RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM228B (Homo sapiens)

Ensembl gene IDs: ENSG00000219626

Ensembl transcript IDs: ENST00000460686.1, ENST00000461972.5, ENST00000469867.1, ENST00000486967.5, ENST00000611127.4, ENST00000611138.1, ENST00000611917.1, ENST00000613899.4, ENST00000615135.4, ENST00000615575.5

Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTTGGTTGCTaGAACCTCCCTCTTCTTTCTTATAGCTCCAGCTTCAGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: YPFTNQGSGCVLLGC*NLPLLSYSSSFSSP
Trigger: GGGGCTGCTGAAGCTGGAGCTATAAGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
3UTR TCA 90 bp CTTCACCCTGATTCCTGTGAGCAGATGACTTCCTCTGAAGCAGCCTaGTTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCT +
Preference number: 1 (lower is better)
Translates to: LHPDSCEQMTSSEAA*FCVSFHQSRIRVCA
Trigger: AGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGAAGTCATCTGCTCACAGGAATCAGGGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
3UTR GCA 90 bp AGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTaGTCCTTGGTTGCTGAAACCTCCCTCTTCTTTCTTATAGCTCCA +
Preference number: 1 (lower is better)
Translates to: SLILCILSPIKDQGV*SLVAETSLFFLIAP
Trigger: TGGAGCTATAAGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
3UTR-3UTR TCA 90 bp AACCTCCCTCTTCTTTCTTATAGCTCCAGCTTCAGCAGCCCCAAACGCGGGGAGCCTCCCGTTCCTGGCTaGGGCTCAAGGAAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: NLPLLSYSSSFSSPKRGEPPVPG*GSRKKN
Trigger: ATTTTTCTTCCTTGAGCCTCAGCCAGGAACGGGAGG...CTCCCCGCGTTTGGGGCTGCTGAAGCTGGAGCTATAAGAAAGAAGAGGGAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615135.4
3UTR-3UTR TCA 90 bp AGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTTCCTCTGAAAGACAGGACAATTCTTaGGTGCCGTCCTTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: SAVLGLHPDSCEQMTSSERQDNS*VPSLAF
Trigger: GAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCT...TTCAGAGGAAGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
3UTR-3UTR TCA 90 bp CAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTAGACAGGACAATTCTTaGGTGCCGTCCTTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: QFLSAVLGLHPDSCEQMTRQDNS*VPSLAF
Trigger: GAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCT...AGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
3UTR-3UTR GCA 90 bp CAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTAGGACAATTCTTGAGTaGCGTCCTTGGCCTTCACCC +
Preference number: 2 (lower is better)
Translates to: QFLSAVLGLHPDSCEQMTRTILE*RPWPSP
Trigger: GGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCT...AGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
3UTR-3UTR CCA 90 bp CCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGAGGGAGACCCATCCTaGTCTTCCTCCCGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: PLKQPDFVYPFTNQGSGCEGDPS*SSSRSW
Trigger: CCAGGAACGGGAGGAAGACCAGGATGGGTCTCCCTC...ACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615135.4
3UTR-3UTR TCA 90 bp CAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTTCCTCTGAAGCAGCCTaGTTTTGTGTATCCTTTCAC +
Preference number: 2 (lower is better)
Translates to: QFLSAVLGLHPDSCEQMTSSEAA*FCVSFH
Trigger: GTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGA...AGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
3UTR-3UTR CCA 90 bp CCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTTCTTCCTCCCGTTCCTaGCTGAGGCTCAAGGAAGAA +
Preference number: 2 (lower is better)
Translates to: PLKQPDFVYPFTNQGSGCSSSRS*LRLKEE
Trigger: TTCTTCCTTGAGCCTCAGCCAGGAACGGGAGGAAGA...ACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615135.4
3UTR-3UTR TCA 90 bp TTTTTAGAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTCCTCTGAAGCAGCCTaGTTTTGTGTATCCTTTCAC +
Preference number: 2 (lower is better)
Translates to: FLETGQFLSAVLGLHPDSSSEAA*FCVSFH
Trigger: GTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGA...GGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
3UTR-3UTR TCA 90 bp CTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGTCCTCTGAAGCAGCCTaGTTTTGTGTATCCTTTCAC +
Preference number: 2 (lower is better)
Translates to: LKQPDFVYPFTNQGSGCVSSEAA*FCVSFH
Trigger: GTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGA...CACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
3UTR CAA 90 bp ATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTaGGTTGCTGAAACCTCCCTCTTCTTTCTTATAGCTCCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: ILCILSPIKDQGVCS*VAETSLFFLIAPAS
Trigger: TGAAGCTGGAGCTATAAGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
3UTR-3UTR GCA 90 bp TTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCAAGGACAATTCTTGAGTaGCGTCCTTGGCCTTCACCC +
Preference number: 2 (lower is better)
Translates to: LVRSAIFLNFWGKYMVLPRTILE*RPWPSP
Trigger: GGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCT...TGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
3UTR-3UTR CCA 90 bp TGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATAGGGTGTGTGCTCCTTaGTTGCTGAAACCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: WFVQQYFLTSGENTWYCHRVCAP*LLKPPS
Trigger: AGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCT...ATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
3UTR-3UTR TCA 90 bp TATTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCAGACAGGACAATTCTTaGGTGCCGTCCTTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: YWFVQQYFLTSGENTWYCRQDNS*VPSLAF
Trigger: GAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCT...GCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
3UTR-3UTR TCA 90 bp TTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCAGACAGGACAATTCTTaGGTGCCGTCCTTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: FVQQYFLTSGENTWYCHFRQDNS*VPSLAF
Trigger: GAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCT...GAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
3UTR-3UTR TCA 90 bp TTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCGCAGATGACTTCCTCTaGAGCAGCCTGATTTTGTGT +
Preference number: 2 (lower is better)
Translates to: FVQQYFLTSGENTWYCHFADDFL*SSLILC
Trigger: ACACAAAATCAGGCTGCTTCAGAGGAAGTCATCTGC...GAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
3UTR-3UTR TCA 90 bp GGGGAAAATACATGGTATTGCCATTTCTTAATTATCACAGACACTGAACTCAAATCCTCTGAAGCAGCCTaGTTTTGTGTATCCTTTCAC +
Preference number: 2 (lower is better)
Translates to: GENTWYCHFLIITDTELKSSEAA*FCVSFH
Trigger: GTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGA...TTTGAGTTCAGTGTCTGTGATAATTAAGAAATGGCAATACCATGTATTTTCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
3UTR CCA 72 bp CAAACGCGGGGAGGGAGACCGTGGAGGGCTCCCATCTaGGACCTGAGGATCCTTGGAGATCACGTAGGGGAC +
Preference number: 3 (lower is better)
Translates to: QTRGGRPWRAPI*DLRILGDHVGD
Trigger: GTCCCCTACGTGATCTCCAAGGATCCTCAGGTCCCAGATGGGAGCCCTCCACGGTCTCCCTCCCCGCGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611917.1
3UTR CCA 72 bp TTCAGCAGCCCCAAACGCGGGGAGGGAGACCCATCCTaGTCTTCCTCCCGTTCCTGGCTGAGGCTCAAGGAA +
Preference number: 3 (lower is better)
