Pregenerated sensors for FAM24B (Homo sapiens)
Ensembl gene IDs: ENSG00000213185Ensembl transcript IDs: ENST00000368896.1, ENST00000368898.8, ENST00000462859.5, ENST00000489000.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGACCATAGACGCTCCCCATCCGCCCAGCAACCGTGGTCCATGCTaGCTGCGTCCACCGCCAGCGTCGAAAAACCGCCGTGGTGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: LTIDAPHPPSNRGPC*LRPPPASKNRRGAR Trigger: GCGGGCACCACGGCGGTTTTTCGACGCTGGCGGTGGACGCAGGCAGCATGGACCACGGTTGCTGGGCGGATGGGGAGCGTCTATGGTCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000368896.1 ENST00000368898.8 ENST00000462859.5 ENST00000489000.1 |
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| CDS CCA 90 bp | TCTAAGGCAACTGACCATAGACGCTCCCCATCCGCCCAGCAACCGTaGTCCATGCTGCCTGCGTCCACCGCCAGCGTCGAAAAACCGCCG | + |
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Preference number: 5 (lower is better) Translates to: SKATDHRRSPSAQQP*SMLPASTASVEKPP Trigger: CGGCGGTTTTTCGACGCTGGCGGTGGACGCAGGCAGCATGGACCACGGTTGCTGGGCGGATGGGGAGCGTCTATGGTCAGTTGCCTTAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000368896.1 ENST00000368898.8 ENST00000462859.5 ENST00000489000.1 |
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| CDS GCA 90 bp | TGCAGATCCCCCGGCGGTGCAGGCACGATGAGGAAGATCACAATCTaGCACGCACTGGGCTCTGGGATTTGCCCTCTAACTCACAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: CRSPGGAGTMRKITI*HALGSGICPLTHRL Trigger: AAGCCTGTGAGTTAGAGGGCAAATCCCAGAGCCCAGTGCGTGGCAGATTGTGATCTTCCTCATCGTGCCTGCACCGCCGGGGGATCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489000.1 |
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| CDS CCA 90 bp | CAAAATGTGACAAGACTGAGTCTGTCAAATCAACCTCTCATTTCTTaGGAGGCATTCTTCTCATACTCACATGATTCAAGAGAAGTAACA | + |
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Preference number: 5 (lower is better) Translates to: QNVTRLSLSNQPLIS*EAFFSYSHDSREVT Trigger: TGTTACTTCTCTTGAATCATGTGAGTATGAGAAGAATGCCTCCCAAGAAATGAGAGGTTGATTTGACAGACTCAGTCTTGTCACATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489000.1 |
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| CDS GCA 72 bp | CTCCCCATCCGCCCAGCAACCGTGGTCCATGCTGCCTaGGTCCACCGCCAGCGTCGAAAAACCGCCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LPIRPATVVHAA*VHRQRRKTAVV Trigger: CACCACGGCGGTTTTTCGACGCTGGCGGTGGACGCAGGCAGCATGGACCACGGTTGCTGGGCGGATGGGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000368896.1 ENST00000368898.8 ENST00000462859.5 ENST00000489000.1 |
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| CDS GCA 72 bp | GACGCTCCCCATCCGCCCAGCAACCGTGGTCCATGCTaGCTGCGTCCACCGCCAGCGTCGAAAAACCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: DAPHPPSNRGPC*LRPPPASKNRR Trigger: ACGGCGGTTTTTCGACGCTGGCGGTGGACGCAGGCAGCATGGACCACGGTTGCTGGGCGGATGGGGAGCGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000368896.1 ENST00000368898.8 ENST00000462859.5 ENST00000489000.1 |
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| CDS CCA 72 bp | ACTGACCATAGACGCTCCCCATCCGCCCAGCAACCGTaGTCCATGCTGCCTGCGTCCACCGCCAGCGTCGAA | + |
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Preference number: 6 (lower is better) Translates to: TDHRRSPSAQQP*SMLPASTASVE Trigger: TTCGACGCTGGCGGTGGACGCAGGCAGCATGGACCACGGTTGCTGGGCGGATGGGGAGCGTCTATGGTCAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368896.1 ENST00000368898.8 ENST00000462859.5 ENST00000489000.1 |
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| CDS TCA 72 bp | GTGATCCATGCAGATCCCCCGGCGGTGCAGGCACGATaGGGAAGATCACAATCTGCCACGCACTGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: VIHADPPAVQAR*GRSQSATHWAL Trigger: CAGAGCCCAGTGCGTGGCAGATTGTGATCTTCCTCATCGTGCCTGCACCGCCGGGGGATCTGCATGGATCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489000.1 |
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| CDS GCA 72 bp | CCCGGCGGTGCAGGCACGATGAGGAAGATCACAATCTaGCACGCACTGGGCTCTGGGATTTGCCCTCTAACT | + |
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Preference number: 6 (lower is better) Translates to: PGGAGTMRKITI*HALGSGICPLT Trigger: AGTTAGAGGGCAAATCCCAGAGCCCAGTGCGTGGCAGATTGTGATCTTCCTCATCGTGCCTGCACCGCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489000.1 |
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| CDS GCA 72 bp | ATGTTCTACCTTATCAGTGCCTGTCTAGGTGATCCATaGAGATCCCCCGGCGGTGCAGGCACGATGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: MFYLISACLGDP*RSPGGAGTMRK Trigger: CTTCCTCATCGTGCCTGCACCGCCGGGGGATCTGCATGGATCACCTAGACAGGCACTGATAAGGTAGAACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489000.1 |
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| CDS GCA 72 bp | AAGATCACAATCTGCCACGCACTGGGCTCTGGGATTTaGCCTCTAACTCACAGGCTTAACTTCCACAAAATG | + |
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Preference number: 6 (lower is better) Translates to: KITICHALGSGI*PLTHRLNFHKM Trigger: CATTTTGTGGAAGTTAAGCCTGTGAGTTAGAGGGCAAATCCCAGAGCCCAGTGCGTGGCAGATTGTGATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489000.1 |
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| CDS TCA 72 bp | CAGGTTCCTTTGCAGCTTTTAGCGCGTTGTGTATTTTaGAGTAAAGACAGAGCACGACAACTATCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: QVPLQLLARCVF*SKDRARQLSAG Trigger: TCCTGCTGATAGTTGTCGTGCTCTGTCTTTACTTCAAAATACACAACGCGCTAAAAGCTGCAAAGGAACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368896.1 ENST00000368898.8 |
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