RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM3B (Homo sapiens)

Ensembl gene IDs: ENSG00000183844

Ensembl transcript IDs: ENST00000357985.7, ENST00000398646.3, ENST00000398647.7, ENST00000398652.7, ENST00000479810.6, ENST00000518236.1

Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TGGAATAAAGGTTTTCTCTCTGCAGGGCTGTCTGGACCACACAGGGGTCACACTTTGAGCGATTCCAGCTaGATTTGTTTATACAGAACA +
Preference number: 2 (lower is better)
Translates to: WNKGFLSAGLSGPHRGHTLSDSS*ICLYRT
Trigger: TGTTCTGTATAAACAAATGCAGCTGGAATCGCTCAA...AGTGTGACCCCTGTGTGGTCCAGACAGCCCTGCAGAGAGAAAACCTTTATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357985.7
3UTR-3UTR GCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCTTGAGCGATTCCAGCTaGATTTGTTTATACAGAACA +
Preference number: 2 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPLSDSS*ICLYRT
Trigger: TGTTCTGTATAAACAAATGCAGCTGGAATCGCTCAA...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
3UTR-3UTR GCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCATTGAGCGATTCCAGCTaGATTTGTTTATACAGAACA +
Preference number: 2 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPLSDSS*ICLYRT
Trigger: TGTTCTGTATAAACAAATGCAGCTGGAATCGCTCAA...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
3UTR TCA 72 bp TTCACAGGCCCACAGGAGGAGTTCAAGAGCTCAAGTTaGGTTGAACAAGGACATAACATAAGCCCCCTGAAC +
Preference number: 3 (lower is better)
Translates to: FTGPQEEFKSSS*VEQGHNISPLN
Trigger: GTTCAGGGGGCTTATGTTATGTCCTTGTTCAACTCAACTTGAGCTCTTGAACTCCTCCTGTGGGCCTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357985.7
3UTR-3UTR CAA 90 bp CCCCCTGAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGAAACTAAACCCTCTTTCCAGCTaGAATCACATCATTCCCTTT +
Preference number: 3 (lower is better)
Translates to: PPELLLILPAEGDDCRKLNPLSS*NHIIPF
Trigger: AAAGGGAATGATGTGATTCAAGCTGGAAAGAGGGTT...TAGTTTCCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTCAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357985.7
3UTR-3UTR CAA 90 bp GGCTGTCTGGACCACACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCAACTGCGTACCAAGATTaGATACAACTAGCAAATGTT +
Preference number: 3 (lower is better)
Translates to: GCLDHTGVTLRSDHNIAPTAYQD*IQLANV
Trigger: AACATTTGCTAGTTGTATCAAATCTTGGTACGCAGT...TGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGTGTGGTCCAGACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
3UTR-3UTR CAA 90 bp CACACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTCGATTCCAGCTGCATTaGTTTATACAGAACACATTT +
Preference number: 3 (lower is better)
Translates to: HTGVTLRSDHNIAPPGQARFQLH*FIQNTF
Trigger: AAATGTGTTCTGTATAAACAAATGCAGCTGGAATCG...AGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
3UTR-3UTR CAA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCAAGAAAAATAAGATTCTaGAGCGATTCCAGCTGCATT +
Preference number: 3 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPRKIRF*SDSSCI
Trigger: AATGCAGCTGGAATCGCTCAAGAATCTTATTTTTCT...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GGCTGTCTGGACCACACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCAGGCGCATCTTCCAGGTaGCGCTCCCCTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GCLDHTGVTLRSDHNIAPGASSR*RSPPGP
Trigger: AGGGCCAGGAGGGGAGCGGCACCTGGAAGATGCGCC...TGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGTGTGGTCCAGACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp CCCCCTGAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGAAACTACAGGCCTCTCCCCGATaGTGCGGATGCTATAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPELLLILPAEGDDCRKLQASPR*CGCYRQ
Trigger: CTGCCTATAGCATCCGCAGCATCGGGGAGAGGCCTG...TAGTTTCCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR TCA 90 bp GATCATAACATAGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCCCACGAACACCACCTTaGGCAGGCCACCAGCCAATG +
Preference number: 4 (lower is better)
Translates to: DHNIAPPGQAVSPNPLSSPRTPP*AGHQPM
Trigger: CATTGGCTGGTGGCCTGCTCAAGGTGGTGTTCGTGG...GCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCTATGTTATGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGGCGCATCTTCCAGGTaGCGCTCCCCTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAGASSR*RSPPGP
Trigger: AGGGCCAGGAGGGGAGCGGCACCTGGAAGATGCGCC...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTGGCGCATCTTCCAGGTaGCGCTCCCCTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSGASSR*RSPPGP
Trigger: AGGGCCAGGAGGGGAGCGGCACCTGGAAGATGCGCC...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp TGGAATAAAGGTTTTCTCTCTGCAGGGCTGTCTGGACCACACAGGGGTCACACTGGACAGGGGTGCATCTaGAATGAGCTCTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: WNKGFLSAGLSGPHRGHTGQGCI*NELCEQ
Trigger: CTGCTCGCAGAGCTCATTCCAGATGCACCCCTGTCC...AGTGTGACCCCTGTGTGGTCCAGACAGCCCTGCAGAGAGAAAACCTTTATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp AGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCTTGAATCACATCCCCGATGCTGCGGATaGTATAGGCAGCACTGGACA +
Preference number: 4 (lower is better)
Translates to: SSTWTSCFSQPSFQLESHPRCCG*YRQHWT
Trigger: TGTCCAGTGCTGCCTATAGCATCCGCAGCATCGGGG...ATGTGATTCAAGCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp GGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTGTTTCTGCCTCTCCCCGATGCTaGGGATGCTATAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GVTLRSDHNIAPPGQAVSASPRC*GCYRQH
Trigger: GTGCTGCCTATAGCATCCGCAGCATCGGGGAGAGGC...AGAAACAGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR TCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTTGGGGACTGGAGCTTTaGGGACAGGCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSWGLEL*GQASPR
Trigger: TCGGGGAGAGGCCTGTCCTCAAAGCTCCAGTCCCCA...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR TCA 90 bp CACACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTCCCAGCAGAAGGAGATaGCTGTCGGAAACTAGGAGG +
Preference number: 4 (lower is better)
Translates to: HTGVTLRSDHNIAPPGQAPSRRR*LSETRR
Trigger: CCTCCTAGTTTCCGACAGTCATCTCCTTCTGCTGGG...AGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR TCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTACCAAGCAGCTGCTGTaGACGACTTGGTGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSTKQLL*TTWWRP
Trigger: GGGCCGCCACCAAGTCGTTCACAGCAGCTGCTTGGT...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398646.3
CDS-3UTR CCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCACAGGCCACCAGCCAATaGGCGCATCTTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAQATSQ*AHLPGA
Trigger: GGCACCTGGAAGATGCGCCCATTGGCTGGTGGCCTG...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR TCA 90 bp CCCCCTGAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGAAACTACGTCATAGGTCACCATaGAGAGCAGGGATTTTGGAG +
Preference number: 4 (lower is better)
Translates to: PPELLLILPAEGDDCRKLRHRSP*RAGILE
Trigger: CTCCAAAATCCCTGCTCTTCATGGTGACCTATGACG...TAGTTTCCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR TCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTCCACGAACACCACCTTaGGCAGGCCAGGGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSPRTPP*AGQGKL