Translates to: FSSPKRGEGDPS*SSSRSWLRLKE
Trigger: TTCCTTGAGCCTCAGCCAGGAACGGGAGGAAGACCAGGATGGGTCTCCCTCCCCGCGTTTGGGGCTGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615135.4
3UTR-3UTR CAA 90 bp CTTCCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGGAGACAGGACAATTCTaGAGTGCCGTCCTTGGCCTT +
Preference number: 3 (lower is better)
Translates to: LPLKQPDFVYPFTNQGSGETGQF*SAVLGL
Trigger: AAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC...CCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
3UTR-3UTR CAA 90 bp AAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCGAGACAGGACAATTCTaGAGTGCCGTCCTTGGCCTT +
Preference number: 3 (lower is better)
Translates to: KQPDFVYPFTNQGSGCVLETGQF*SAVLGL
Trigger: AAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC...GAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
3UTR-3UTR CAA 90 bp CCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGTGTGCTCCTTGGTaGCTGAAACCTCCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: PLKQPDFVYPFTNQGSGCVCAPW*LKPPSS
Trigger: AGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACAC...ACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
3UTR TCA 72 bp GATTCCTGTGAGCAGATGACTTCCTCTGAAGCAGCCTaGTTTTGTGTATCCTTTCACCAATCAAGGATCAGG +
Preference number: 3 (lower is better)
Translates to: DSCEQMTSSEAA*FCVSFHQSRIR
Trigger: CCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGAAGTCATCTGCTCACAGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
3UTR-3UTR CAA 90 bp GGGGAAAATACATGGTATTGCCATTTCTTAATTATCACAGACACTGAACTCAAACAGGGTGTGTGCTCCTaGGTTGCTGAAACCTCCCTC +
Preference number: 3 (lower is better)
Translates to: GENTWYCHFLIITDTELKQGVCS*VAETSL
Trigger: GAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTG...TTTGAGTTCAGTGTCTGTGATAATTAAGAAATGGCAATACCATGTATTTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
3UTR-3UTR CAA 90 bp GGGGAAAATACATGGTATTGCCATTTCTTAATTATCACAGACACTGAACTCAAAGAGACAGGACAATTCTaGAGTGCCGTCCTTGGCCTT +
Preference number: 3 (lower is better)
Translates to: GENTWYCHFLIITDTELKETGQF*SAVLGL
Trigger: AAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC...TTTGAGTTCAGTGTCTGTGATAATTAAGAAATGGCAATACCATGTATTTTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
3UTR-3UTR CAA 90 bp GTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTGTGTGTGCTCCTTGGTaGCTGAAACCTCCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: VRSAIFLNFWGKYMVLPFVCAPW*LKPPSS
Trigger: AGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACAC...AAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp CTCCAGCTTCAGCAGCCCCAAACGCGGGGAGGGAGACCGTGGAGGGCTCCCATCCGGGGAGGGAGACCGTaGAGGGCTCCCATCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LQLQQPQTRGGRPWRAPIRGGRP*RAPIWD
Trigger: GTCCCAGATGGGAGCCCTCCACGGTCTCCCTCCCCG...GATGGGAGCCCTCCACGGTCTCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611917.1
CDS-3UTR CCA 90 bp CCAGCTTCAGCAGCCCCAAACGCGGGGAGGGAGACCCATCCTGGTCTTCCTCCCGAGGGAGACCCATCCTaGTCTTCCTCCCGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PASAAPNAGRETHPGLPPEGDPS*SSSRSW
Trigger: CCAGGAACGGGAGGAAGACCAGGATGGGTCTCCCTC...GGGAGGAAGACCAGGATGGGTCTCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS-3UTR TCA 90 bp CCAGCTTCAGCAGCCCCAAACGCGGGGAGGGAGACCCATCCTGGTCTTCCTCCCGTGCTCCTTGGTTGCTaGAACCTCCCTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PASAAPNAGRETHPGLPPVLLGC*NLPLLS
Trigger: AGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCAC...GGGAGGAAGACCAGGATGGGTCTCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS-3UTR CCA 90 bp CTCCAGCTTCAGCAGCCCCAAACGCGGGGAGGGAGACCGTGGAGGGCTCCCATCCAGAGATGGCCTCTTTaGCACTTGGATTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: LQLQQPQTRGGRPWRAPIQRWPL*HLDYFP
Trigger: AGGGAAATAATCCAAGTGCCAAAGAGGCCATCTCTG...GATGGGAGCCCTCCACGGTCTCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611917.1
CDS-3UTR TCA 90 bp CTCCCTCTTCTTTCTTATAGCTCCAGCTTCAGCAGCCCCAAACGCGGGGAGGGACCTCCCGTTCCTGGCTaGGGCTCAAGGAAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: LPLLSYSSSFSSPKRGEGPPVPG*GSRKKN
Trigger: ATTTTTCTTCCTTGAGCCTCAGCCAGGAACGGGAGG...TCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGGAGCTATAAGAAAGAAGAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
CDS-3UTR TCA 90 bp CCAGCTTCAGCAGCCCCAAACGCGGGGAGGGAGACCCATCCTGGTCTTCCTCCCACGCAAAATGGATTTTaGACACTAACCATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PASAAPNAGRETHPGLPPTQNGF*TLTIQF
Trigger: AAACTGGATGGTTAGTGTTCAAAATCCATTTTGCGT...GGGAGGAAGACCAGGATGGGTCTCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS-3UTR CCA 90 bp GATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTTGGTTGCGCTTGGAGCAGCTGCTaGGTCCCGCCCCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: DFVYPFTNQGSGCVLLGCAWSSC*VPPQLS
Trigger: ACTGAGCTGGGGCGGGACCCAGCAGCTGCTCCAAGC...GCAACCAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613899.4
CDS-3UTR CCA 90 bp CTTATAGCTCCAGCTTCAGCAGCCCCAAACGCGGGGAGGGAGACCCATCCTGGTCAGAGATGGCCTCTTTaGCACTTGGATTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: LIAPASAAPNAGRETHPGQRWPL*HLDYFP
Trigger: AGGGAAATAATCCAAGTGCCAAAGAGGCCATCTCTG...ACCAGGATGGGTCTCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGGAGCTATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS-3UTR CCA 90 bp CAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTAGAGAGGACCCATCCTaGTCTTCCTCCCGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QFLSAVLGLHPDSCEQMTREDPS*SSSRSW
Trigger: CCAGGAACGGGAGGAAGACCAGGATGGGTCCTCTCT...AGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611917.1
CDS-3UTR TCA 90 bp CTCCCTCTTCTTTCTTATAGCTCCAGCTTCAGCAGCCCCAAACGCGGGGAGGGAATTCTTTTGAGCTCTTaGGCTTGGGAAGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPLLSYSSSFSSPKRGEGILLSS*AWEVCQ
Trigger: CTGGCACACTTCCCAAGCTCAAGAGCTCAAAAGAAT...TCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGGAGCTATAAGAAAGAAGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS-3UTR GCA 90 bp TTTTTAGAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCGATCACGCTGGGAGCTaGAGACTGGAGCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: FLETGQFLSAVLGLHPDSDHAGS*RLELFR
Trigger: CCGGAACAGCTCCAGTCTGCAGCTCCCAGCGTGATC...GGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613899.4
CDS-3UTR GCA 90 bp GGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGAGGACAATTCTTGAGTaGCGTCCTTGGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: GQFLSAVLGLHPDSCEQMRTILE*RPWPSP
Trigger: GGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCT...CATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp TTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTTCCTCTTCCTCCCGTTCCTaGCTGAGGCTCAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FLSAVLGLHPDSCEQMTSSSSRS*LRLKEE
Trigger: TTCTTCCTTGAGCCTCAGCCAGGAACGGGAGGAAGA...GGAAGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGTCTTCCTCCCGTTCCTaGCTGAGGCTCAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GQFLSAVLGLHPDSCEQMSSSRS*LRLKEE
