Pregenerated sensors for FAM240B (Homo sapiens)
Ensembl gene IDs: ENSG00000283329Ensembl transcript IDs: ENST00000637493.1, ENST00000637691.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTGCGGAGGGGATaGAGCAGGATAATAACTCCCATTAGCACTGGGGGAGGTTTCACA | + |
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Preference number: 2 (lower is better) Translates to: RPIPLAVILSSVRRG*SRIITPISTGGGFT Trigger: TGTGAAACCTCCCCCAGTGCTAATGGGAGTTATTATCCTGCTCAATCCCCTCCGCACAGAGGACAGGATGACCGCAAGTGGGATAGGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCCAGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATTGCCCTCGGTGCGTCCTATCCCACTTaGGGTCATCCTGTCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: FFQDTWQSQIFIKVIALGASYPT*GHPVLC Trigger: ACAGAGGACAGGATGACCGCAAGTGGGATAGGACGC...ACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCTGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAGTTACATTTCTGTGTTCACAAAAAGCGGGGAAAGAAGGACAAGATTTTGGCTACATGGGTCTGTaGGACCTGGAGAGTGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: QAVTFLCSQKAGKEGQDFGYMGL*DLESAN Trigger: ATTAGCACTCTCCAGGTCTCACAGACCCATGTAGCC...AAAATCTTGTCCTTCTTTCCCCGCTTTTTGTGAACACAGAAATGTAACTGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| 3UTR-3UTR CAA 90 bp | TTTTTCCAGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATTGCCCTCGGTGGTCGCTTGCTATCTTaGAAGTCGGTGAGGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: FFQDTWQSQIFIKVIALGGRLLS*KSVRQA Trigger: TGCCTGCCTCACCGACTTCAAAGATAGCAAGCGACC...ACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCTGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| 3UTR-3UTR CAA 90 bp | AATGACAAGGAAATGTGGAAATATACTAGGCTACATGGGTCTGTGAGACCTGGAAGCGTCCTATCCCACTaGCGGTCATCCTGTCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: NDKEMWKYTRLHGSVRPGSVLSH*RSSCPL Trigger: CAGAGGACAGGATGACCGCAAGTGGGATAGGACGCT...TCCAGGTCTCACAGACCCATGTAGCCTAGTATATTTCCACATTTCCTTGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| 3UTR-3UTR CAA 90 bp | CAAGCAGTTACATTTCTGTGTTCACAAAAAGCGGGGAAAGAAGGACAAGATTTTTCTGTGCGGAGGGGATaGAGCAGGATAATAACTCCC | + |
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Preference number: 3 (lower is better) Translates to: QAVTFLCSQKAGKEGQDFSVRRG*SRIITP Trigger: GGGAGTTATTATCCTGCTCAATCCCCTCCGCACAGA...AAAATCTTGTCCTTCTTTCCCCGCTTTTTGTGAACACAGAAATGTAACTGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR TCA 90 bp | CAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTGCGGAGGGGATTGAGGGCTACATGGGTCTGTaGGACCTGGAGAGTGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: QASYPTCGHPVLCAEGIEGYMGL*DLESAN Trigger: ATTAGCACTCTCCAGGTCTCACAGACCCATGTAGCC...CTCAATCCCCTCCGCACAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR TCA 90 bp | CAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTGCGGAGGGGATTGAGAGCCTTCCCTCGTGGTaGGAGATGGCTCTAAACAAA | + |
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Preference number: 4 (lower is better) Translates to: QASYPTCGHPVLCAEGIESLPSW*EMALNK Trigger: TTTGTTTAGAGCCATCTCTCACCACGAGGGAAGGCT...CTCAATCCCCTCCGCACAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR TCA 90 bp | CTTTTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTCCCGGGCCTGCTCTTaGTTCCTCAGGTCCGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LLLNSPSVLSHLRSSCPLSRACS*FLRSGS Trigger: TGAGCCGGACCTGAGGAATCAAGAGCAGGCCCGGGA...CAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR GCA 90 bp | TTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTGCTCAGTCCGCGGTGTGTaGCGGCTTTTCCTTCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: LLNSPSVLSHLRSSCPLCSVRGV*RLFLLN Trigger: GTTGAGAAGGAAAAGCCGGCACACACCGCGGACTGA...GCACAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR TCA 90 bp | CTTTTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGGGCTACATGGGTCTGTaGGACCTGGAGAGTGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: LLLNSPSVLSHLRSSCPLGYMGL*DLESAN Trigger: ATTAGCACTCTCCAGGTCTCACAGACCCATGTAGCC...CAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR GCA 90 bp | AGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATTGCCCTCGGTAAGCTTAGCGTCCTATCCCACTTaGGGTCATCCTGTCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RTPGKAKFSSRSLPSVSLASYPT*GHPVLC Trigger: ACAGAGGACAGGATGACCGCAAGTGGGATAGGACGC...TAAGCTTACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CCA 90 bp | TTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTGCGGCGAGCTTCTGTTTTaGCAGGTCCCACAAGTACTA | + |
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Preference number: 4 (lower is better) Translates to: LLNSPSVLSHLRSSCPLCGELLF*QVPQVL Trigger: TAGTACTTGTGGGACCTGCCAAAACAGAAGCTCGCC...GCACAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR TCA 90 bp | CCATTAGCACTGGGGGAGGTTTCACATGTAAATCCCCTAGCAAATGGAAGCACAGTCCCACAAGTACTATaGCTTGGCCTGAACCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: PLALGEVSHVNPLANGSTVPQVL*LGLNQE Trigger: CTCTTGGTTCAGGCCAAGTCATAGTACTTGTGGGAC...TGTGCTTCCATTTGCTAGGGGATTTACATGTGAAACCTCCCCCAGTGCTAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR TCA 90 bp | CCATTAGCACTGGGGGAGGTTTCACATGTAAATCCCCTAGCAAATGGAAGCACACCACAGATGCTGTCCTaGAATCACATTGTTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PLALGEVSHVNPLANGSTPQMLS*NHIVAA Trigger: GGCTGCAACAATGTGATTTCAGGACAGCATCTGTGG...TGTGCTTCCATTTGCTAGGGGATTTACATGTGAAACCTCCCCCAGTGCTAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR GCA 90 bp | GTTTCACATGTAAATCCCCTAGCAAATGGAAGCACAAATAGAGAGCGTCCTGTTGATACCCGGCTAGGGTaGAAAGGAGGGCAAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: VSHVNPLANGSTNRERPVDTRLG*KGGQDS Trigger: GGAGTCTTGCCCTCCTTTGCACCCTAGCCGGGTATC...AACAGGACGCTCTCTATTTGTGCTTCCATTTGCTAGGGGATTTACATGTGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR GCA 90 bp | GAGGTTTCACATGTAAATCCCCTAGCAAATGGAAGCACAAATAGAGAGCGTCCTGCGTCCTATCCCACTTaGGGTCATCCTGTCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: EVSHVNPLANGSTNRERPASYPT*GHPVLC Trigger: ACAGAGGACAGGATGACCGCAAGTGGGATAGGACGC...AGGACGCTCTCTATTTGTGCTTCCATTTGCTAGGGGATTTACATGTGAAACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CCA 90 bp | TTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTGCTGGGTCTGTGAGACCTaGAGAGTGCTAATTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LLNSPSVLSHLRSSCPLCWVCET*RVLIPR Trigger: TCTTGGAATTAGCACTCTCCAGGTCTCACAGACCCA...GCACAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR TCA 90 bp | CTTTTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGCTGAACCAAGAGAGATaGTTTAGAGCAGAGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLNSPSVLSHLRSSCPLLNQER*FRAEAG Trigger: TCCAGCCTCTGCTCTAAATCATCTCTCTTGGTTCAG...CAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR TCA 90 bp | TTCCAGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATTGCCCTCGGTAAGAAGCTTTTGAGCTCATaGCAAGTTCCACAGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FQDTWQSQIFIKVIALGKKLLSS*QVPQQK Trigger: CTTCTGCTGTGGAACTTGTCATGAGCTCAAAAGCTT...CTTACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR GCA 