RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM234B (Homo sapiens)

Ensembl gene IDs: ENSG00000084444

Ensembl transcript IDs: ENST00000197268.13, ENST00000416494.6, ENST00000535974.1, ENST00000537625.1, ENST00000540455.1, ENST00000541950.1

Found 376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAAGCTACTCACTTTCCAAAGCGGCCCACGTCACTGCAGATATGTaGCATTGTCAGCAGACAGGAGCATGCAAGATGCCCATCACGGTG +
Preference number: 1 (lower is better)
Translates to: PSYSLSKAAHVTADM*HCQQTGACKMPITV
Trigger: CACCGTGATGGGCATCTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGCTTTGGAAAGTGAGTAGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR TCA 90 bp TGTCTCCCTTTTCTCAGCTGTGAGCTTCGGAAGGGCAGGAACTGGTaGTATTTACCTGGGGATCTTCTGGGCCTAGCACAGTGCCAAGCT +
Preference number: 1 (lower is better)
Translates to: CLPFLSCELRKGRNW*YLPGDLLGLAQCQA
Trigger: AGCTTGGCACTGTGCTAGGCCCAGAAGATCCCCAGGTAAATATCACCAGTTCCTGCCCTTCCGAAGCTCACAGCTGAGAAAAGGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR TCA 90 bp GTACCTCTACCACAGCCTTTGCAAACTGTCATCCAACCCCATCTCTaGAGACACCTAACCCAAGCTACTCACTTTCCAAAGCGGCCCACG +
Preference number: 1 (lower is better)
Translates to: VPLPQPLQTVIQPHL*RHLTQATHFPKRPT
Trigger: CGTGGGCCGCTTTGGAAAGTGAGTAGCTTGGGTTAGGTGTCTTCAGAGATGGGGTTGGATGACAGTTTGCAAAGGCTGTGGTAGAGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR GCA 90 bp GCAGGGACTGAAAAGGTAGGTAAGATGCCCCAGCCAAATAGATCATaGTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAAC +
Preference number: 1 (lower is better)
Translates to: AGTEKVGKMPQPNRS*CRQRLQHAFPSLCN
Trigger: GTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTGGGGCATCTTACCTACCTTTTCAGTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR TCA 90 bp AAACTGTCAGGTATTAAGGGCCCATTCCATTCTCAGCCCTGCTCCTaGGAAGTCAATCTTTCGAACCCCTCAGTTCTCCAGAGATCAGCC +
Preference number: 1 (lower is better)
Translates to: KLSGIKGPFHSQPCS*EVNLSNPSVLQRSA
Trigger: GGCTGATCTCTGGAGAACTGAGGGGTTCGAAAGATTGACTTCTCAGGAGCAGGGCTGAGAATGGAATGGGCCCTTAATACCTGACAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR GCA 90 bp GGGACTGAAAAGGTAGGTAAGATGCCCCAGCCAAATAGATCATGCTaGCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCAT +
Preference number: 1 (lower is better)
Translates to: GTEKVGKMPQPNRSC*RQRLQHAFPSLCNH
Trigger: ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTGGGGCATCTTACCTACCTTTTCAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR GCA 90 bp AGAAAGAAAGGAGCATGTCCTATCTTAGACACCTGGGTGGGTGGCTaGCTGCAAGGAGAAGGAGGCTTAGGGACACATTTCACAAGAAAC +
Preference number: 1 (lower is better)
Translates to: RKKGACPILDTWVGG*LQGEGGLGTHFTRN
Trigger: GTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTCTCCTTGCAGGCAGCCACCCACCCAGGTGTCTAAGATAGGACATGCTCCTTTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR CCA 90 bp TTAGAGAAAGAAAGGAGCATGTCCTATCTTAGACACCTGGGTGGGTaGCTGCCTGCAAGGAGAAGGAGGCTTAGGGACACATTTCACAAG +
Preference number: 1 (lower is better)
Translates to: LEKERSMSYLRHLGG*LPARRRRLRDTFHK
Trigger: CTTGTGAAATGTGTCCCTAAGCCTCCTTCTCCTTGCAGGCAGCCACCCACCCAGGTGTCTAAGATAGGACATGCTCCTTTCTTTCTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR CCA 90 bp ACCATCAGAGCCACATATAACACAACATGTGGACTTGGTCAGAGATaGGTCACTGAGACTACATCCTCTTGCTCCCCTTGTGATAGGAAT +
Preference number: 1 (lower is better)
Translates to: TIRATYNTTCGLGQR*VTETTSSCSPCDRN
Trigger: ATTCCTATCACAAGGGGAGCAAGAGGATGTAGTCTCAGTGACCCATCTCTGACCAAGTCCACATGTTGTGTTATATGTGGCTCTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR TCA 90 bp CTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATaGAGCTTCCTCAATTTTCAGCCACCACTTACACCTTTCTGTACC +
Preference number: 1 (lower is better)
Translates to: LRDTFHKKPAPTLVR*SFLNFQPPLTPFCT
Trigger: GGTACAGAAAGGTGTAAGTGGTGGCTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR TCA 90 bp GAAGTCAATCTTTCGAACCCCTCAGTTCTCCAGAGATCAGCCTTCTaGAATCCTCAGAATGGCTATGAACCTGGCAGTAATAATGCAGTG +
Preference number: 1 (lower is better)
Translates to: EVNLSNPSVLQRSAF*NPQNGYEPGSNNAV
Trigger: CACTGCATTATTACTGCCAGGTTCATAGCCATTCTGAGGATTTCAGAAGGCTGATCTCTGGAGAACTGAGGGGTTCGAAAGATTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR CCA 90 bp AAATGTTTGTTGGAAGAAAAGTTGAATGATTCCAGTGTTTCCCACTaGCTGTACCATAGTCAGAATCTGAAGGAAGCTGTTTCACCCAGC +
Preference number: 1 (lower is better)
Translates to: KCLLEEKLNDSSVSH*LYHSQNLKEAVSPS
Trigger: GCTGGGTGAAACAGCTTCCTTCAGATTCTGACTATGGTACAGCCAGTGGGAAACACTGGAATCATTCAACTTTTCTTCCAACAAACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR CCA 90 bp GGATCTACTGCTACCAACCTCCTGTTAGGTCATAATGCCTGTCAGTaGGTAATTAACAGAGATCCCTTTGAATCTGGACTTCATAATTTT +
Preference number: 1 (lower is better)
Translates to: GSTATNLLLGHNACQ*VINRDPFESGLHNF
Trigger: AAAATTATGAAGTCCAGATTCAAAGGGATCTCTGTTAATTACCCACTGACAGGCATTATGACCTAACAGGAGGTTGGTAGCAGTAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR CAA 90 bp CTACTCACTTTCCAAAGCGGCCCACGTCACTGCAGATATGTGCCATaGTCAGCAGACAGGAGCATGCAAGATGCCCATCACGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: LLTFQSGPRHCRYVP*SADRSMQDAHHGAM
Trigger: CATGGCACCGTGATGGGCATCTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGCTTTGGAAAGTGAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR GCA 90 bp GAGTCTGAACACGACGTGACTCCTCTGCACAGCATCCGGGGATGGCTTTTTGGACAGGAGCATGCAAGATaGCCATCACGGTGCCATGAT +
Preference number: 2 (lower is better)
Translates to: ESEHDVTPLHSIRGWLFGQEHAR*PSRCHD
Trigger: ATCATGGCACCGTGATGGGCATCTTGCATGCTCCTG...TCCAAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTCGTGTTCAGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR TCA 90 bp TTCCAAAGCGGCCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCCACAAGAAGCTTAAGTaGCTTCTGCTGCTGCTGCCA +
Preference number: 2 (lower is better)
Translates to: FQSGPRHCRYVPLSADRSHKKLK*LLLLLP
Trigger: TGGCAGCAGCAGCAGAAGTCACTTAAGCTTCTTGTG...GCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR GCA 90 bp ACTGAGTCTGAACACGACGTGACTCCTCTGCACAGCATCCGGGGATGGCTTTTTAGATGCCCATCACGGTaGCATGATCACAAGAAGCTT +
Preference number: 2 (lower is better)
Translates to: TESEHDVTPLHSIRGWLFRCPSR*HDHKKL
Trigger: AAGCTTCTTGTGATCATGGCACCGTGATGGGCATCT...AAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTCGTGTTCAGACTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR TCA 90 bp GGTCATATTGGCTTTGCCGGCAACCTCAGGATGGGATTAGAGAAAGAAAGGAGCCAGGGAGGTGGTAAATaGGGACGAAGAAGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: GHIGFAGNLRMGLEKERSQGGGK*GRRSLL
Trigger: GAGAAGACTTCTTCGTCCTCATTTACCACCTCCCTG...GCTCCTTTCTTTCTCTAATCCCATCCTGAGGTTGCCGGCAAAGCCAATATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR-3UTR CCA 90 bp TTATGCCCGGACAGCTCAGCCAAACCACAGGACCACCACCCAAGTTTTGGGTATAGTCATAGACTTCACTaGCTTTCCCAGCAAGACTTC +
Preference number: 2 (lower is better)
Translates to: LCPDSSAKPQDHHPSFGYSHRLH*LSQQDF
Trigger: GAAGTCTTGCTGGGAAAGCCAGTGAAGTCTATGACT...ATACCCAAAACTTGGGTGGTGGTCCTGTGGTTTGGCTGAGCTGTCCGGGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR-3UTR CCA 90 bp ACCTGGGGATCTTCTGGGCCTAGCACAGTGCCAAGCTCGCAATTAGTGTTCAAGTCCAGTGTTTCCCACTaGCTGTACCATAGTCAGAAT +
Preference number: 2 (lower is better)
Translates to: TWGSSGPSTVPSSQLVFKSSVSH*LYHSQN
Trigger: ATTCTGACTATGGTACAGCCAGTGGGAAACACTGGA...CTTGAACACTAATTGCGAGCTTGGCACTGTGCTAGGCCCAGAAGATCCCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR TCA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTCAGGGAGGTGGTAAATaGGGACGAAGAAGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTQGGGK*GRRSLL
Trigger: GAGAAGACTTCTTCGTCCTCATTTACCACCTCCCTG...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR-3UTR TCA 90 bp AAGACACCTAACCCAAGCTACTCACTTTCCAAAGCGGCCCACGTCACTGCAGATCAGAGATCAGCCTTCTaGAATCCTCAGAATGGCTAT +
Preference number: 2 (lower is better)
Translates to: KTPNPSYSLSKAAHVTADQRSAF*NPQNGY
Trigger: ATAGCCATTCTGAGGATTTCAGAAGGCTGATCTCTG...ATCTGCAGTGACGTGGGCCGCTTTGGAAAGTGAGTAGCTTGGGTTAGGTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR GCA 90 bp GAGATTTCCTGGAAGTGCTACACGTTACTTCTGCTTACAGCACATCGGCCAGAAGGAGTGATGAGGTCCTaGAAGTGGCAGTCAAGAATG +
Preference number: 2 (lower is better)
Translates to: EISWKCYTLLLLTAHRPEGVMRS*KWQSRM
Trigger: CATTCTTGACTGCCACTTGCAGGACCTCATCACTCC...TTCTGGCCGATGTGCTGTAAGCAGAAGTAACGTGTAGCACTTCCAGGAAATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR TCA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTGAACTGATTTTACAGTaGCAGGAGAGTAGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTELILQ*QESREG
Trigger: ACCCTCTCTACTCTCCTGTCACTGTAAAATCAGTTC...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR-3UTR TCA 90 bp AAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAACTGATTTTACAGTaGCAGGAGAGTAGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: KDSNMPSQAFATIREVVNELILQ*QESREG
Trigger: ACCCTCTCTACTCTCCTGTCACTGTAAAATCAGTTC...ATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR-3UTR GCA 90 bp GTGGCCCTCAACATCAGAGGTAGGGCATCTGGAAGTCTCAAAATGACCAAACAACAGCCAAATAGATCATaGTGCCGTCAAAGACTCCAA +
Preference number: 2 (lower is better)
Translates to: VALNIRGRASGSLKMTKQQPNRS*CRQRLQ
Trigger: TTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG...TTGTTTGGTCATTTTGAGACTTCCAGATGCCCTACCTCTGATGTTGAGGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR-3UTR CCA 90 bp AAGTCAATCTTTCGAACCCCTCAGTTCTCCAGAGATCAGCCTTCTGAAATCCTCATGAGGTCCTGCAAGTaGCAGTCAAGAATGGCTAAG +
Preference number: 2 (lower is better)
Translates to: KSIFRTPQFSRDQPSEILMRSCK*QSRMAK
Trigger: CTTAGCCATTCTTGACTGCCACTTGCAGGACCTCAT...GAGGATTTCAGAAGGCTGATCTCTGGAGAACTGAGGGGTTCGAAAGATTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR CAA 90 bp GGGCCTAGCACAGTGCCAAGCTCGCAATTAGTGTTCAAGAAATGTTaGTTGGAAGAAAAGTTGAATGATTCCAGTGTTTCCCACTGGCTG +
Preference number: 2 (lower is better)
Translates to: GPSTVPSSQLVFKKC*LEEKLNDSSVSHWL
Trigger: CAGCCAGTGGGAAACACTGGAATCATTCAACTTTTCTTCCAACAAACATTTCTTGAACACTAATTGCGAGCTTGGCACTGTGCTAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR CCA 90 bp AGGAGCATGCAAGATGCCCATCACGGTGCCATGATCACAAGAAGCTTAAGTGACTATAAAGAGATTTCCTaGAAGTGCTACACGTTACTT +
Preference number: 2 (lower is better)
Translates to: RSMQDAHHGAMITRSLSDYKEIS*KCYTLL
Trigger: AAGTAACGTGTAGCACTTCCAGGAAATCTCTTTATA...GTCACTTAAGCTTCTTGTGATCATGGCACCGTGATGGGCATCTTGCATGCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR CAA 90 bp GTAATGGAATCAGAAGCCTTATGTTCTGAATTAATTACACTGGCTTaGTGTCATCAGGGCTTGGGAAACTGTCAGGTATTAAGGGCCCAT +
Preference number: 2 (lower is better)
Translates to: VMESEALCSELITLA*CHQGLGNCQVLRAH
Trigger: ATGGGCCCTTAATACCTGACAGTTTCCCAAGCCCTGATGACACAAAGCCAGTGTAATTAATTCAGAACATAAGGCTTCTGATTCCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR GCA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATTCAAAGACTCCAACATaGCTTCCCAAGCCTTTGCAA +
Preference number: 2 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINSKTPT*LPKPLQ
Trigger: TTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGA...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR-3UTR GCA 90 bp ATCAAGGTTATTCAAGAAGCAGTTTTCCATCCGCTAACATTGAATTTTCTGCTAGCAGGACAAAATGGTTaGATCCTGGACTCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: IKVIQEAVFHPLTLNFLLAGQNG*ILDSSS
Trigger: GCTACTTGAGTCCAGGATGCAACCATTTTGTCCTGC...TAGCAGAAAATTCAATGTTAGCGGATGGAAAACTGCTTCTTGAATAACCTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR-3UTR GCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCCCAAATAGATCATGCTaGCGTCAAAGACTCCAACAT +
Preference number: 2 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFPNRSC*RQRLQH
Trigger: ATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGG...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR-3UTR CCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTATGAAAATGCTTGGATaGCTAACTCAGTCTTCCACT +
Preference number: 2 (lower is better)
Translates to: DPCICRSHYYFSVVVILAMKMLG*LTQSST
Trigger: AGTGGAAGACTGAGTTAGCCATCCAAGCATTTTCAT...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR-3UTR CCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCAGCTTAGGACATACCTaGAAAATAACTTCACCACAA +
Preference number: 2 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFSLGHT*KITSPQ
Trigger: TTGTGGTGAAGTTATTTTCCAGGTATGTCCTAAGCT...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR GCA 72 bp TCACTTTCCAAAGCGGCCCACGTCACTGCAGATATGTaGCATTGTCAGCAGACAGGAGCATGCAAGATGCCC +
Preference number: 3 (lower is better)
Translates to: SLSKAAHVTADM*HCQQTGACKMP
Trigger: GGGCATCTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGCTTTGGAAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR GCA 72 bp CCCAAGCTACTCACTTTCCAAAGCGGCCCACGTCACTaGAGATATGTGCCATTGTCAGCAGACAGGAGCATG +
Preference number: 3 (lower is better)
Translates to: PKLLTFQSGPRH*RYVPLSADRSM
Trigger: CATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGCTTTGGAAAGTGAGTAGCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR TCA 72 bp TTTCTCAGCTGTGAGCTTCGGAAGGGCAGGAACTGGTaGTATTTACCTGGGGATCTTCTGGGCCTAGCACAG +
Preference number: 3 (lower is better)
Translates to: FLSCELRKGRNW*YLPGDLLGLAQ
Trigger: CTGTGCTAGGCCCAGAAGATCCCCAGGTAAATATCACCAGTTCCTGCCCTTCCGAAGCTCACAGCTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR TCA 72 bp TTCTGTGCTGACTTTGGACTGAGTCTGAACACGACGTaGCTCCTCTGCACAGCATCCGGGGATGGCTTTTTG +
Preference number: 3 (lower is better)
Translates to: FCADFGLSLNTT*LLCTASGDGFL
Trigger: CAAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTCGTGTTCAGACTCAGTCCAAAGTCAGCACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR CAA 90 bp ACTGAGTCTGAACACGACGTGACTCCTCTGCACAGCATCCGGGGATGGCTTTTTTGCAGATATGTGCCATaGTCAGCAGACAGGAGCATG +
Preference number: 3 (lower is better)
Translates to: TESEHDVTPLHSIRGWLFCRYVP*SADRSM
Trigger: CATGCTCCTGTCTGCTGACAATGGCACATATCTGCA...AAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTCGTGTTCAGACTCAGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR TCA 72 bp CCAGTGTTTCCCACTGGCTGTACCATAGTCAGAATCTaGAGGAAGCTGTTTCACCCAGCGTACCTCTACCAC +
Preference number: 3 (lower is better)
Translates to: PVFPTGCTIVRI*RKLFHPAYLYH
Trigger: GTGGTAGAGGTACGCTGGGTGAAACAGCTTCCTTCAGATTCTGACTATGGTACAGCCAGTGGGAAACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR GCA 72 bp AAGCTGTTTCACCCAGCGTACCTCTACCACAGCCTTTaGAAACTGTCATCCAACCCCATCTCTGAAGACACC +