Trigger: TTCTTCCTTGAGCCTCAGCCAGGAACGGGAGGAAGA...CATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGAGGGTGTGTGCTCCTTaGTTGCTGAAACCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ETGQFLSAVLGLHPDSCERVCAP*LLKPPS
Trigger: AGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCT...CTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR TCA 90 bp AACCTCCCTCTTCTTTCTTATAGCTCCAGCTTCAGCAGCCCCAAACGCGGGGAGGCAGATGACTTCCTCTaGAGCAGCCTGATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: NLPLLSYSSSFSSPKRGEADDFL*SSLILC
Trigger: ACACAAAATCAGGCTGCTTCAGAGGAAGTCATCTGC...CTCCCCGCGTTTGGGGCTGCTGAAGCTGGAGCTATAAGAAAGAAGAGGGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
CDS-3UTR GCA 90 bp CTCCCTCTTCTTTCTTATAGCTCCAGCTTCAGCAGCCCCAAACGCGGGGAGGGATACCACCTGTGTCCTTaGACACACGCAAAATGGATT +
Preference number: 4 (lower is better)
Translates to: LPLLSYSSSFSSPKRGEGYHLCP*THAKWI
Trigger: AATCCATTTTGCGTGTGTGCAAGGACACAGGTGGTA...TCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGGAGCTATAAGAAAGAAGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS-3UTR CCA 90 bp GATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTTGGTTGCCTGCGTCGATCACGCTaGGAGCTGCAGACTGGAGCT +
Preference number: 4 (lower is better)
Translates to: DFVYPFTNQGSGCVLLGCLRRSR*ELQTGA
Trigger: AGCTCCAGTCTGCAGCTCCCAGCGTGATCGACGCAG...GCAACCAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613899.4
CDS-3UTR CCA 90 bp CTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGGAGGGAGACCCATCCTaGTCTTCCTCCCGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LKQPDFVYPFTNQGSGCVEGDPS*SSSRSW
Trigger: CCAGGAACGGGAGGAAGACCAGGATGGGTCTCCCTC...CACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGGCTGGTACTAGGAGTTaGAGGGATGATCACATCTGC +
Preference number: 4 (lower is better)
Translates to: GQFLSAVLGLHPDSCEQMAGTRS*RDDHIC
Trigger: GCAGATGTGATCATCCCTCCAACTCCTAGTACCAGC...CATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611917.1
CDS-3UTR TCA 90 bp TTAGAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTAGACAGGACAATTCTTaGGTGCCGTCCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LETGQFLSAVLGLHPDSCRQDNS*VPSLAF
Trigger: GAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCT...ACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp AGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTTCCTCTGAACTCCAACCATTCTTTTaGGCTCTTGAGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SAVLGLHPDSCEQMTSSELQPFF*ALELGK
Trigger: CTTCCCAAGCTCAAGAGCTCAAAAGAATGGTTGGAG...TTCAGAGGAAGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615135.4
ENST00000615575.5
CDS-3UTR GCA 90 bp TATTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCGAGCACTCCGCCCCCTaGGCCGCGGGTTCCACAGCG +
Preference number: 4 (lower is better)
Translates to: YWFVQQYFLTSGENTWYCEHSAP*AAGSTA
Trigger: CGCTGTGGAACCCGCGGCGCAGGGGGCGGAGTGCTC...GCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615575.5
CDS-3UTR TCA 90 bp AGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTTCCTCTGAATCCTCTGAAGCAGCCTaGTTTTGTGTATCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SAVLGLHPDSCEQMTSSESSEAA*FCVSFH
Trigger: GTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGA...TTCAGAGGAAGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR TCA 90 bp CAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTGCAGATGACTTCCTCTaGAGCAGCCTGATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QFLSAVLGLHPDSCEQMTADDFL*SSLILC
Trigger: ACACAAAATCAGGCTGCTTCAGAGGAAGTCATCTGC...AGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TCAAGGATCAGGGTGTGTGCTCCTTGGTTGCTGAAACCTCCCTCTTCTTTCTTAAGACAGGACAATTCTTaGGTGCCGTCCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SRIRVCAPWLLKPPSSFLRQDNS*VPSLAF
Trigger: GAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCT...TAAGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTGATCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
CDS-3UTR TCA 90 bp TTAGAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGTGCTCCTTGGTTGCTaGAACCTCCCTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LETGQFLSAVLGLHPDSCVLLGC*NLPLLS
Trigger: AGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCAC...ACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAAAGGGTCATGAAATaGTGGGATGGTAACCTTCAG +
Preference number: 4 (lower is better)
Translates to: ETGQFLSAVLGLHPDSCEQRVMK*WDGNLQ
Trigger: CTGAAGGTTACCATCCCACCATTTCATGACCCTTTG...CTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGGGCCTCTTTGGCACTTaGATTATTTCCCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: GQFLSAVLGLHPDSCEQMGLFGT*IISLLI
Trigger: TATCAGGAGGGAAATAATCCAAGTGCCAAAGAGGCC...CATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp TTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTTCCAATACCCTTCAGAGATaGCCTCTTTGGCACTTGGAT +
Preference number: 4 (lower is better)
Translates to: FLSAVLGLHPDSCEQMTSNTLQR*PLWHLD
Trigger: ATCCAAGTGCCAAAGAGGCCATCTCTGAAGGGTATT...GGAAGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTTCCTTTTTCAAAGGGTCATaGAATGGTGGGATGGTAACC +
Preference number: 4 (lower is better)
Translates to: FLSAVLGLHPDSCEQMTSFFKGS*NGGMVT
Trigger: GGTTACCATCCCACCATTTCATGACCCTTTGAAAAA...GGAAGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TTGGTTGCTGAAACCTCCCTCTTCTTTCTTATAGCTCCAGCTTCAGCAGCCCCAGCAGATGACTTCCTCTaGAGCAGCCTGATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LVAETSLFFLIAPASAAPADDFL*SSLILC
Trigger: ACACAAAATCAGGCTGCTTCAGAGGAAGTCATCTGC...TGGGGCTGCTGAAGCTGGAGCTATAAGAAAGAAGAGGGAGGTTTCAGCAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
CDS-3UTR TCA 90 bp CTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGAGACAGGACAATTCTTaGGTGCCGTCCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LKQPDFVYPFTNQGSGCVRQDNS*VPSLAF
Trigger: GAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCT...CACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TTAGAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTATTCTTTTGAGCTCTTaGGCTTGGGAAGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LETGQFLSAVLGLHPDSCILLSS*AWEVCQ
Trigger: CTGGCACACTTCCCAAGCTCAAGAGCTCAAAAGAAT...ACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615575.5
CDS-3UTR TCA 90 bp TTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTTCCAATCTGGAATGCAGCTaGACCTTCTCAACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FLSAVLGLHPDSCEQMTSNLECS*TFSTSL
Trigger: CAAAGAAGTTGAGAAGGTTCAGCTGCATTCCAGATT...GGAAGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TCAAGGATCAGGGTGTGTGCTCCTTGGTTGCTGAAACCTCCCTCTTCTTTCTTAGTGCTCCTTGGTTGCTaGAACCTCCCTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRIRVCAPWLLKPPSSFLVLLGC*NLPLLS
Trigger: AGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCAC...TAAGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTGATCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
CDS-3UTR CCA 90 bp AAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCTCCTCTGGTCACAGCTaGCTCCCAGAAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KQPDFVYPFTNQGSGCVLSSGHS*LPEEAS
