCTGGGCAGAGGGTTAGCCTCTTGCTGTCCTGTCCATGCTaGGCAGGAAATCTGGCTTCAGGGCAGTGGGGTGGAGAGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPPGQRVSLLLSCPC*AGNLASGQWGGEGQ Trigger: CTGCCCCTCTCCACCCCACTGCCCTGAAGCCAGATTTCCTGCTCAGCATGGACAGGACAGCAAGAGGCTAACCCTCTGCCCAGGTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000482623.5 ENST00000483787.5 |
||
| CDS-3UTR CAA 90 bp | CCGAGGAGGAGAGGCGCGACACAGCGTGCAAGGACCTGCAGCACCTTCCACGCATTACCCCTGAGGTCTTaGGCTCCTATGAAGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRRRGATQRARTCSTFHALPLRS*APMKTQ Trigger: CTGGGTCTTCATAGGAGCCAAAGACCTCAGGGGTAA...TGCGTGGAAGGTGCTGCAGGTCCTTGCACGCTGTGTCGCGCCTCTCCTCCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS-3UTR CAA 90 bp | AAGCACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGGACCCTCTGAGGCTGCAGGTGAAGGGTGGCTaGGGGTCAGCTTCCACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KHPILSTDSWFQKDPLRLQVKGG*GSASTR Trigger: TCGGGTGGAAGCTGACCCCAAGCCACCCTTCACCTG...CAGCCTCAGAGGGTCCTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CAA 90 bp | CAGCCGTCAGCAGTCCCTGACGAAAGCACCCCATTCTCTCCACAGACAGCTGGTTTAACCTGGATCTCCTaGGTGGGCGAGGCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QPSAVPDESTPFSPQTAGLTWIS*VGEAAS Trigger: GCTGGCAGCCTCGCCCACCAAGGAGATCCAGGTTAA...ACCAGCTGTCTGTGGAGAGAATGGGGTGCTTTCGTCAGGGACTGCTGACGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGTGCTGTGGGAGGTTGGCTGGGCAGGGCTaGATGAGGCCACACTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VPEGPSEAGLPGRMCCGRLAGQG*MRPHLY Trigger: GTACAAGTGTGGCCTCATCAAGCCCTGCCCAGCCAA...CCTCCCACAGCACATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGAAGGACCCTCTGAGGCTGGTCTTCCGGGTAGGATGTGCTGTGGGAGGGTCCCGGAAGCCCAGTaGTTTTGCGTAGGAACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VPEGPSEAGLPGRMCCGRVPEAQ*FCVGTP Trigger: GGGAGTTCCTACGCAAAACAACTGGGCTTCCGGGAC...CCTCCCACAGCACATCCTACCCGGAAGACCAGCCTCAGAGGGTCCTTCTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS-3UTR CAA 90 bp | CAGCCGTCAGCAGTCCCTGACGAAAGCACCCCATTCTCTCCACAGACAGCTGGTTCAAGTCTGGGCAGTTaGTCCTTCCTCAGGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QPSAVPDESTPFSPQTAGSSLGS*SFLRTS Trigger: GCTGGTCCTGAGGAAGGACAAACTGCCCAGACTTGA...ACCAGCTGTCTGTGGAGAGAATGGGGTGCTTTCGTCAGGGACTGCTGACGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS-3UTR CAA 90 bp | CACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGGACCCTCTGAGGCTGGTCGGAAGCCCAGTTGTTTaGCGTAGGAACTCCCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HPILSTDSWFQKDPLRLVGSPVV*RRNSPS Trigger: ACTTGGGGAGTTCCTACGCAAAACAACTGGGCTTCC...GACCAGCCTCAGAGGGTCCTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTCTGTCCCAGCACAGCTCCCGTGGTTCCATTCACCAGGGCGATGTTTATTAACCTGGATCTCCTaGGTGGGCGAGGCTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MPSVPAQLPWFHSPGRCLLTWIS*VGEAAG Trigger: TCCAGCAGCCTCGCCCACCAAGGAGATCCAGGTTAA...TAAACATCGCCCTGGTGAATGGAACCACGGGAGCTGTGCTGGGACAGAAGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482623.5 |
||