Preference number: 3 (lower is better)
Translates to: KLFHPAYLYHSL*KLSSNPISEDT
Trigger: GGTGTCTTCAGAGATGGGGTTGGATGACAGTTTGCAAAGGCTGTGGTAGAGGTACGCTGGGTGAAACAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR-3UTR CAA 90 bp TTCCCAGAAAGCCTTAACATAACAGAGAACCAGGTTATGCCCGGACAGCTCAGCACACAACATGTGGACTaGGTCAGAGATGGGTCACTG +
Preference number: 3 (lower is better)
Translates to: FPESLNITENQVMPGQLSTQHVD*VRDGSL
Trigger: CAGTGACCCATCTCTGACCAAGTCCACATGTTGTGT...GCTGAGCTGTCCGGGCATAACCTGGTTCTCTGTTATGTTAAGGCTTTCTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR TCA 72 bp GGATGGCTTTTTGGAGTGTCTCCCTTTTCTCAGCTGTaGGCTTCGGAAGGGCAGGAACTGGTGATATTTACC +
Preference number: 3 (lower is better)
Translates to: GWLFGVSPFSQL*ASEGQELVIFT
Trigger: GGTAAATATCACCAGTTCCTGCCCTTCCGAAGCTCACAGCTGAGAAAAGGGAGACACTCCAAAAAGCCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR GCA 72 bp AAGGTAGGTAAGATGCCCCAGCCAAATAGATCATGCTaGCGTCAAAGACTCCAACATGCCTTCCCAAGCCTT +
Preference number: 3 (lower is better)
Translates to: KVGKMPQPNRSC*RQRLQHAFPSL
Trigger: AAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTGGGGCATCTTACCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR GCA 72 bp GAAAAGGTAGGTAAGATGCCCCAGCCAAATAGATCATaGTGCCGTCAAAGACTCCAACATGCCTTCCCAAGC +
Preference number: 3 (lower is better)
Translates to: EKVGKMPQPNRS*CRQRLQHAFPS
Trigger: GCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTGGGGCATCTTACCTACCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR GCA 72 bp TCACCCATAACAGGAGACCAAGGAGTGATGAGGTCCTaGAAGTGGCAGTCAAGAATGGCTAAGAAATTCGGC +
Preference number: 3 (lower is better)
Translates to: SPITGDQGVMRS*KWQSRMAKKFG
Trigger: GCCGAATTTCTTAGCCATTCTTGACTGCCACTTGCAGGACCTCATCACTCCTTGGTCTCCTGTTATGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR TCA 72 bp CCACAGCCTTTGCAAACTGTCATCCAACCCCATCTCTaGAGACACCTAACCCAAGCTACTCACTTTCCAAAG +
Preference number: 3 (lower is better)
Translates to: PQPLQTVIQPHL*RHLTQATHFPK
Trigger: CTTTGGAAAGTGAGTAGCTTGGGTTAGGTGTCTTCAGAGATGGGGTTGGATGACAGTTTGCAAAGGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR GCA 72 bp ATATGTGCCATTGTCAGCAGACAGGAGCATGCAAGATaGCCATCACGGTGCCATGATCACAAGAAGCTTAAG +
Preference number: 3 (lower is better)
Translates to: ICAIVSRQEHAR*PSRCHDHKKLK
Trigger: CTTAAGCTTCTTGTGATCATGGCACCGTGATGGGCATCTTGCATGCTCCTGTCTGCTGACAATGGCACATAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR CCA 72 bp GCCACATATAACACAACATGTGGACTTGGTCAGAGATaGGTCACTGAGACTACATCCTCTTGCTCCCCTTGT +
Preference number: 3 (lower is better)
Translates to: ATYNTTCGLGQR*VTETTSSCSPC
Trigger: ACAAGGGGAGCAAGAGGATGTAGTCTCAGTGACCCATCTCTGACCAAGTCCACATGTTGTGTTATATGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR-3UTR CAA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATTGCCTTCCCAAGCCTTaGCAACCATCAGGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINCLPKP*QPSGRW
Trigger: CCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCA...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR-3UTR CAA 90 bp TCTGAAGGAAGCTGTTTCACCCAGCGTACCTCTACCACAGCCTTTGCAAACTGTTTAATTACACTGGCTTaGTGTCATCAGGGCTTGGGA +
Preference number: 3 (lower is better)
Translates to: SEGSCFTQRTSTTAFANCLITLA*CHQGLG
Trigger: TCCCAAGCCCTGATGACACAAAGCCAGTGTAATTAA...ACAGTTTGCAAAGGCTGTGGTAGAGGTACGCTGGGTGAAACAGCTTCCTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR TCA 72 bp CTTTCGAACCCCTCAGTTCTCCAGAGATCAGCCTTCTaGAATCCTCAGAATGGCTATGAACCTGGCAGTAAT +
Preference number: 3 (lower is better)
Translates to: LSNPSVLQRSAF*NPQNGYEPGSN
Trigger: ATTACTGCCAGGTTCATAGCCATTCTGAGGATTTCAGAAGGCTGATCTCTGGAGAACTGAGGGGTTCGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR TCA 72 bp TTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATaGGGACGAAGAAGTCTTCTCTCCATAGAACTGATT +
Preference number: 3 (lower is better)
Translates to: FPSLCNHQGGGK*GRRSLLSIELI
Trigger: AATCAGTTCTATGGAGAGAAGACTTCTTCGTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR TCA 72 bp CGAAGAAGTCTTCTCTCCATAGAACTGATTTTACAGTaGCAGGAGAGTAGAGAGGGTATCCACTCTGTTCAC +
Preference number: 3 (lower is better)
Translates to: RRSLLSIELILQ*QESREGIHSVH
Trigger: GTGAACAGAGTGGATACCCTCTCTACTCTCCTGTCACTGTAAAATCAGTTCTATGGAGAGAAGACTTCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR TCA 72 bp ACATTTCACAAGAAACCAGCACCCACATTGGTCAGATaGAGCTTCCTCAATTTTCAGCCACCACTTACACCT +
Preference number: 3 (lower is better)
Translates to: TFHKKPAPTLVR*SFLNFQPPLTP
Trigger: AGGTGTAAGTGGTGGCTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
3UTR GCA 72 bp GCTCTACAGGAAAGAAGAGATGCAGGACAAAATGGTTaGATCCTGGACTCAAGTAGCAGAAGAAAAAGTCCA +
Preference number: 3 (lower is better)
Translates to: ALQERRDAGQNG*ILDSSSRRKSP
Trigger: TGGACTTTTTCTTCTGCTACTTGAGTCCAGGATGCAACCATTTTGTCCTGCATCTCTTCTTTCCTGTAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR CCA 72 bp GGTACATTAAGTTTCTCTAGCTTCCTCTTATCTTTCTaGGATTTGCCCTGCATAAACACAGTCCTCTGCCCA +
Preference number: 3 (lower is better)
Translates to: GTLSFSSFLLSF*DLPCINTVLCP
Trigger: TGGGCAGAGGACTGTGTTTATGCAGGGCAAATCCCAGAAAGATAAGAGGAAGCTAGAGAAACTTAATGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR TCA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGTCTTCCCCGGCAGCTTaGGCGCCCTGGACAGCACGG +
Preference number: 4 (lower is better)
Translates to: DSNMPSQAFATIREVVNESSPAA*APWTAR
Trigger: CCGTGCTGTCCAGGGCGCTCAAGCTGCCGGGGAAGA...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp CAGCCAAATAGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTACAGCACGGTCGCCATaGCTGAGGCCCCGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: QPNRSCCRQRLQHAFPSLTARSP*LRPRCA
Trigger: CGCGCACCGGGGCCTCAGCCATGGCGACCGTGCTGT...AAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGCCCTGGGAGCCCAAGTaGCGGCTCCAGGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DSNMPSQAFATIREVVNEPWEPK*RLQVLC
Trigger: GCACAGCACCTGGAGCCGCCACTTGGGCTCCCAGGG...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp AACAGAGAACCAGGTTATGCCCGGACAGCTCAGCCAAACCACAGGACCACCACCCTGAAGCCGTCACTGTaGCGGTGGTGTTGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: NREPGYARTAQPNHRTTTLKPSL*RWCWPD
Trigger: ATCTGGCCAACACCACCGGCACAGTGACGGCTTCAG...GGTGGTGGTCCTGTGGTTTGGCTGAGCTGTCCGGGCATAACCTGGTTCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp AACAGAGAACCAGGTTATGCCCGGACAGCTCAGCCAAACCACAGGACCACCACCCCAGGAGGCGAAGGTTaGAGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: NREPGYARTAQPNHRTTTPGGEG*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAACCTTCGCCTCCTGG...GGTGGTGGTCCTGTGGTTTGGCTGAGCTGTCCGGGCATAACCTGGTTCTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp GGTCATATTGGCTTTGCCGGCAACCTCAGGATGGGATTAGAGAAAGAAAGGAGCAGGTCCCCACCTCCCTaGGAGCCCAAGTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GHIGFAGNLRMGLEKERSRSPPP*EPKWRL
Trigger: GAGCCGCCACTTGGGCTCCCAGGGAGGTGGGGACCT...GCTCCTTTCTTTCTCTAATCCCATCCTGAGGTTGCCGGCAAAGCCAATATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGAAGAAGTCTTCAGGTCCCCACCTCCCTaGGAGCCCAAGTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SQAFATIREVVNEDEEVFRSPPP*EPKWRL
Trigger: GAGCCGCCACTTGGGCTCCCAGGGAGGTGGGGACCT...GAAGACTTCTTCGTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GCGGCCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCATGCAAGCCGTCACTGTGCCGGTaGTGTTGGCCAGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: AAHVTADMCHCQQTGACKPSLCR*CWPDPE
Trigger: TTCTGGATCTGGCCAACACCACCGGCACAGTGACGG...CTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp GAGTCTGAACACGACGTGACTCCTCTGCACAGCATCCGGGGATGGCTTTTTGGAATTGGGAGATGCAGCTaGCAGCCCTTCGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: ESEHDVTPLHSIRGWLFGIGRCS*QPFGPE
Trigger: TTCTGGGCCGAAGGGCTGTCAGCTGCATCTCCCAAT...TCCAAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTCGTGTTCAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATCCCTGGGAGCCCAAGTaGCGGCTCCAGGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDPWEPK*RLQVLC
Trigger: GCACAGCACCTGGAGCCGCCACTTGGGCTCCCAGGG...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp ACCTGGGGATCTTCTGGGCCTAGCACAGTGCCAAGCTCGCAATTAGTGTTCAAGCACAGGTCGACCCACTaGATTTCCGGTCCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TWGSSGPSTVPSSQLVFKHRSTH*ISGPAR
Trigger: TCTGGCCGGACCGGAAATCCAGTGGGTCGACCTGTG...CTTGAACACTAATTGCGAGCTTGGCACTGTGCTAGGCCCAGAAGATCCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATAGACGTGCGCACATATaGCACCAGGGAGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHRRAHI*HQGGGR
Trigger: GCGGCCTCCTCCCTGGTGTCATATGTGCGCACGTCT...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp TCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGAAGAAGTCTTCAGACGTGCGCACATATaGCACCAGGGAGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SQAFATIREVVNEDEEVFRRAHI*HQGGGR
Trigger: GCGGCCTCCTCCCTGGTGTCATATGTGCGCACGTCT...GAAGACTTCTTCGTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp CAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAAACCTGGGTGGGTGGCTaGCTGCAAGGAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QRLQHAFPSLCNHQGGGKTWVGG*LQGEGG
Trigger: GCCTCCTTCTCCTTGCAGGCAGCCACCCACCCAGGT...TTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp AACAGAGAACCAGGTTATGCCCGGACAGCTCAGCCAAACCACAGGACCACCACCGCTGCAATTCCCCAATaGCCAGAACCACAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: NREPGYARTAQPNHRTTTAAIPQ*PEPQGL
Trigger: GAGACCTTGTGGTTCTGGCCATTGGGGAATTGCAGC...GGTGGTGGTCCTGTGGTTTGGCTGAGCTGTCCGGGCATAACCTGGTTCTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp TCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGAAGAAGTCTTCACCAGGGCTGCTGGATaGCCTTCGGAGCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SQAFATIREVVNEDEEVFTRAAG*PSELGP
Trigger: AGGGCCAAGCTCCGAAGGCCATCCAGCAGCCCTGGT...GAAGACTTCTTCGTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGCACTCCTGCGCAGAGTaGCTGGCTTCCCAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: DSNMPSQAFATIREVVNEHSCAE*LASQKA
Trigger: GGCTTTCTGGGAAGCCAGCCACTCTGCGCAGGAGTG...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR TCA 90 bp CCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCATGCAAGATGCAGTCTGAACACGACGTaGCTCCTCTGCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: PTSLQICAIVSRQEHARCSLNTT*LLCTAS
Trigger: GGATGCTGTGCAGAGGAGTCACGTCGTGTTCAGACT...GCATCTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp GATGCCCATCACGGTGCCATGATCACAAGAAGCTTAAGTGACTTCTGCTGCTGCCTGAAGCCGTCACTGTaGCGGTGGTGTTGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: DAHHGAMITRSLSDFCCCLKPSL*RWCWPD
Trigger: ATCTGGCCAACACCACCGGCACAGTGACGGCTTCAG...GCAGCAGCAGAAGTCACTTAAGCTTCTTGTGATCATGGCACCGTGATGGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp CAGCCAAATAGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTCACAGGTCGACCCACTaGATTTCCGGTCCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: QPNRSCCRQRLQHAFPSLHRSTH*ISGPAR
Trigger: TCTGGCCGGACCGGAAATCCAGTGGGTCGACCTGTG...AAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GCGGCCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCATGCAAGGAAGGTTGCTGCAGTTaGAATCTGGTGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: AAHVTADMCHCQQTGACKEGCCS*NLVPSP
Trigger: TGGTGAAGGCACCAGATTCCAACTGCAGCAACCTTC...CTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp GCCCTGCTCCTGAGAAGTCAATCTTTCGAACCCCTCAGTTCTCCAGAGATCAGCAAAGGTGGTGAAGGCTaGGCGGCTCAGTTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: ALLLRSQSFEPLSSPEISKGGEG*AAQFLG
Trigger: TCCTAGGAACTGAGCCGCCCAGCCTTCACCACCTTT...GCTGATCTCTGGAGAACTGAGGGGTTCGAAAGATTGACTTCTCAGGAGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp GCCCTGCTCCTGAGAAGTCAATCTTTCGAACCCCTCAGTTCTCCAGAGATCAGCCCAGATCCAGAAGGATaGAGGGGAACGCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: ALLLRSQSFEPLSSPEISPDPEG*RGTQDA
Trigger: TGCATCCTGCGTTCCCCTCCATCCTTCTGGATCTGG...GCTGATCTCTGGAGAACTGAGGGGTTCGAAAGATTGACTTCTCAGGAGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp CAGCCAAATAGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTAGACACCTGGGTGGGTaGCTGCCTGCAAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QPNRSCCRQRLQHAFPSLRHLGG*LPARRR
Trigger: CCTTCTCCTTGCAGGCAGCCACCCACCCAGGTGTCT...AAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp ACCTGGGGATCTTCTGGGCCTAGCACAGTGCCAAGCTCGCAATTAGTGTTCAAGCACAGCATCCGGGGATaGCTTTTTGGAGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TWGSSGPSTVPSSQLVFKHSIRG*LFGVSP
Trigger: GGGAGACACTCCAAAAAGCCATCCCCGGATGCTGTG...CTTGAACACTAATTGCGAGCTTGGCACTGTGCTAGGCCCAGAAGATCCCCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537625.1
3UTR CAA 72 bp TTCCAAAGCGGCCCACGTCACTGCAGATATGTGCCATaGTCAGCAGACAGGAGCATGCAAGATGCCCATCAC +
Preference number: 4 (lower is better)
Translates to: FQSGPRHCRYVP*SADRSMQDAHH
Trigger: GTGATGGGCATCTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGCTTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATTGCAACCTCAGCATCTaGGTCGGGTTCTGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHCNLSI*VGFWRF
Trigger: GAAGCGCCAGAACCCGACTCAGATGCTGAGGTTGCA...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp CAGCCAAATAGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTATTGGGAGATGCAGCTaGCAGCCCTTCGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: QPNRSCCRQRLQHAFPSLIGRCS*QPFGPE
Trigger: TTCTGGGCCGAAGGGCTGTCAGCTGCATCTCCCAAT...AAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp ACCCCTCAGTTCTCCAGAGATCAGCCTTCTGAAATCCTCAGAATGGCTATGAACCGGCCTTTAACCCTCTaGAGCCGTCACTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: TPQFSRDQPSEILRMAMNRPLTL*SRHCAG
Trigger: ACCGGCACAGTGACGGCTTCAGAGGGTTAAAGGCCG...GTTCATAGCCATTCTGAGGATTTCAGAAGGCTGATCTCTGGAGAACTGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp TCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGCAGGAAGACAGACGTaGGCACATATGACACCAGGG +
Preference number: 4 (lower is better)
Translates to: SNMPSQAFATIREVVNEDAGRQT*AHMTPG
Trigger: CCCTGGTGTCATATGTGCGCACGTCTGTCTTCCTGC...GTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp GACGTGACTCCTCTGCACAGCATCCGGGGATGGCTTTTTGGAGTGTCTCCCTTTTCTGGCTCTTCTATCTaGAGAGAAGGTGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: DVTPLHSIRGWLFGVSPFSGSSI*REGGEL