Trigger: CAACTTGCCCTGGCCTGCTCAAGGTGGTGTTCGTGG...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398652.7
CDS-3UTR GCA 90 bp ACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTGTTAGCACTGGACAGGGGTaGATCTGGAATGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TGVTLRSDHNIAPPGQAVSTGQG*IWNELC
Trigger: GCAGAGCTCATTCCAGATGCACCCCTGTCCAGTGCT...AACAGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGCCTCTCCCCGATGCTaGGGATGCTATAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAASPRC*GCYRQH
Trigger: GTGCTGCCTATAGCATCCGCAGCATCGGGGAGAGGC...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCACAGGCCTCTCCCCGATaGTGCGGATGCTATAGGCAG +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAQASPR*CGCYRQ
Trigger: CTGCCTATAGCATCCGCAGCATCGGGGAGAGGCCTG...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR CCA 90 bp AATGGAATAAAGGTTTTCTCTCTGCAGGGCTGTCTGGACCACACAGGGGTCACATGCTATAGGCAGCACTaGACAGGGGTGCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: NGIKVFSLQGCLDHTGVTCYRQH*TGVHLE
Trigger: TTCCAGATGCACCCCTGTCCAGTGCTGCCTATAGCA...TGTGACCCCTGTGTGGTCCAGACAGCCCTGCAGAGAGAAAACCTTTATTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATGGAGCACCAGCCAATaGGCGCATCTTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAWSTSQ*AHLPGA
Trigger: GGCACCTGGAAGATGCGCCCATTGGCTGGTGCTCCA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398647.7
CDS-3UTR TCA 90 bp CATAAGCCCCCTGAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGGAGTTGTGGAATGAATaGATACATTCACAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: HKPPELLLILPAEGDDCRELWNE*IHSQAH
Trigger: GTGGGCCTGTGAATGTATTCATTCATTCCACAACTC...CCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTCAGGGGGCTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTCCCCGATGCTGCGGATaGTATAGGCAGCACTGGACA +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSPRCCG*YRQHWT
Trigger: TGTCCAGTGCTGCCTATAGCATCCGCAGCATCGGGG...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR CCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTGGACAGGGGTGCATCTaGAATGAGCTCTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSGQGCI*NELCEQ
Trigger: CTGCTCGCAGAGCTCATTCCAGATGCACCCCTGTCC...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR CCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGGACAGGGGTGCATCTaGAATGAGCTCTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAGQGCI*NELCEQ
Trigger: CTGCTCGCAGAGCTCATTCCAGATGCACCCCTGTCC...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR CCA 90 bp ACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTGTTTTGCCTTTTGGGGACTaGAGCTTTGAGGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: TGVTLRSDHNIAPPGQAVLPFGD*SFEDRP
Trigger: AGGCCTGTCCTCAAAGCTCCAGTCCCCAAAAGGCAA...AACAGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CCA 90 bp AGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCTTGAATCACATGGGCAGGGAGTCCAGTaGTCACATTTTTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SSTWTSCFSQPSFQLESHGQGVQ*SHFCLL
Trigger: CAAAAGGCAAAAATGTGACCACTGGACTCCCTGCCC...ATGTGATTCAAGCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTGGCATAGGTGTCAGATaGGCAGGGAGTCCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSGIGVR*AGSPVV
Trigger: GACCACTGGACTCCCTGCCCATCTGACACCTATGCC...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp TGGAATAAAGGTTTTCTCTCTGCAGGGCTGTCTGGACCACACAGGGGTCACACTCCTCAAAGCAGATTTTaGCGTACTTGCTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WNKGFLSAGLSGPHRGHTPQSRF*RTCFCH
Trigger: GTGGCAGAAGCAAGTACGCCAAAATCTGCTTTGAGG...AGTGTGACCCCTGTGTGGTCCAGACAGCCCTGCAGAGAGAAAACCTTTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CCA 90 bp CATAAGCCCCCTGAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGGTCAGCTTCGTTCTTTaGGTATGCAGCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: HKPPELLLILPAEGDDCRVSFVL*VCSLLS
Trigger: AGATAGAAGGCTGCATACCCAAAGAACGAAGCTGAC...CCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTCAGGGGGCTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR TCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTTTCTGCCACCTCCGCTaGGTAACCTGTAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSFCHLR*VTCRHR
Trigger: CCTATGCCTACAGGTTACTCAGCGGAGGTGGCAGAA...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR TCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATTCTGCCACCTCCGCTaGGTAACCTGTAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAFCHLR*VTCRHR
Trigger: CCTATGCCTACAGGTTACTCAGCGGAGGTGGCAGAA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp ACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTGTTATCTGGAATGAGCTCTaGGAGCAGGTACCCCGAATA +
Preference number: 4 (lower is better)
Translates to: TGVTLRSDHNIAPPGQAVIWNEL*EQVPRI
Trigger: TATTCGGGGTACCTGCTCGCAGAGCTCATTCCAGAT...AACAGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAAGCACTGGACAGGGGTaGATCTGGAATGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPASTGQG*IWNELC
Trigger: GCAGAGCTCATTCCAGATGCACCCCTGTCCAGTGCT...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR GCA 90 bp GGCTGTCTGGACCACACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCACGTTATTCAGTCTTGTaGTTCCGTCGTCATAGGTCA +
Preference number: 4 (lower is better)
Translates to: GCLDHTGVTLRSDHNIAPRYSVL*FRRHRS
Trigger: TGACCTATGACGACGGAAGCACAAGACTGAATAACG...TGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGTGTGGTCCAGACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp CCCCCTGAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGAAACTATTCTATCTGGATCTCTaGAGGCCAGCCAGAATATCT +
Preference number: 4 (lower is better)
Translates to: PPELLLILPAEGDDCRKLFYLDL*RPARIS
Trigger: AGATATTCTGGCTGGCCTGCAGAGATCCAGATAGAA...TAGTTTCCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTCAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp CATAAGCCCCCTGAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGTTCGTTCTTTGGGTATaGAGCCTTCTATCTGGATCT +
Preference number: 4 (lower is better)
Translates to: HKPPELLLILPAEGDDCRFVLWV*SLLSGS
Trigger: AGATCCAGATAGAAGGCTGCATACCCAAAGAACGAA...CCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTCAGGGGGCTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCACTTGGTGGCGGCCCTaGCCCTTGGCCCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSTWWRP*PLALPI
Trigger: GATGGGGAGGGCCAAGGGCCAGGGCCGCCACCAAGT...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398646.3
CDS-3UTR GCA 90 bp GGCTGTCTGGACCACACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCAGAGTTCCAAGCCTTTTaGTGCAATAAATACCCAGCT +
Preference number: 4 (lower is better)
Translates to: GCLDHTGVTLRSDHNIAPEFQAF*CNKYPA