| CDS-3UTR CAA 90 bp | ACCAGCCGTCAGCAGTCCCTGACGAAAGCACCCCATTCTCTCCACAGACAGCTGAGGCCTCTGCCCACATaGTTTTTCACAGGACTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TSRQQSLTKAPHSLHRQLRPLPT*FFTGLM Trigger: CATGAGTCCTGTGAAAAACAATGTGGGCAGAGGCCT...CAGCTGTCTGTGGAGAGAATGGGGTGCTTTCGTCAGGGACTGCTGACGGCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS-3UTR CAA 90 bp | TCCCTGACGAAAGCACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGGACCCGGCCATCCCTCGTATTaGTTTGTGTCTGGGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLTKAPHSLHRQLVPEGPGHPSY*FVSGLF Trigger: GAACAGCCCAGACACAAACAAATACGAGGGATGGCC...GGGTCCTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTGCTTTCGTCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS GCA 90 bp | GCCACACTTGTACTTTTTAACCTGGATCTCCTTGGTGGGCGAGGCTaGCAGCCAGCGTGGCAGACGGATGGTTTTCATGCTGAAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ATLVLFNLDLLGGRG*QPAWQTDGFHAEAH Trigger: ATGAGCTTCAGCATGAAAACCATCCGTCTGCCACGCTGGCTGGCAGCCTCGCCCACCAAGGAGATCCAGGTTAAAAAGTACAAGTGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358781.7 ENST00000498347.1 |
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| CDS-3UTR CAA 90 bp | ATGTTTAGGCCTCTGCCCACATTGTTTTTCACAGGACTCATGATCATGCGGTCTGTAGGGCCCACGACGTaGGCGGCCCCACTGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: MFRPLPTLFFTGLMIMRSVGPTT*AAPLQI Trigger: AATCTGCAGTGGGGCCGCCAACGTCGTGGGCCCTAC...AGACCGCATGATCATGAGTCCTGTGAAAAACAATGTGGGCAGAGGCCTAAACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS CCA 90 bp | GTACTTTTTAACCTGGATCTCCTTGGTGGGCGAGGCCAGCCAGCGTaGCAGACGGATGGTTTTCATGCTGAAGCTCATGTAGCTTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VLFNLDLLGGRGQPA*QTDGFHAEAHVASN Trigger: ATTCGAAGCTACATGAGCTTCAGCATGAAAACCATCCGTCTGCCACGCTGGCTGGCCTCGCCCACCAAGGAGATCCAGGTTAAAAAGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483787.5 |
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| CDS-3UTR CAA 90 bp | GATCATGCGGTCTTCAAAGCACATAGTAGGGCCCACGACGTTGGCGGCCCCACTTTGATGAGGCCACACTaGTACTTTTTAACCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: DHAVFKAHSRAHDVGGPTLMRPH*YFLTWI Trigger: GATCCAGGTTAAAAAGTACAAGTGTGGCCTCATCAA...AGTGGGGCCGCCAACGTCGTGGGCCCTACTATGTGCTTTGAAGACCGCATGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR CAA 90 bp | CTGACTCCTAAGTCAGGCAGGAGCTTCTTCAGGCCCCTGGCTGAGGAAGAGCCAATCCCTCGTATTTGTTaGTGTCTGGGCTGTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LTPKSGRSFFRPLAEEEPIPRIC*CLGCSL Trigger: TAAAGAACAGCCCAGACACAAACAAATACGAGGGAT...TGGCTCTTCCTCAGCCAGGGGCCTGAAGAAGCTCCTGCCTGACTTAGGAGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CAA 90 bp | TCTGCCCACATTGTTTTTCACAGGACTCATGATCATGCGGTCTTCAAAGCACATCAGGTGAAGGGTGGCTaGGGGTCAGCTTCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAHIVFHRTHDHAVFKAHQVKGG*GSASTW Trigger: CCAGGTGGAAGCTGACCCCAAGCCACCCTTCACCTG...ATGTGCTTTGAAGACCGCATGATCATGAGTCCTGTGAAAAACAATGTGGGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS-3UTR CAA 90 bp | GCAGTCCCTGACGAAAGCACCCCATTCTCTCCACAGACAGCTGGTTCCAGAAGGTTGATGAGGCCACACTaGTACTTTTTAACCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: AVPDESTPFSPQTAGSRRLMRPH*YFLTWI Trigger: GATCCAGGTTAAAAAGTACAAGTGTGGCCTCATCAA...CCTTCTGGAACCAGCTGTCTGTGGAGAGAATGGGGTGCTTTCGTCAGGGACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358781.7 |
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| CDS-3UTR CAA 90 bp | TTCAAAGCACATAGTAGGGCCCACGACGTTGGCGGCCCCACTGCAGATTTTAAAAGGCCTCTGCCCACATaGTTTTTCACAGGACTCATG | + |
|
