Pregenerated sensors for FAM30C (Homo sapiens)
Ensembl gene IDs: ENSG00000259698Ensembl transcript IDs: ENST00000561158.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCTGCTGTAAAGGCTGCAACTGCACATCCTTCCTCTGTCCCTTCCTaGTGTCTGTGTGTCTCCTGTGGCCAGGAAGGTCTTTCTCGGGAC | + |
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Preference number: 5 (lower is better) Translates to: SAVKAATAHPSSVPS*CLCVSCGQEGLSRD Trigger: GTCCCGAGAAAGACCTTCCTGGCCACAGGAGACACACAGACATCAGGAAGGGACAGAGGAAGGATGTGCAGTTGCAGCCTTTACAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561158.1 |
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| CDS GCA 90 bp | ACTGACCGTTTGCTCCAACTCTCGACCTCCCATTCTCAGAGCATCTaGTGTAAAGGCTGCAACTGCACATCCTTCCTCTGTCCCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: TDRLLQLSTSHSQSI*CKGCNCTSFLCPFL Trigger: CAGGAAGGGACAGAGGAAGGATGTGCAGTTGCAGCCTTTACAGCAGATGCTCTGAGAATGGGAGGTCGAGAGTTGGAGCAAACGGTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561158.1 |
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| CDS GCA 90 bp | CTCCAACTCTCGACCTCCCATTCTCAGAGCATCTGCTGTAAAGGCTaGAACTGCACATCCTTCCTCTGTCCCTTCCTGATGTCTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LQLSTSHSQSICCKG*NCTSFLCPFLMSVC Trigger: ACACACAGACATCAGGAAGGGACAGAGGAAGGATGTGCAGTTGCAGCCTTTACAGCAGATGCTCTGAGAATGGGAGGTCGAGAGTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561158.1 |
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| CDS GCA 72 bp | TCGACCTCCCATTCTCAGAGCATCTGCTGTAAAGGCTaGAACTGCACATCCTTCCTCTGTCCCTTCCTGATG | + |
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Preference number: 6 (lower is better) Translates to: STSHSQSICCKG*NCTSFLCPFLM Trigger: CATCAGGAAGGGACAGAGGAAGGATGTGCAGTTGCAGCCTTTACAGCAGATGCTCTGAGAATGGGAGGTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561158.1 |
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| CDS GCA 72 bp | TTGCTCCAACTCTCGACCTCCCATTCTCAGAGCATCTaGTGTAAAGGCTGCAACTGCACATCCTTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LLQLSTSHSQSI*CKGCNCTSFLC Trigger: ACAGAGGAAGGATGTGCAGTTGCAGCCTTTACAGCAGATGCTCTGAGAATGGGAGGTCGAGAGTTGGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561158.1 |
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