Trigger: CAGCTCACCACCTTCTCTGCAGATAGAAGAGCCAGA...AAAGGGAGACACTCCAAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp CCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCATGCAAGATGCAGCGGCCCACGTCACTaGAGATATGTGCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: PTSLQICAIVSRQEHARCSGPRH*RYVPLS
Trigger: TGACAATGGCACATATCTGCAGTGACGTGGGCCGCT...GCATCTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp ACTGAGTCTGAACACGACGTGACTCCTCTGCACAGCATCCGGGGATGGCTTTTTGCTGCAGTTGGAATCTaGTGCCTTCACCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: TESEHDVTPLHSIRGWLFAAVGI*CLHHLE
Trigger: CTCCAGATGGTGAAGGCACCAGATTCCAACTGCAGC...AAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTCGTGTTCAGACTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGAAAGGTGGTGAAGGCTaGGCGGCTCAGTTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: DSNMPSQAFATIREVVNEKGGEG*AAQFLG
Trigger: TCCTAGGAACTGAGCCGCCCAGCCTTCACCACCTTT...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCCGTCACTGTGCCGGTaGTGTTGGCCAGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHPSLCR*CWPDPE
Trigger: TTCTGGATCTGGCCAACACCACCGGCACAGTGACGG...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTTTCAGCCGACCACCAGGGCTGCTaGATGGCCTTCGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SQETSTHIGQMKLPQFSADHQGC*MAFGAW
Trigger: CCAAGCTCCGAAGGCCATCCAGCAGCCCTGGTGGTC...GGCTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTAGACACCTGGGTGGGTaGCTGCCTGCAAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTRHLGG*LPARRR
Trigger: CCTTCTCCTTGCAGGCAGCCACCCACCCAGGTGTCT...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp TTCCAAAGCGGCCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCTCTCGATTTTGGGCCTaGACAAAAATGTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: FQSGPRHCRYVPLSADRSSRFWA*TKMSRS
Trigger: ACTGCGGGACATTTTTGTTCAGGCCCAAAATCGAGA...GCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGCTTTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp GTGGCCCTCAACATCAGAGGTAGGGCATCTGGAAGTCTCAAAATGACCAAACAAATTGGGAGATGCAGCTaGCAGCCCTTCGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: VALNIRGRASGSLKMTKQIGRCS*QPFGPE
Trigger: TTCTGGGCCGAAGGGCTGTCAGCTGCATCTCCCAAT...TTGTTTGGTCATTTTGAGACTTCCAGATGCCCTACCTCTGATGTTGAGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR TCA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTAGGCGAAGGTTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTRRRLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAACCTTCGCCT...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR TCA 90 bp ACCTGGGGATCTTCTGGGCCTAGCACAGTGCCAAGCTCGCAATTAGTGTTCAAGATCCAACCCCATCTCTaGAGACACCTAACCCAAGCT +
Preference number: 4 (lower is better)
Translates to: TWGSSGPSTVPSSQLVFKIQPHL*RHLTQA
Trigger: AGCTTGGGTTAGGTGTCTTCAGAGATGGGGTTGGAT...CTTGAACACTAATTGCGAGCTTGGCACTGTGCTAGGCCCAGAAGATCCCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp TTATGCCCGGACAGCTCAGCCAAACCACAGGACCACCACCCAAGTTTTGGGTATACAGGCCAGGCAACATaGATGCTTGGATCTACTGCT +
Preference number: 4 (lower is better)
Translates to: LCPDSSAKPQDHHPSFGYTGQAT*MLGSTA
Trigger: AGCAGTAGATCCAAGCATGCATGTTGCCTGGCCTGT...ATACCCAAAACTTGGGTGGTGGTCCTGTGGTTTGGCTGAGCTGTCCGGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp AACAGAGAACCAGGTTATGCCCGGACAGCTCAGCCAAACCACAGGACCACCACCCCTTTCTGTACCGGCTaGAAGAGGAAGAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: NREPGYARTAQPNHRTTTPFCTG*KRKKKT
Trigger: AGTTTTCTTCTTCCTCTTGCAGCCGGTACAGAAAGG...GGTGGTGGTCCTGTGGTTTGGCTGAGCTGTCCGGGCATAACCTGGTTCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGTGGTCATATTGGCTTTaGCGGCAACCTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: DSNMPSQAFATIREVVNEWSYWL*RQPQDG
Trigger: CCCATCCTGAGGTTGCCGGCAAAGCCAATATGACCA...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp GACGTGACTCCTCTGCACAGCATCCGGGGATGGCTTTTTGGAGTGTCTCCCTTTAGATGCCCATCACGGTaGCATGATCACAAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: DVTPLHSIRGWLFGVSPFRCPSR*HDHKKL
Trigger: AAGCTTCTTGTGATCATGGCACCGTGATGGGCATCT...AAAGGGAGACACTCCAAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp ATCACCCATAACAGGAGACCAAGGAGTGATGAGGTCCTGCAAGTGGCAGTCAAGCAGGAGCATGCAAGATaGCCATCACGGTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: ITHNRRPRSDEVLQVAVKQEHAR*PSRCHD
Trigger: ATCATGGCACCGTGATGGGCATCTTGCATGCTCCTG...CTTGACTGCCACTTGCAGGACCTCATCACTCCTTGGTCTCCTGTTATGGGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCAACAGCACGGTCGCCATaGCTGAGGCCCCGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: ICRSHYYFSVVVILALPATARSP*LRPRCA
Trigger: CGCGCACCGGGGCCTCAGCCATGGCGACCGTGCTGT...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCTGAAGGAAGCTGTTTCACCCAGCGTACCTCTACCACAGCCTTTGCAAACTGTTGGCAGTACCACAACTaGGGCAGCCAAGGTACCGTT +
Preference number: 4 (lower is better)
Translates to: SEGSCFTQRTSTTAFANCWQYHN*GSQGTV
Trigger: AACGGTACCTTGGCTGCCCCAGTTGTGGTACTGCCA...ACAGTTTGCAAAGGCTGTGGTAGAGGTACGCTGGGTGAAACAGCTTCCTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp ATCACCCATAACAGGAGACCAAGGAGTGATGAGGTCCTGCAAGTGGCAGTCAAGGCTGCAATTCCCCAATaGCCAGAACCACAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ITHNRRPRSDEVLQVAVKAAIPQ*PEPQGL
Trigger: GAGACCTTGTGGTTCTGGCCATTGGGGAATTGCAGC...CTTGACTGCCACTTGCAGGACCTCATCACTCCTTGGTCTCCTGTTATGGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp AACAGAGAACCAGGTTATGCCCGGACAGCTCAGCCAAACCACAGGACCACCACCTCGCTTTTCCCATTCTaGCTCTTCTATCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: NREPGYARTAQPNHRTTTSLFPF*LFYLQR
Trigger: TCTCTGCAGATAGAAGAGCCAGAATGGGAAAAGCGA...GGTGGTGGTCCTGTGGTTTGGCTGAGCTGTCCGGGCATAACCTGGTTCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGCTGCAGTTGGAATCTaGTGCCTTCACCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: DSNMPSQAFATIREVVNEAAVGI*CLHHLE
Trigger: CTCCAGATGGTGAAGGCACCAGATTCCAACTGCAGC...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp CAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAAATGGCCTTCGGAGCTTaGCCCTGTTGTCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: QRLQHAFPSLCNHQGGGKMAFGA*PCCPGN
Trigger: GTTACCAGGACAACAGGGCCAAGCTCCGAAGGCCAT...TTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TACAGGAAAGAAGAGATGCAGGACAAAATGGTTGCATCCTGGACTCAAGTAGCAACCAGGGCTGCTGGATaGCCTTCGGAGCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: YRKEEMQDKMVASWTQVATRAAG*PSELGP
Trigger: AGGGCCAAGCTCCGAAGGCCATCCAGCAGCCCTGGT...TGCTACTTGAGTCCAGGATGCAACCATTTTGTCCTGCATCTCTTCTTTCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp TCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGAAGAAGTCTTCGGCCAATTTTGGGGGTaGACTCCTGTAGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SQAFATIREVVNEDEEVFGQFWG*TPVAEP
Trigger: TGGCTCAGCTACAGGAGTCCACCCCCAAAATTGGCC...GAAGACTTCTTCGTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GGTCATATTGGCTTTGCCGGCAACCTCAGGATGGGATTAGAGAAAGAAAGGAGCGGCCAATTTTGGGGGTaGACTCCTGTAGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GHIGFAGNLRMGLEKERSGQFWG*TPVAEP
Trigger: TGGCTCAGCTACAGGAGTCCACCCCCAAAATTGGCC...GCTCCTTTCTTTCTCTAATCCCATCCTGAGGTTGCCGGCAAAGCCAATATGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTCTTCCCCGGCAGCTTaGGCGCCCTGGACAGCACGG +
Preference number: 4 (lower is better)
Translates to: DPCICRSHYYFSVVVILASSPAA*APWTAR
Trigger: CCGTGCTGTCCAGGGCGCTCAAGCTGCCGGGGAAGA...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATGGTAGCCCTCCGTGGTaGCTTCTGAAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDGSPPW*LLKDVA
Trigger: AGCCACATCTTTCAGAAGTCACCACGGAGGGCTACC...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp TCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGAAGAAGTCTTCATTAGCAGCTGGTCTTaGGACACCTACTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: SQAFATIREVVNEDEEVFISSWS*DTYCTP
Trigger: GGGAGTGCAGTAGGTGTCTCAAGACCAGCTGCTAAT...GAAGACTTCTTCGTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp CAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAAATTAGCAGCTGGTCTTaGGACACCTACTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: QRLQHAFPSLCNHQGGGKISSWS*DTYCTP
Trigger: GGGAGTGCAGTAGGTGTCTCAAGACCAGCTGCTAAT...TTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGTCAGCTCCAAACATGTaGTATCTCGAGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DSNMPSQAFATIREVVNESAPNM*YLEPPQ
Trigger: CTGAGGAGGCTCGAGATATCACATGTTTGGAGCTGA...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp CCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCATGCAAGATGCGCTCAGTTCCTAGGATaGTATCGGAATTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PTSLQICAIVSRQEHARCAQFLG*YRNWEM
Trigger: CATCTCCCAATTCCGATATCATCCTAGGAACTGAGC...GCATCTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp TCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACCAGGGAGGTGGTAAATaGGGACGAAGAAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SNMPSQAFATIREVVNEDQGGGK*GRRSLL
Trigger: GAGAAGACTTCTTCGTCCTCATTTACCACCTCCCTG...GTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp ATCACCCATAACAGGAGACCAAGGAGTGATGAGGTCCTGCAAGTGGCAGTCAAGCACAAGAAGCTTAAGTaGCTTCTGCTGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ITHNRRPRSDEVLQVAVKHKKLK*LLLLLP
Trigger: TGGCAGCAGCAGCAGAAGTCACTTAAGCTTCTTGTG...CTTGACTGCCACTTGCAGGACCTCATCACTCCTTGGTCTCCTGTTATGGGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATGCAGGAAGACAGACGTaGGCACATATGACACCAGGG +
Preference number: 4 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDAGRQT*AHMTPG
Trigger: CCCTGGTGTCATATGTGCGCACGTCTGTCTTCCTGC...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGAGAACCAGGTTATaGCCGGACAGCTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHQRTRL*PDSSAK
Trigger: TTTGGCTGAGCTGTCCGGGCATAACCTGGTTCTCTG...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp CACGGTGCCATGATCACAAGAAGCTTAAGTGACTTCTGCTGCTGCTGCCACTACGGAGTGATGAGGTCCTaGAAGTGGCAGTCAAGAATG +
Preference number: 4 (lower is better)
Translates to: HGAMITRSLSDFCCCCHYGVMRS*KWQSRM
Trigger: CATTCTTGACTGCCACTTGCAGGACCTCATCACTCC...GTAGTGGCAGCAGCAGCAGAAGTCACTTAAGCTTCTTGTGATCATGGCACCGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp ACTGAGTCTGAACACGACGTGACTCCTCTGCACAGCATCCGGGGATGGCTTTTTGTCACTGCAGATATGTaGCATTGTCAGCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: TESEHDVTPLHSIRGWLFVTADM*HCQQTG
Trigger: TCCTGTCTGCTGACAATGGCACATATCTGCAGTGAC...AAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTCGTGTTCAGACTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp GATGCCCATCACGGTGCCATGATCACAAGAAGCTTAAGTGACTTCTGCTGCTGCCTCTACCACAGCCTTTaGAAACTGTCATCCAACCCC +
Preference number: 4 (lower is better)
Translates to: DAHHGAMITRSLSDFCCCLYHSL*KLSSNP
Trigger: GGGGTTGGATGACAGTTTGCAAAGGCTGTGGTAGAG...GCAGCAGCAGAAGTCACTTAAGCTTCTTGTGATCATGGCACCGTGATGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATTGCTGTGCAGATCTCTaGGAGGACAGGGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDCCADL*EDRGSG
Trigger: TCCTGATCCCCTGTCCTCCCAGAGATCTGCACAGCA...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACCTGTCACAAGGCAGATaGTTTCAGCCAAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SNMPSQAFATIREVVNEDLSQGR*FQPSFL
Trigger: CAGGAAGCTTGGCTGAAACCATCTGCCTTGTGACAG...GTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTTGGCAGTACCACAACTaGGGCAGCCAAGGTACCGTT +
Preference number: 4 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTWQYHN*GSQGTV
Trigger: AACGGTACCTTGGCTGCCCCAGTTGTGGTACTGCCA...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATTGGCAGTACCACAACTaGGGCAGCCAAGGTACCGTT +
Preference number: 4 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDWQYHN*GSQGTV
Trigger: AACGGTACCTTGGCTGCCCCAGTTGTGGTACTGCCA...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TACACTGGCTTTGTGTCATCAGGGCTTGGGAAACTGTCAGGTATTAAGGGCCCAGTCTTCATCCAAGTCTaGCAGTACCACAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: YTGFVSSGLGKLSGIKGPVFIQV*QYHNWG
Trigger: GCCCCAGTTGTGGTACTGCCAGACTTGGATGAAGAC...TGGGCCCTTAATACCTGACAGTTTCCCAAGCCCTGATGACACAAAGCCAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp ATCACCCATAACAGGAGACCAAGGAGTGATGAGGTCCTGCAAGTGGCAGTCAAGCAGAAAGCACAGATCTaGCTGCAATTCCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: ITHNRRPRSDEVLQVAVKQKAQI*LQFPNG
Trigger: GCCATTGGGGAATTGCAGCCAGATCTGTGCTTTCTG...CTTGACTGCCACTTGCAGGACCTCATCACTCCTTGGTCTCCTGTTATGGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATGCTGCAGTTGGAATCTaGTGCCTTCACCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHAAVGI*CLHHLE
Trigger: CTCCAGATGGTGAAGGCACCAGATTCCAACTGCAGC...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATCCAGATCCAGAAGGATaGAGGGGAACGCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDPDPEG*RGTQDA
Trigger: TGCATCCTGCGTTCCCCTCCATCCTTCTGGATCTGG...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp AAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATCCAGATCCAGAAGGATaGAGGGGAACGCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: KDSNMPSQAFATIREVVNPDPEG*RGTQDA
Trigger: TGCATCCTGCGTTCCCCTCCATCCTTCTGGATCTGG...ATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GTGGCCCTCAACATCAGAGGTAGGGCATCTGGAAGTCTCAAAATGACCAAACAACCTATCTTAGACACCTaGGTGGGTGGCTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: VALNIRGRASGSLKMTKQPILDT*VGGCLQ
Trigger: TTGCAGGCAGCCACCCACCCAGGTGTCTAAGATAGG...TTGTTTGGTCATTTTGAGACTTCCAGATGCCCTACCTCTGATGTTGAGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTCCTATCTTAGACACCTaGGTGGGTGGCTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTPILDT*VGGCLQ
Trigger: TTGCAGGCAGCCACCCACCCAGGTGTCTAAGATAGG...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TTCCAAAGCGGCCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCTCCAGTGTTTCCCACTaGCTGTACCATAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: FQSGPRHCRYVPLSADRSSSVSH*LYHSQN
Trigger: ATTCTGACTATGGTACAGCCAGTGGGAAACACTGGA...GCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGCTTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp AAGACACCTAACCCAAGCTACTCACTTTCCAAAGCGGCCCACGTCACTGCAGATCTGGTGATATTTACCTaGGGATCTTCTGGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: KTPNPSYSLSKAAHVTADLVIFT*GSSGPS