Trigger: AGCTGGGTATTTATTGCAGCAAAAGGCTTGGAACTC...TGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGTGTGGTCCAGACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp AGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCTTGAATCACATATTTACTCAGGACCCTaGAGTGTCAGCTTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: SSTWTSCFSQPSFQLESHIYSGP*SVSFVL
Trigger: AAGAACGAAGCTGACACTGCAGGGTCCTGAGTAAAT...ATGTGATTCAAGCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR TCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCTGGGGACTGGAGCTTTaGGGACAGGCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSWGLEL*GQASPR
Trigger: TCGGGGAGAGGCCTGTCCTCAAAGCTCCAGTCCCCA...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR TCA 90 bp GGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTGTTTCTCCCAGAGTTGTGGAATaGATGAATACATTCACAGGC +
Preference number: 4 (lower is better)
Translates to: GVTLRSDHNIAPPGQAVSPRVVE*MNTFTG
Trigger: GCCTGTGAATGTATTCATTCATTCCACAACTCTGGG...AGAAACAGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR TCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCCCACGAACACCACCTTaGGCAGGCCTGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPPRTPP*AGLQRG
Trigger: TCCTCTCTGCAGGCCTGCTCAAGGTGGTGTTCGTGG...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398646.3
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAATCTGGAATGAGCTCTaGGAGCAGGTACCCCGAATA +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAIWNEL*EQVPRI
Trigger: TATTCGGGGTACCTGCTCGCAGAGCTCATTCCAGAT...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR GCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCAGCCTCTCCCCGATGCTaGGGATGCTATAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPASPRC*GCYRQH
Trigger: GTGCTGCCTATAGCATCCGCAGCATCGGGGAGAGGC...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR CCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTGGGCAGGGAGTCCAGTaGTCACATTTTTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSGQGVQ*SHFCLL
Trigger: CAAAAGGCAAAAATGTGACCACTGGACTCCCTGCCC...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp TGGAATAAAGGTTTTCTCTCTGCAGGGCTGTCTGGACCACACAGGGGTCACACTCAATGTTTATTCCTCTaGCAACATTTCCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: WNKGFLSAGLSGPHRGHTQCLFL*QHFPAV
Trigger: AACAGCTGGGAAATGTTGCCAGAGGAATAAACATTG...AGTGTGACCCCTGTGTGGTCCAGACAGCCCTGCAGAGAGAAAACCTTTATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CCA 90 bp GATCATAACATAGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCGAAGAGCAGGGATTTTaGAGCAGCACTCTGAATAAA +
Preference number: 4 (lower is better)
Translates to: DHNIAPPGQAVSPNPLSSEEQGF*SSTLNK
Trigger: TTTATTCAGAGTGCTGCTCCAAAATCCCTGCTCTTC...GCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCTATGTTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CCA 90 bp CCCCCTGAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGAAACTATTCCAAGTGCTTCTATaGCATTCTTGGCATCGTTAT +
Preference number: 4 (lower is better)
Translates to: PPELLLILPAEGDDCRKLFQVLL*HSWHRY
Trigger: ATAACGATGCCAAGAATGCCATAGAAGCACTTGGAA...TAGTTTCCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTCAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCACACATTTTTGCCTTTTaGGGACTGGAGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAHIFAF*GLEHQP
Trigger: TGGCTGGTGCTCCAGTCCCCAAAAGGCAAAAATGTG...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398647.7
CDS-3UTR TCA 90 bp ACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTGTTTTTGGAGCAGCACTCTaGATAAACTTTGTCATCGGT +
Preference number: 4 (lower is better)
Translates to: TGVTLRSDHNIAPPGQAVFGAAL*INFVIG
Trigger: ACCGATGACAAAGTTTATTCAGAGTGCTGCTCCAAA...AACAGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR TCA 90 bp AGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCTTGAATCACATTTCAAGAGCTCAAGTTaGGTTGAACAAGGACATAAC +
Preference number: 4 (lower is better)
Translates to: SSTWTSCFSQPSFQLESHFKSSS*VEQGHN
Trigger: GTTATGTCCTTGTTCAACTCAACTTGAGCTCTTGAA...ATGTGATTCAAGCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCCCCCGATGCTGCGGATaGTATAGGCAGCACTGGACA +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPPRCCG*YRQHWT
Trigger: TGTCCAGTGCTGCCTATAGCATCCGCAGCATCGGGG...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR GCA 90 bp GATCATAACATAGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCTTCCAAGCCTTTTGCTaGAATAAATACCCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: DHNIAPPGQAVSPNPLSSFQAFC*NKYPAR
Trigger: TCTAGCTGGGTATTTATTGCAGCAAAAGGCTTGGAA...GCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCTATGTTATGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCAGGCATAGGTGTCAGATaGGCAGGGAGTCCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPGIGVR*AGSPVV
Trigger: GACCACTGGACTCCCTGCCCATCTGACACCTATGCC...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCACGTTATTCAGTCTTGTaGTTCCGTCGTCATAGGTCA +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPARYSVL*FRRHRS
Trigger: TGACCTATGACGACGGAAGCACAAGACTGAATAACG...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTCGTTATTCAGTCTTGTaGTTCCGTCGTCATAGGTCA +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSRYSVL*FRRHRS
Trigger: TGACCTATGACGACGGAAGCACAAGACTGAATAACG...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTGTTTCTTTCTTTACTTCCAAGTaGTTCTATGGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GVTLRSDHNIAPPGQAVSFFTSK*FYGILG
Trigger: GCCAAGAATGCCATAGAAGCACTTGGAAGTAAAGAA...AGAAACAGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATTCTATCTGGATCTCTaGAGGCCAGCCAGAATATCT +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAFYLDL*RPARIS
Trigger: AGATATTCTGGCTGGCCTGCAGAGATCCAGATAGAA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp AGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCTTGAATCACATTTGAGCGATTCCAGCTaGATTTGTTTATACAGAACA +
Preference number: 4 (lower is better)
Translates to: SSTWTSCFSQPSFQLESHLSDSS*ICLYRT
Trigger: TGTTCTGTATAAACAAATGCAGCTGGAATCGCTCAA...ATGTGATTCAAGCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCAAGGACACCAAGCAGCTaGTGTGAACGACTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPRTPSS*CERLGG
Trigger: GCCACCAAGTCGTTCACAGCAGCTGCTTGGTGTCCT...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398646.3
CDS-3UTR CCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCGGCATAGGTGTCAGATaGGCAGGGAGTCCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSGIGVR*AGSPVV
Trigger: GACCACTGGACTCCCTGCCCATCTGACACCTATGCC...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTGTCAGCTTCGTTCTTTaGGTATGCAGCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSVSFVL*VCSLLS
Trigger: AGATAGAAGGCTGCATACCCAAAGAACGAAGCTGAC...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTCAGCTTCGTTCTTTaGGTATGCAGCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAVSFVL*VCSLLS
Trigger: AGATAGAAGGCTGCATACCCAAAGAACGAAGCTGAC...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR TCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATTTGGAGCAGCACTCTaGATAAACTTTGTCATCGGT +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAFGAAL*INFVIG