Preference number: 5 (lower is better) Translates to: FKAHSRAHDVGGPTADFKRPLPT*FFTGLM Trigger: CATGAGTCCTGTGAAAAACAATGTGGGCAGAGGCCT...TTTAAAATCTGCAGTGGGGCCGCCAACGTCGTGGGCCCTACTATGTGCTTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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| CDS GCA 72 bp | ACCCTGGGCCAGCTTCTGACAGTCCCACCTCCCAGTTaGTGGAGGGGTAGTGGCCTCACAGACGGCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TLGQLLTVPPPS*WRGSGLTDGPP Trigger: AGGAGGGCCGTCTGTGAGGCCACTACCCCTCCAGCAACTGGGAGGTGGGACTGTCAGAAGCTGGCCCAGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358781.7 ENST00000489857.5 |
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| CDS GCA 72 bp | CCTGCTTCGATGGAGAAGGCGAGGTGGTCCAGCAGGTaGCGTAGGTCCCTGACCCAGCTGACCACCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PASMEKARWSSR*RRSLTQLTTTL Trigger: CAGGGTGGTGGTCAGCTGGGTCAGGGACCTACGGCACCTGCTGGACCACCTCGCCTTCTCCATCGAAGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358781.7 ENST00000489857.5 |
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| CDS GCA 72 bp | CAGCTTCCACCCGAGGGCTCGAGGCTCCCACTTCCCTaGTTCGATGGAGAAGGCGAGGTGGTCCAGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLPPEGSRLPLP*FDGEGEVVQQV Trigger: CACCTGCTGGACCACCTCGCCTTCTCCATCGAAGCAGGGAAGTGGGAGCCTCGAGCCCTCGGGTGGAAGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358781.7 ENST00000489857.5 |
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| CDS CCA 72 bp | ACCCGAGGGCTCGAGGCTCCCACTTCCCTGCTTCGATaGAGAAGGCGAGGTGGTCCAGCAGGTGCCGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TRGLEAPTSLLR*RRRGGPAGAVG Trigger: ACCTACGGCACCTGCTGGACCACCTCGCCTTCTCCATCGAAGCAGGGAAGTGGGAGCCTCGAGCCCTCGGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358781.7 ENST00000489857.5 |
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| CDS CCA 72 bp | GCGAGGCTGACACTCTCATCCTGTCCAGGTGAAGGGTaGCTTGGGGTCAGCTTCCACCCGAGGGCTCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARLTLSSCPGEG*LGVSFHPRARG Trigger: GCCTCGAGCCCTCGGGTGGAAGCTGACCCCAAGCCACCCTTCACCTGGACAGGATGAGAGTGTCAGCCTCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489857.5 |
||
| CDS TCA 72 bp | TTGGTGGGCGAGGCTGACACTCTCATCCTGTCCAGGTaGAGGGTGGCTTGGGGTCAGCTTCCACCCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVGEADTLILSR*RVAWGQLPPEG Trigger: GCCCTCGGGTGGAAGCTGACCCCAAGCCACCCTTCACCTGGACAGGATGAGAGTGTCAGCCTCGCCCACCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489857.5 |
||
| CDS CCA 72 bp | CTGGGCCAGCTTCTGACAGTCCCACCTCCCAGTTGCTaGAGGGGTAGTGGCCTCACAGACGGCCCTCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: LGQLLTVPPPSC*RGSGLTDGPPL Trigger: TAGAGGAGGGCCGTCTGTGAGGCCACTACCCCTCCAGCAACTGGGAGGTGGGACTGTCAGAAGCTGGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358781.7 ENST00000489857.5 |
||
| CDS CCA 72 bp | GCACACCTGACACTCTCATCCTGTCCAGGTGAAGGGTaGCTTGGGGTCAGCTTCCACCCGAGGGCTCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AHLTLSSCPGEG*LGVSFHPRARG Trigger: GCCTCGAGCCCTCGGGTGGAAGCTGACCCCAAGCCACCCTTCACCTGGACAGGATGAGAGTGTCAGGTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS TCA 72 bp | AGGCGAAGCACACCTGACACTCTCATCCTGTCCAGGTaGAGGGTGGCTTGGGGTCAGCTTCCACCCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRSTPDTLILSR*RVAWGQLPPEG Trigger: GCCCTCGGGTGGAAGCTGACCCCAAGCCACCCTTCACCTGGACAGGATGAGAGTGTCAGGTGTGCTTCGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS TCA 72 bp | TTGCCCTCCCAGCACCTGCAGAGCTACCTGGTGTCGTaGGTTTCTAGCCTGCTCACCCTGGCAGCCCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPSQHLQSYLVS*VSSLLTLAARE Trigger: CTCACGGGCTGCCAGGGTGAGCAGGCTAGAAACTCACGACACCAGGTAGCTCTGCAGGTGCTGGGAGGGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483787.5 |