90 bp | AAGGTCATTGCCCTCGGTAAGCTTAGAGAAAACACTTCAAATGTCTCAAGACTTTCAGTCCGCGGTGTGTaGCGGCTTTTCCTTCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: KVIALGKLRENTSNVSRLSVRGV*RLFLLN Trigger: GTTGAGAAGGAAAAGCCGGCACACACCGCGGACTGA...AAGTCTTGAGACATTTGAAGTGTTTTCTCTAAGCTTACCGAGGGCAATGACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR TCA 90 bp | TTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTGCCCTTTCAAGGTCATTTaGGCCAAATTAGTACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LLNSPSVLSHLRSSCPLCPFKVI*AKLVPE Trigger: TTCTGGTACTAATTTGGCTCAAATGACCTTGAAAGG...GCACAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR TCA 90 bp | CTTTTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTACTATGACTTGGCCTaGACCAAGAGAGATGATTTA | + |
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Preference number: 4 (lower is better) Translates to: LLLNSPSVLSHLRSSCPLYYDLA*TKRDDL Trigger: TAAATCATCTCTCTTGGTTCAGGCCAAGTCATAGTA...CAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR GCA 90 bp | CTTTTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGCTGAAATCACATTGTTaGAGCCCCTATATAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LLLNSPSVLSHLRSSCPLLKSHC*SPYIRS Trigger: ACTCCTTATATAGGGGCTGCAACAATGTGATTTCAG...CAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR GCA 90 bp | CTGCAAGCAGTTACATTTCTGTGTTCACAAAAAGCGGGGAAAGAAGGACAAGATCAGGAAGGCCACAGATaGTGTCCTGAAATCACATTG | + |
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Preference number: 4 (lower is better) Translates to: LQAVTFLCSQKAGKEGQDQEGHR*CPEITL Trigger: CAATGTGATTTCAGGACAGCATCTGTGGCCTTCCTG...ATCTTGTCCTTCTTTCCCCGCTTTTTGTGAACACAGAAATGTAACTGCTTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR CCA 90 bp | TTTTTCCAGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATTGCCCTCGGTACAAGTACTATGACTTaGCCTGAACCAAGAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: FFQDTWQSQIFIKVIALGTSTMT*PEPREM Trigger: CATCTCTCTTGGTTCAGGCCAAGTCATAGTACTTGT...ACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCTGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR CCA 90 bp | AATGACAAGGAAATGTGGAAATATACTAGGCTACATGGGTCTGTGAGACCTGGATGGGTCTGTGAGACCTaGAGAGTGCTAATTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: NDKEMWKYTRLHGSVRPGWVCET*RVLIPR Trigger: TCTTGGAATTAGCACTCTCCAGGTCTCACAGACCCA...TCCAGGTCTCACAGACCCATGTAGCCTAGTATATTTCCACATTTCCTTGTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR TCA 90 bp | CTGCAAGCAGTTACATTTCTGTGTTCACAAAAAGCGGGGAAAGAAGGACAAGATAAGCTTTTGAGCTCATaGCAAGTTCCACAGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LQAVTFLCSQKAGKEGQDKLLSS*QVPQQK Trigger: CTTCTGCTGTGGAACTTGTCATGAGCTCAAAAGCTT...ATCTTGTCCTTCTTTCCCCGCTTTTTGTGAACACAGAAATGTAACTGCTTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR TCA 90 bp | AATGACAAGGAAATGTGGAAATATACTAGGCTACATGGGTCTGTGAGACCTGGATTTCCCAGAAGCTTTTaGGCTCATGACAAGTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: NDKEMWKYTRLHGSVRPGFPRSF*AHDKFH Trigger: GTGGAACTTGTCATGAGCTCAAAAGCTTCTGGGAAA...TCCAGGTCTCACAGACCCATGTAGCCTAGTATATTTCCACATTTCCTTGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR TCA 90 bp | TTTTTCCAGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATTGCCCTCGGTAAGGACAAGATTTTATaGCTCTTTTTCCAGGACACC | + |
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Preference number: 4 (lower is better) Translates to: FFQDTWQSQIFIKVIALGKDKIL*LFFQDT Trigger: GGTGTCCTGGAAAAAGAGTCATAAAATCTTGTCCTT...ACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCTGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| 3UTR CAA 72 bp | AGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATaGCCCTCGGTAAGCTTAGAGAAAACACTTCAAATG | + |