Trigger: ACCGATGACAAAGTTTATTCAGAGTGCTGCTCCAAA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR TCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTACCCTCTTTCCAGCTTaGATCACATCATTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSTLFPA*ITSFPL
Trigger: TAAAGGGAATGATGTGATTCAAGCTGGAAAGAGGGT...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGAGTTCCAAGCCTTTTaGTGCAATAAATACCCAGCT +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAEFQAF*CNKYPA
Trigger: AGCTGGGTATTTATTGCAGCAAAAGGCTTGGAACTC...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTGAGTTCCAAGCCTTTTaGTGCAATAAATACCCAGCT +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSEFQAF*CNKYPA
Trigger: AGCTGGGTATTTATTGCAGCAAAAGGCTTGGAACTC...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATTCGTTCTTTGGGTATaGAGCCTTCTATCTGGATCT +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAFVLWV*SLLSGS
Trigger: AGATCCAGATAGAAGGCTGCATACCCAAAGAACGAA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCTTGCCTTTTGGGGACTaGAGCTTTGAGGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPLPFGD*SFEDRP
Trigger: AGGCCTGTCCTCAAAGCTCCAGTCCCCAAAAGGCAA...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR CCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTGAAGAGCAGGGATTTTaGAGCAGCACTCTGAATAAA +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSEEQGF*SSTLNK
Trigger: TTTATTCAGAGTGCTGCTCCAAAATCCCTGCTCTTC...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGAAGAGCAGGGATTTTaGAGCAGCACTCTGAATAAA +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAEEQGF*SSTLNK
Trigger: TTTATTCAGAGTGCTGCTCCAAAATCCCTGCTCTTC...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR TCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCACGTCATAGGTCACCATaGAGAGCAGGGATTTTGGAG +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPRHRSP*RAGILE
Trigger: CTCCAAAATCCCTGCTCTTCATGGTGACCTATGACG...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR TCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCCGTCATAGGTCACCATaGAGAGCAGGGATTTTGGAG +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPRHRSP*RAGILE
Trigger: CTCCAAAATCCCTGCTCTTCATGGTGACCTATGACG...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAATCAAAACATCGTGTTaGTGTCACATTCCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAIKTSC*CHIPSY
Trigger: GTAACTGGGAATGTGACAGCAACACGATGTTTTGAT...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATTCTTTACTTCCAAGTaGTTCTATGGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAFFTSK*FYGILG
Trigger: GCCAAGAATGCCATAGAAGCACTTGGAAGTAAAGAA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATTCCAAGCCTTTTGCTaGAATAAATACCCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAFQAFC*NKYPAR
Trigger: TCTAGCTGGGTATTTATTGCAGCAAAAGGCTTGGAA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTTTCCAAGCCTTTTGCTaGAATAAATACCCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSFQAFC*NKYPAR
Trigger: TCTAGCTGGGTATTTATTGCAGCAAAAGGCTTGGAA...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTCTTCTATGGCATTCTTaGCATCGTTATTCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSLLWHS*HRYSVL
Trigger: CAAGACTGAATAACGATGCCAAGAATGCCATAGAAG...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTTTCCAAGTGCTTCTATaGCATTCTTGGCATCGTTAT +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSFQVLL*HSWHRY
Trigger: ATAACGATGCCAAGAATGCCATAGAAGCACTTGGAA...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATTCCAAGTGCTTCTATaGCATTCTTGGCATCGTTAT +
Preference number: 4 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAFQVLL*HSWHRY
Trigger: ATAACGATGCCAAGAATGCCATAGAAGCACTTGGAA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR TCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTTCCCAGTTACATAGTTaGCAATGGCAATGTTTATTC +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSSQLHS*QWQCLF
Trigger: GAATAAACATTGCCATTGTCAACTATGTAACTGGGA...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTTTGAGCGATTCCAGCTaGATTTGTTTATACAGAACA +
Preference number: 4 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSLSDSS*ICLYRT
Trigger: TGTTCTGTATAAACAAATGCAGCTGGAATCGCTCAA...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCGGGCAGGGAGTCCAGTaGTCACATTTTTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSGQGVQ*SHFCLL
Trigger: CAAAAGGCAAAAATGTGACCACTGGACTCCCTGCCC...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCCCTCAAAGCAGATTTTaGCGTACTTGCTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPPQSRF*RTCFCH
Trigger: GTGGCAGAAGCAAGTACGCCAAAATCTGCTTTGAGG...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCACCTCAAAGCAGATTTTaGCGTACTTGCTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPPQSRF*RTCFCH
Trigger: GTGGCAGAAGCAAGTACGCCAAAATCTGCTTTGAGG...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCATTTACTCAGGACCCTaGAGTGTCAGCTTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPIYSGP*SVSFVL
Trigger: AAGAACGAAGCTGACACTGCAGGGTCCTGAGTAAAT...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCGTCAGCTTCGTTCTTTaGGTATGCAGCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPVSFVL*VCSLLS
Trigger: AGATAGAAGGCTGCATACCCAAAGAACGAAGCTGAC...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR TCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCATTTGGAGCAGCACTCTaGATAAACTTTGTCATCGGT +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPFGAAL*INFVIG
Trigger: ACCGATGACAAAGTTTATTCAGAGTGCTGCTCCAAA...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR TCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCTTTGGAGCAGCACTCTaGATAAACTTTGTCATCGGT +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPFGAAL*INFVIG
Trigger: ACCGATGACAAAGTTTATTCAGAGTGCTGCTCCAAA...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCGAGTTCCAAGCCTTTTaGTGCAATAAATACCCAGCT +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPEFQAF*CNKYPA
Trigger: AGCTGGGTATTTATTGCAGCAAAAGGCTTGGAACTC...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCATTCGTTCTTTGGGTATaGAGCCTTCTATCTGGATCT +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPFVLWV*SLLSGS
Trigger: AGATCCAGATAGAAGGCTGCATACCCAAAGAACGAA...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCATTTACTCAGGACCCTaGAGTGTCAGCTTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSIYSGP*SVSFVL
Trigger: AAGAACGAAGCTGACACTGCAGGGTCCTGAGTAAAT...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCAGAAGAGCAGGGATTTTaGAGCAGCACTCTGAATAAA +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPEEQGF*SSTLNK
Trigger: TTTATTCAGAGTGCTGCTCCAAAATCCCTGCTCTTC...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR TCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCACCAACAAACGTCCTTaGACGTTTATGTCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSTNKRP*TFMSKQ
Trigger: CTGCTTTGACATAAACGTTCAAGGACGTTTGTTGGT...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398652.7