Trigger: TGAAGCTTCTTCTGGGAGCCAGCTGTGACCAGAGGA...GAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613899.4
CDS-3UTR CCA 90 bp CAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTAAACTTTTAACCGGATaGCTGGAGCTATTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QFLSAVLGLHPDSCEQMTKLLTG*LELFLW
Trigger: CCAGAGGAATAGCTCCAGCCATCCGGTTAAAAGTTT...AGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613899.4
CDS-3UTR CCA 90 bp CTTCCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTCTTCCTCCCGTTCCTaGCTGAGGCTCAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LPLKQPDFVYPFTNQGSGSSSRS*LRLKEE
Trigger: TTCTTCCTTGAGCCTCAGCCAGGAACGGGAGGAAGA...CCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp CTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGAGGGTGTGTGCTCCTTaGTTGCTGAAACCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LKQPDFVYPFTNQGSGCVRVCAP*LLKPPS
Trigger: AGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCT...CACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp CTTCCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGAGGGTGTGTGCTCCTTaGTTGCTGAAACCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LPLKQPDFVYPFTNQGSGRVCAP*LLKPPS
Trigger: AGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCT...CCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR TCA 90 bp CAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTAATCTGGAATGCAGCTaGACCTTCTCAACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QFLSAVLGLHPDSCEQMTNLECS*TFSTSL
Trigger: CAAAGAAGTTGAGAAGGTTCAGCTGCATTCCAGATT...AGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp AGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTTCCTCTGAAAAATTTGTGGGAATCTaGAATGCAGCTGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: SAVLGLHPDSCEQMTSSEKFVGI*NAAEPS
Trigger: AGAAGGTTCAGCTGCATTCCAGATTCCCACAAATTT...TTCAGAGGAAGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TCAAGGATCAGGGTGTGTGCTCCTTGGTTGCTGAAACCTCCCTCTTCTTTCTTATCCTCTGAAGCAGCCTaGTTTTGTGTATCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SRIRVCAPWLLKPPSSFLSSEAA*FCVSFH
Trigger: GTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGA...TAAGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTGATCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
CDS-3UTR TCA 90 bp CTTCCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGGCAGATGACTTCCTCTaGAGCAGCCTGATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LPLKQPDFVYPFTNQGSGADDFL*SSLILC
Trigger: ACACAAAATCAGGCTGCTTCAGAGGAAGTCATCTGC...CCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR TCA 90 bp CCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTCTCCAACCATTCTTTTaGGCTCTTGAGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PLKQPDFVYPFTNQGSGCLQPFF*ALELGK
Trigger: CTTCCCAAGCTCAAGAGCTCAAAAGAATGGTTGGAG...ACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615135.4
ENST00000615575.5
CDS-3UTR GCA 90 bp TTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCAAAGCTTGGAGCAGCTaGTGGGTCCCGCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FVQQYFLTSGENTWYCHFKAWSS*WVPPQL
Trigger: GAGCTGGGGCGGGACCCAGCAGCTGCTCCAAGCTTT...GAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613899.4
CDS-3UTR GCA 90 bp GAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGAATTGGGGTCCTTCTTaGTCATATAAAAGGGATCAT +
Preference number: 4 (lower is better)
Translates to: ETGQFLSAVLGLHPDSCENWGPS*SYKRDH
Trigger: ATGATCCCTTTTATATGAGCAAGAAGGACCCCAATT...CTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp TTAGAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTAGGGTCATGAAATGGTaGGATGGTAACCTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LETGQFLSAVLGLHPDSCRVMKW*DGNLQK
Trigger: TTTCTGAAGGTTACCATCCCACCATTTCATGACCCT...ACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp TTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCAGAGGGAGACCCATCCTaGTCTTCCTCCCGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVRSAIFLNFWGKYMVLPEGDPS*SSSRSW
Trigger: CCAGGAACGGGAGGAAGACCAGGATGGGTCTCCCTC...TGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp AGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTTGTCCTCTGAAGCAGCCTaGTTTTGTGTATCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SLILCILSPIKDQGVCSLSSEAA*FCVSFH
Trigger: GTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGA...CAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp CTTCCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGGGCCTCTTTGGCACTTaGATTATTTCCCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: LPLKQPDFVYPFTNQGSGGLFGT*IISLLI
Trigger: TATCAGGAGGGAAATAATCCAAGTGCCAAAGAGGCC...CCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTTGGTTGCCAGAGATGGCCTCTTTaGCACTTGGATTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: DFVYPFTNQGSGCVLLGCQRWPL*HLDYFP
Trigger: AGGGAAATAATCCAAGTGCCAAAGAGGCCATCTCTG...GCAACCAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTTGGTTGCAATACCCTTCAGAGATaGCCTCTTTGGCACTTGGAT +
Preference number: 4 (lower is better)
Translates to: DFVYPFTNQGSGCVLLGCNTLQR*PLWHLD
Trigger: ATCCAAGTGCCAAAGAGGCCATCTCTGAAGGGTATT...GCAACCAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CCA 90 bp AAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCAATACCCTTCAGAGATaGCCTCTTTGGCACTTGGAT +
Preference number: 4 (lower is better)
Translates to: KQPDFVYPFTNQGSGCVLNTLQR*PLWHLD
Trigger: ATCCAAGTGCCAAAGAGGCCATCTCTGAAGGGTATT...GAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR GCA 90 bp CAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTAAGATAAGGAGCTCTTaGCAAAGGTTTCAAATCAAA +
Preference number: 4 (lower is better)
Translates to: QFLSAVLGLHPDSCEQMTKIRSS*QRFQIK
Trigger: TTTGATTTGAAACCTTTGGCAAGAGCTCCTTATCTT...AGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCACCTCCCGTTCCTGGCTaGGGCTCAAGGAAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: LVRSAIFLNFWGKYMVLPPPVPG*GSRKKN
Trigger: ATTTTTCTTCCTTGAGCCTCAGCCAGGAACGGGAGG...TGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATAGACAGGACAATTCTTaGGTGCCGTCCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WFVQQYFLTSGENTWYCHRQDNS*VPSLAF
Trigger: GAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCT...ATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR GCA 90 bp TGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATAAATCACCTGTCTTCTaGGTCGATCACGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: WFVQQYFLTSGENTWYCHKSPVF*VDHAGS
Trigger: GCTCCCAGCGTGATCGACGCAGAAGACAGGTGATTT...ATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613899.4
CDS-3UTR GCA 90 bp TGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATAGGACAATTCTTGAGTaGCGTCCTTGGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: WFVQQYFLTSGENTWYCHRTILE*RPWPSP
Trigger: GGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCT...ATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GGGGAAAATACATGGTATTGCCATTTCTTAATTATCACAGACACTGAACTCAAAAATGGCAGAAAAGCTTaGAGCAGCTGCTGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GENTWYCHFLIITDTELKNGRKA*SSCWVP
