Pregenerated sensors for FAM230H (Homo sapiens)
Ensembl gene IDs: ENSG00000206142Ensembl transcript IDs: ENST00000416615.5, ENST00000436681.5, ENST00000447720.5
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTCTCCCAGAAGCCCACATTCAAGGTGGCCAAAGGCCTGGCTCCTaGAGGCTCTGGAGGAGAGCCTGTTCCCTGTCTCTCAGCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: GLPEAHIQGGQRPGS*RLWRRACSLSLSFC Trigger: GCAGAAGCTGAGAGACAGGGAACAGGCTCTCCTCCAGAGCCTCCAGGAGCCAGGCCTTTGGCCACCTTGAATGTGGGCTTCTGGGAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416615.5 ENST00000436681.5 ENST00000447720.5 |
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| CDS CCA 90 bp | AACGCATGGTCTCCCAGAAGCCCACATTCAAGGTGGCCAAAGGCCTaGCTCCTGGAGGCTCTGGAGGAGAGCCTGTTCCCTGTCTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: NAWSPRSPHSRWPKA*LLEALEESLFPVSQ Trigger: CTGAGAGACAGGGAACAGGCTCTCCTCCAGAGCCTCCAGGAGCCAGGCCTTTGGCCACCTTGAATGTGGGCTTCTGGGAGACCATGCGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416615.5 ENST00000436681.5 ENST00000447720.5 |
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| CDS CCA 72 bp | GAAGCCCACATTCAAGGTGGCCAAAGGCCTGGCTCCTaGAGGCTCTGGAGGAGAGCCTGTTCCCTGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: EAHIQGGQRPGS*RLWRRACSLSL Trigger: GAGAGACAGGGAACAGGCTCTCCTCCAGAGCCTCCAGGAGCCAGGCCTTTGGCCACCTTGAATGTGGGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416615.5 ENST00000436681.5 ENST00000447720.5 |
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| CDS CCA 72 bp | TCTCCCAGAAGCCCACATTCAAGGTGGCCAAAGGCCTaGCTCCTGGAGGCTCTGGAGGAGAGCCTGTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SPRSPHSRWPKA*LLEALEESLFP Trigger: AGGGAACAGGCTCTCCTCCAGAGCCTCCAGGAGCCAGGCCTTTGGCCACCTTGAATGTGGGCTTCTGGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416615.5 ENST00000436681.5 ENST00000447720.5 |
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| CDS CCA 72 bp | AGAAACGCATGGTCTCCCAGAAGCCCACATTCAAGGTaGCCAAAGGCCTGGCTCCTGGAGGCTCTGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RNAWSPRSPHSR*PKAWLLEALEE Trigger: CTCCTCCAGAGCCTCCAGGAGCCAGGCCTTTGGCCACCTTGAATGTGGGCTTCTGGGAGACCATGCGTTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416615.5 ENST00000436681.5 ENST00000447720.5 |
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| CDS CAA 72 bp | CCCTGTCTCTCAGCTTCTGCCGGTTGCCAGCAAGTGTaGCCGTTCATTCACTCCAGCCACTGCCTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: PCLSASAGCQQV*PFIHSSHCLHL Trigger: CAGATGGAGGCAGTGGCTGGAGTGAATGAACGGCAACACTTGCTGGCAACCGGCAGAAGCTGAGAGACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416615.5 ENST00000436681.5 ENST00000447720.5 |
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| CDS GCA 72 bp | CTCTGGAGGAGAGCCTGTTCCCTGTCTCTCAGCTTCTaGCGGTTGCCAGCAAGTGTTGCCGTTCATTCACTC | + |
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Preference number: 6 (lower is better) Translates to: LWRRACSLSLSF*RLPASVAVHSL Trigger: GAGTGAATGAACGGCAACACTTGCTGGCAACCGGCAGAAGCTGAGAGACAGGGAACAGGCTCTCCTCCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416615.5 ENST00000436681.5 ENST00000447720.5 |
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| CDS CAA 72 bp | AGGAGAGCCTGTTCCCTGTCTCTCAGCTTCTGCCGGTaGCCAGCAAGTGTTGCCGTTCATTCACTCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: RRACSLSLSFCR*PASVAVHSLQP Trigger: TGGCTGGAGTGAATGAACGGCAACACTTGCTGGCAACCGGCAGAAGCTGAGAGACAGGGAACAGGCTCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416615.5 ENST00000436681.5 ENST00000447720.5 |
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| CDS CCA 72 bp | ACTGCCAGAGACTGGGCTGCTTATAACAGAAACGCATaGTCTCCCAGAAGCCCACATTCAAGGTGGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: TARDWAAYNRNA*SPRSPHSRWPK Trigger: CTTTGGCCACCTTGAATGTGGGCTTCTGGGAGACCATGCGTTTCTGTTATAAGCAGCCCAGTCTCTGGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416615.5 ENST00000436681.5 ENST00000447720.5 |
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| CDS GCA 72 bp | ATTGTGCAGGTTAGTTACATATGTATACATGTGCCGTaGTGGTGCGCTGCACCCACTAACTCATCATCTAGC | + |
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Preference number: 6 (lower is better) Translates to: IVQVSYICIHVP*WCAAPTNSSSS Trigger: GCTAGATGATGAGTTAGTGGGTGCAGCGCACCAGCACGGCACATGTATACATATGTAACTAACCTGCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436681.5 ENST00000447720.5 |
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| CDS GCA 72 bp | TGCACATTGTGCAGGTTAGTTACATATGTATACATGTaGCGTGCTGGTGCGCTGCACCCACTAACTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: CTLCRLVTYVYM*RAGALHPLTHH Trigger: ATGATGAGTTAGTGGGTGCAGCGCACCAGCACGGCACATGTATACATATGTAACTAACCTGCACAATGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436681.5 ENST00000447720.5 |
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| CDS CCA 72 bp | GTGCAGGTTAGTTACATATGTATACATGTGCCGTGCTaGTGCGCTGCACCCACTAACTCATCATCTAGCATT | + |
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Preference number: 6 (lower is better) Translates to: VQVSYICIHVPC*CAAPTNSSSSI Trigger: AATGCTAGATGATGAGTTAGTGGGTGCAGCGCACCAGCACGGCACATGTATACATATGTAACTAACCTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436681.5 ENST00000447720.5 |
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