CDS-3UTR GCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCAATCAAAACATCGTGTTaGTGTCACATTCCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPIKTSC*CHIPSY
Trigger: GTAACTGGGAATGTGACAGCAACACGATGTTTTGAT...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCATTCTTTACTTCCAAGTaGTTCTATGGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPFFTSK*FYGILG
Trigger: GCCAAGAATGCCATAGAAGCACTTGGAAGTAAAGAA...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCCAATGTTTATTCCTCTaGCAACATTTCCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPQCLFL*QHFPAV
Trigger: AACAGCTGGGAAATGTTGCCAGAGGAATAAACATTG...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCCTTCTATGGCATTCTTaGCATCGTTATTCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPLLWHS*HRYSVL
Trigger: CAAGACTGAATAACGATGCCAAGAATGCCATAGAAG...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCATTCCAAGTGCTTCTATaGCATTCTTGGCATCGTTAT +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPFQVLL*HSWHRY
Trigger: ATAACGATGCCAAGAATGCCATAGAAGCACTTGGAA...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR TCA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCATCCCAGTTACATAGTTaGCAATGGCAATGTTTATTC +
Preference number: 4 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPSQLHS*QWQCLF
Trigger: GAATAAACATTGCCATTGTCAACTATGTAACTGGGA...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCATCAAAACATCGTGTTaGTGTCACATTCCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSIKTSC*CHIPSY
Trigger: GTAACTGGGAATGTGACAGCAACACGATGTTTTGAT...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCTTCTTTACTTCCAAGTaGTTCTATGGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSFFTSK*FYGILG
Trigger: GCCAAGAATGCCATAGAAGCACTTGGAAGTAAAGAA...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCCAATGTTTATTCCTCTaGCAACATTTCCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSQCLFL*QHFPAV
Trigger: AACAGCTGGGAAATGTTGCCAGAGGAATAAACATTG...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCCTTCTATGGCATTCTTaGCATCGTTATTCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSLLWHS*HRYSVL
Trigger: CAAGACTGAATAACGATGCCAAGAATGCCATAGAAG...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR GCA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCTTGAGCGATTCCAGCTaGATTTGTTTATACAGAACA +
Preference number: 4 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSLSDSS*ICLYRT
Trigger: TGTTCTGTATAAACAAATGCAGCTGGAATCGCTCAA...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS GCA 90 bp AGCATGCCCAACGTGAACCACCAGCCAATGGGCGCATCTTCCAGGTaGCGCTCCCCTCCTGGCCCTGGCGGCAGCTCCCAGGCGACCGCA +
Preference number: 5 (lower is better)
Translates to: SMPNVNHQPMGASSR*RSPPGPGGSSQATA
Trigger: TGCGGTCGCCTGGGAGCTGCCGCCAGGGCCAGGAGGGGAGCGGCACCTGGAAGATGCGCCCATTGGCTGGTGGTTCACGTTGGGCATGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398652.7
CDS CCA 90 bp AGGGGGAAGGCACAATTCAGCCCCAACATAGCACCGGGCGAGCTGTaGCACAGCCTCTCTGTGGGTTGGACACCAGCAATCAGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: RGKAQFSPNIAPGEL*HSLSVGWTPAIRAQ
Trigger: CTGAGCTCTGATTGCTGGTGTCCAACCCACAGAGAGGCTGTGCCACAGCTCGCCCGGTGCTATGTTGGGGCTGAATTGTGCCTTCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CCA 90 bp CTGGCTGGGAGAAGCCATGATCTAGAGTCTGAACCACCTCCTGGGTaGGAGGCAGATCCAGCCGCCAGCACTGGGATCGGGACATCATCA +
Preference number: 5 (lower is better)
Translates to: LAGRSHDLESEPPPG*EADPAASTGIGTSS
Trigger: TGATGATGTCCCGATCCCAGTGCTGGCGGCTGGATCTGCCTCCCACCCAGGAGGTGGTTCAGACTCTAGATCATGGCTTCTCCCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS TCA 90 bp AAGCCAAGTGTCCTCACAAGAAGAAGGGTAGCCCATGGCGGGTCCTaGTGCGGCAGGGAGCTCTCTTCCGGGACACTTTTCAGGACTCCC +
Preference number: 5 (lower is better)
Translates to: KPSVLTRRRVAHGGS*CGRELSSGTLFRTP
Trigger: GGGAGTCCTGAAAAGTGTCCCGGAAGAGAGCTCCCTGCCGCATCAGGACCCGCCATGGGCTACCCTTCTTCTTGTGAGGACACTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CCA 90 bp TCAGTGCCTAGAAAGGAGAGACCATCGAGAAAGACTGGGCACCCGTaGGTTCCGGGAATGCTTGCCCTGAGCCCAGCAGAGCACTGTGAG +
Preference number: 5 (lower is better)
Translates to: SVPRKERPSRKTGHP*VPGMLALSPAEHCE
Trigger: CTCACAGTGCTCTGCTGGGCTCAGGGCAAGCATTCCCGGAACCCACGGGTGCCCAGTCTTTCTCGATGGTCTCTCCTTTCTAGGCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518236.1
CDS TCA 90 bp CGCCAGCACTGGGATCGGGACATCATCAGAAGATGGGTGATGAGCTaGACCAGCAGCCTGTGCTCAGGTCTAGCACAAAGTCATGGAAGT +
Preference number: 5 (lower is better)
Translates to: RQHWDRDIIRRWVMS*TSSLCSGLAQSHGS
Trigger: ACTTCCATGACTTTGTGCTAGACCTGAGCACAGGCTGCTGGTTCAGCTCATCACCCATCTTCTGATGATGTCCCGATCCCAGTGCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS TCA 90 bp TATCCTCAAAGCAGATTTTGGCGTACTTGCTTCTGCCACCTCCGCTaGGTAACCTGTAGGCATAGGTGTCAGATGGGCAGGGAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: YPQSRFWRTCFCHLR*VTCRHRCQMGRESS
Trigger: ACTGGACTCCCTGCCCATCTGACACCTATGCCTACAGGTTACTCAGCGGAGGTGGCAGAAGCAAGTACGCCAAAATCTGCTTTGAGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
ENST00000518236.1
CDS-3UTR CAA 90 bp ACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTGTTCAGATTTTGGCGTACTaGCTTCTGCCACCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: TGVTLRSDHNIAPPGQAVQILAY*LLPPPL
Trigger: CAGCGGAGGTGGCAGAAGCAAGTACGCCAAAATCTG...AACAGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CAA 90 bp CATAAGCCCCCTGAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGCATCGTTATTCAGTCTaGTGCTTCCGTCGTCATAGG +
Preference number: 5 (lower is better)
Translates to: HKPPELLLILPAEGDDCRHRYSV*CFRRHR
Trigger: CCTATGACGACGGAAGCACAAGACTGAATAACGATG...CCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTCAGGGGGCTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CAA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAACCACGAACACCACCTaGAGCAGGCCTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPATTNTT*SRPAER
Trigger: CCTCTCTGCAGGCCTGCTCAAGGTGGTGTTCGTGGT...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398646.3
CDS-3UTR CAA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTACCACGAACACCACCTaGAGCAGGCCAGGGCAAGTT +
Preference number: 5 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSTTNTT*SRPGQV
Trigger: AACTTGCCCTGGCCTGCTCAAGGTGGTGTTCGTGGT...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398652.7
CDS CCA 90 bp ACCCTGCAGTGTCAGCTTCGTTCTTTGGGTATGCAGCCTTCTATCTaGATCTCTGCAGGCCAGCCAGAATATCTGTTGTTCTTAGCATCA +
Preference number: 5 (lower is better)
Translates to: TLQCQLRSLGMQPSI*ISAGQPEYLLFLAS
Trigger: TGATGCTAAGAACAACAGATATTCTGGCTGGCCTGCAGAGATCCAGATAGAAGGCTGCATACCCAAAGAACGAAGCTGACACTGCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
CDS-3UTR CAA 90 bp ATAGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCTTGAATCACTCACATTTTTGCCTTTaGGGGACTGGAGCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: IAPPGQAVSPNPLSSLNHSHFCL*GTGALR