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Preference number: 4 (lower is better) Translates to: RTPGKAKFSSRS*PSVSLEKTLQM Trigger: CATTTGAAGTGTTTTCTCTAAGCTTACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CCA 90 bp | AAGGTCATTGCCCTCGGTAAGCTTAGAGAAAACACTTCAAATGTCTCAAGACTTCCCCTATATAAGGAGTaGAGGAGTTACAGAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: KVIALGKLRENTSNVSRLPLYKE*RSYRNP Trigger: GGGATTTCTGTAACTCCTCCACTCCTTATATAGGGG...AAGTCTTGAGACATTTGAAGTGTTTTCTCTAAGCTTACCGAGGGCAATGACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR TCA 90 bp | AATGACAAGGAAATGTGGAAATATACTAGGCTACATGGGTCTGTGAGACCTGGAAAGGACAAGATTTTATaGCTCTTTTTCCAGGACACC | + |
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Preference number: 4 (lower is better) Translates to: NDKEMWKYTRLHGSVRPGKDKIL*LFFQDT Trigger: GGTGTCCTGGAAAAAGAGTCATAAAATCTTGTCCTT...TCCAGGTCTCACAGACCCATGTAGCCTAGTATATTTCCACATTTCCTTGTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CAA 90 bp | CTTTTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGCTCCCGGGCCTGCTCTaGATTCCTCAGGTCCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LLLNSPSVLSHLRSSCPLLPGLL*IPQVRL Trigger: GAGCCGGACCTGAGGAATCAAGAGCAGGCCCGGGAG...CAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS GCA 90 bp | GGGCCTGCTCTTGATTCCTCAGGTCCGGCTCAGGAAGGCCACAGATaGTGTCCTGAAATCACATTGTTGCAGCCCCTATATAAGGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: GPALDSSGPAQEGHR*CPEITLLQPLYKEW Trigger: CCACTCCTTATATAGGGGCTGCAACAATGTGATTTCAGGACAGCATCTGTGGCCTTCCTGAGCCGGACCTGAGGAATCAAGAGCAGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR CAA 90 bp | CCACTTGCGGTCATCCTGTCCTCTGTGCGGAGGGGATTGAGCAGGATAATAACTTCTGTGCGGAGGGGATaGAGCAGGATAATAACTCCC | + |
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Preference number: 5 (lower is better) Translates to: PLAVILSSVRRGLSRIITSVRRG*SRIITP Trigger: GGGAGTTATTATCCTGCTCAATCCCCTCCGCACAGA...AGTTATTATCCTGCTCAATCCCCTCCGCACAGAGGACAGGATGACCGCAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CAA 90 bp | TTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTGCGGTCGCTTGCTATCTTaGAAGTCGGTGAGGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LLNSPSVLSHLRSSCPLCGRLLS*KSVRQA Trigger: TGCCTGCCTCACCGACTTCAAAGATAGCAAGCGACC...GCACAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CAA 90 bp | TTATTAAATAGCCCAAGCGTCCTATCCCACTTGCGGTCATCCTGTCCTCTGTGCCAGGGCGCTTCTTTCTaGACGATCTTCCTCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LLNSPSVLSHLRSSCPLCQGASF*TIFLQF Trigger: GAACTGGAGGAAGATCGTCAAGAAAGAAGCGCCCTG...GCACAGAGGACAGGATGACCGCAAGTGGGATAGGACGCTTGGGCTATTTAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CAA 90 bp | TTTTTCCAGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATTGCCCTCGGTAGCGTCCTATCCCACTaGCGGTCATCCTGTCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FFQDTWQSQIFIKVIALGSVLSH*RSSCPL Trigger: CAGAGGACAGGATGACCGCAAGTGGGATAGGACGCT...ACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCTGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CAA 90 bp | AGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATTGCCCTCGGTAAGCTTATCCTTCTCAACAGGGTaGTCCAGCATCCTCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: RTPGKAKFSSRSLPSVSLSFSTG*SSILSL Trigger: GAGGCTGAGGATGCTGGACAACCCTGTTGAGAAGGA...TAAGCTTACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CAA 90 bp | AGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATTGCCCTCGGTAAGCTTAGGTCGCTTGCTATCTTaGAAGTCGGTGAGGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RTPGKAKFSSRSLPSVSLGRLLS*KSVRQA Trigger: TGCCTGCCTCACCGACTTCAAAGATAGCAAGCGACC...TAAGCTTACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CAA 90 bp | TTCCAGGACACCTGGCAAAGCCAAATTTTCATCAAGGTCATTGCCCTCGGTAAGTCTGTGCGGAGGGGATaGAGCAGGATAATAACTCCC | + |