Trigger: GCTAGGCCCAGAAGATCCCCAGGTAAATATCACCAG...ATCTGCAGTGACGTGGGCCGCTTTGGAAAGTGAGTAGCTTGGGTTAGGTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCCAAATGGCTTTCCCTaGCGTTGCATTGAATGCGCT +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHPNGFP*RCIECA
Trigger: AGCGCATTCAATGCAACGTCAGGGAAAGCCATTTGG...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp CAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAACCAAATGGCTTTCCCTaGCGTTGCATTGAATGCGCT +
Preference number: 4 (lower is better)
Translates to: QRLQHAFPSLCNHQGGGKPNGFP*RCIECA
Trigger: AGCGCATTCAATGCAACGTCAGGGAAAGCCATTTGG...TTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp TCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGAAGAAGTCTTCCAGCCCCATTTGTGGTaGTGTAAACCTGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: SQAFATIREVVNEDEEVFQPHLW*CKPEDQ
Trigger: TTGGTCCTCAGGTTTACATCACCACAAATGGGGCTG...GAAGACTTCTTCGTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp AGGAGCATGCAAGATGCCCATCACGGTGCCATGATCACAAGAAGCTTAAGTGACCAGCCCCATTTGTGGTaGTGTAAACCTGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: RSMQDAHHGAMITRSLSDQPHLW*CKPEDQ
Trigger: TTGGTCCTCAGGTTTACATCACCACAAATGGGGCTG...GTCACTTAAGCTTCTTGTGATCATGGCACCGTGATGGGCATCTTGCATGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp TCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGCTCAGTTCCTAGGATaGTATCGGAATTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SNMPSQAFATIREVVNEDAQFLG*YRNWEM
Trigger: CATCTCCCAATTCCGATATCATCCTAGGAACTGAGC...GTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTGTTAATTCCAACCTCTaGAGCCGTCACTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTVNSNL*SRHCAG
Trigger: ACCGGCACAGTGACGGCTTCAGAGGTTGGAATTAAC...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp CAGCCAAATAGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTCAGAGATGGGTCACTaGGACTACATCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QPNRSCCRQRLQHAFPSLSEMGH*DYILLL
Trigger: GAGCAAGAGGATGTAGTCTCAGTGACCCATCTCTGA...AAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR TCA 90 bp CCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCATGCAAGATGCACCATAGTCAGAATCTaGAGGAAGCTGTTTCACCCA +
Preference number: 4 (lower is better)
Translates to: PTSLQICAIVSRQEHARCTIVRI*RKLFHP
Trigger: TGGGTGAAACAGCTTCCTTCAGATTCTGACTATGGT...GCATCTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp ACTGAGTCTGAACACGACGTGACTCCTCTGCACAGCATCCGGGGATGGCTTTTTTCTCCTTTTCTGTGCTaGCTTTGGACTGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TESEHDVTPLHSIRGWLFSPFLC*LWTESE
Trigger: TTCAGACTCAGTCCAAAGTCAGCACAGAAAAGGAGA...AAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTCGTGTTCAGACTCAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATACCCCTCCATTCTTCTaGAGGTTAAGCACCAGATCG +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHTPPFF*RLSTRS
Trigger: CGATCTGGTGCTTAACCTGCAGAAGAATGGAGGGGT...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp GGTCATATTGGCTTTGCCGGCAACCTCAGGATGGGATTAGAGAAAGAAAGGAGCTCTGGCTCTTCTATCTaGAGAGAAGGTGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GHIGFAGNLRMGLEKERSSGSSI*REGGEL
Trigger: CAGCTCACCACCTTCTCTGCAGATAGAAGAGCCAGA...GCTCCTTTCTTTCTCTAATCCCATCCTGAGGTTGCCGGCAAAGCCAATATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp CAGGGCTTGGGAAACTGTCAGGTATTAAGGGCCCATTCCATTCTCAGCCCTGCTGCCTTGAAGTCTCAATaGCCAGTAAGGTGTCAGATT +
Preference number: 4 (lower is better)
Translates to: QGLGNCQVLRAHSILSPAALKSQ*PVRCQI
Trigger: AATCTGACACCTTACTGGGCATTGAGACTTCAAGGC...AGCAGGGCTGAGAATGGAATGGGCCCTTAATACCTGACAGTTTCCCAAGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp TTATGCCCGGACAGCTCAGCCAAACCACAGGACCACCACCCAAGTTTTGGGTATTCAAAGACTCCAACATaGCTTCCCAAGCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LCPDSSAKPQDHHPSFGYSKTPT*LPKPLQ
Trigger: TTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGA...ATACCCAAAACTTGGGTGGTGGTCCTGTGGTTTGGCTGAGCTGTCCGGGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGTTCTGGGATTTGCCCTaGATAAACACAGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: DSNMPSQAFATIREVVNEFWDLP*INTVLC
Trigger: GCAGAGGACTGTGTTTATGCAGGGCAAATCCCAGAA...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp GTGGCCCTCAACATCAGAGGTAGGGCATCTGGAAGTCTCAAAATGACCAAACAATGGTCATATTGGCTTTaGCGGCAACCTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: VALNIRGRASGSLKMTKQWSYWL*RQPQDG
Trigger: CCCATCCTGAGGTTGCCGGCAAAGCCAATATGACCA...TTGTTTGGTCATTTTGAGACTTCCAGATGCCCTACCTCTGATGTTGAGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp TCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACTCATCACTGTCAGCCTaGGTAAGTGGATCATACTCC +
Preference number: 4 (lower is better)
Translates to: SNMPSQAFATIREVVNEDSSLSA*VSGSYS
Trigger: GGAGTATGATCCACTTACCCAGGCTGACAGTGATGA...GTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp AAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATATCAGCCAATTCCAATaGAGACAGGTCCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: KDSNMPSQAFATIREVVNISQFQ*RQVPTS
Trigger: GGAGGTGGGGACCTGTCTCCATTGGAATTGGCTGAT...ATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TACTCACTTTCCAAAGCGGCCCACGTCACTGCAGATATGTGCCATTGTCAGCAGGGTGCCTTCACCATCTaGAGTAGTTCAACACCATCA +
Preference number: 4 (lower is better)
Translates to: YSLSKAAHVTADMCHCQQGAFTI*SSSTPS
Trigger: TGATGGTGTTGAACTACTCCAGATGGTGAAGGCACC...CTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGCTTTGGAAAGTGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp TCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGGTAACTCCAAACAATaGAGCCAGAGTCACCATCCA +
Preference number: 4 (lower is better)
Translates to: SNMPSQAFATIREVVNEDGNSKQ*SQSHHP
Trigger: TGGATGGTGACTCTGGCTCCATTGTTTGGAGTTACC...GTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATACCATACCACACATTTaGGGGATGGCAAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHTIPHI*GMAKTG
Trigger: CCCCGTTTTTGCCATCCCCCAAATGTGTGGTATGGT...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCACCCATAACAGGAGACCAAGGAGTGATGAGGTCCTGCAAGTGGCAGTCAAGAATGAGGTCCTGCAAGTaGCAGTCAAGAATGGCTAAG +
Preference number: 4 (lower is better)
Translates to: SPITGDQGVMRSCKWQSRMRSCK*QSRMAK
Trigger: CTTAGCCATTCTTGACTGCCACTTGCAGGACCTCAT...TCTTGACTGCCACTTGCAGGACCTCATCACTCCTTGGTCTCCTGTTATGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp CTTTTCTCAGCTGTGAGCTTCGGAAGGGCAGGAACTGGTGATATTTACCTGGGGGAGGGAGGAGTTTTCTaGGCTGTTTGTCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LFSAVSFGRAGTGDIYLGEGGVF*AVCHLL
Trigger: AAGGAGATGACAAACAGCCCAGAAAACTCCTCCCTC...CCCCAGGTAAATATCACCAGTTCCTGCCCTTCCGAAGCTCACAGCTGAGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp GATGCAGAGAAGACATACAGCAGGATAAGGACATCAAAGGCTCCTGACTTCCAGTCAGCTCCAAACATGTaGTATCTCGAGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DAEKTYSRIRTSKAPDFQSAPNM*YLEPPQ
Trigger: CTGAGGAGGCTCGAGATATCACATGTTTGGAGCTGA...CTGGAAGTCAGGAGCCTTTGATGTCCTTATCCTGCTGTATGTCTTCTCTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp GTGGCCCTCAACATCAGAGGTAGGGCATCTGGAAGTCTCAAAATGACCAAACAATCTGGCTCTTCTATCTaGAGAGAAGGTGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VALNIRGRASGSLKMTKQSGSSI*REGGEL
Trigger: CAGCTCACCACCTTCTCTGCAGATAGAAGAGCCAGA...TTGTTTGGTCATTTTGAGACTTCCAGATGCCCTACCTCTGATGTTGAGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp GATGCAGAGAAGACATACAGCAGGATAAGGACATCAAAGGCTCCTGACTTCCAGGCCAGGCAACATGCATaGTTGGATCTACTGCTACCA +
Preference number: 4 (lower is better)
Translates to: DAEKTYSRIRTSKAPDFQARQHA*LDLLLP
Trigger: TGGTAGCAGTAGATCCAAGCATGCATGTTGCCTGGC...CTGGAAGTCAGGAGCCTTTGATGTCCTTATCCTGCTGTATGTCTTCTCTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp GGTCATATTGGCTTTGCCGGCAACCTCAGGATGGGATTAGAGAAAGAAAGGAGCTCATCACTGTCAGCCTaGGTAAGTGGATCATACTCC +
Preference number: 4 (lower is better)
Translates to: GHIGFAGNLRMGLEKERSSSLSA*VSGSYS
Trigger: GGAGTATGATCCACTTACCCAGGCTGACAGTGATGA...GCTCCTTTCTTTCTCTAATCCCATCCTGAGGTTGCCGGCAAAGCCAATATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGAAGAAGTCTTCTTCAGCCAAGCTTCCTaGCATCAGCTCCAAACATGT +
Preference number: 4 (lower is better)
Translates to: SQAFATIREVVNEDEEVFFSQAS*HQLQTC
Trigger: ACATGTTTGGAGCTGATGCCAGGAAGCTTGGCTGAA...GAAGACTTCTTCGTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GTGGCCCTCAACATCAGAGGTAGGGCATCTGGAAGTCTCAAAATGACCAAACAACTGTCACAAGGCAGATaGTTTCAGCCAAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VALNIRGRASGSLKMTKQLSQGR*FQPSFL
Trigger: CAGGAAGCTTGGCTGAAACCATCTGCCTTGTGACAG...TTGTTTGGTCATTTTGAGACTTCCAGATGCCCTACCTCTGATGTTGAGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTCAGAAAGCACAGATCTaGCTGCAATTCCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTQKAQI*LQFPNG
Trigger: GCCATTGGGGAATTGCAGCCAGATCTGTGCTTTCTG...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GATGCCCATCACGGTGCCATGATCACAAGAAGCTTAAGTGACTTCTGCTGCTGCTCGCTTTTCCCATTCTaGCTCTTCTATCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: DAHHGAMITRSLSDFCCCSLFPF*LFYLQR
Trigger: TCTCTGCAGATAGAAGAGCCAGAATGGGAAAAGCGA...GCAGCAGCAGAAGTCACTTAAGCTTCTTGTGATCATGGCACCGTGATGGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp CAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAAGGTGCCTTCACCATCTaGAGTAGTTCAACACCATCA +
Preference number: 4 (lower is better)
Translates to: QRLQHAFPSLCNHQGGGKGAFTI*SSSTPS
Trigger: TGATGGTGTTGAACTACTCCAGATGGTGAAGGCACC...TTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GGTCATATTGGCTTTGCCGGCAACCTCAGGATGGGATTAGAGAAAGAAAGGAGCGGTAACTCCAAACAATaGAGCCAGAGTCACCATCCA +
Preference number: 4 (lower is better)
Translates to: GHIGFAGNLRMGLEKERSGNSKQ*SQSHHP
Trigger: TGGATGGTGACTCTGGCTCCATTGTTTGGAGTTACC...GCTCCTTTCTTTCTCTAATCCCATCCTGAGGTTGCCGGCAAAGCCAATATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp ACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTCCGTCACTGTGCCGGTaGTGTTGGCCAGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: THFTRNQHPHWSDEASSIPSLCR*CWPDPE
Trigger: TTCTGGATCTGGCCAACACCACCGGCACAGTGACGG...AATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATGGACTTGGTCAGAGATaGGTCACTGAGACTACATCC +
Preference number: 4 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDGLGQR*VTETTS
Trigger: GGATGTAGTCTCAGTGACCCATCTCTGACCAAGTCC...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR TCA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATTGCAACCTCAGCATCTaGGTCGGGTTCTGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINCNLSI*VGFWRF
Trigger: GAAGCGCCAGAACCCGACTCAGATGCTGAGGTTGCA...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp AAGTCAATCTTTCGAACCCCTCAGTTCTCCAGAGATCAGCCTTCTGAAATCCTCCCAAATGGCTTTCCCTaGCGTTGCATTGAATGCGCT +
Preference number: 4 (lower is better)
Translates to: KSIFRTPQFSRDQPSEILPNGFP*RCIECA
Trigger: AGCGCATTCAATGCAACGTCAGGGAAAGCCATTTGG...GAGGATTTCAGAAGGCTGATCTCTGGAGAACTGAGGGGTTCGAAAGATTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp GGTCATATTGGCTTTGCCGGCAACCTCAGGATGGGATTAGAGAAAGAAAGGAGCCCCACATTGGTCAGATaGAGCTTCCTCAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: GHIGFAGNLRMGLEKERSPTLVR*SFLNFQ
Trigger: CTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGG...GCTCCTTTCTTTCTCTAATCCCATCCTGAGGTTGCCGGCAAAGCCAATATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGCCAAATAGATCATaGTGCCGTCAAAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHQPNRS*CRQRLQ
Trigger: TTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp GTGGCCCTCAACATCAGAGGTAGGGCATCTGGAAGTCTCAAAATGACCAAACAAGCAGGACAAAATGGTTaGATCCTGGACTCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VALNIRGRASGSLKMTKQAGQNG*ILDSSS
Trigger: GCTACTTGAGTCCAGGATGCAACCATTTTGTCCTGC...TTGTTTGGTCATTTTGAGACTTCCAGATGCCCTACCTCTGATGTTGAGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp AAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATCATGCTTGGATCTACTaGTACCAACCTCCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: KDSNMPSQAFATIREVVNHAWIY*YQPPVR
Trigger: CCTAACAGGAGGTTGGTAGCAGTAGATCCAAGCATG...ATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCACCTGGGTGGGTGGCTaGCTGCAAGGAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFTWVGG*LQGEGG
Trigger: GCCTCCTTCTCCTTGCAGGCAGCCACCCACCCAGGT...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATTTCAGCCAAGCTTCCTaGCATCAGCTCCAAACATGT +
Preference number: 4 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDFSQAS*HQLQTC
Trigger: ACATGTTTGGAGCTGATGCCAGGAAGCTTGGCTGAA...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGGTTTAAAGTCCAAATaGCTTTCCCTGACGTTGCAT +
Preference number: 4 (lower is better)
Translates to: SNMPSQAFATIREVVNEDGLKSK*LSLTLH
Trigger: ATGCAACGTCAGGGAAAGCCATTTGGACTTTAAACC...GTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp ATCACCCATAACAGGAGACCAAGGAGTGATGAGGTCCTGCAAGTGGCAGTCAAGGGTTTAAAGTCCAAATaGCTTTCCCTGACGTTGCAT +
Preference number: 4 (lower is better)
Translates to: ITHNRRPRSDEVLQVAVKGLKSK*LSLTLH
Trigger: ATGCAACGTCAGGGAAAGCCATTTGGACTTTAAACC...CTTGACTGCCACTTGCAGGACCTCATCACTCCTTGGTCTCCTGTTATGGGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp CAGCCAAATAGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTCAGCCAAGGTACCGTTaGACAAGTAGTTTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: QPNRSCCRQRLQHAFPSLQPRYR*TSSLGL
Trigger: TAAACCCAAACTACTTGTCCAACGGTACCTTGGCTG...AAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TACACTGGCTTTGTGTCATCAGGGCTTGGGAAACTGTCAGGTATTAAGGGCCCACAGCCAAGGTACCGTTaGACAAGTAGTTTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: YTGFVSSGLGKLSGIKGPQPRYR*TSSLGL
Trigger: TAAACCCAAACTACTTGTCCAACGGTACCTTGGCTG...TGGGCCCTTAATACCTGACAGTTTCCCAAGCCCTGATGACACAAAGCCAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTCACAGGTCGACCCACTaGATTTCCGGTCCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: DPCICRSHYYFSVVVILAHRSTH*ISGPAR
Trigger: TCTGGCCGGACCGGAAATCCAGTGGGTCGACCTGTG...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp AGGAGCATGCAAGATGCCCATCACGGTGCCATGATCACAAGAAGCTTAAGTGACAGGAAGACAGACTTCTaGTCTGAAGTAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RSMQDAHHGAMITRSLSDRKTDF*SEVTAE