Trigger: CCTCAAAGCTCCAGTCCCCAAAAGGCAAAAATGTGA...GTGATTCAAGCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CAA 90 bp CACACAGGGGTCACACTTCGATCTGATCATAACATAGCTCCACCTGGACAAGCTTCCTCAAAGCAGATTTaGGCGTACTTGCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: HTGVTLRSDHNIAPPGQASSKQI*AYLLLP
Trigger: TGGCAGAAGCAAGTACGCCAAAATCTGCTTTGAGGA...AGCTTGTCCAGGTGGAGCTATGTTATGATCAGATCGAAGTGTGACCCCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CAA 90 bp ATAGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCTTGAATCACTGTCAGCTTCGTTCTTaGGGTATGCAGCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: IAPPGQAVSPNPLSSLNHCQLRS*GMQPSI
Trigger: GATAGAAGGCTGCATACCCAAAGAACGAAGCTGACA...GTGATTCAAGCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCGCTGCTGTGAACGACTaGGTGGCGGCCCTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPAAVND*VAALAL
Trigger: AAGGGCCAGGGCCGCCACCAAGTCGTTCACAGCAGC...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398646.3
CDS-3UTR CAA 90 bp AATGGAATAAAGGTTTTCTCTCTGCAGGGCTGTCTGGACCACACAGGGGTCACACAGCCAGAATATCTGTaGTTCTTAGCATCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: NGIKVFSLQGCLDHTGVTQPEYL*FLASEW
Trigger: CCACTCTGATGCTAAGAACAACAGATATTCTGGCTG...TGTGACCCCTGTGTGGTCCAGACAGCCCTGCAGAGAGAAAACCTTTATTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CAA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATCACATTTTTGCCTTTaGGGGACTGGAGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPASHFCL*GTGAPA
Trigger: GGCTGGTGCTCCAGTCCCCAAAAGGCAAAAATGTGA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398647.7
CDS CCA 90 bp TCTTGTGCTTCCGTCGTCATAGGTCACCATGAAGAGCAGGGATTTTaGAGCAGCACTCTGAATAAACTTTGTCATCGGTCCAGAGTTATC +
Preference number: 5 (lower is better)
Translates to: SCASVVIGHHEEQGF*SSTLNKLCHRSRVI
Trigger: GATAACTCTGGACCGATGACAAAGTTTATTCAGAGTGCTGCTCCAAAATCCCTGCTCTTCATGGTGACCTATGACGACGGAAGCACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
CDS-3UTR CAA 90 bp GAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGAAACTAGGAGGTAACCCTCTTTCCAGCTaGAATCACATCATTCCCTTT +
Preference number: 5 (lower is better)
Translates to: ELLLILPAEGDDCRKLGGNPLSS*NHIIPF
Trigger: AAAGGGAATGATGTGATTCAAGCTGGAAAGAGGGTT...ACCTCCTAGTTTCCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CAA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATCCTCAAAGCAGATTTaGGCGTACTTGCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPASSKQI*AYLLLP
Trigger: TGGCAGAAGCAAGTACGCCAAAATCTGCTTTGAGGA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp AGCTCCACCTGGACAAGCTGTTTCTCCCAACCCTCTTTCCAGCTTGAATCACATTATCAAAACATCGTGTaGCTGTCACATTCCCAGTTA +
Preference number: 5 (lower is better)
Translates to: SSTWTSCFSQPSFQLESHYQNIV*LSHSQL
Trigger: TAACTGGGAATGTGACAGCAACACGATGTTTTGATA...ATGTGATTCAAGCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CAA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCACATCGTTATTCAGTCTaGTGCTTCCGTCGTCATAGG +
Preference number: 5 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAHRYSV*CFRRHR
Trigger: CCTATGACGACGGAAGCACAAGACTGAATAACGATG...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTCATCGTTATTCAGTCTaGTGCTTCCGTCGTCATAGG +
Preference number: 5 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSHRYSV*CFRRHR
Trigger: CCTATGACGACGGAAGCACAAGACTGAATAACGATG...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATGTCAGCTTCGTTCTTaGGGTATGCAGCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPACQLRS*GMQPSI
Trigger: GATAGAAGGCTGCATACCCAAAGAACGAAGCTGACA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp TGGAATAAAGGTTTTCTCTCTGCAGGGCTGTCTGGACCACACAGGGGTCACACTACTGCGTACCAAGATTaGATACAACTAGCAAATGTT +
Preference number: 5 (lower is better)
Translates to: WNKGFLSAGLSGPHRGHTTAYQD*IQLANV
Trigger: AACATTTGCTAGTTGTATCAAATCTTGGTACGCAGT...AGTGTGACCCCTGTGTGGTCCAGACAGCCCTGCAGAGAGAAAACCTTTATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCCAGATTTTGGCGTACTaGCTTCTGCCACCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPQILAY*LLPPPL
Trigger: CAGCGGAGGTGGCAGAAGCAAGTACGCCAAAATCTG...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCACAGCCAGAATATCTGTaGTTCTTAGCATCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAQPEYL*FLASEW
Trigger: CCACTCTGATGCTAAGAACAACAGATATTCTGGCTG...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp GAACTGCTGCTAATTCTCCCAGCAGAAGGAGATGACTGTCGGAAACTAGGAGGTCGATTCCAGCTGCATTaGTTTATACAGAACACATTT +
Preference number: 5 (lower is better)
Translates to: ELLLILPAEGDDCRKLGGRFQLH*FIQNTF
Trigger: AAATGTGTTCTGTATAAACAAATGCAGCTGGAATCG...ACCTCCTAGTTTCCGACAGTCATCTCCTTCTGCTGGGAGAATTAGCAGCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357985.7
CDS-3UTR CAA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGCTTCTATGGCATTCTaGGCATCGTTATTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAASMAF*ASLFSL
Trigger: AAGACTGAATAACGATGCCAAGAATGCCATAGAAGC...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCATATCAAAACATCGTGTaGCTGTCACATTCCCAGTTA +
Preference number: 5 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPAYQNIV*LSHSQL
Trigger: TAACTGGGAATGTGACAGCAACACGATGTTTTGATA...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS TCA 90 bp GTATTTGCTGTTGGTTTAGGTCTTAACTTAACCAACAAACGTCCTTaGACGTTTATGTCAAAGCAGCTAATCAAGCACCTTGTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: VFAVGLGLNLTNKRP*TFMSKQLIKHLVSQ
Trigger: CTGGCTCACAAGGTGCTTGATTAGCTGCTTTGACATAAACGTTCAAGGACGTTTGTTGGTTAAGTTAAGACCTAAACCAACAGCAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398652.7
CDS GCA 90 bp GATCTTTTCTCTCTGAATTTCGGAAGGGAGTTCCAAGCCTTTTGCTaGAATAAATACCCAGCTAGACCTGAATTTCATGTTCCTGATTTC +
Preference number: 5 (lower is better)
Translates to: DLFSLNFGREFQAFC*NKYPARPEFHVPDF
Trigger: GAAATCAGGAACATGAAATTCAGGTCTAGCTGGGTATTTATTGCAGCAAAAGGCTTGGAACTCCCTTCCGAAATTCAGAGAGAAAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
CDS GCA 90 bp GTTGATCTTTTCTCTCTGAATTTCGGAAGGGAGTTCCAAGCCTTTTaGTGCAATAAATACCCAGCTAGACCTGAATTTCATGTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: VDLFSLNFGREFQAF*CNKYPARPEFHVPD
Trigger: ATCAGGAACATGAAATTCAGGTCTAGCTGGGTATTTATTGCAGCAAAAGGCTTGGAACTCCCTTCCGAAATTCAGAGAGAAAAGATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
CDS CCA 90 bp CTGCTTAGGTTAACTGCAGAGTACAACTGTGTCCTTCTTATTGGGTaGGTGCAGGCGTTTTCTATTCTTCGTCTTCACTATCTTTATAAA +
Preference number: 5 (lower is better)
Translates to: LLRLTAEYNCVLLIG*VQAFSILRLHYLYK
Trigger: TTTATAAAGATAGTGAAGACGAAGAATAGAAAACGCCTGCACCCACCCAATAAGAAGGACACAGTTGTACTCTGCAGTTAACCTAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCTCACATTTTTGCCTTTaGGGGACTGGAGCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPSHFCL*GTGALR
Trigger: CCTCAAAGCTCCAGTCCCCAAAAGGCAAAAATGTGA...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR CAA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCATCACATTTTTGCCTTTaGGGGACTGGAGCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPSHFCL*GTGALR
