Pregenerated sensors for FAM230J (Homo sapiens)

Ensembl gene IDs: ENSG00000274044

Ensembl transcript IDs: ENST00000618517.4, ENST00000619172.5

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGCTCTGGAGGAGAGCCTGTTCCCTGTCTCTCAGCTTCTGCCGGTTaGCAGCAAGTGTTGCCGTTCATTCACTCCAGCCACTGCCTCCAT	+
Preference number: 5 (lower is better) Translates to: GSGGEPVPCLSASAG*QQVLPFIHSSHCLH Trigger: ATGGAGGCAGTGGCTGGAGTGAATGAACGGCAACACTTGCTGGCAACCGGCAGAAGCTGAGAGACAGGGAACAGGCTCTCCTCCAGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618517.4 ENST00000619172.5
CDS GCA 90 bp	TCCTGGAGGCTCTGGAGGAGAGCCTGTTCCCTGTCTCTCAGCTTCTaGCGGTTGCCAGCAAGTGTTGCCGTTCATTCACTCCAGCCACTG	+
Preference number: 5 (lower is better) Translates to: SWRLWRRACSLSLSF*RLPASVAVHSLQPL Trigger: CAGTGGCTGGAGTGAATGAACGGCAACACTTGCTGGCAACCGGCAGAAGCTGAGAGACAGGGAACAGGCTCTCCTCCAGAGCCTCCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618517.4 ENST00000619172.5
CDS GCA 90 bp	CACATTGTGCAGGTTAGTTACATATGTATACATGTGCCACGCTGGTaGGCTGCACCCACTAACTCATCATCTAGCATTAGGTATATCTCC	+
Preference number: 5 (lower is better) Translates to: HIVQVSYICIHVPRW*AAPTNSSSSIRYIS Trigger: GGAGATATACCTAATGCTAGATGATGAGTTAGTGGGTGCAGCGCACCAGCGTGGCACATGTATACATATGTAACTAACCTGCACAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619172.5
CDS CCA 90 bp	GTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCACGCTaGTGCGCTGCACCCACTAACTCATCATCTAGCATTAGGTATATC	+
Preference number: 5 (lower is better) Translates to: VHIVQVSYICIHVPR*CAAPTNSSSSIRYI Trigger: GATATACCTAATGCTAGATGATGAGTTAGTGGGTGCAGCGCACCAGCGTGGCACATGTATACATATGTAACTAACCTGCACAATGTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619172.5
CDS CAA 90 bp	AGGCTCTGGAGGAGAGCCTGTTCCCTGTCTCTCAGCTTCTGCCGGTaGCCAGCAAGTGTTGCCGTTCATTCACTCCAGCCACTGCCTCCA	+
Preference number: 6 (lower is better) Translates to: RLWRRACSLSLSFCR*PASVAVHSLQPLPP Trigger: TGGAGGCAGTGGCTGGAGTGAATGAACGGCAACACTTGCTGGCAACCGGCAGAAGCTGAGAGACAGGGAACAGGCTCTCCTCCAGAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618517.4 ENST00000619172.5
CDS CCA 72 bp	GTGCAGGTTAGTTACATATGTATACATGTGCCACGCTaGTGCGCTGCACCCACTAACTCATCATCTAGCATT	+
Preference number: 6 (lower is better) Translates to: VQVSYICIHVPR*CAAPTNSSSSI Trigger: AATGCTAGATGATGAGTTAGTGGGTGCAGCGCACCAGCGTGGCACATGTATACATATGTAACTAACCTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619172.5
CDS TCA 72 bp	TCAGGGAAAATGAAACCACAATGGTTCAATCTGCTCTaGCCTTTGAAAAACTCAGCACAGGTAGTGGCACTT	+
Preference number: 6 (lower is better) Translates to: SGKMKPQWFNLL*PLKNSAQVVAL Trigger: AAGTGCCACTACCTGTGCTGAGTTTTTCAAAGGTCAGAGCAGATTGAACCATTGTGGTTTCATTTTCCCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000618517.4 ENST00000619172.5

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