||
| CDS TCA 72 bp | AGGCGAAGCACACCTGACACTCTCATCCTGTCCAGGTaGAGGGTGGCTTGGGGTCAGCTTCCACCTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RRSTPDTLILSR*RVAWGQLPPGQ Trigger: CTGCCCAGGTGGAAGCTGACCCCAAGCCACCCTTCACCTGGACAGGATGAGAGTGTCAGGTGTGCTTCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000483787.5 ENST00000498347.1 |
||
| CDS CAA 72 bp | ATGAGGCCACACTTGTACTTTTTAACCTGGATCTCCTaGGTGGGCGAGGCTGCCAGCCAGCGTGGCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: MRPHLYFLTWIS*VGEAASQRGRR Trigger: CCGTCTGCCACGCTGGCTGGCAGCCTCGCCCACCAAGGAGATCCAGGTTAAAAAGTACAAGTGTGGCCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358781.7 ENST00000498347.1 |
||
| CDS CAA 72 bp | ATGAGGCCACACTTGTACTTTTTAACCTGGATCTCCTaGGTGGGCGAGGCCAGCCAGCGTGGCAGACGGATG | + |
|
Preference number: 6 (lower is better) Translates to: MRPHLYFLTWIS*VGEASQRGRRM Trigger: CATCCGTCTGCCACGCTGGCTGGCCTCGCCCACCAAGGAGATCCAGGTTAAAAAGTACAAGTGTGGCCTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483787.5 |
||
| CDS GCA 72 bp | GTACTTTTTAACCTGGATCTCCTTGGTGGGCGAGGCTaGCAGCCAGCGTGGCAGACGGATGGTTTTCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLFNLDLLGGRG*QPAWQTDGFHA Trigger: AGCATGAAAACCATCCGTCTGCCACGCTGGCTGGCAGCCTCGCCCACCAAGGAGATCCAGGTTAAAAAGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358781.7 ENST00000498347.1 |
||
| CDS CAA 72 bp | GGCTCCTATGAAGACCCAGCTGTCCCGGAAGCCCAGTaGTTTTGCGTAGGAACTCCCCAAGTCAGAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSYEDPAVPEAQ*FCVGTPQVREE Trigger: CTCTTCTCTGACTTGGGGAGTTCCTACGCAAAACAACTGGGCTTCCGGGACAGCTGGGTCTTCATAGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS TCA 72 bp | GTACTTTTTAACCTGGATCTCCTTGGTGGGCGAGGCTaGCACTCTCATCCTGTCCAGGTGAAGGGTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLFNLDLLGGRG*HSHPVQVKGGL Trigger: CAAGCCACCCTTCACCTGGACAGGATGAGAGTGTCAGCCTCGCCCACCAAGGAGATCCAGGTTAAAAAGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489857.5 |
||
| CDS CAA 72 bp | ATGAGGCCACACTTGTACTTTTTAACCTGGATCTCCTaGGTGGGCGAGGCTGACACTCTCATCCTGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MRPHLYFLTWIS*VGEADTLILSR Trigger: CCTGGACAGGATGAGAGTGTCAGCCTCGCCCACCAAGGAGATCCAGGTTAAAAAGTACAAGTGTGGCCTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489857.5 |
||
| CDS GCA 72 bp | TATGAAGACCCAGCTGTCCCGGAAGCCCAGTTGTTTTaGGTAGGAACTCCCCAAGTCAGAGAAGAGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: YEDPAVPEAQLF*VGTPQVREEFP Trigger: AGGAAACTCTTCTCTGACTTGGGGAGTTCCTACGCAAAACAACTGGGCTTCCGGGACAGCTGGGTCTTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS GCA 72 bp | TTGCGTAGGAACTCCCCAAGTCAGAGAAGAGTTTCCTaGTTTCATCGTTCATTTTGGTCCCTGGATCGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: LRRNSPSQRRVS*FHRSFWSLDRR Trigger: ACGACGATCCAGGGACCAAAATGAACGATGAAAGCAGGAAACTCTTCTCTGACTTGGGGAGTTCCTACGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358781.7 |
||
| CDS GCA 72 bp | GTACTTTTTAACCTGGATCTCCTTGGTGGGCGAGGCTaGTGGAGAGAAGACAGAATCTGGTTAGAGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: VLFNLDLLGGRG*WREDRIWLEEK Trigger: CTTTTCCTCTAACCAGATTCTGTCTTCTCTCCAGCAGCCTCGCCCACCAAGGAGATCCAGGTTAAAAAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482623.5 |
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