Trigger: CGGGACCCAGCAGCTGCTCCAAGCTTTTCTGCCATT...TTTGAGTTCAGTGTCTGTGATAATTAAGAAATGGCAATACCATGTATTTTCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000613899.4
CDS-3UTR CCA 90 bp AAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCAAATTTGTGGGAATCTaGAATGCAGCTGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: KQPDFVYPFTNQGSGCVLKFVGI*NAAEPS
Trigger: AGAAGGTTCAGCTGCATTCCAGATTCCCACAAATTT...GAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TATTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCCTCCCGTTCCTGGCTaGGGCTCAAGGAAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: YWFVQQYFLTSGENTWYCPPVPG*GSRKKN
Trigger: ATTTTTCTTCCTTGAGCCTCAGCCAGGAACGGGAGG...GCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR GCA 90 bp CTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGAATTGGGGTCCTTCTTaGTCATATAAAAGGGATCAT +
Preference number: 4 (lower is better)
Translates to: LKQPDFVYPFTNQGSGCVNWGPS*SYKRDH
Trigger: ATGATCCCTTTTATATGAGCAAGAAGGACCCCAATT...CACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR GCA 90 bp CGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCTTAGGACAATTCTTGAGTaGCGTCCTTGGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: RSAIFLNFWGKYMVLPFLRTILE*RPWPSP
Trigger: GGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCT...AAGAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR GCA 90 bp TGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATAGGGATGATCACATCTaGACAGAGAGGACCCATCCT +
Preference number: 4 (lower is better)
Translates to: WFVQQYFLTSGENTWYCHRDDHI*TERTHP
Trigger: AGGATGGGTCCTCTCTGTGCAGATGTGATCATCCCT...ATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611917.1
CDS-3UTR CCA 90 bp GGGGAAAATACATGGTATTGCCATTTCTTAATTATCACAGACACTGAACTCAAATCTTCCTCCCGTTCCTaGCTGAGGCTCAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GENTWYCHFLIITDTELKSSSRS*LRLKEE
Trigger: TTCTTCCTTGAGCCTCAGCCAGGAACGGGAGGAAGA...TTTGAGTTCAGTGTCTGTGATAATTAAGAAATGGCAATACCATGTATTTTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTTCTTCCTCCCGTTCCTaGCTGAGGCTCAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: VRSAIFLNFWGKYMVLPFSSSRS*LRLKEE
Trigger: TTCTTCCTTGAGCCTCAGCCAGGAACGGGAGGAAGA...AAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GGGGAAAATACATGGTATTGCCATTTCTTAATTATCACAGACACTGAACTCAAAAGGGTGTGTGCTCCTTaGTTGCTGAAACCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GENTWYCHFLIITDTELKRVCAP*LLKPPS
Trigger: AGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCT...TTTGAGTTCAGTGTCTGTGATAATTAAGAAATGGCAATACCATGTATTTTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTTGGTTGCTGCACACACGCAAAATaGATTTTGAACACTAACCAT +
Preference number: 4 (lower is better)
Translates to: DFVYPFTNQGSGCVLLGCCTHAK*ILNTNH
Trigger: ATGGTTAGTGTTCAAAATCCATTTTGCGTGTGTGCA...GCAACCAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS-3UTR TCA 90 bp GGGGAAAATACATGGTATTGCCATTTCTTAATTATCACAGACACTGAACTCAAAGTGCTCCTTGGTTGCTaGAACCTCCCTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GENTWYCHFLIITDTELKVLLGC*NLPLLS
Trigger: AGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCAC...TTTGAGTTCAGTGTCTGTGATAATTAAGAAATGGCAATACCATGTATTTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR GCA 90 bp TGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATCTTCTGAAGAGGATCTaGCACACAGTCAACCCATCT +
Preference number: 4 (lower is better)
Translates to: WFVQQYFLTSGENTWYCHLLKRI*HTVNPS
Trigger: AGATGGGTTGACTGTGTGGCAGATCCTCTTCAGAAG...ATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615575.5
CDS-3UTR GCA 90 bp AGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTTGAAGATAAGGAGCTCTTaGCAAAGGTTTCAAATCAAA +
Preference number: 4 (lower is better)
Translates to: SLILCILSPIKDQGVCSLKIRSS*QRFQIK
Trigger: TTTGATTTGAAACCTTTGGCAAGAGCTCCTTATCTT...CAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TATTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCGCAGATGACTTCCTCTaGAGCAGCCTGATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: YWFVQQYFLTSGENTWYCADDFL*SSLILC
Trigger: ACACAAAATCAGGCTGCTTCAGAGGAAGTCATCTGC...GCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp TGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATGGCCTCTTTGGCACTTaGATTATTTCCCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: WFVQQYFLTSGENTWYCHGLFGT*IISLLI
Trigger: TATCAGGAGGGAAATAATCCAAGTGCCAAAGAGGCC...ATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp GTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTTCCTCTGAAGCAGCCTaGTTTTGTGTATCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: VRSAIFLNFWGKYMVLPFSSEAA*FCVSFH
Trigger: GTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGA...AAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp GGGGAAAATACATGGTATTGCCATTTCTTAATTATCACAGACACTGAACTCAAACAAAGGGTCATGAAATaGTGGGATGGTAACCTTCAG +
Preference number: 4 (lower is better)
Translates to: GENTWYCHFLIITDTELKQRVMK*WDGNLQ
Trigger: CTGAAGGTTACCATCCCACCATTTCATGACCCTTTG...TTTGAGTTCAGTGTCTGTGATAATTAAGAAATGGCAATACCATGTATTTTCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp TTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCGGCCTCTTTGGCACTTaGATTATTTCCCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: FVQQYFLTSGENTWYCHFGLFGT*IISLLI
Trigger: TATCAGGAGGGAAATAATCCAAGTGCCAAAGAGGCC...GAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp CGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCTTAATACCCTTCAGAGATaGCCTCTTTGGCACTTGGAT +
Preference number: 4 (lower is better)
Translates to: RSAIFLNFWGKYMVLPFLNTLQR*PLWHLD
Trigger: ATCCAAGTGCCAAAGAGGCCATCTCTGAAGGGTATT...AAGAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCTTTTTCAAAGGGTCATaGAATGGTGGGATGGTAACC +
Preference number: 4 (lower is better)
Translates to: FVQQYFLTSGENTWYCHFFFKGS*NGGMVT
Trigger: GGTTACCATCCCACCATTTCATGACCCTTTGAAAAA...GAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCAATCTGGAATGCAGCTaGACCTTCTCAACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FVQQYFLTSGENTWYCHFNLECS*TFSTSL
Trigger: CAAAGAAGTTGAGAAGGTTCAGCTGCATTCCAGATT...GAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CCA 90 bp TTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCAGGGTCATGAAATGGTaGGATGGTAACCTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: FVQQYFLTSGENTWYCHFRVMKW*DGNLQK
Trigger: TTTCTGAAGGTTACCATCCCACCATTTCATGACCCT...GAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR TCA 90 bp TATTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCTCTATAATTTTCTTCTaGAGAGGATCTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: YWFVQQYFLTSGENTWYCSIIFF*RGSATQ
Trigger: CTGTGTGGCAGATCCTCTTCAGAAGAAAATTATAGA...GCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615575.5
CDS-3UTR CCA 90 bp TTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCAAATTTGTGGGAATCTaGAATGCAGCTGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: FVQQYFLTSGENTWYCHFKFVGI*NAAEPS