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Preference number: 5 (lower is better) Translates to: FQDTWQSQIFIKVIALGKSVRRG*SRIITP Trigger: GGGAGTTATTATCCTGCTCAATCCCCTCCGCACAGA...CTTACCGAGGGCAATGACCTTGATGAAAATTTGGCTTTGCCAGGTGTCCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS TCA 90 bp | AACCAGACAATATCTTTCCAGGGACATTGTAGCCTTCCCTCGTGGTaGGAGATGGCTCTAAACAAATCCCATCTCGTACTACCCCACCCT | + |
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Preference number: 5 (lower is better) Translates to: NQTISFQGHCSLPSW*EMALNKSHLVLPHP Trigger: AGGGTGGGGTAGTACGAGATGGGATTTGTTTAGAGCCATCTCTCACCACGAGGGAAGGCTACAATGTCCCTGGAAAGATATTGTCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS TCA 90 bp | GCGAGCTTCTGTTTTGGCAGGTCCCACAAGTACTATGACTTGGCCTaGACCAAGAGAGATGATTTAGAGCAGAGGCTGGATTATCCATGT | + |
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Preference number: 5 (lower is better) Translates to: ASFCFGRSHKYYDLA*TKRDDLEQRLDYPC Trigger: ACATGGATAATCCAGCCTCTGCTCTAAATCATCTCTCTTGGTTCAGGCCAAGTCATAGTACTTGTGGGACCTGCCAAAACAGAAGCTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR CAA 90 bp | GTTTCACATGTAAATCCCCTAGCAAATGGAAGCACAAATAGAGAGCGTCCTGTTTCCTTCTCAACAGGGTaGTCCAGCATCCTCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: VSHVNPLANGSTNRERPVSFSTG*SSILSL Trigger: GAGGCTGAGGATGCTGGACAACCCTGTTGAGAAGGA...AACAGGACGCTCTCTATTTGTGCTTCCATTTGCTAGGGGATTTACATGTGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CAA 90 bp | CCATTAGCACTGGGGGAGGTTTCACATGTAAATCCCCTAGCAAATGGAAGCACATTTTCATCAAGGTCATaGCCCTCGGTAAGCTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: PLALGEVSHVNPLANGSTFSSRS*PSVSLE Trigger: CTCTAAGCTTACCGAGGGCAATGACCTTGATGAAAA...TGTGCTTCCATTTGCTAGGGGATTTACATGTGAAACCTCCCCCAGTGCTAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CAA 90 bp | CTGCAAGCAGTTACATTTCTGTGTTCACAAAAAGCGGGGAAAGAAGGACAAGATCCTGAAATCACATTGTaGCAGCCCCTATATAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LQAVTFLCSQKAGKEGQDPEITL*QPLYKE Trigger: CTCCTTATATAGGGGCTGCAACAATGTGATTTCAGG...ATCTTGTCCTTCTTTCCCCGCTTTTTGTGAACACAGAAATGTAACTGCTTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR CAA 90 bp | CTGCAAGCAGTTACATTTCTGTGTTCACAAAAAGCGGGGAAAGAAGGACAAGATTTTTCATCAAGGTCATaGCCCTCGGTAAGCTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: LQAVTFLCSQKAGKEGQDFSSRS*PSVSLE Trigger: CTCTAAGCTTACCGAGGGCAATGACCTTGATGAAAA...ATCTTGTCCTTCTTTCCCCGCTTTTTGTGAACACAGAAATGTAACTGCTTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000637493.1 ENST00000637691.1 |
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| CDS-3UTR CAA 90 bp | GTTTCACATGTAAATCCCCTAGCAAATGGAAGCACAAATAGAGAGCGTCCTGTTTGTCCTGAAATCACATaGTTGCAGCCCCTATATAAG | + |
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Preference number: 5 (lower is better) Translates to: VSHVNPLANGSTNRERPVCPEIT*LQPLYK Trigger: CTTATATAGGGGCTGCAACAATGTGATTTCAGGACA...AACAGGACGCTCTCTATTTGTGCTTCCATTTGCTAGGGGATTTACATGTGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS-3UTR CAA 90 bp | CTGCAAGCAGTTACATTTCTGTGTTCACAAAAAGCGGGGAAAGAAGGACAAGATACCTTTCAAGGTCATTaGAGCCAAATTAGTACCAGA | + |