Trigger: CCTCAAAGCTCCAGTCCCCAAAAGGCAAAAATGTGA...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCTCCTCAAAGCAGATTTaGGCGTACTTGCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPSSKQI*AYLLLP
Trigger: TGGCAGAAGCAAGTACGCCAAAATCTGCTTTGAGGA...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCCATCGTTATTCAGTCTaGTGCTTCCGTCGTCATAGG +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPHRYSV*CFRRHR
Trigger: CCTATGACGACGGAAGCACAAGACTGAATAACGATG...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCACGATTCCAGCTGCATTaGTTTATACAGAACACATTT +
Preference number: 5 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPARFQLH*FIQNTF
Trigger: AAATGTGTTCTGTATAAACAAATGCAGCTGGAATCG...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp GCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAGTAGAAAAATAAGATTCTaGAGCGATTCCAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: AIPAAFVYTEHIYSGPCSRKIRF*SDSSCI
Trigger: AATGCAGCTGGAATCGCTCAAGAATCTTATTTTTCT...ACTGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp GAGCGATTCCAGCTGCATTTGTTTATACAGAACACATTTACTCAGGACCCTGCAACTGCGTACCAAGATTaGATACAACTAGCAAATGTT +
Preference number: 5 (lower is better)
Translates to: ERFQLHLFIQNTFTQDPATAYQD*IQLANV
Trigger: AACATTTGCTAGTTGTATCAAATCTTGGTACGCAGT...TGCAGGGTCCTGAGTAAATGTGTTCTGTATAAACAAATGCAGCTGGAATCGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS GCA 90 bp CAGTCAAGAGTCAGTGCCACCTTCATACATATCAAAACATCGTGTTaGTGTCACATTCCCAGTTACATAGTTGACAATGGCAATGTTTAT +
Preference number: 5 (lower is better)
Translates to: QSRVSATFIHIKTSC*CHIPSYIVDNGNVY
Trigger: ATAAACATTGCCATTGTCAACTATGTAACTGGGAATGTGACAGCAACACGATGTTTTGATATGTATGAAGGTGGCACTGACTCTTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCCAGCCAGAATATCTGTaGTTCTTAGCATCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPQPEYL*FLASEW
Trigger: CCACTCTGATGCTAAGAACAACAGATATTCTGGCTG...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS GCA 90 bp CATCGGTCCAGAGTTATCACCTTCATACATATCAAAACATCGTGTTaGTGTCACATTCCCAGTTACATAGTTGACAATGGCAATGTTTAT +
Preference number: 5 (lower is better)
Translates to: HRSRVITFIHIKTSC*CHIPSYIVDNGNVY
Trigger: ATAAACATTGCCATTGTCAACTATGTAACTGGGAATGTGACAGCAACACGATGTTTTGATATGTATGAAGGTGATAACTCTGGACCGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCGCTTCTATGGCATTCTaGGCATCGTTATTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPASMAF*ASLFSL
Trigger: AAGACTGAATAACGATGCCAAGAATGCCATAGAAGC...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp GCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCAGCTTCTATGGCATTCTaGGCATCGTTATTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: AYQDLIQLANVHWFTTNPASMAF*ASLFSL
Trigger: AAGACTGAATAACGATGCCAAGAATGCCATAGAAGC...TGGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCCAGCCAGAATATCTGTaGTTCTTAGCATCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSQPEYL*FLASEW
Trigger: CCACTCTGATGCTAAGAACAACAGATATTCTGGCTG...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCTATCAAAACATCGTGTaGCTGTCACATTCCCAGTTA +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPYQNIV*LSHSQL
Trigger: TAACTGGGAATGTGACAGCAACACGATGTTTTGATA...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCAACCAACAAACGTCCTaGAACGTTTATGTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPNQQTS*NVYVKA
Trigger: TGCTTTGACATAAACGTTCAAGGACGTTTGTTGGTT...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398652.7
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCCGATTCCAGCTGCATTaGTTTATACAGAACACATTT +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPRFQLH*FIQNTF
Trigger: AAATGTGTTCTGTATAAACAAATGCAGCTGGAATCG...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCAGAAAAATAAGATTCTaGAGCGATTCCAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPRKIRF*SDSSCI
Trigger: AATGCAGCTGGAATCGCTCAAGAATCTTATTTTTCT...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp TGCGTACCAAGATTTGATACAACTAGCAAATGTTCATTGGTTTACAACAAACCCACTGCGTACCAAGATTaGATACAACTAGCAAATGTT +
Preference number: 5 (lower is better)
Translates to: CVPRFDTTSKCSLVYNKPTAYQD*IQLANV
Trigger: AACATTTGCTAGTTGTATCAAATCTTGGTACGCAGT...GGGTTTGTTGTAAACCAATGAACATTTGCTAGTTGTATCAAATCTTGGTACGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCCGATTCCAGCTGCATTaGTTTATACAGAACACATTT +
Preference number: 5 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSRFQLH*FIQNTF
Trigger: AAATGTGTTCTGTATAAACAAATGCAGCTGGAATCG...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCAGAAAAATAAGATTCTaGAGCGATTCCAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSRKIRF*SDSSCI
Trigger: AATGCAGCTGGAATCGCTCAAGAATCTTATTTTTCT...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS-3UTR CAA 90 bp ACTCATCAAATATGGGCTGTTGGATTTAGAAAAATAAGATTCTTGAGCGATTCCACTGCGTACCAAGATTaGATACAACTAGCAAATGTT +
Preference number: 5 (lower is better)
Translates to: THQIWAVGFRKIRFLSDSTAYQD*IQLANV
Trigger: AACATTTGCTAGTTGTATCAAATCTTGGTACGCAGT...GGAATCGCTCAAGAATCTTATTTTTCTAAATCCAACAGCCCATATTTGATGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS CCA 72 bp AGTCTCGGGCTCCTGCCTTCGCACGGTGGAAAAAGATaGCGCCAGGGTGCCCCAGCCATGCCCGCCGAGCCC +
Preference number: 6 (lower is better)
Translates to: SLGLLPSHGGKR*RQGAPAMPAEP
Trigger: GGGCTCGGCGGGCATGGCTGGGGCACCCTGGCGCCATCTTTTTCCACCGTGCGAAGGCAGGAGCCCGAGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CCA 72 bp ACCTCCTGGGTGGGAGGCAGATCCAGCCGCCAGCACTaGGATCGGGACATCATCAGAAGATGGGTGATGAGC +
Preference number: 6 (lower is better)
Translates to: TSWVGGRSSRQH*DRDIIRRWVMS
Trigger: GCTCATCACCCATCTTCTGATGATGTCCCGATCCCAGTGCTGGCGGCTGGATCTGCCTCCCACCCAGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CAA 90 bp CCCCAACATAGCACCGGGCGAGCTGTGGCACAGCCTCTCTGTGGGTaGGACACCAGCAATCAGAGCTCAGTCCTGGGGATGAAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: PQHSTGRAVAQPLCG*DTSNQSSVLGMKAG
Trigger: TCCTGCTTTCATCCCCAGGACTGAGCTCTGATTGCTGGTGTCCAACCCACAGAGAGGCTGTGCCACAGCTCGCCCGGTGCTATGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS TCA 72 bp GTCCTCACAAGAAGAAGGGTAGCCCATGGCGGGTCCTaGTGCGGCAGGGAGCTCTCTTCCGGGACACTTTTC +
Preference number: 6 (lower is better)
Translates to: VLTRRRVAHGGS*CGRELSSGTLF
Trigger: GAAAAGTGTCCCGGAAGAGAGCTCCCTGCCGCATCAGGACCCGCCATGGGCTACCCTTCTTCTTGTGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CCA 72 bp AGCAATCAGAGCTCAGTCCTGGGGATGAAAGCAGGATaGGCAGGAGCCGAGGCAGCCTGTCAAGACAGAGGC +
Preference number: 6 (lower is better)
Translates to: SNQSSVLGMKAG*AGAEAACQDRG
Trigger: GCCTCTGTCTTGACAGGCTGCCTCGGCTCCTGCCCATCCTGCTTTCATCCCCAGGACTGAGCTCTGATTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CCA 72 bp GCACAATTCAGCCCCAACATAGCACCGGGCGAGCTGTaGCACAGCCTCTCTGTGGGTTGGACACCAGCAATC +
Preference number: 6 (lower is better)
Translates to: AQFSPNIAPGEL*HSLSVGWTPAI