Trigger: AGAAGGTTCAGCTGCATTCCAGATTCCCACAAATTT...GAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS TCA 90 bp TATGCCCTGGCCACAGAGATGGAGTCTAGAGGCAGTAGGCCTTACTaGGCTGCAGTGGGCTCTGCCCAGTTCGAACTTCCCGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: YALATEMESRGSRPY*AAVGSAQFELPGCF
Trigger: AAAGCAGCCGGGAAGTTCGAACTGGGCAGAGCCCACTGCAGCTCAGTAAGGCCTACTGCCTCTAGACTCCATCTCTGTGGCCAGGGCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 90 bp GAGCTATTCCTCTGGTCACAGCTGGCTCCCAGAAGAAGCTTCAAATaGCAGAAAAGCTTGGAGCAGCTGCTGGGTCCCGCCCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: ELFLWSQLAPRRSFK*QKSLEQLLGPAPAQ
Trigger: CTGAGCTGGGGCGGGACCCAGCAGCTGCTCCAAGCTTTTCTGCCATTTGAAGCTTCTTCTGGGAGCCAGCTGTGACCAGAGGAATAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461972.5
ENST00000486967.5
ENST00000613899.4
CDS-3UTR CAA 90 bp CTCTTCTTTCTTATAGCTCCAGCTTCAGCAGCCCCAAACGCGGGGAGGGAGACCCAGGGTGTGTGCTCCTaGGTTGCTGAAACCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LFFLIAPASAAPNAGRETQGVCS*VAETSL
Trigger: GAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTG...GGTCTCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGGAGCTATAAGAAAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
CDS-3UTR CAA 90 bp CCAGCTTCAGCAGCCCCAAACGCGGGGAGGGAGACCCATCCTGGTCTTCCTCCCATAAAACAAAGGGGCTaGGGCTCCAACCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: PASAAPNAGRETHPGLPPIKQRG*GSNHSF
Trigger: AAAAGAATGGTTGGAGCCCAAGCCCCTTTGTTTTAT...GGGAGGAAGACCAGGATGGGTCTCCCTCCCCGCGTTTGGGGCTGCTGAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS CCA 90 bp CCACAGAGATGGAGTCTAGAGGCAGTAGGCCTTACTGAGCTGCAGTaGGCTCTGCCCAGTTCGAACTTCCCGGCTGCTTTGTTTACCTAC +
Preference number: 5 (lower is better)
Translates to: PQRWSLEAVGLTELQ*ALPSSNFPAALFTY
Trigger: GTAGGTAAACAAAGCAGCCGGGAAGTTCGAACTGGGCAGAGCCCACTGCAGCTCAGTAAGGCCTACTGCCTCTAGACTCCATCTCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 90 bp GGTCGGTTGGAGTTTGCTGGAGGTCCACCCCAGACCCTGTTTTCCTaGGTATCACCAGCGGAGGCTGCAGAACAGCAAATATTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: GRLEFAGGPPQTLFS*VSPAEAAEQQILQN
Trigger: GTTCTGCAATATTTGCTGTTCTGCAGCCTCCGCTGGTGATACCCAGGAAAACAGGGTCTGGGGTGGACCTCCAGCAAACTCCAACCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS-3UTR CAA 90 bp GAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGGGTGTGTGCTCCTaGGTTGCTGAAACCTCCCTC +
Preference number: 5 (lower is better)
Translates to: ETGQFLSAVLGLHPDSCEQGVCS*VAETSL
Trigger: GAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTG...CTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CAA 90 bp GGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGCAGGGTGTGTGCTCCTaGGTTGCTGAAACCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GQFLSAVLGLHPDSCEQMQGVCS*VAETSL
Trigger: GAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTG...CATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CAA 90 bp GAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGGTGTGTGCTCCTTGGTaGCTGAAACCCATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: ETGQFLSAVLGLHPDSCEVCAPW*LKPILV
Trigger: GACCAGGATGGGTTTCAGCAACCAAGGAGCACACAC...CTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611138.1
CDS TCA 90 bp CAGCTCCCCATCCGTGGGCTGCACCCACTGTCAAACCAGTCCCAGTaGGATGAATCAGTTACCTCAGTCGGAAATGCAGAAATCACCTGT +
Preference number: 5 (lower is better)
Translates to: QLPIRGLHPLSNQSQ*DESVTSVGNAEITC
Trigger: ACAGGTGATTTCTGCATTTCCGACTGAGGTAACTGATTCATCTCACTGGGACTGGTTTGACAGTGGGTGCAGCCCACGGATGGGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS-3UTR CAA 90 bp AGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGACTTCCTCTGAAGAGACAGGACAATTCTaGAGTGCCGTCCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SAVLGLHPDSCEQMTSSEETGQF*SAVLGL
Trigger: AAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC...TTCAGAGGAAGTCATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CAA 90 bp GAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGGAGACAGGACAATTCTaGAGTGCCGTCCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: ETGQFLSAVLGLHPDSCEETGQF*SAVLGL
Trigger: AAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC...CTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS GCA 90 bp ATGAATCAGTTACCTCAGTCGGAAATGCAGAAATCACCTGTCTTCTaGGTCGATCACGCTGGGAGCTGCAGACTGGAGCTGTTCCGGTTG +
Preference number: 5 (lower is better)
Translates to: MNQLPQSEMQKSPVF*VDHAGSCRLELFRL
Trigger: CAACCGGAACAGCTCCAGTCTGCAGCTCCCAGCGTGATCGACGCAGAAGACAGGTGATTTCTGCATTTCCGACTGAGGTAACTGATTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 90 bp GAAATGCAGAAATCACCTGTCTTCTGCGTCGATCACGCTGGGAGCTaGAGACTGGAGCTGTTCCGGTTGTTAAATTATTGGCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: EMQKSPVFCVDHAGS*RLELFRLLNYWPGR
Trigger: TCTGCCTGGCCAATAATTTAACAACCGGAACAGCTCCAGTCTGCAGCTCCCAGCGTGATCGACGCAGAAGACAGGTGATTTCTGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461972.5
CDS CCA 90 bp TCAGTCGGAAATGCAGAAATCACCTGTCTTCTGCGTCGATCACGCTaGGAGCTGCAGACTGGAGCTGTTCCGGTTGTTAAATTATTGGCC +
Preference number: 5 (lower is better)
Translates to: SVGNAEITCLLRRSR*ELQTGAVPVVKLLA
Trigger: GGCCAATAATTTAACAACCGGAACAGCTCCAGTCTGCAGCTCCCAGCGTGATCGACGCAGAAGACAGGTGATTTCTGCATTTCCGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461972.5
CDS GCA 90 bp TTCTGTCGACTTGTCAAAGTCATTCTCCATCCAGCTTTGTCTCTTTaGTGGCGAGGAGTTGCGATCCTTTGGAGGAGAAGAGGCACTCTG +
Preference number: 5 (lower is better)
Translates to: FCRLVKVILHPALSL*WRGVAILWRRRGTL
Trigger: CAGAGTGCCTCTTCTCCTCCAAAGGATCGCAACTCCTCGCCAGCAAAGAGACAAAGCTGGATGGAGAATGACTTTGACAAGTCGACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 90 bp TCAGTCGGAAATGCAGAAATCACCTGTCTTCTGCGTCGATCACGCTaGGAGCTGCAGACTGGAGCTGTTCCGGTTGTTAAACTTTTAACC +
Preference number: 5 (lower is better)
Translates to: SVGNAEITCLLRRSR*ELQTGAVPVVKLLT
Trigger: GGTTAAAAGTTTAACAACCGGAACAGCTCCAGTCTGCAGCTCCCAGCGTGATCGACGCAGAAGACAGGTGATTTCTGCATTTCCGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469867.1
ENST00000613899.4
CDS-3UTR CAA 90 bp CTTCCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGAAATGGCAGAAAAGCTaGGAGCAGCTGCTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: LPLKQPDFVYPFTNQGSGKWQKS*EQLLGP
Trigger: GGGACCCAGCAGCTGCTCCAAGCTTTTCTGCCATTT...CCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613899.4
CDS-3UTR CAA 90 bp GTTGCTGAAACCTCCCTCTTCTTTCTTATAGCTCCAGCTTCAGCAGCCCCAAACTTTGAGCTCTTGAGCTaGGGAAGTGTGCCAGTTACC +
Preference number: 5 (lower is better)
Translates to: VAETSLFFLIAPASAAPNFELLS*GSVPVT
Trigger: GGTAACTGGCACACTTCCCAAGCTCAAGAGCTCAAA...GTTTGGGGCTGCTGAAGCTGGAGCTATAAGAAAGAAGAGGGAGGTTTCAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS TCA 90 bp AGGCTGCAGAACAGCAAATATTGCAGAACAGCAAATACTACTTCCTaGTCCTTCCTCTGGAAGCTTCGTCCCAGAGAGGCAGGTGCCTAT +
Preference number: 5 (lower is better)
Translates to: RLQNSKYCRTANTTS*SFLWKLRPREAGAY
Trigger: ATAGGCACCTGCCTCTCTGGGACGAAGCTTCCAGAGGAAGGATCAGGAAGTAGTATTTGCTGTTCTGCAATATTTGCTGTTCTGCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS-3UTR CAA 90 bp TTTTTAGAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTTTGAGCTCTTGAGCTaGGGAAGTGTGCCAGTTACC +
Preference number: 5 (lower is better)