Trigger: CTCAGCAGTTACTTCAGACCAGAAGTCTGTCTTCCT...GTCACTTAAGCTTCTTGTGATCATGGCACCGTGATGGGCATCTTGCATGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp GGTCATATTGGCTTTGCCGGCAACCTCAGGATGGGATTAGAGAAAGAAAGGAGCAGATGCAGGACAAAATaGTTGCATCCTGGACTCAAG +
Preference number: 4 (lower is better)
Translates to: GHIGFAGNLRMGLEKERSRCRTK*LHPGLK
Trigger: CTTGAGTCCAGGATGCAACCATTTTGTCCTGCATCT...GCTCCTTTCTTTCTCTAATCCCATCCTGAGGTTGCCGGCAAAGCCAATATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR TCA 90 bp ACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTCTCCGTGGTGACTTCTaGAAGATGTGGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: THFTRNQHPHWSDEASSILRGDF*KMWLCS
Trigger: GCTGCAAAGCCACATCTTTCAGAAGTCACCACGGAG...AATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGGTAGCCCTCCGTGGTaGCTTCTGAAAGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINGSPPW*LLKDVA
Trigger: AGCCACATCTTTCAGAAGTCACCACGGAGGGCTACC...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp TCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTTTCAGCCGCTCAGTTCCTAGGATaGTATCGGAATTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SQETSTHIGQMKLPQFSAAQFLG*YRNWEM
Trigger: CATCTCCCAATTCCGATATCATCCTAGGAACTGAGC...GGCTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp ACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTGTTAATTCCAACCTCTaGAGCCGTCACTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: THFTRNQHPHWSDEASSIVNSNL*SRHCAG
Trigger: ACCGGCACAGTGACGGCTTCAGAGGTTGGAATTAAC...AATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp GATGCCCATCACGGTGCCATGATCACAAGAAGCTTAAGTGACTTCTGCTGCTGCTGTTGGAAGAAAAGTTaGATGATTCCAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: DAHHGAMITRSLSDFCCCCWKKS*MIPVFP
Trigger: GGGAAACACTGGAATCATTCAACTTTTCTTCCAACA...GCAGCAGCAGAAGTCACTTAAGCTTCTTGTGATCATGGCACCGTGATGGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATAAAAATGTCCCGCAGTaGGACAGCTTGTATATTTCC +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHKNVPQ*DSLYIS
Trigger: GGAAATATACAAGCTGTCGCACTGCGGGACATTTTT...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATGCCTTGAAGTCTCAATaGCCAGTAAGGTGTCAGATT +
Preference number: 4 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDALKSQ*PVRCQI
Trigger: AATCTGACACCTTACTGGGCATTGAGACTTCAAGGC...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGACTCCATCCTGTATCTaGAGAAGGAAATCTAATGTC +
Preference number: 4 (lower is better)
Translates to: DSNMPSQAFATIREVVNETPSCI*RRKSNV
Trigger: GACATTAGATTTCCTTCTGCAGATACAGGATGGAGT...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp AAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATTCAAAGACTCCAACATaGCTTCCCAAGCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: KDSNMPSQAFATIREVVNSKTPT*LPKPLQ
Trigger: TTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGA...ATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp CAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAAGGTTTAAAGTCCAAATaGCTTTCCCTGACGTTGCAT +
Preference number: 4 (lower is better)
Translates to: QRLQHAFPSLCNHQGGGKGLKSK*LSLTLH
Trigger: ATGCAACGTCAGGGAAAGCCATTTGGACTTTAAACC...TTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp ACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTGTCTTCATCCAAGTCTaGCAGTACCACAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: THFTRNQHPHWSDEASSIVFIQV*QYHNWG
Trigger: GCCCCAGTTGTGGTACTGCCAGACTTGGATGAAGAC...AATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTTTCAGCCGGTGCCTTCACCATCTaGAGTAGTTCAACACCATCA +
Preference number: 4 (lower is better)
Translates to: SQETSTHIGQMKLPQFSAGAFTI*SSSTPS
Trigger: TGATGGTGTTGAACTACTCCAGATGGTGAAGGCACC...GGCTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TACAGGAAAGAAGAGATGCAGGACAAAATGGTTGCATCCTGGACTCAAGTAGCAGAAGGTTGCTGCAGTTaGAATCTGGTGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: YRKEEMQDKMVASWTQVAEGCCS*NLVPSP
Trigger: TGGTGAAGGCACCAGATTCCAACTGCAGCAACCTTC...TGCTACTTGAGTCCAGGATGCAACCATTTTGTCCTGCATCTCTTCTTTCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp AAGTCAATCTTTCGAACCCCTCAGTTCTCCAGAGATCAGCCTTCTGAAATCCTCGGTAACTCCAAACAATaGAGCCAGAGTCACCATCCA +
Preference number: 4 (lower is better)
Translates to: KSIFRTPQFSRDQPSEILGNSKQ*SQSHHP
Trigger: TGGATGGTGACTCTGGCTCCATTGTTTGGAGTTACC...GAGGATTTCAGAAGGCTGATCTCTGGAGAACTGAGGGGTTCGAAAGATTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATAAAGGTGGTGAAGGCTaGGCGGCTCAGTTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINKGGEG*AAQFLG
Trigger: TCCTAGGAACTGAGCCGCCCAGCCTTCACCACCTTT...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGAGAGATGAAAATGCTTaGATGGCTAACTCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: DSNMPSQAFATIREVVNERDENA*MANSVF
Trigger: GAAGACTGAGTTAGCCATCCAAGCATTTTCATCTCT...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp CATCCAACCCCATCTCTGAAGACACCTAACCCAAGCTACTCACTTTCCAAAGCGAGTGGCAGTCAAGAATaGCTAAGAAATTCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: HPTPSLKTPNPSYSLSKASGSQE*LRNSAF
Trigger: AAAGGCCGAATTTCTTAGCCATTCTTGACTGCCACT...CGCTTTGGAAAGTGAGTAGCTTGGGTTAGGTGTCTTCAGAGATGGGGTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp CAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAACACTTCTTCTGCAACTaGAGATTCCATCAGATTAGA +
Preference number: 4 (lower is better)
Translates to: QRLQHAFPSLCNHQGGGKHFFCN*RFHQIR
Trigger: TCTAATCTGATGGAATCTTCAGTTGCAGAAGAAGTG...TTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp CAGCCAAATAGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTAGTTCTCCTCTAAGTTaGAGACAGCATGCAAACATA +
Preference number: 4 (lower is better)
Translates to: QPNRSCCRQRLQHAFPSLSSPLS*RQHANI
Trigger: TATGTTTGCATGCTGTCTTCAACTTAGAGGAGAACT...AAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR TCA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATTTAAATAGTGCTTCCTaGCAATATACCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDLNSAS*QYTSWL
Trigger: GAGCCAGCTGGTATATTGTCAGGAAGCACTATTTAA...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCCTGAAGCCGTCACTGTaGCGGTGGTGTTGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFLKPSL*RWCWPD
Trigger: ATCTGGCCAACACCACCGGCACAGTGACGGCTTCAG...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTCCAAATAGATCATGCTaGCGTCAAAGACTCCAACAT +
Preference number: 4 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTPNRSC*RQRLQH
Trigger: ATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGG...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTTTCAGCCAGTCATAGACTTCACTaGCTTTCCCAGCAAGACTTC +
Preference number: 4 (lower is better)
Translates to: SQETSTHIGQMKLPQFSASHRLH*LSQQDF
Trigger: GAAGTCTTGCTGGGAAAGCCAGTGAAGTCTATGACT...GGCTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATAAAATGGTTGCATCCTaGACTCAAGTAGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHKMVAS*TQVAEE
Trigger: TTCTTCTGCTACTTGAGTCCAGGATGCAACCATTTT...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp TACAGGAAAGAAGAGATGCAGGACAAAATGGTTGCATCCTGGACTCAAGTAGCAGGCAACATGCATGCTTaGATCTACTGCTACCAACCT +
Preference number: 4 (lower is better)
Translates to: YRKEEMQDKMVASWTQVAGNMHA*IYCYQP
Trigger: AGGTTGGTAGCAGTAGATCCAAGCATGCATGTTGCC...TGCTACTTGAGTCCAGGATGCAACCATTTTGTCCTGCATCTCTTCTTTCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp ACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTACCATACCACACATTTaGGGGATGGCAAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: THFTRNQHPHWSDEASSITIPHI*GMAKTG
Trigger: CCCCGTTTTTGCCATCCCCCAAATGTGTGGTATGGT...AATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp TCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTTTCAGCCTTAAATAGTGCTTCCTaGCAATATACCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SQETSTHIGQMKLPQFSALNSAS*QYTSWL
Trigger: GAGCCAGCTGGTATATTGTCAGGAAGCACTATTTAA...GGCTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp AAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATACTCCATCCTGTATCTaGAGAAGGAAATCTAATGTC +
Preference number: 4 (lower is better)
Translates to: KDSNMPSQAFATIREVVNTPSCI*RRKSNV
Trigger: GACATTAGATTTCCTTCTGCAGATACAGGATGGAGT...ATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp GAGATTTCCTGGAAGTGCTACACGTTACTTCTGCTTACAGCACATCGGCCAGAAACTCCATCCTGTATCTaGAGAAGGAAATCTAATGTC +
Preference number: 4 (lower is better)
Translates to: EISWKCYTLLLLTAHRPETPSCI*RRKSNV
Trigger: GACATTAGATTTCCTTCTGCAGATACAGGATGGAGT...TTCTGGCCGATGTGCTGTAAGCAGAAGTAACGTGTAGCACTTCCAGGAAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTGCTGCAATTCCCCAATaGCCAGAACCACAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: DPCICRSHYYFSVVVILAAAIPQ*PEPQGL
Trigger: GAGACCTTGTGGTTCTGGCCATTGGGGAATTGCAGC...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATCAGAAAGCACAGATCTaGCTGCAATTCCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINQKAQI*LQFPNG
Trigger: GCCATTGGGGAATTGCAGCCAGATCTGTGCTTTCTG...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCATGGCCTTCGGAGCTTaGCCCTGTTGTCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFMAFGA*PCCPGN
Trigger: GTTACCAGGACAACAGGGCCAAGCTCCGAAGGCCAT...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTGTAGTCCCAGCTACTTaGGAGGCTAAGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: DPCICRSHYYFSVVVILAVVPAT*EAKAGE
Trigger: TTCTCCAGCCTTAGCCTCCCAAGTAGCTGGGACTAC...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp CACGGTGCCATGATCACAAGAAGCTTAAGTGACTTCTGCTGCTGCTGCCACTACTATAAAGAGATTTCCTaGAAGTGCTACACGTTACTT +
Preference number: 4 (lower is better)
Translates to: HGAMITRSLSDFCCCCHYYKEIS*KCYTLL
Trigger: AAGTAACGTGTAGCACTTCCAGGAAATCTCTTTATA...GTAGTGGCAGCAGCAGCAGAAGTCACTTAAGCTTCTTGTGATCATGGCACCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCAACCCCTCCATTCTTCTaGAGGTTAAGCACCAGATCG +
Preference number: 4 (lower is better)
Translates to: ICRSHYYFSVVVILALPATPPFF*RLSTRS
Trigger: CGATCTGGTGCTTAACCTGCAGAAGAATGGAGGGGT...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp ACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTGCCTTGAAGTCTCAATaGCCAGTAAGGTGTCAGATT +
Preference number: 4 (lower is better)
Translates to: THFTRNQHPHWSDEASSIALKSQ*PVRCQI
Trigger: AATCTGACACCTTACTGGGCATTGAGACTTCAAGGC...AATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp TCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTTTCAGCCCCCTATAGAAAAAGATaGAGAGAAGACATACAGCAG +
Preference number: 4 (lower is better)
Translates to: SQETSTHIGQMKLPQFSAPYRKR*REDIQQ
Trigger: CTGCTGTATGTCTTCTCTGCATCTTTTTCTATAGGG...GGCTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCGTCTTCATCCAAGTCTaGCAGTACCACAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFVFIQV*QYHNWG
Trigger: GCCCCAGTTGTGGTACTGCCAGACTTGGATGAAGAC...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GGACAAAATGGTTGCATCCTGGACTCAAGTAGCAGAAGAAAAAGTCCAGAAACAAGGAAGACAGACTTCTaGTCTGAAGTAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GQNGCILDSSSRRKSPETRKTDF*SEVTAE
Trigger: CTCAGCAGTTACTTCAGACCAGAAGTCTGTCTTCCT...TGTTTCTGGACTTTTTCTTCTGCTACTTGAGTCCAGGATGCAACCATTTTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp CAGCCAAATAGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTATCCCAGAAATTATCTaGAATCATTCCCATACTCTA +
Preference number: 4 (lower is better)
Translates to: QPNRSCCRQRLQHAFPSLIPEII*NHSHTL
Trigger: TAGAGTATGGGAATGATTCCAGATAATTTCTGGGAT...AAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR CAA 72 bp TCTGAATTAATTACACTGGCTTTGTGTCATCAGGGCTaGGGAAACTGTCAGGTATTAAGGGCCCATTCCATT +
Preference number: 4 (lower is better)
Translates to: SELITLALCHQG*GNCQVLRAHSI
Trigger: AATGGAATGGGCCCTTAATACCTGACAGTTTCCCAAGCCCTGATGACACAAAGCCAGTGTAATTAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR TCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCCAGCCCCATTTGTGGTaGTGTAAACCTGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFQPHLW*CKPEDQ
Trigger: TTGGTCCTCAGGTTTACATCACCACAAATGGGGCTG...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTCTCGATTTTGGGCCTaGACAAAAATGTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: DPCICRSHYYFSVVVILASRFWA*TKMSRS
Trigger: ACTGCGGGACATTTTTGTTCAGGCCCAAAATCGAGA...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCCAGGGAGGTGGTAAATaGGGACGAAGAAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFQGGGK*GRRSLL
Trigger: GAGAAGACTTCTTCGTCCTCATTTACCACCTCCCTG...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATAGGTGCACTCAGGGATaGCCTATCAAGGTTATTCAA +
Preference number: 4 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINRCTQG*PIKVIQ
Trigger: TTGAATAACCTTGATAGGTCATCCCTGAGTGCACCT...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATTCGCTTTTCCCATTCTaGCTCTTCTATCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINSLFPF*LFYLQR
Trigger: TCTCTGCAGATAGAAGAGCCAGAATGGGAAAAGCGA...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCGAAGGTTGCTGCAGTTaGAATCTGGTGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFEGCCS*NLVPSP
Trigger: TGGTGAAGGCACCAGATTCCAACTGCAGCAACCTTC...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCAGAACTGATTTTACAGTaGCAGGAGAGTAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: ICRSHYYFSVVVILALPAELILQ*QESREG
Trigger: ACCCTCTCTACTCTCCTGTCACTGTAAAATCAGTTC...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCAAGAAACTGGATCCCTaGAGCTTAGGACATACCTGG +
Preference number: 4 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFKKLDP*SLGHTW
Trigger: CCAGGTATGTCCTAAGCTTCAGGGATCCAGTTTCTT...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR TCA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCACCCACATTGGTCAGATaGAGCTTCCTCAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: ICRSHYYFSVVVILALPAPTLVR*SFLNFQ
Trigger: CTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGG...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTCAGCCAAATAGATCATaGTGCCGTCAAAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: DPCICRSHYYFSVVVILAQPNRS*CRQRLQ
Trigger: TTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTCAGCCAAGGTACCGTTaGACAAGTAGTTTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: DPCICRSHYYFSVVVILAQPRYR*TSSLGL
Trigger: TAAACCCAAACTACTTGTCCAACGGTACCTTGGCTG...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTAGGAAGACAGACTTCTaGTCTGAAGTAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: DPCICRSHYYFSVVVILARKTDF*SEVTAE
