Pregenerated sensors for FAM230I (Homo sapiens)

Ensembl gene IDs: ENSG00000178248

Ensembl transcript IDs: ENST00000320372.9, ENST00000610688.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CTCCAGGAGGTTTCTTGGGTGTGTCCCGCAGCTGCTCCGTCAATGTaGCAGCCCCGTCTTGCTCATCTGGGGGCATGTTTCAAACCCGAG	+
Preference number: 5 (lower is better) Translates to: LQEVSWVCPAAAPSM*QPRLAHLGACFKPE Trigger: CTCGGGTTTGAAACATGCCCCCAGATGAGCAAGACGGGGCTGCCACATTGACGGAGCAGCTGCGGGACACACCCAAGAAACCTCCTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000320372.9 ENST00000610688.2
CDS GCA 90 bp	TTGGGTGTGTCCCGCAGCTGCTCCGTCAATGTGGCAGCCCCGTCTTaGTCATCTGGGGGCATGTTTCAAACCCGAGAAGAAATCATAAGC	+
Preference number: 5 (lower is better) Translates to: LGVSRSCSVNVAAPS*SSGGMFQTREEIIS Trigger: GCTTATGATTTCTTCTCGGGTTTGAAACATGCCCCCAGATGAGCAAGACGGGGCTGCCACATTGACGGAGCAGCTGCGGGACACACCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000320372.9 ENST00000610688.2
CDS TCA 90 bp	TCCTCAGAGGCTTCTTGTGGCTGTATCTTCTTTCTCCAGAAGCCATaGTGCCTCCAATGCTGGTTGGTGTACAGGCTGTATCTTCTCAAA	+
Preference number: 5 (lower is better) Translates to: SSEASCGCIFFLQKP*CLQCWLVYRLYLLK Trigger: TTTGAGAAGATACAGCCTGTACACCAACCAGCATTGGAGGCATCATGGCTTCTGGAGAAAGAAGATACAGCCACAAGAAGCCTCTGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320372.9 ENST00000610688.2
CDS CCA 72 bp	GTTTCTTGGGTGTGTCCCGCAGCTGCTCCGTCAATGTaGCAGCCCCGTCTTGCTCATCTGGGGGCATGTTTC	+
Preference number: 6 (lower is better) Translates to: VSWVCPAAAPSM*QPRLAHLGACF Trigger: GAAACATGCCCCCAGATGAGCAAGACGGGGCTGCCACATTGACGGAGCAGCTGCGGGACACACCCAAGAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000320372.9 ENST00000610688.2
CDS CAA 72 bp	GTCCCGCAGCTGCTCCGTCAATGTGGCAGCCCCGTCTaGCTCATCTGGGGGCATGTTTCAAACCCGAGAAGA	+
Preference number: 6 (lower is better) Translates to: VPQLLRQCGSPV*LIWGHVSNPRR Trigger: TCTTCTCGGGTTTGAAACATGCCCCCAGATGAGCAAGACGGGGCTGCCACATTGACGGAGCAGCTGCGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000320372.9 ENST00000610688.2
CDS GCA 72 bp	TCCCGCAGCTGCTCCGTCAATGTGGCAGCCCCGTCTTaGTCATCTGGGGGCATGTTTCAAACCCGAGAAGAA	+
Preference number: 6 (lower is better) Translates to: SRSCSVNVAAPS*SSGGMFQTREE Trigger: TTCTTCTCGGGTTTGAAACATGCCCCCAGATGAGCAAGACGGGGCTGCCACATTGACGGAGCAGCTGCGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000320372.9 ENST00000610688.2
CDS GCA 72 bp	TGTTCTCCAGGAGGTTTCTTGGGTGTGTCCCGCAGCTaGTCCGTCAATGTGGCAGCCCCGTCTTGCTCATCT	+
Preference number: 6 (lower is better) Translates to: CSPGGFLGVSRS*SVNVAAPSCSS Trigger: AGATGAGCAAGACGGGGCTGCCACATTGACGGAGCAGCTGCGGGACACACCCAAGAAACCTCCTGGAGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000320372.9 ENST00000610688.2
CDS CAA 90 bp	CTTGGGTGTGTCCCGCAGCTGCTCCGTCAATGTGGCAGCCCCGTCTaGCTCATCTGGGGGCATGTTTCAAACCCGAGAAGAAATCATAAG	+
Preference number: 6 (lower is better) Translates to: LGCVPQLLRQCGSPV*LIWGHVSNPRRNHK Trigger: CTTATGATTTCTTCTCGGGTTTGAAACATGCCCCCAGATGAGCAAGACGGGGCTGCCACATTGACGGAGCAGCTGCGGGACACACCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000320372.9 ENST00000610688.2
CDS TCA 72 bp	GCTTCTTGTGGCTGTATCTTCTTTCTCCAGAAGCCATaGTGCCTCCAATGCTGGTTGGTGTACAGGCTGTAT	+
Preference number: 6 (lower is better) Translates to: ASCGCIFFLQKP*CLQCWLVYRLY Trigger: ATACAGCCTGTACACCAACCAGCATTGGAGGCATCATGGCTTCTGGAGAAAGAAGATACAGCCACAAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320372.9 ENST00000610688.2