Translates to: FLETGQFLSAVLGLHPDSFELLS*GSVPVT
Trigger: GGTAACTGGCACACTTCCCAAGCTCAAGAGCTCAAA...GGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615575.5
CDS-3UTR CAA 90 bp GTTGCTGAAACCTCCCTCTTCTTTCTTATAGCTCCAGCTTCAGCAGCCCCAAACTGGCCTCTTTGGCACTaGGATTATTTCCCTCCTGAT +
Preference number: 5 (lower is better)
Translates to: VAETSLFFLIAPASAAPNWPLWH*DYFPPD
Trigger: ATCAGGAGGGAAATAATCCAAGTGCCAAAGAGGCCA...GTTTGGGGCTGCTGAAGCTGGAGCTATAAGAAAGAAGAGGGAGGTTTCAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611917.1
ENST00000615135.4
CDS-3UTR CAA 90 bp AAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCGTGTGTGCTCCTTGGTaGCTGAAACCTCCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KQPDFVYPFTNQGSGCVLVCAPW*LKPPSS
Trigger: AGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACAC...GAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CAA 90 bp CTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGGTGTGTGCTCCTTGGTaGCTGAAACCTCCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LKQPDFVYPFTNQGSGCVVCAPW*LKPPSS
Trigger: AGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACAC...CACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CAA 90 bp TCAAGGATCAGGGTGTGTGCTCCTTGGTTGCTGAAACCTCCCTCTTCTTTCTTACATTCTTTTGAGCTCTaGAGCTTGGGAAGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: SRIRVCAPWLLKPPSSFLHSFEL*SLGSVP
Trigger: TGGCACACTTCCCAAGCTCAAGAGCTCAAAAGAATG...TAAGAAAGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTGATCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS-3UTR CAA 90 bp GGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTGAGCAGATGAGAAAGGATGACCCTTaGTTTCTTCTCCTTCTACAA +
Preference number: 5 (lower is better)
Translates to: GQFLSAVLGLHPDSCEQMRKDDP*FLLLLQ
Trigger: TTGTAGAAGGAGAAGAAACAAAGGGTCATCCTTTCT...CATCTGCTCACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611917.1
CDS CCA 90 bp GAGCTATTCCTCTGGTCACAGCTGGCTCCCAGAAGAAGCTTCAAATaGCAGAAAAGCTTGGAGCAGCTGTATATTAGGAAGTATTTCGAG +
Preference number: 5 (lower is better)
Translates to: ELFLWSQLAPRRSFK*QKSLEQLYIRKYFE
Trigger: CTCGAAATACTTCCTAATATACAGCTGCTCCAAGCTTTTCTGCCATTTGAAGCTTCTTCTGGGAGCCAGCTGTGACCAGAGGAATAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460686.1
CDS-3UTR CAA 90 bp CTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCATTCTTTTGAGCTCTaGAGCTTGGGAAGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: LKQPDFVYPFTNQGSGCVHSFEL*SLGSVP
Trigger: TGGCACACTTCCCAAGCTCAAGAGCTCAAAAGAATG...CACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CAA 90 bp TTAGAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTATAAAACAAAGGGGCTaGGGCTCCAACCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: LETGQFLSAVLGLHPDSCIKQRG*GSNHSF
Trigger: AAAAGAATGGTTGGAGCCCAAGCCCCTTTGTTTTAT...ACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615575.5
CDS-3UTR CAA 90 bp AAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCTGGCCTCTTTGGCACTaGGATTATTTCCCTCCTGAT +
Preference number: 5 (lower is better)
Translates to: KQPDFVYPFTNQGSGCVLWPLWH*DYFPPD
Trigger: ATCAGGAGGGAAATAATCCAAGTGCCAAAGAGGCCA...GAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CAA 90 bp CTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGTCAGAGATGGCCTCTTaGGCACTTGGATTATTTCCC +
Preference number: 5 (lower is better)
Translates to: LKQPDFVYPFTNQGSGCVSEMAS*ALGLFP
Trigger: GGGAAATAATCCAAGTGCCAAAGAGGCCATCTCTGA...CACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CAA 90 bp GATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTTGGTTGCTCAGAGATGGCCTCTTaGGCACTTGGATTATTTCCC +
Preference number: 5 (lower is better)
Translates to: DFVYPFTNQGSGCVLLGCSEMAS*ALGLFP
Trigger: GGGAAATAATCCAAGTGCCAAAGAGGCCATCTCTGA...GCAACCAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS-3UTR CAA 90 bp GATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTGTGCTCCTTGGTTGCGTAACCTTCAGAAAATaGGGGTCCTTCTTGCTCATA +
Preference number: 5 (lower is better)
Translates to: DFVYPFTNQGSGCVLLGCVTFRK*GSFLLI
Trigger: TATGAGCAAGAAGGACCCCAATTTTCTGAAGGTTAC...GCAACCAAGGAGCACACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CAA 90 bp TTAGAGACAGGACAATTCTTGAGTGCCGTCCTTGGCCTTCACCCTGATTCCTGTAAAGATAAGGAGCTCTaGCCAAAGGTTTCAAATCAA +
Preference number: 5 (lower is better)
Translates to: LETGQFLSAVLGLHPDSCKDKEL*PKVSNQ
Trigger: TTGATTTGAAACCTTTGGCAAGAGCTCCTTATCTTT...ACAGGAATCAGGGTGAAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CAA 90 bp TTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCCAGGGTGTGTGCTCCTaGGTTGCTGAAACCTCCCTC +
Preference number: 5 (lower is better)
Translates to: FVQQYFLTSGENTWYCHFQGVCS*VAETSL
Trigger: GAGGGAGGTTTCAGCAACCAAGGAGCACACACCCTG...GAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS TCA 90 bp ATCTTCCTCCATCCCTTTATTTTAGTCTATGTGTGTCTTTGCACATaGGCTGGGTCTCCTGAATACAGCACATTGATGGGTCTTGACTCT +
Preference number: 5 (lower is better)
Translates to: IFLHPFILVYVCLCT*AGSPEYSTLMGLDS
Trigger: AGAGTCAAGACCCATCAATGTGCTGTATTCAGGAGACCCAGCTCATGTGCAAAGACACACATAGACTAAAATAAAGGGATGGAGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 90 bp CATAGCATCGATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTaGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTTAGGAGC +
Preference number: 5 (lower is better)
Translates to: HSIDGLYNLACFCSG*YQLFLSMFSASFRS
Trigger: GCTCCTAAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATCGATGCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS-3UTR CAA 90 bp TGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATGTGTGTGCTCCTTGGTaGCTGAAACCTCCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: WFVQQYFLTSGENTWYCHVCAPW*LKPPSS
Trigger: AGAAGAGGGAGGTTTCAGCAACCAAGGAGCACACAC...ATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CAA 90 bp CCTCTGAAGCAGCCTGATTTTGTGTATCCTTTCACCAATCAAGGATCAGGGTGTCACGCAAAATGGATTTaGAACACTAACCATCCAGTT +
Preference number: 5 (lower is better)
Translates to: PLKQPDFVYPFTNQGSGCHAKWI*NTNHPV
Trigger: AACTGGATGGTTAGTGTTCAAAATCCATTTTGCGTG...ACACCCTGATCCTTGATTGGTGAAAGGATACACAAAATCAGGCTGCTTCAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615135.4
CDS TCA 90 bp TCTTGTAGGCAGTTTCAGCCACTCGTTTGGAGTTATAAAGTGCCTTaGATTAGAAATTTGTGGGAATCTGGAATGCAGCTGAACCTTCTC +
Preference number: 5 (lower is better)
Translates to: SCRQFQPLVWSYKVP*IRNLWESGMQLNLL
Trigger: GAGAAGGTTCAGCTGCATTCCAGATTCCCACAAATTTCTAATTCAAGGCACTTTATAACTCCAAACGAGTGGCTGAAACTGCCTACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611127.4
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS GCA 90 bp CAGTTTCTTCATAGCATCGATGGTCTTTACAATTTGGCATGTTTTTaGAGTGGCTGGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: QFLHSIDGLYNLACF*SGWYQLFLSMFSAS
Trigger: GGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATCGATGCTATGAAGAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 90 bp CAGCCAGTTCAGCTCACAATTCAAGCAATCATCCATATTTCAGTATaGAGCAGAAGTGCTGTTCGCATACTCCCATTTCATCACAAAGAA +
Preference number: 5 (lower is better)
Translates to: QPVQLTIQAIIHISV*SRSAVRILPFHHKE