Trigger: CTCAGCAGTTACTTCAGACCAGAAGTCTGTCTTCCT...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CCA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATCATAATGCCTGTCAGTaGGTAATTAACAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINHNACQ*VINRDP
Trigger: GGGATCTCTGTTAATTACCCACTGACAGGCATTATG...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR GCA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCACCAAATAGATCATGCTaGCGTCAAAGACTCCAACAT +
Preference number: 4 (lower is better)
Translates to: ICRSHYYFSVVVILALPAPNRSC*RQRLQH
Trigger: ATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGG...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR TCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTCACTTCTTCTGCAACTaGAGATTCCATCAGATTAGA +
Preference number: 4 (lower is better)
Translates to: DPCICRSHYYFSVVVILAHFFCN*RFHQIR
Trigger: TCTAATCTGATGGAATCTTCAGTTGCAGAAGAAGTG...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR GCA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCATAAACACAGTCCTCTaGCCAAACAATCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFINTVL*PNNPTK
Trigger: TTTGGTGGGATTGTTTGGGCAGAGGACTGTGTTTAT...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCAATGAAAATGCTTGGATaGCTAACTCAGTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: ICRSHYYFSVVVILALPAMKMLG*LTQSST
Trigger: AGTGGAAGACTGAGTTAGCCATCCAAGCATTTTCAT...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CCA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCATTCCTCTTATCTTTCTaGGATTTGCCCTGCATAAAC +
Preference number: 4 (lower is better)
Translates to: ICRSHYYFSVVVILALPAFLLSF*DLPCIN
Trigger: GTTTATGCAGGGCAAATCCCAGAAAGATAAGAGGAA...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
3UTR CAA 72 bp ACAGTGCCAAGCTCGCAATTAGTGTTCAAGAAATGTTaGTTGGAAGAAAAGTTGAATGATTCCAGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TVPSSQLVFKKC*LEEKLNDSSVS
Trigger: GGAAACACTGGAATCATTCAACTTTTCTTCCAACAAACATTTCTTGAACACTAATTGCGAGCTTGGCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR GCA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTTCCCAAAATACAATaGTTCAAAGGCTCTACAGGA +
Preference number: 4 (lower is better)
Translates to: DPCICRSHYYFSVVVILAFPKIQ*FKGSTG
Trigger: TCCTGTAGAGCCTTTGAAGCATTGTATTTTGGGAAA...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS GCA 90 bp GAGACAGGTCCCCACCTCCCTGGGAGCCCAAGTGGCGGCTCCAGGTaGTGTGCAGATCTCTGGGAGGACAGGGGATCAGGAAAGCACACA +
Preference number: 5 (lower is better)
Translates to: ETGPHLPGSPSGGSR*CADLWEDRGSGKHT
Trigger: TGTGTGCTTTCCTGATCCCCTGTCCTCCCAGAGATCTGCACAGCACCTGGAGCCGCCACTTGGGCTCCCAGGGAGGTGGGGACCTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 90 bp CTCCCTGGGAGCCCAAGTGGCGGCTCCAGGTGCTGTGCAGATCTCTaGGAGGACAGGGGATCAGGAAAGCACACAGGAGCACCAGGATCA +
Preference number: 5 (lower is better)
Translates to: LPGSPSGGSRCCADL*EDRGSGKHTGAPGS
Trigger: TGATCCTGGTGCTCCTGTGTGCTTTCCTGATCCCCTGTCCTCCCAGAGATCTGCACAGCACCTGGAGCCGCCACTTGGGCTCCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS TCA 90 bp CATCGAGATCCCCAAAGTCAGCAGGAAGACAGACGTGCGCACATATaGCACCAGGGAGGAGGCCGCCTTCTGTTCCAGGCCCCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: HRDPQSQQEDRRAHI*HQGGGRLLFQAPKG
Trigger: CCCCTTGGGGGCCTGGAACAGAAGGCGGCCTCCTCCCTGGTGTCATATGTGCGCACGTCTGTCTTCCTGCTGACTTTGGGGATCTCGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 90 bp CTTGGCCCTGTTGTCCCTCTGAAGCCGTCACTGTGCCGGTGGTGTTaGCCAGATCCAGAAGGATGGAGGGGAACGCAGGATGCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: LGPVVPLKPSLCRWC*PDPEGWRGTQDAGG
Trigger: ACCTCCTGCATCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGACAACAGGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS CCA 90 bp TCGGAGCTTGGCCCTGTTGTCCCTCTGAAGCCGTCACTGTGCCGGTaGTGTTGGCCAGATCCAGAAGGATGGAGGGGAACGCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: SELGPVVPLKPSLCR*CWPDPEGWRGTQDA
Trigger: TGCATCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGACAACAGGGCCAAGCTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS CCA 90 bp AGTGCCCACCGTAGACTAAGCTTGCTGACCACCAGGGCTGCTGGATaGCCTTCGGAGCTTGGCCCTGTTGTCCCTCTGAAGCCGTCACTG +
Preference number: 5 (lower is better)
Translates to: SAHRRLSLLTTRAAG*PSELGPVVPLKPSL
Trigger: CAGTGACGGCTTCAGAGGGACAACAGGGCCAAGCTCCGAAGGCCATCCAGCAGCCCTGGTGGTCAGCAAGCTTAGTCTACGGTGGGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS GCA 90 bp GCACCAGGATCATCGAGATCCCCAAAGTCAGCAGGAAGACAGACGTaGGCACATATGACACCAGGGAGGAGGCCGCCTTCTGTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: APGSSRSPKSAGRQT*AHMTPGRRPPSVPG
Trigger: GCCTGGAACAGAAGGCGGCCTCCTCCCTGGTGTCATATGTGCGCACGTCTGTCTTCCTGCTGACTTTGGGGATCTCGATGATCCTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 90 bp CCCGCCCAGACTGGACAACACGGAACAAGTGGGGAGGTGATTAAGTaGGTGCTGGACAAGAGTCTTCCCTTCAGAGGAGGCAGCAAGGGA +
Preference number: 5 (lower is better)
Translates to: PAQTGQHGTSGEVIK*VLDKSLPFRGGSKG
Trigger: TCCCTTGCTGCCTCCTCTGAAGGGAAGACTCTTGTCCAGCACCCACTTAATCACCTCCCCACTTGTTCCGTGTTGTCCAGTCTGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540455.1
CDS CCA 90 bp AATTCGGCCTTTAACCCTCTGAAGCCGTCACTGTGCCGGTGGTGTTaGCCAGATCCAGAAGGATGGAGGGGAACGCAGGATGCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: NSAFNPLKPSLCRWC*PDPEGWRGTQDAGG
Trigger: ACCTCCTGCATCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGTTAAAGGCCGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS CCA 90 bp CAGAGGAGGCAGCAAGGGAAGGCAGAGTTAATAGCCTGTGATCGGTaGGGGACAGTAAGAGGCCCCTGCATTAGAAGGCTATGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: QRRQQGKAELIACDR*GTVRGPCIRRLWEG
Trigger: GCCTTCCCATAGCCTTCTAATGCAGGGGCCTCTTACTGTCCCCCACCGATCACAGGCTATTAACTCTGCCTTCCCTTGCTGCCTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540455.1
CDS-3UTR CAA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATTTCTTCCCCGGCAGCTaGAGCGCCCTGGACAGCACG +
Preference number: 5 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHFFPGS*SALDST
Trigger: CGTGCTGTCCAGGGCGCTCAAGCTGCCGGGGAAGAA...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS GCA 90 bp GCAGAGTTAATAGCCTGTGATCGGTGGGGGACAGTAAGAGGCCCCTaGATTAGAAGGCTATGGGAAGGCTGGTGTCAGGAGTTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AELIACDRWGTVRGP*IRRLWEGWCQEFLS
Trigger: GCTCAGGAACTCCTGACACCAGCCTTCCCATAGCCTTCTAATGCAGGGGCCTCTTACTGTCCCCCACCGATCACAGGCTATTAACTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540455.1
CDS GCA 90 bp GAATGGCTAAGAAATTCGGCCTTTAACCCTCTGAAGCCGTCACTGTaGCGGTGGTGTTGGCCAGATCCAGAAGGATGGAGGGGAACGCAG +
Preference number: 5 (lower is better)
Translates to: EWLRNSAFNPLKPSL*RWCWPDPEGWRGTQ
Trigger: CTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGTTAAAGGCCGAATTTCTTAGCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS CCA 90 bp TGGGGGACAGTAAGAGGCCCCTGCATTAGAAGGCTATGGGAAGGCTaGTGTCAGGAGTTCCTGAGCTTTCACCCTGTCTCACAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: WGTVRGPCIRRLWEG*CQEFLSFHPVSQGR
Trigger: CCTTCCTTGTGAGACAGGGTGAAAGCTCAGGAACTCCTGACACCAGCCTTCCCATAGCCTTCTAATGCAGGGGCCTCTTACTGTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540455.1
CDS CCA 90 bp CTAAGAAATTCGGCCTTTAACCCTCTGAAGCCGTCACTGTGCCGGTaGTGTTGGCCAGATCCAGAAGGATGGAGGGGAACGCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: LRNSAFNPLKPSLCR*CWPDPEGWRGTQDA
Trigger: TGCATCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGTTAAAGGCCGAATTTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CAA 90 bp ACTGAGTCTGAACACGACGTGACTCCTCTGCACAGCATCCGGGGATGGCTTTTTCTGGCTGCGCAGGCCTaGAAGTCTCAATGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: TESEHDVTPLHSIRGWLFLAAQA*KSQCPV
Trigger: TACTGGGCATTGAGACTTCAAGGCCTGCGCAGCCAG...AAAAAGCCATCCCCGGATGCTGTGCAGAGGAGTCACGTCGTGTTCAGACTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CAA 90 bp CCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCATGCAAGATGCACTGTGCCGGTGGTGTaGGCCAGATCCAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: PTSLQICAIVSRQEHARCTVPVV*ARSRRM
Trigger: CATCCTTCTGGATCTGGCCAACACCACCGGCACAGT...GCATCTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS CCA 90 bp TGCAGGTTAAGCACCAGATCGTCTTCGCTCTCATCACTGTCAGCCTaGGTAAGTGGATCATACTCCCCTAGGTCTGGGCTCTTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: CRLSTRSSSLSSLSA*VSGSYSPRSGLFFP
Trigger: GGGGAAGAAGAGCCCAGACCTAGGGGAGTATGATCCACTTACCCAGGCTGACAGTGATGAGAGCGAAGACGATCTGGTGCTTAACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 90 bp CAGATTCCCAACTCCAACGATGTTGTACTTCACAGGTCGACCCACTaGATTTCCGGTCCGGCCAGACACCAGCAGAAAGCACAGATCTGG +
Preference number: 5 (lower is better)
Translates to: QIPNSNDVVLHRSTH*ISGPARHQQKAQIW
Trigger: CCAGATCTGTGCTTTCTGCTGGTGTCTGGCCGGACCGGAAATCCAGTGGGTCGACCTGTGAAGTACAACATCGTTGGAGTTGGGAATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
CDS CCA 90 bp ACTAAGCTTGCTGACCACCAGGGCTGCTGGATGGCCTTCGGAGCTTaGCCCTGTTGTCCTGGTAACATAAAAGGCATCTTTCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: TKLADHQGCWMAFGA*PCCPGNIKGIFPEV
Trigger: GACCTCTGGAAAGATGCCTTTTATGTTACCAGGACAACAGGGCCAAGCTCCGAAGGCCATCCAGCAGCCCTGGTGGTCAGCAAGCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp GCGGCCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCATGCAAGTGCAGATATGTGCCATaGTCAGCAGACAGGAGCATG +
Preference number: 5 (lower is better)
Translates to: AAHVTADMCHCQQTGACKCRYVP*SADRSM
Trigger: CATGCTCCTGTCTGCTGACAATGGCACATATCTGCA...CTTGCATGCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS CCA 90 bp AATGGCCAGAACCACAAGGTCTCGAACACCGTCTTCATCCAAGTCTaGCAGTACCACAACTGGGGCAGCCAAGGTACCGTTGGACAAGTA +
Preference number: 5 (lower is better)
Translates to: NGQNHKVSNTVFIQV*QYHNWGSQGTVGQV
Trigger: TACTTGTCCAACGGTACCTTGGCTGCCCCAGTTGTGGTACTGCCAGACTTGGATGAAGACGGTGTTCGAGACCTTGTGGTTCTGGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS-3UTR CAA 90 bp CAGGGCTTGGGAAACTGTCAGGTATTAAGGGCCCATTCCATTCTCAGCCCTGCTGTAAGGTGTCAGATTTaGCCCCCGAAGCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: QGLGNCQVLRAHSILSPAVRCQI*PPKQHK
Trigger: CTTGTGCTGCTTCGGGGGCAAAATCTGACACCTTAC...AGCAGGGCTGAGAATGGAATGGGCCCTTAATACCTGACAGTTTCCCAAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CAA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATTCCCCACGGCCAATTTaGGGGGTGGACTCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDSPRPI*GVDSCS
Trigger: GCTACAGGAGTCCACCCCCAAAATTGGCCGTGGGGA...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp CAGCCAAATAGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCCTTCCCAAGCCTTaGCAACCATCAGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: QPNRSCCRQRLQHAFPSLCLPKP*QPSGRW
Trigger: CCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCA...AAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCTATTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp GACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGCCAACTCCAACGATGTaGTACTTCACAGGTCGACCC +
Preference number: 5 (lower is better)
Translates to: DSNMPSQAFATIREVVNEPTPTM*YFTGRP
Trigger: GGGTCGACCTGTGAAGTACAACATCGTTGGAGTTGG...CTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp GTGGCCCTCAACATCAGAGGTAGGGCATCTGGAAGTCTCAAAATGACCAAACAACTGGCTGCGCAGGCCTaGAAGTCTCAATGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: VALNIRGRASGSLKMTKQLAAQA*KSQCPV
Trigger: TACTGGGCATTGAGACTTCAAGGCCTGCGCAGCCAG...TTGTTTGGTCATTTTGAGACTTCCAGATGCCCTACCTCTGATGTTGAGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS GCA 90 bp GCTTCTCCCAAAGGACTCTTCCCATTTTTGACCCCTCCATTCTTCTaGAGGTTAAGCACCAGATCGTCTTCGCTCTCATCACTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: ASPKGLFPFLTPPFF*RLSTRSSSLSSLSA
Trigger: GGCTGACAGTGATGAGAGCGAAGACGATCTGGTGCTTAACCTGCAGAAGAATGGAGGGGTCAAAAATGGGAAGAGTCCTTTGGGAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 90 bp CATCCAAGTCTGGCAGTACCACAACTGGGGCAGCCAAGGTACCGTTaGACAAGTAGTTTGGGTTTAAAGTCCAAATGGCTTTCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: HPSLAVPQLGQPRYR*TSSLGLKSKWLSLR
Trigger: CCTCAGGGAAAGCCATTTGGACTTTAAACCCAAACTACTTGTCCAACGGTACCTTGGCTGCCCCAGTTGTGGTACTGCCAGACTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS-3UTR CAA 90 bp TCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGAAGAAGTCTTCAATGCGCTGAGCATCTaGTGTGTCCCTGTCACAAGG +
Preference number: 5 (lower is better)
Translates to: SQAFATIREVVNEDEEVFNALSI*CVPVTR
Trigger: CCTTGTGACAGGGACACACAAGATGCTCAGCGCATT...GAAGACTTCTTCGTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCCAACTCCAACGATGTaGTACTTCACAGGTCGACCC +
Preference number: 5 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHPTPTM*YFTGRP
Trigger: GGGTCGACCTGTGAAGTACAACATCGTTGGAGTTGG...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATGTAAGGTGTCAGATTTaGCCCCCGAAGCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHVRCQI*PPKQHK
Trigger: CTTGTGCTGCTTCGGGGGCAAAATCTGACACCTTAC...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACAGGATGATATCGGAATaGGGAGATGCAGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: SNMPSQAFATIREVVNEDRMISE*GDAADS
Trigger: GCTGTCAGCTGCATCTCCCAATTCCGATATCATCCT...GTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTTTCAGCCTGCCTTCCCAAGCCTTaGCAACCATCAGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SQETSTHIGQMKLPQFSACLPKP*QPSGRW
Trigger: CCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCA...GGCTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp AAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGTGGTCATATTGGCTTaGCCGGCAACCTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: KDSNMPSQAFATIREVVNVVILA*PATSGW
Trigger: CCATCCTGAGGTTGCCGGCAAAGCCAATATGACCAC...ATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TTCCAAAGCGGCCCACGTCACTGCAGATATGTGCCATTGTCAGCAGACAGGAGCTTAATTACACTGGCTTaGTGTCATCAGGGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: FQSGPRHCRYVPLSADRSLITLA*CHQGLG
Trigger: TCCCAAGCCCTGATGACACAAAGCCAGTGTAATTAA...GCTCCTGTCTGCTGACAATGGCACATATCTGCAGTGACGTGGGCCGCTTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS TCA 90 bp GTCCAAATGGCTTTCCCTGAGGAAGGACACATAGGCTGGTCACTATaGCAACTTCTTGCCTTTGGAAAAGGCAGATGCCATGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: VQMAFPEEGHIGWSL*QLLAFGKGRCHVPR