Trigger: GATTGCTGGTGTCCAACCCACAGAGAGGCTGTGCCACAGCTCGCCCGGTGCTATGTTGGGGCTGAATTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CCA 72 bp AGAAAGGAGAGACCATCGAGAAAGACTGGGCACCCGTaGGTTCCGGGAATGCTTGCCCTGAGCCCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: RKERPSRKTGHP*VPGMLALSPAE
Trigger: CTCTGCTGGGCTCAGGGCAAGCATTCCCGGAACCCACGGGTGCCCAGTCTTTCTCGATGGTCTCTCCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518236.1
CDS CCA 72 bp GCGGATGCTATAGGCAGCACTGGACAGGGGTGCATCTaGAATGAGCTCTGCGAGCAGGTACCCCGAATACCA +
Preference number: 6 (lower is better)
Translates to: ADAIGSTGQGCI*NELCEQVPRIP
Trigger: TGGTATTCGGGGTACCTGCTCGCAGAGCTCATTCCAGATGCACCCCTGTCCAGTGCTGCCTATAGCATCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398652.7
ENST00000479810.6
ENST00000518236.1
CDS CCA 72 bp GGGATGCATCCAATGACCTCTAGGCTGGGGACAATCTaGAGTGCAGCATGCAGCTGGCTGGGAGAAGCCATG +
Preference number: 6 (lower is better)
Translates to: GMHPMTSRLGTI*SAACSWLGEAM
Trigger: CATGGCTTCTCCCAGCCAGCTGCATGCTGCACTCCAGATTGTCCCCAGCCTAGAGGTCATTGGATGCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CCA 72 bp ATGGGCAGGGAGTCCAGTGGTCACATTTTTGCCTTTTaGGGACTGGAGCACCAGCCAATGGGCGCATCTTCC +
Preference number: 6 (lower is better)
Translates to: MGRESSGHIFAF*GLEHQPMGASS
Trigger: GGAAGATGCGCCCATTGGCTGGTGCTCCAGTCCCCAAAAGGCAAAAATGTGACCACTGGACTCCCTGCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398647.7
CDS CAA 90 bp TGGAGGCTGGAAGTCCAAGATCAAGTTTCCTCTGAGCCTCTCTCCTaGGCTTGTGGATGGCATCTTCTCCCTGTGTCCTCACAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: WRLEVQDQVSSEPLS*ACGWHLLPVSSQGL
Trigger: GAGGCCCTGTGAGGACACAGGGAGAAGATGCCATCCACAAGCCAAGGAGAGAGGCTCAGAGGAAACTTGATCTTGGACTTCCAGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS GCA 72 bp TCAGGACCCTGCAGTGTCAGCTTCGTTCTTTGGGTATaGAGCCTTCTATCTGGATCTCTGCAGGCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: SGPCSVSFVLWV*SLLSGSLQASQ
Trigger: CTGGCTGGCCTGCAGAGATCCAGATAGAAGGCTGCATACCCAAAGAACGAAGCTGACACTGCAGGGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
CDS TCA 72 bp AGCAGATTTTGGCGTACTTGCTTCTGCCACCTCCGCTaGGTAACCTGTAGGCATAGGTGTCAGATGGGCAGG +
Preference number: 6 (lower is better)
Translates to: SRFWRTCFCHLR*VTCRHRCQMGR
Trigger: CCTGCCCATCTGACACCTATGCCTACAGGTTACTCAGCGGAGGTGGCAGAAGCAAGTACGCCAAAATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
ENST00000518236.1
CDS CAA 72 bp GAAGTCCAAGATCAAGTTTCCTCTGAGCCTCTCTCCTaGGCTTGTGGATGGCATCTTCTCCCTGTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: EVQDQVSSEPLS*ACGWHLLPVSS
Trigger: TGAGGACACAGGGAGAAGATGCCATCCACAAGCCAAGGAGAGAGGCTCAGAGGAAACTTGATCTTGGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CCA 72 bp GACCCTATCTCCAGATCCAGTCACATTCTGAGGTACTaGGCAGGGGTTAGGACTACAACATGTAAATGGGGT +
Preference number: 6 (lower is better)
Translates to: DPISRSSHILRY*AGVRTTTCKWG
Trigger: ACCCCATTTACATGTTGTAGTCCTAACCCCTGCCCAGTACCTCAGAATGTGACTGGATCTGGAGATAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CCA 72 bp TCCGTCGTCATAGGTCACCATGAAGAGCAGGGATTTTaGAGCAGCACTCTGAATAAACTTTGTCATCGGTCC +
Preference number: 6 (lower is better)
Translates to: SVVIGHHEEQGF*SSTLNKLCHRS
Trigger: GGACCGATGACAAAGTTTATTCAGAGTGCTGCTCCAAAATCCCTGCTCTTCATGGTGACCTATGACGACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
CDS CCA 72 bp TGTCAGCTTCGTTCTTTGGGTATGCAGCCTTCTATCTaGATCTCTGCAGGCCAGCCAGAATATCTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: CQLRSLGMQPSI*ISAGQPEYLLF
Trigger: GAACAACAGATATTCTGGCTGGCCTGCAGAGATCCAGATAGAAGGCTGCATACCCAAAGAACGAAGCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
CDS TCA 72 bp CAGCTACATGAAGGAATAGGTAACGGTGGCCCCAGCTaGACAAAAACAAACATGTGGACACGACAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: QLHEGIGNGGPS*TKTNMWTRQRR
Trigger: TCTTCTCTGTCGTGTCCACATGTTTGTTTTTGTTCAGCTGGGGCCACCGTTACCTATTCCTTCATGTAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS TCA 72 bp GTCACCATGAAGAGCAGGGATTTTGGAGCAGCACTCTaGATAAACTTTGTCATCGGTCCAGAGTTATCGCTG +
Preference number: 6 (lower is better)
Translates to: VTMKSRDFGAAL*INFVIGPELSL
Trigger: CAGCGATAACTCTGGACCGATGACAAAGTTTATTCAGAGTGCTGCTCCAAAATCCCTGCTCTTCATGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS GCA 72 bp GACAAAATCCAGGCAGGCAGCATCATTTCCTCAGGCTaGTGTAACAAATTAACACCAACTGGGTGGCTTCAA +
Preference number: 6 (lower is better)
Translates to: DKIQAGSIISSG*CNKLTPTGWLQ
Trigger: TTGAAGCCACCCAGTTGGTGTTAATTTGTTACAGCAGCCTGAGGAAATGATGCTGCCTGCCTGGATTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS TCA 72 bp GTCACCATGAAGAGCAGGGATTTTGGAGCAGCACTCTaGATAAACTTTGTCATCGGTCCAGAGTTATCACCT +
Preference number: 6 (lower is better)
Translates to: VTMKSRDFGAAL*INFVIGPELSP
Trigger: AGGTGATAACTCTGGACCGATGACAAAGTTTATTCAGAGTGCTGCTCCAAAATCCCTGCTCTTCATGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS GCA 72 bp CTGCAGAGTACAACTGTGTCCTTCTTATTGGGTGGGTaGAGGCGTTTTCTATTCTTCGTCTTCACTATCTTT +
Preference number: 6 (lower is better)
Translates to: LQSTTVSFLLGG*RRFLFFVFTIF
Trigger: AAAGATAGTGAAGACGAAGAATAGAAAACGCCTGCACCCACCCAATAAGAAGGACACAGTTGTACTCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS GCA 72 bp GTCAGTGCCACCTTCATACATATCAAAACATCGTGTTaGTGTCACATTCCCAGTTACATAGTTGACAATGGC +
Preference number: 6 (lower is better)
Translates to: VSATFIHIKTSC*CHIPSYIVDNG
Trigger: GCCATTGTCAACTATGTAACTGGGAATGTGACAGCAACACGATGTTTTGATATGTATGAAGGTGGCACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS CCA 72 bp TTAACTGCAGAGTACAACTGTGTCCTTCTTATTGGGTaGGTGCAGGCGTTTTCTATTCTTCGTCTTCACTAT +
Preference number: 6 (lower is better)
Translates to: LTAEYNCVLLIG*VQAFSILRLHY
Trigger: ATAGTGAAGACGAAGAATAGAAAACGCCTGCACCCACCCAATAAGAAGGACACAGTTGTACTCTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479810.6
CDS GCA 72 bp TCTCTGAATTTCGGAAGGGAGTTCCAAGCCTTTTGCTaGAATAAATACCCAGCTAGACCTGAATTTCATGTT +
Preference number: 6 (lower is better)
Translates to: SLNFGREFQAFC*NKYPARPEFHV
Trigger: AACATGAAATTCAGGTCTAGCTGGGTATTTATTGCAGCAAAAGGCTTGGAACTCCCTTCCGAAATTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
CDS GCA 72 bp TTCTCTCTGAATTTCGGAAGGGAGTTCCAAGCCTTTTaGTGCAATAAATACCCAGCTAGACCTGAATTTCAT +
Preference number: 6 (lower is better)
Translates to: FSLNFGREFQAF*CNKYPARPEFH
Trigger: ATGAAATTCAGGTCTAGCTGGGTATTTATTGCAGCAAAAGGCTTGGAACTCCCTTCCGAAATTCAGAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
ENST00000479810.6
CDS GCA 72 bp AGAGTTATCACCTTCATACATATCAAAACATCGTGTTaGTGTCACATTCCCAGTTACATAGTTGACAATGGC +
Preference number: 6 (lower is better)
Translates to: RVITFIHIKTSC*CHIPSYIVDNG
Trigger: GCCATTGTCAACTATGTAACTGGGAATGTGACAGCAACACGATGTTTTGATATGTATGAAGGTGATAACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357985.7
ENST00000398646.3
ENST00000398647.7
ENST00000398652.7
CDS GCA 72 bp TTTCTTACCACCTTCATACATATCAAAACATCGTGTTaGTGTCACATTCCCAGTTACATAGTTGACAATGGC +
Preference number: 6 (lower is better)
Translates to: FLTTFIHIKTSC*CHIPSYIVDNG
Trigger: GCCATTGTCAACTATGTAACTGGGAATGTGACAGCAACACGATGTTTTGATATGTATGAAGGTGGTAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518236.1