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Preference number: 5 (lower is better) Translates to: LQAVTFLCSQKAGKEGQDTFQGH*SQISTR Trigger: TCTGGTACTAATTTGGCTCAAATGACCTTGAAAGGT...ATCTTGTCCTTCTTTCCCCGCTTTTTGTGAACACAGAAATGTAACTGCTTGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS CAA 90 bp | TACCCGGCTAGGGTGCAAAGGAGGGCAAGACTCCCGGGCCTGCTCTaGATTCCTCAGGTCCGGCTCAGGAAGGCCACAGATGCTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: YPARVQRRARLPGLL*IPQVRLRKATDAVL Trigger: CAGGACAGCATCTGTGGCCTTCCTGAGCCGGACCTGAGGAATCAAGAGCAGGCCCGGGAGTCTTGCCCTCCTTTGCACCCTAGCCGGGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS TCA 72 bp | GGGTGCAAAGGAGGGCAAGACTCCCGGGCCTGCTCTTaGTTCCTCAGGTCCGGCTCAGGAAGGCCACAGATG | + |
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Preference number: 6 (lower is better) Translates to: GCKGGQDSRACS*FLRSGSGRPQM Trigger: CATCTGTGGCCTTCCTGAGCCGGACCTGAGGAATCAAGAGCAGGCCCGGGAGTCTTGCCCTCCTTTGCACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS CAA 72 bp | AGGGTGCAAAGGAGGGCAAGACTCCCGGGCCTGCTCTaGATTCCTCAGGTCCGGCTCAGGAAGGCCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: RVQRRARLPGLL*IPQVRLRKATD Trigger: ATCTGTGGCCTTCCTGAGCCGGACCTGAGGAATCAAGAGCAGGCCCGGGAGTCTTGCCCTCCTTTGCACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS CAA 72 bp | CTACCCCACCCTCCCCAGAGAAGGCGAGCTTCTGTTTaGGCAGGTCCCACAAGTACTATGACTTGGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LPHPPQRRRASV*AGPTSTMTWPE Trigger: TTCAGGCCAAGTCATAGTACTTGTGGGACCTGCCAAAACAGAAGCTCGCCTTCTCTGGGGAGGGTGGGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS CAA 90 bp | CATCTCGTACTACCCCACCCTCCCCAGAGAAGGCGAGCTTCTGTTTaGGCAGGTCCCACAAGTACTATGACTTGGCCTGAACCAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: HLVLPHPPQRRRASV*AGPTSTMTWPEPRE Trigger: CTCTCTTGGTTCAGGCCAAGTCATAGTACTTGTGGGACCTGCCAAAACAGAAGCTCGCCTTCTCTGGGGAGGGTGGGGTAGTACGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS CAA 90 bp | TCAGGTCCGGCTCAGGAAGGCCACAGATGCTGTCCTGAAATCACATaGTTGCAGCCCCTATATAAGGAGTGGAGGAGTTACAGAAATCCC | + |
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Preference number: 6 (lower is better) Translates to: SGPAQEGHRCCPEIT*LQPLYKEWRSYRNP Trigger: GGGATTTCTGTAACTCCTCCACTCCTTATATAGGGGCTGCAACAATGTGATTTCAGGACAGCATCTGTGGCCTTCCTGAGCCGGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS CAA 72 bp | GCTCAGGAAGGCCACAGATGCTGTCCTGAAATCACATaGTTGCAGCCCCTATATAAGGAGTGGAGGAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: AQEGHRCCPEIT*LQPLYKEWRSY Trigger: GTAACTCCTCCACTCCTTATATAGGGGCTGCAACAATGTGATTTCAGGACAGCATCTGTGGCCTTCCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS TCA 72 bp | TGTTTTGGCAGGTCCCACAAGTACTATGACTTGGCCTaGACCAAGAGAGATGATTTAGAGCAGAGGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: CFGRSHKYYDLA*TKRDDLEQRLD Trigger: ATCCAGCCTCTGCTCTAAATCATCTCTCTTGGTTCAGGCCAAGTCATAGTACTTGTGGGACCTGCCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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| CDS TCA 72 bp | ATATCTTTCCAGGGACATTGTAGCCTTCCCTCGTGGTaGGAGATGGCTCTAAACAAATCCCATCTCGTACTA | + |
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Preference number: 6 (lower is better) Translates to: ISFQGHCSLPSW*EMALNKSHLVL Trigger: TAGTACGAGATGGGATTTGTTTAGAGCCATCTCTCACCACGAGGGAAGGCTACAATGTCCCTGGAAAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637493.1 |
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