Trigger: CCTGGGAACATGGCATCTGCCTTTTCCAAAGGCAAGAAGTTGTCATAGTGACCAGCCTATGTGTCCTTCCTCAGGGAAAGCCATTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS-3UTR CAA 90 bp GAAGGAGGCTTAGGGACACATTTCACAAGAAACCAGCACCCACATTGGTCAGATCTGAAAGATGTGGCTTaGCAGCCTCTGCAACCTCAG +
Preference number: 5 (lower is better)
Translates to: EGGLGTHFTRNQHPHWSDLKDVA*QPLQPQ
Trigger: CTGAGGTTGCAGAGGCTGCAAAGCCACATCTTTCAG...ATCTGACCAATGTGGGTGCTGGTTTCTTGTGAAATGTGTCCCTAAGCCTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TTCCCAGAAAGCCTTAACATAACAGAGAACCAGGTTATGCCCGGACAGCTCAGCCTGCACTCCCGTTCCTaGACATCACAAAGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: FPESLNITENQVMPGQLSLHSRS*TSQRRE
Trigger: TTCTCTCCTTTGTGATGTCAAGGAACGGGAGTGCAG...GCTGAGCTGTCCGGGCATAACCTGGTTCTCTGTTATGTTAAGGCTTTCTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CAA 90 bp ATAACAGGAGACCAAGGAGTGATGAGGTCCTGCAAGTGGCAGTCAAGAATGGCTTTCCCTGACGTTGCATaGAATGCGCTGAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: ITGDQGVMRSCKWQSRMAFPDVA*NALSIL
Trigger: CAAGATGCTCAGCGCATTCAATGCAACGTCAGGGAA...AGCCATTCTTGACTGCCACTTGCAGGACCTCATCACTCCTTGGTCTCCTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CAA 90 bp GCCCTGCTCCTGAGAAGTCAATCTTTCGAACCCCTCAGTTCTCCAGAGATCAGCAAGCAGCACAAGGCTTaGTCTGGTTGTAATCAGAAG +
Preference number: 5 (lower is better)
Translates to: ALLLRSQSFEPLSSPEISKQHKA*SGCNQK
Trigger: CTTCTGATTACAACCAGACAAAGCCTTGTGCTGCTT...GCTGATCTCTGGAGAACTGAGGGGTTCGAAAGATTGACTTCTCAGGAGCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CAA 90 bp ATAACAGGAGACCAAGGAGTGATGAGGTCCTGCAAGTGGCAGTCAAGAATGGCTAGGATGATATCGGAATaGGGAGATGCAGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: ITGDQGVMRSCKWQSRMARMISE*GDAADS
Trigger: GCTGTCAGCTGCATCTCCCAATTCCGATATCATCCT...AGCCATTCTTGACTGCCACTTGCAGGACCTCATCACTCCTTGGTCTCCTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS CCA 90 bp GTAATCAGAAGGTTGCTGCAGTTGGAATCTGGTGCCTTCACCATCTaGAGTAGTTCAACACCATCACTGCAATTCCCCAATGGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: VIRRLLQLESGAFTI*SSSTPSLQFPNGQN
Trigger: GTTCTGGCCATTGGGGAATTGCAGTGATGGTGTTGAACTACTCCAGATGGTGAAGGCACCAGATTCCAACTGCAGCAACCTTCTGATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS-3UTR CAA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCTTCTTCCCCGGCAGCTaGAGCGCCCTGGACAGCACG +
Preference number: 5 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFFFPGS*SALDST
Trigger: CGTGCTGTCCAGGGCGCTCAAGCTGCCGGGGAAGAA...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTTTCCCTGACGTTGCATaGAATGCGCTGAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTFPDVA*NALSIL
Trigger: CAAGATGCTCAGCGCATTCAATGCAACGTCAGGGAA...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATGAGGACGAAGAAGTCTTCCCGCAGTGCGACAGCTaGTATATTTCCAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: SQAFATIREVVNEDEEVFPQCDS*YISKAK
Trigger: TTTGGCTTTGGAAATATACAAGCTGTCGCACTGCGG...GAAGACTTCTTCGTCCTCATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTAGGCAACATGCATGCTaGGATCTACTGCTACCAACC +
Preference number: 5 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTRQHAC*DLLLPT
Trigger: GGTTGGTAGCAGTAGATCCAAGCATGCATGTTGCCT...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CAA 90 bp CAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAAACCACCACCCAAGTTTaGGGTATTCAGCTGCCTATA +
Preference number: 5 (lower is better)
Translates to: QRLQHAFPSLCNHQGGGKTTTQV*GIQLPI
Trigger: TATAGGCAGCTGAATACCCAAAACTTGGGTGGTGGT...TTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CAA 90 bp TCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATGCAGGGACTTCAGTAGTGGTCATATaGGCTTTGCCGGCAACCTCA +
Preference number: 5 (lower is better)
Translates to: SHFQTIHAEFLEGINAGTSVVVI*ALPATS
Trigger: TGAGGTTGCCGGCAAAGCCAATATGACCACTACTGA...AGTCCCTGCATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TCACAAGAAACCAGCACCCACATTGGTCAGATGAAGCTTCCTCAATTTTCAGCCCACCATACCACACATTaGGGGGATGGCAAAAACGGG +
Preference number: 5 (lower is better)
Translates to: SQETSTHIGQMKLPQFSAHHTTH*GDGKNG
Trigger: CCCGTTTTTGCCATCCCCCAAATGTGTGGTATGGTG...GGCTGAAAATTGAGGAAGCTTCATCTGACCAATGTGGGTGCTGGTTTCTTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp CTTTTCTCAGCTGTGAGCTTCGGAAGGGCAGGAACTGGTGATATTTACCTGGGGTTGTGTCATCAGGGCTaGGGAAACTGTCAGGTATTA +
Preference number: 5 (lower is better)
Translates to: LFSAVSFGRAGTGDIYLGLCHQG*GNCQVL
Trigger: TAATACCTGACAGTTTCCCAAGCCCTGATGACACAA...CCCCAGGTAAATATCACCAGTTCCTGCCCTTCCGAAGCTCACAGCTGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS TCA 90 bp TCTTCTATCTGCAGAGAAGGTGGTGAGCTGTCTCGATTTTGGGCCTaGACAAAAATGTCCCGCAGTGCGACAGCTTGTATATTTCCTAGC +
Preference number: 5 (lower is better)
Translates to: SSICREGGELSRFWA*TKMSRSATACIFPS
Trigger: GCTAGGAAATATACAAGCTGTCGCACTGCGGGACATTTTTGTTCAGGCCCAAAATCGAGACAGCTCACCACCTTCTCTGCAGATAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540455.1
CDS CCA 90 bp CTGGCGTTTCTTTCATGTGACACGGAGCACGGTAACTCCAAACAATaGAGCCAGAGTCACCATCCACAACCATCATCTTTTTCATCCCAA +
Preference number: 5 (lower is better)
Translates to: LAFLSCDTEHGNSKQ*SQSHHPQPSSFSSQ
Trigger: TTGGGATGAAAAAGATGATGGTTGTGGATGGTGACTCTGGCTCCATTGTTTGGAGTTACCGTGCTCCGTGTCACATGAAAGAAACGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS-3UTR CAA 90 bp CTTTTCTCAGCTGTGAGCTTCGGAAGGGCAGGAACTGGTGATATTTACCTGGGGCGTTGGACAAGTAGTTaGGGTTTAAAGTCCAAATGG +
Preference number: 5 (lower is better)
Translates to: LFSAVSFGRAGTGDIYLGRWTSS*GLKSKW
Trigger: CCATTTGGACTTTAAACCCAAACTACTTGTCCAACG...CCCCAGGTAAATATCACCAGTTCCTGCCCTTCCGAAGCTCACAGCTGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CAA 90 bp TCCAGAGATCAGCCTTCTGAAATCCTCAGAATGGCTATGAACCTGGCAGTAATACCAACTCCAACGATGTaGTACTTCACAGGTCGACCC +
Preference number: 5 (lower is better)
Translates to: SRDQPSEILRMAMNLAVIPTPTM*YFTGRP
Trigger: GGGTCGACCTGTGAAGTACAACATCGTTGGAGTTGG...TATTACTGCCAGGTTCATAGCCATTCTGAGGATTTCAGAAGGCTGATCTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CAA 90 bp AGATCATGCTGCCGTCAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATAAGCAGCACAAGGCTTaGTCTGGTTGTAATCAGAAG +
Preference number: 5 (lower is better)
Translates to: RSCCRQRLQHAFPSLCNHKQHKA*SGCNQK
Trigger: CTTCTGATTACAACCAGACAAAGCCTTGTGCTGCTT...ATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTGACGGCAGCATGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS TCA 90 bp TCTTCTATCTGCAGAGAAGGTGGTGAGCTGTCTCGATTTTGGGCCTaGACAAAAATGTCCCGCAGTGCGACAGCTTGTATATTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: SSICREGGELSRFWA*TKMSRSATACIFPK
Trigger: CTTTGGAAATATACAAGCTGTCGCACTGCGGGACATTTTTGTTCAGGCCCAAAATCGAGACAGCTCACCACCTTCTCTGCAGATAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
CDS-3UTR CAA 90 bp CAAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAACGTTGGACAAGTAGTTaGGGTTTAAAGTCCAAATGG +
Preference number: 5 (lower is better)
Translates to: QRLQHAFPSLCNHQGGGKRWTSS*GLKSKW
Trigger: CCATTTGGACTTTAAACCCAAACTACTTGTCCAACG...TTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp AAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATAAGCAGCACAAGGCTTaGTCTGGTTGTAATCAGAAG +
Preference number: 5 (lower is better)
Translates to: KDSNMPSQAFATIREVVNKQHKA*SGCNQK
Trigger: CTTCTGATTACAACCAGACAAAGCCTTGTGCTGCTT...ATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TACAGGAAAGAAGAGATGCAGGACAAAATGGTTGCATCCTGGACTCAAGTAGCATCAGTAGTGGTCATATaGGCTTTGCCGGCAACCTCA +
Preference number: 5 (lower is better)
Translates to: YRKEEMQDKMVASWTQVASVVVI*ALPATS
Trigger: TGAGGTTGCCGGCAAAGCCAATATGACCACTACTGA...TGCTACTTGAGTCCAGGATGCAACCATTTTGTCCTGCATCTCTTCTTTCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CAA 90 bp GCTTTGTGTCATCAGGGCTTGGGAAACTGTCAGGTATTAAGGGCCCATTCCATTCGATTTATGGGATTTTaGAGGGAGGAGTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: ALCHQGLGNCQVLRAHSIRFMGF*REEFSG
Trigger: CCCAGAAAACTCCTCCCTCAAAAATCCCATAAATCG...AATGGAATGGGCCCTTAATACCTGACAGTTTCCCAAGCCCTGATGACACAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CAA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATAATGCGCTGAGCATCTaGTGTGTCCCTGTCACAAGG +
Preference number: 5 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINNALSI*CVPVTR
Trigger: CCTTGTGACAGGGACACACAAGATGCTCAGCGCATT...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TCCAGAGATCAGCCTTCTGAAATCCTCAGAATGGCTATGAACCTGGCAGTAATACCGCAGTGCGACAGCTaGTATATTTCCAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: SRDQPSEILRMAMNLAVIPQCDS*YISKAK
Trigger: TTTGGCTTTGGAAATATACAAGCTGTCGCACTGCGG...TATTACTGCCAGGTTCATAGCCATTCTGAGGATTTCAGAAGGCTGATCTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS-3UTR CAA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCCTGGCTGCGCAGGCCTaGAAGTCTCAATGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFLAAQA*KSQCPV
Trigger: TACTGGGCATTGAGACTTCAAGGCCTGCGCAGCCAG...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCACTGTGCCGGTGGTGTaGGCCAGATCCAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFTVPVV*ARSRRM
Trigger: CATCCTTCTGGATCTGGCCAACACCACCGGCACAGT...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp ATCAAGGTTATTCAAGAAGCAGTTTTCCATCCGCTAACATTGAATTTTCTGCTATCCCCACGGCCAATTTaGGGGGTGGACTCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: IKVIQEAVFHPLTLNFLLSPRPI*GVDSCS
Trigger: GCTACAGGAGTCCACCCCCAAAATTGGCCGTGGGGA...TAGCAGAAAATTCAATGTTAGCGGATGGAAAACTGCTTCTTGAATAACCTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CAA 90 bp AAAGACTCCAACATGCCTTCCCAAGCCTTTGCAACCATCAGGGAGGTGGTAAATCAGTTCTCCTCTAAGTaGAAGACAGCATGCAAACAT +
Preference number: 5 (lower is better)
Translates to: KDSNMPSQAFATIREVVNQFSSK*KTACKH
Trigger: ATGTTTGCATGCTGTCTTCAACTTAGAGGAGAACTG...ATTTACCACCTCCCTGATGGTTGCAAAGGCTTGGGAAGGCATGTTGGAGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CAA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCAGTGGTCATATTGGCTTaGCCGGCAACCTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: ICRSHYYFSVVVILALPAVVILA*PATSGW
Trigger: CCATCCTGAGGTTGCCGGCAAAGCCAATATGACCAC...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TTAAGAGATTCACATTTCCAAACGATCCACGCAGAGTTCCTAGAGGGGATTAATCACCATACCACACATTaGGGGGATGGCAAAAACGGG +
Preference number: 5 (lower is better)
Translates to: LRDSHFQTIHAEFLEGINHHTTH*GDGKNG
Trigger: CCCGTTTTTGCCATCCCCCAAATGTGTGGTATGGTG...ATTAATCCCCTCTAGGAACTCTGCGTGGATCGTTTGGAAATGTGAATCTCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp TCACCCATAACAGGAGACCAAGGAGTGATGAGGTCCTGCAAGTGGCAGTCAAGATTGTTGGAAGAAAAGTaGAATGATTCCAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: SPITGDQGVMRSCKWQSRLLEEK*NDSSVS
Trigger: GGAAACACTGGAATCATTCAACTTTTCTTCCAACAA...TCTTGACTGCCACTTGCAGGACCTCATCACTCCTTGGTCTCCTGTTATGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS TCA 90 bp GTATATTTCCAAAGCCAAACAGGATGTAGACAGCCCCATTTGTGGTaGTGTAAACCTGAGGACCAATCAGATTCCCAACTCCAACGATGT +
Preference number: 5 (lower is better)
Translates to: VYFQSQTGCRQPHLW*CKPEDQSDSQLQRC
Trigger: ACATCGTTGGAGTTGGGAATCTGATTGGTCCTCAGGTTTACATCACCACAAATGGGGCTGTCTACATCCTGTTTGGCTTTGGAAATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
CDS TCA 90 bp CAGGAGAGTAGAGAGGGTATCCACTCTGTTCACTTCTTCTGCAACTaGAGATTCCATCAGATTAGATCTCGTAGGGAGCTTCAACAAACT +
Preference number: 5 (lower is better)
Translates to: QESREGIHSVHFFCN*RFHQIRSRRELQQT
Trigger: AGTTTGTTGAAGCTCCCTACGAGATCTAATCTGATGGAATCTTCAGTTGCAGAAGAAGTGAACAGAGTGGATACCCTCTCTACTCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000541950.1
CDS TCA 90 bp GTCCAAATGGCTTTCCCTACTTATTGCCTTTCGTTTTTGTCTTACTaGGGAGGAGGAAGCAGGCAGTGTGATCCGAATCCTAAAGTATCT +
Preference number: 5 (lower is better)
Translates to: VQMAFPTYCLSFLSY*GGGSRQCDPNPKVS
Trigger: AGATACTTTAGGATTCGGATCACACTGCCTGCTTCCTCCTCCTCAGTAAGACAAAAACGAAAGGCAATAAGTAGGGAAAGCCATTTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535974.1
CDS-3UTR CAA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCACTGAAAGATGTGGCTTaGCAGCCTCTGCAACCTCAG +
Preference number: 5 (lower is better)
Translates to: ICRSHYYFSVVVILALPALKDVA*QPLQPQ
Trigger: CTGAGGTTGCAGAGGCTGCAAAGCCACATCTTTCAG...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCAGTAAGGTGTCAGATTTaGCCCCCGAAGCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: ICRSHYYFSVVVILALPAVRCQI*PPKQHK
Trigger: CTTGTGCTGCTTCGGGGGCAAAATCTGACACCTTAC...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp GACCCTTGCATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTCCCTGACGTTGCATaGAATGCGCTGAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: DPCICRSHYYFSVVVILAFPDVA*NALSIL
Trigger: CAAGATGCTCAGCGCATTCAATGCAACGTCAGGGAA...AGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAATGCAAGGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp GGACAAAATGGTTGCATCCTGGACTCAAGTAGCAGAAGAAAAAGTCCAGAAACACGTTGGACAAGTAGTTaGGGTTTAAAGTCCAAATGG +
Preference number: 5 (lower is better)
Translates to: GQNGCILDSSSRRKSPETRWTSS*GLKSKW
Trigger: CCATTTGGACTTTAAACCCAAACTACTTGTCCAACG...TGTTTCTGGACTTTTTCTTCTGCTACTTGAGTCCAGGATGCAACCATTTTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS-3UTR CAA 90 bp ATTTGTAGAAGTCATTACTATTTCTCAGTAGTGGTCATATTGGCTTTGCCGGCACCGCAGTGCGACAGCTaGTATATTTCCAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: ICRSHYYFSVVVILALPAPQCDS*YISKAK
Trigger: TTTGGCTTTGGAAATATACAAGCTGTCGCACTGCGG...TGCCGGCAAAGCCAATATGACCACTACTGAGAAATAGTAATGACTTCTACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCAGGATGATATCGGAATaGGGAGATGCAGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFRMISE*GDAADS
Trigger: GCTGTCAGCTGCATCTCCCAATTCCGATATCATCCT...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS-3UTR CAA 90 bp CTCTTCTTTAATAGGGCAATAAGGATAGCAATTCACATTCAGGGGATTAGTTTCACACAACATGTGGACTaGGTCAGAGATGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: LFFNRAIRIAIHIQGISFTQHVD*VRDGSL
Trigger: CAGTGACCCATCTCTGACCAAGTCCACATGTTGTGT...GAAACTAATCCCCTGAATGTGAATTGCTATCCTTATTGCCCTATTAAAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000197268.13
CDS CCA 72 bp AATGGAGACAGGTCCCCACCTCCCTGGGAGCCCAAGTaGCGGCTCCAGGTGCTGTGCAGATCTCTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: NGDRSPPPWEPK*RLQVLCRSLGG
Trigger: TCCTCCCAGAGATCTGCACAGCACCTGGAGCCGCCACTTGGGCTCCCAGGGAGGTGGGGACCTGTCTCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CAA 90 bp GCTTGGCCCTGTTGTCCCTCTGAAGCCGTCACTGTGCCGGTGGTGTaGGCCAGATCCAGAAGGATGGAGGGGAACGCAGGATGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: AWPCCPSEAVTVPVV*ARSRRMEGNAGCRR
Trigger: CCTCCTGCATCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGACAACAGGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS CCA 72 bp GGCCCTGTTGTCCCTCTGAAGCCGTCACTGTGCCGGTaGTGTTGGCCAGATCCAGAAGGATGGAGGGGAACG +
Preference number: 6 (lower is better)
Translates to: GPVVPLKPSLCR*CWPDPEGWRGT
Trigger: CGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGACAACAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS TCA 72 bp CCCCAAAGTCAGCAGGAAGACAGACGTGCGCACATATaGCACCAGGGAGGAGGCCGCCTTCTGTTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: PQSQQEDRRAHI*HQGGGRLLFQA
Trigger: GGCCTGGAACAGAAGGCGGCCTCCTCCCTGGTGTCATATGTGCGCACGTCTGTCTTCCTGCTGACTTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS GCA 72 bp GAGCTTGGCCCTGTTGTCCCTCTGAAGCCGTCACTGTaGCGGTGGTGTTGGCCAGATCCAGAAGGATGGAGG +
Preference number: 6 (lower is better)
Translates to: ELGPVVPLKPSL*RWCWPDPEGWR
Trigger: CCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGACAACAGGGCCAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS CCA 72 bp AGCCCAAGTGGCGGCTCCAGGTGCTGTGCAGATCTCTaGGAGGACAGGGGATCAGGAAAGCACACAGGAGCA +
Preference number: 6 (lower is better)
Translates to: SPSGGSRCCADL*EDRGSGKHTGA
Trigger: TGCTCCTGTGTGCTTTCCTGATCCCCTGTCCTCCCAGAGATCTGCACAGCACCTGGAGCCGCCACTTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 72 bp TCGGCCTTTAACCCTCTGAAGCCGTCACTGTGCCGGTaGTGTTGGCCAGATCCAGAAGGATGGAGGGGAACG +
Preference number: 6 (lower is better)
Translates to: SAFNPLKPSLCR*CWPDPEGWRGT
Trigger: CGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGTTAAAGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS CCA 72 bp GTTGTCCCTCTGAAGCCGTCACTGTGCCGGTGGTGTTaGCCAGATCCAGAAGGATGGAGGGGAACGCAGGAT +
Preference number: 6 (lower is better)
Translates to: VVPLKPSLCRWC*PDPEGWRGTQD
Trigger: ATCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS CAA 72 bp TGTTGTCCCTCTGAAGCCGTCACTGTGCCGGTGGTGTaGGCCAGATCCAGAAGGATGGAGGGGAACGCAGGA +
Preference number: 6 (lower is better)
Translates to: CCPSEAVTVPVV*ARSRRMEGNAG
Trigger: TCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS CAA 90 bp AGGTCGTTAATTCCAACCTCTGAAGCCGTCACTGTGCCGGTGGTGTaGGCCAGATCCAGAAGGATGGAGGGGAACGCAGGATGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: RSLIPTSEAVTVPVV*ARSRRMEGNAGCRR
Trigger: CCTCCTGCATCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGTTGGAATTAACGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 72 bp ACGCAGGCCATCTCCATTCACATCAGCCAATTCCAATaGAGACAGGTCCCCACCTCCCTGGGAGCCCAAGTG +
Preference number: 6 (lower is better)
Translates to: TQAISIHISQFQ*RQVPTSLGAQV
Trigger: CACTTGGGCTCCCAGGGAGGTGGGGACCTGTCTCCATTGGAATTGGCTGATGTGAATGGAGATGGCCTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 72 bp TTCCAACCTCTGAAGCCGTCACTGTGCCGGTGGTGTTaGCCAGATCCAGAAGGATGGAGGGGAACGCAGGAT +
Preference number: 6 (lower is better)
Translates to: FQPLKPSLCRWC*PDPEGWRGTQD
Trigger: ATCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 72 bp CGTAGACTAAGCTTGCTGACCACCAGGGCTGCTGGATaGCCTTCGGAGCTTGGCCCTGTTGTCCTGGTAACA +
Preference number: 6 (lower is better)
Translates to: RRLSLLTTRAAG*PSELGPVVLVT
Trigger: TGTTACCAGGACAACAGGGCCAAGCTCCGAAGGCCATCCAGCAGCCCTGGTGGTCAGCAAGCTTAGTCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CAA 72 bp ATTCCAACCTCTGAAGCCGTCACTGTGCCGGTGGTGTaGGCCAGATCCAGAAGGATGGAGGGGAACGCAGGA +
Preference number: 6 (lower is better)
Translates to: IPTSEAVTVPVV*ARSRRMEGNAG
Trigger: TCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGTTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS GCA 72 bp AGGAGTAGGCTGGCTGCGCAGGCCTTGAAGTCTCAATaGCCAGTAAGGTGTCAGATTTTGCCCCCGAAGCAG +
Preference number: 6 (lower is better)
Translates to: RSRLAAQALKSQ*PVRCQILPPKQ
Trigger: CTGCTTCGGGGGCAAAATCTGACACCTTACTGGGCATTGAGACTTCAAGGCCTGCGCAGCCAGCCTACTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS GCA 72 bp ATAGCCTGTGATCGGTGGGGGACAGTAAGAGGCCCCTaGATTAGAAGGCTATGGGAAGGCTGGTGTCAGGAG +
Preference number: 6 (lower is better)
Translates to: IACDRWGTVRGP*IRRLWEGWCQE
Trigger: CTCCTGACACCAGCCTTCCCATAGCCTTCTAATGCAGGGGCCTCTTACTGTCCCCCACCGATCACAGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540455.1
CDS CCA 72 bp TTTAACCCTCTGAAGCCGTCACTGTGCCGGTGGTGTTaGCCAGATCCAGAAGGATGGAGGGGAACGCAGGAT +
Preference number: 6 (lower is better)
Translates to: FNPLKPSLCRWC*PDPEGWRGTQD
Trigger: ATCCTGCGTTCCCCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS TCA 72 bp CCGCCCAGACTGGACAACACGGAACAAGTGGGGAGGTaGTTAAGTGGGTGCTGGACAAGAGTCTTCCCTTCA +
Preference number: 6 (lower is better)
Translates to: PPRLDNTEQVGR*LSGCWTRVFPS
Trigger: TGAAGGGAAGACTCTTGTCCAGCACCCACTTAATCACCTCCCCACTTGTTCCGTGTTGTCCAGTCTGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540455.1
CDS GCA 72 bp AGAAATTCGGCCTTTAACCCTCTGAAGCCGTCACTGTaGCGGTGGTGTTGGCCAGATCCAGAAGGATGGAGG +
Preference number: 6 (lower is better)
Translates to: RNSAFNPLKPSL*RWCWPDPEGWR
Trigger: CCTCCATCCTTCTGGATCTGGCCAACACCACCGGCACAGTGACGGCTTCAGAGGGTTAAAGGCCGAATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537625.1
CDS CCA 72 bp AGCACCAGATCGTCTTCGCTCTCATCACTGTCAGCCTaGGTAAGTGGATCATACTCCCCTAGGTCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: STRSSSLSSLSA*VSGSYSPRSGL
Trigger: GAGCCCAGACCTAGGGGAGTATGATCCACTTACCCAGGCTGACAGTGATGAGAGCGAAGACGATCTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 72 bp GACAGCCCTTCGGCCCAGAAGAGGAAGACAGACTTCTaGTCTGAAGTAACTGCTGAGGTGGCTGGCGTTTCT +
Preference number: 6 (lower is better)
Translates to: DSPSAQKRKTDF*SEVTAEVAGVS
Trigger: AGAAACGCCAGCCACCTCAGCAGTTACTTCAGACCAGAAGTCTGTCTTCCTCTTCTGGGCCGAAGGGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS CCA 72 bp GCTGACCACCAGGGCTGCTGGATGGCCTTCGGAGCTTaGCCCTGTTGTCCTGGTAACATAAAAGGCATCTTT +
Preference number: 6 (lower is better)
Translates to: ADHQGCWMAFGA*PCCPGNIKGIF
Trigger: AAAGATGCCTTTTATGTTACCAGGACAACAGGGCCAAGCTCCGAAGGCCATCCAGCAGCCCTGGTGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS TCA 72 bp AAGATGTGGCTTTGCAGCCTCTGCAACCTCAGCATCTaGGTCGGGTTCTGGCGCTTCTCCCAAAGGACTCTT +
Preference number: 6 (lower is better)
Translates to: KMWLCSLCNLSI*VGFWRFSQRTL
Trigger: AAGAGTCCTTTGGGAGAAGCGCCAGAACCCGACTCAGATGCTGAGGTTGCAGAGGCTGCAAAGCCACATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 72 bp AACCACAAGGTCTCGAACACCGTCTTCATCCAAGTCTaGCAGTACCACAACTGGGGCAGCCAAGGTACCGTT +
Preference number: 6 (lower is better)
Translates to: NHKVSNTVFIQV*QYHNWGSQGTV
Trigger: AACGGTACCTTGGCTGCCCCAGTTGTGGTACTGCCAGACTTGGATGAAGACGGTGTTCGAGACCTTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS CCA 72 bp GTAAGAGGCCCCTGCATTAGAAGGCTATGGGAAGGCTaGTGTCAGGAGTTCCTGAGCTTTCACCCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: VRGPCIRRLWEG*CQEFLSFHPVS
Trigger: TGAGACAGGGTGAAAGCTCAGGAACTCCTGACACCAGCCTTCCCATAGCCTTCTAATGCAGGGGCCTCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540455.1
CDS CCA 72 bp CAGCAAGGGAAGGCAGAGTTAATAGCCTGTGATCGGTaGGGGACAGTAAGAGGCCCCTGCATTAGAAGGCTA +
Preference number: 6 (lower is better)
Translates to: QQGKAELIACDR*GTVRGPCIRRL
Trigger: TAGCCTTCTAATGCAGGGGCCTCTTACTGTCCCCCACCGATCACAGGCTATTAACTCTGCCTTCCCTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540455.1
CDS CAA 72 bp CAGCTGGTCTTGAGACACCTACTGCACTCCCGTTCCTaGACATCACAAAGGAGAGAAGCACATCACGCAGGC +
Preference number: 6 (lower is better)
Translates to: QLVLRHLLHSRS*TSQRREAHHAG
Trigger: GCCTGCGTGATGTGCTTCTCTCCTTTGTGATGTCAAGGAACGGGAGTGCAGTAGGTGTCTCAAGACCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS TCA 72 bp TTAGAAGGCTATGGGAAGGCTGGTGTCAGGAGTTCCTaGGCTTTCACCCTGTCTCACAAGGAAGGCCTCATC +
Preference number: 6 (lower is better)
Translates to: LEGYGKAGVRSS*AFTLSHKEGLI
Trigger: GATGAGGCCTTCCTTGTGAGACAGGGTGAAAGCTCAGGAACTCCTGACACCAGCCTTCCCATAGCCTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540455.1
CDS CCA 72 bp AACACCGTCTTCATCCAAGTCTGGCAGTACCACAACTaGGGCAGCCAAGGTACCGTTGGACAAGTAGTTTGG +
Preference number: 6 (lower is better)
Translates to: NTVFIQVWQYHN*GSQGTVGQVVW
Trigger: CCAAACTACTTGTCCAACGGTACCTTGGCTGCCCCAGTTGTGGTACTGCCAGACTTGGATGAAGACGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS CAA 72 bp GCTTTCCCTGACGTTGCATTGAATGCGCTGAGCATCTaGTGTGTCCCTGTCACAAGGCAGATGGTTTCAGCC +
Preference number: 6 (lower is better)
Translates to: AFPDVALNALSI*CVPVTRQMVSA
Trigger: GGCTGAAACCATCTGCCTTGTGACAGGGACACACAAGATGCTCAGCGCATTCAATGCAACGTCAGGGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CAA 90 bp TCTGAGTCGGGTTCTGGCGCTTCTCCCAAAGGACTCTTCCCATTTTaGACCCCTCCATTCTTCTGCAGGTTAAGCACCAGATCGTCTTCG +
Preference number: 6 (lower is better)
Translates to: SESGSGASPKGLFPF*TPPFFCRLSTRSSS
Trigger: CGAAGACGATCTGGTGCTTAACCTGCAGAAGAATGGAGGGGTCAAAAATGGGAAGAGTCCTTTGGGAGAAGCGCCAGAACCCGACTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CAA 90 bp GCTGCGCAGGCCTTGAAGTCTCAATGCCCAGTAAGGTGTCAGATTTaGCCCCCGAAGCAGCACAAGGCTTTGTCTGGTTGTAATCAGAAG +
Preference number: 6 (lower is better)
Translates to: AAQALKSQCPVRCQI*PPKQHKALSGCNQK
Trigger: CTTCTGATTACAACCAGACAAAGCCTTGTGCTGCTTCGGGGGCAAAATCTGACACCTTACTGGGCATTGAGACTTCAAGGCCTGCGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS CAA 90 bp TGCCCCCGAAGCAGCACAAGGCTTTGTCTGGTTGTAATCAGAAGGTaGCTGCAGTTGGAATCTGGTGCCTTCACCATCTGGAGTAGTTCA +
Preference number: 6 (lower is better)
Translates to: CPRSSTRLCLVVIRR*LQLESGAFTIWSSS
Trigger: TGAACTACTCCAGATGGTGAAGGCACCAGATTCCAACTGCAGCAACCTTCTGATTACAACCAGACAAAGCCTTGTGCTGCTTCGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS CAA 90 bp TGCCCAGTAAGGTGTCAGATTTTGCCCCCGAAGCAGCACAAGGCTTaGTCTGGTTGTAATCAGAAGGTTGCTGCAGTTGGAATCTGGTGC +
Preference number: 6 (lower is better)
Translates to: CPVRCQILPPKQHKA*SGCNQKVAAVGIWC
Trigger: GCACCAGATTCCAACTGCAGCAACCTTCTGATTACAACCAGACAAAGCCTTGTGCTGCTTCGGGGGCAAAATCTGACACCTTACTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS CAA 72 bp GCCTTGAAGTCTCAATGCCCAGTAAGGTGTCAGATTTaGCCCCCGAAGCAGCACAAGGCTTTGTCTGGTTGT +
Preference number: 6 (lower is better)
Translates to: ALKSQCPVRCQI*PPKQHKALSGC
Trigger: ACAACCAGACAAAGCCTTGTGCTGCTTCGGGGGCAAAATCTGACACCTTACTGGGCATTGAGACTTCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS TCA 72 bp TGCAGAGAAGGTGGTGAGCTGTCTCGATTTTGGGCCTaGACAAAAATGTCCCGCAGTGCGACAGCTTGTATA +
Preference number: 6 (lower is better)
Translates to: CREGGELSRFWA*TKMSRSATACI
Trigger: TATACAAGCTGTCGCACTGCGGGACATTTTTGTTCAGGCCCAAAATCGAGACAGCTCACCACCTTCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000540455.1
CDS CCA 72 bp CTGGCAGTACCACAACTGGGGCAGCCAAGGTACCGTTaGACAAGTAGTTTGGGTTTAAAGTCCAAATGGCTT +
Preference number: 6 (lower is better)
Translates to: LAVPQLGQPRYR*TSSLGLKSKWL
Trigger: AAGCCATTTGGACTTTAAACCCAAACTACTTGTCCAACGGTACCTTGGCTGCCCCAGTTGTGGTACTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS CAA 72 bp AGCAGCACAAGGCTTTGTCTGGTTGTAATCAGAAGGTaGCTGCAGTTGGAATCTGGTGCCTTCACCATCTGG +
Preference number: 6 (lower is better)
Translates to: SSTRLCLVVIRR*LQLESGAFTIW
Trigger: CCAGATGGTGAAGGCACCAGATTCCAACTGCAGCAACCTTCTGATTACAACCAGACAAAGCCTTGTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS CAA 72 bp AGGTGTCAGATTTTGCCCCCGAAGCAGCACAAGGCTTaGTCTGGTTGTAATCAGAAGGTTGCTGCAGTTGGA +
Preference number: 6 (lower is better)
Translates to: RCQILPPKQHKA*SGCNQKVAAVG
Trigger: TCCAACTGCAGCAACCTTCTGATTACAACCAGACAAAGCCTTGTGCTGCTTCGGGGGCAAAATCTGACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS CAA 72 bp CAACTGGGGCAGCCAAGGTACCGTTGGACAAGTAGTTaGGGTTTAAAGTCCAAATGGCTTTCCCTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: QLGQPRYRWTSS*GLKSKWLSLRK
Trigger: CTTCCTCAGGGAAAGCCATTTGGACTTTAAACCCAAACTACTTGTCCAACGGTACCTTGGCTGCCCCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS CCA 72 bp AGGTTGCTGCAGTTGGAATCTGGTGCCTTCACCATCTaGAGTAGTTCAACACCATCACTGCAATTCCCCAAT +
Preference number: 6 (lower is better)
Translates to: RLLQLESGAFTI*SSSTPSLQFPN
Trigger: ATTGGGGAATTGCAGTGATGGTGTTGAACTACTCCAGATGGTGAAGGCACCAGATTCCAACTGCAGCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541950.1
CDS CAA 90 bp AGCAGCACAAGGCTTTGTCTGGTTGTAATCAGAAGGTTGCTGCAGTaGGAATCTGGTGCCTTCACCATCTGGAGTAGTTCAACACCATCA +
Preference number: 6 (lower is better)
Translates to: SSTRLCLVVIRRLLQ*ESGAFTIWSSSTPS
Trigger: TGATGGTGTTGAACTACTCCAGATGGTGAAGGCACCAGATTCCAACTGCAGCAACCTTCTGATTACAACCAGACAAAGCCTTGTGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS TCA 72 bp CAAAGCCAAACAGGATGTAGACAGCCCCATTTGTGGTaGTGTAAACCTGAGGACCAATCAGATTCCCAACTC +
Preference number: 6 (lower is better)
Translates to: QSQTGCRQPHLW*CKPEDQSDSQL
Trigger: GAGTTGGGAATCTGATTGGTCCTCAGGTTTACATCACCACAAATGGGGCTGTCTACATCCTGTTTGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
CDS GCA 72 bp AAAGGACTCTTCCCATTTTTGACCCCTCCATTCTTCTaGAGGTTAAGCACCAGATCGTCTTCGCTCTCATCA +
Preference number: 6 (lower is better)
Translates to: KGLFPFLTPPFF*RLSTRSSSLSS
Trigger: TGATGAGAGCGAAGACGATCTGGTGCTTAACCTGCAGAAGAATGGAGGGGTCAAAAATGGGAAGAGTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000197268.13
ENST00000416494.6
CDS CCA 72 bp CTTTCATGTGACACGGAGCACGGTAACTCCAAACAATaGAGCCAGAGTCACCATCCACAACCATCATCTTTT +
Preference number: 6 (lower is better)
Translates to: LSCDTEHGNSKQ*SQSHHPQPSSF
Trigger: AAAAGATGATGGTTGTGGATGGTGACTCTGGCTCCATTGTTTGGAGTTACCGTGCTCCGTGTCACATGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000537625.1
ENST00000541950.1
CDS TCA 72 bp AGAGAGGGTATCCACTCTGTTCACTTCTTCTGCAACTaGAGATTCCATCAGATTAGATCTCGTAGGGAGCTT +
Preference number: 6 (lower is better)
Translates to: REGIHSVHFFCN*RFHQIRSRREL
Trigger: AAGCTCCCTACGAGATCTAATCTGATGGAATCTTCAGTTGCAGAAGAAGTGAACAGAGTGGATACCCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000197268.13
ENST00000416494.6
ENST00000541950.1
CDS TCA 72 bp ATCCTTTCCAACAAAGAAGGGCTCACTTGCCTGGGGTaGGGGAACTGTCTGTTAGAGATTATAACAACTATT +
Preference number: 6 (lower is better)
Translates to: ILSNKEGLTCLG*GNCLLEIITTI
Trigger: AATAGTTGTTATAATCTCTAACAGACAGTTCCCTCACCCCAGGCAAGTGAGCCCTTCTTTGTTGGAAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535974.1