Trigger: TTCTTTGTGATGAAATGGGAGTATGCGAACAGCACTTCTGCTGCATACTGAAATATGGATGATTGCTTGAATTGTGAGCTGAACTGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486967.5
CDS-3UTR CAA 90 bp TATTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCGAGACAGGACAATTCTaGAGTGCCGTCCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: YWFVQQYFLTSGENTWYCETGQF*SAVLGL
Trigger: AAGGCCAAGGACGGCACTCAAGAATTGTCCTGTCTC...GCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611138.1
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CAA 90 bp TTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATGGCCTCTTTGGCACTaGGATTATTTCCCTCCTGAT +
Preference number: 5 (lower is better)
Translates to: LVRSAIFLNFWGKYMVLPWPLWH*DYFPPD
Trigger: ATCAGGAGGGAAATAATCCAAGTGCCAAAGAGGCCA...TGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS GCA 90 bp GCTCACAATTCAAGCAATCATCCATATTTCAGTATGCAGCAGAAGTaGTGTTCGCATACTCCCATTTCATCACAAAGAACATCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: AHNSSNHPYFSMQQK*CSHTPISSQRTSSE
Trigger: TTCTGAAGATGTTCTTTGTGATGAAATGGGAGTATGCGAACAGCACTTCTGCTGCATACTGAAATATGGATGATTGCTTGAATTGTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486967.5
CDS-3UTR CAA 90 bp TATTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCTGGCCTCTTTGGCACTaGGATTATTTCCCTCCTGAT +
Preference number: 5 (lower is better)
Translates to: YWFVQQYFLTSGENTWYCWPLWH*DYFPPD
Trigger: ATCAGGAGGGAAATAATCCAAGTGCCAAAGAGGCCA...GCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CAA 90 bp TTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCTCAGAGATGGCCTCTTaGGCACTTGGATTATTTCCC +
Preference number: 5 (lower is better)
Translates to: FVQQYFLTSGENTWYCHFSEMAS*ALGLFP
Trigger: GGGAAATAATCCAAGTGCCAAAGAGGCCATCTCTGA...GAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611917.1
ENST00000613899.4
ENST00000615575.5
CDS CCA 90 bp TTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGTGTCTTaGGGTTGCTCTTCTCAAGGAGTATCTTTGTGGTGTTCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: FFLHFNLGESDNYVS*GCSSQGVSLWCSLY
Trigger: ATACAGAGAACACCACAAAGATACTCCTTGAGAAGAGCAACCCCAAGACACATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS-3UTR CAA 90 bp TTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCAGTAACCTTCAGAAAATaGGGGTCCTTCTTGCTCATA +
Preference number: 5 (lower is better)
Translates to: LVRSAIFLNFWGKYMVLPVTFRK*GSFLLI
Trigger: TATGAGCAAGAAGGACCCCAATTTTCTGAAGGTTAC...TGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CAA 90 bp TTGGTTCGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCAAAAGATAAGGAGCTCTaGCCAAAGGTTTCAAATCAA +
Preference number: 5 (lower is better)
Translates to: LVRSAIFLNFWGKYMVLPKDKEL*PKVSNQ
Trigger: TTGATTTGAAACCTTTGGCAAGAGCTCCTTATCTTT...TGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACGAACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613899.4
ENST00000615575.5
CDS-3UTR CAA 90 bp CGTTCAGCAATATTTCTTAACTTCTGGGGAAAATACATGGTATTGCCATTTCTTACATCTCCTTTCTTCTaGCATTTAAGAAGGCATGAT +
Preference number: 5 (lower is better)
Translates to: RSAIFLNFWGKYMVLPFLTSPFF*HLRRHD
Trigger: ATCATGCCTTCTTAAATGCAAGAAGAAAGGAGATGT...AAGAAATGGCAATACCATGTATTTTCCCCAGAAGTTAAGAAATATTGCTGAACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615575.5
CDS GCA 72 bp CCTGACCCCTTGCACTTCCAGGGTGAGGTGACGCCCTaGCCTGCTTCAGCTCCCCATCCGTGGGCTGCACCC +
Preference number: 6 (lower is better)
Translates to: PDPLHFQGEVTP*PASAPHPWAAP
Trigger: GGGTGCAGCCCACGGATGGGGAGCTGAAGCAGGGCAGGGCGTCACCTCACCCTGGAAGTGCAAGGGGTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp CCTCAGCAACAGCGGACGCCCCTCCCCCAGCCAGGCTaGCGCCTCACAGTTCGATCTCAGACTGCTGCACTA +
Preference number: 6 (lower is better)
Translates to: PQQQRTPLPQPG*RLTVRSQTAAL
Trigger: TAGTGCAGCAGTCTGAGATCGAACTGTGAGGCGGCAGCCTGGCTGGGGGAGGGGCGTCCGCTGTTGCTGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 90 bp CTGTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCCTGACCCCTaGCACTTCCAGGGTGAGGTGACGCCCTGCCCTGCTTCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: LSRLPLARKGKSPDP*HFQGEVTPCPASAP
Trigger: GGGAGCTGAAGCAGGGCAGGGCGTCACCTCACCCTGGAAGTGCAAGGGGTCAGGGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp ACTGCTGCACTAGCAGTGAGCAAGGCTCCGTGGGTGTaGAACCCGCCGAGCCAGGCATGGGAGAGAATCTCC +
Preference number: 6 (lower is better)
Translates to: TAALAVSKAPWV*NPPSQAWERIS
Trigger: GGAGATTCTCTCCCATGCCTGGCTCGGCGGGTTCCACACCCACGGAGCCTTGCTCACTGCTAGTGCAGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 90 bp ACTGAGCTGCAGTGGGCTCTGCCCAGTTCGAACTTCCCGGCTGCTTaGTTTACCTACTCAAGCCTCAGCAACAGCGGACGCCCCTCCCCC +
Preference number: 6 (lower is better)
Translates to: TELQWALPSSNFPAA*FTYSSLSNSGRPSP
Trigger: GGGGGAGGGGCGTCCGCTGTTGCTGAGGCTTGAGTAGGTAAACAAAGCAGCCGGGAAGTTCGAACTGGGCAGAGCCCACTGCAGCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp GCCAGGCTGCCGCCTCACAGTTCGATCTCAGACTGCTaGACTAGCAGTGAGCAAGGCTCCGTGGGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: ARLPPHSSISDC*TSSEQGSVGVE
Trigger: TTCCACACCCACGGAGCCTTGCTCACTGCTAGTGCAGCAGTCTGAGATCGAACTGTGAGGCGGCAGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp CTTCCCTTGGCTAGGAAAGGGAAATCCCCTGACCCCTaGCACTTCCAGGGTGAGGTGACGCCCTGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: LPLARKGKSPDP*HFQGEVTPCPA
Trigger: AGCAGGGCAGGGCGTCACCTCACCCTGGAAGTGCAAGGGGTCAGGGGATTTCCCTTTCCTAGCCAAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS TCA 72 bp TCTGGAAGCTTCGTCCCAGAGAGGCAGGTGCCTATATaGGGTGTCTGTCGGCCCCTCCTGGGAGGTATCTCC +
Preference number: 6 (lower is better)
Translates to: SGSFVPERQVPI*GVCRPLLGGIS
Trigger: GGAGATACCTCCCAGGAGGGGCCGACAGACACCTCATATAGGCACCTGCCTCTCTGGGACGAAGCTTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp ATCCTTCCTCTGGAAGCTTCGTCCCAGAGAGGCAGGTaGCTATATGAGGTGTCTGTCGGCCCCTCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: ILPLEASSQRGR*LYEVSVGPSWE
Trigger: CTCCCAGGAGGGGCCGACAGACACCTCATATAGGCACCTGCCTCTCTGGGACGAAGCTTCCAGAGGAAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp ACTGTCAGGTCCCTCAGCTGCAGGTCGGTTGGAGTTTaGTGGAGGTCCACCCCAGACCCTGTTTTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: TVRSLSCRSVGV*WRSTPDPVFLG
Trigger: ACCCAGGAAAACAGGGTCTGGGGTGGACCTCCAGCAAACTCCAACCGACCTGCAGCTGAGGGACCTGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp GTCAGGTCCCTCAGCTGCAGGTCGGTTGGAGTTTGCTaGAGGTCCACCCCAGACCCTGTTTTCCTGGGTATC +
Preference number: 6 (lower is better)
Translates to: VRSLSCRSVGVC*RSTPDPVFLGI
Trigger: GATACCCAGGAAAACAGGGTCTGGGGTGGACCTCCAGCAAACTCCAACCGACCTGCAGCTGAGGGACCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp AACTGTCAGGTCCCTCAGCTGCAGGTCGGTTGGAGTTaGCTGGAGGTCCACCCCAGACCCTGTTTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: NCQVPQLQVGWS*LEVHPRPCFPG
Trigger: CCCAGGAAAACAGGGTCTGGGGTGGACCTCCAGCAAACTCCAACCGACCTGCAGCTGAGGGACCTGACAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS TCA 72 bp GCCACAGAGATGGAGTCTAGAGGCAGTAGGCCTTACTaGGCTGCAGTGGGCTCTGCCCAGTTCGAACTTCCC +
Preference number: 6 (lower is better)
Translates to: ATEMESRGSRPY*AAVGSAQFELP
Trigger: GGGAAGTTCGAACTGGGCAGAGCCCACTGCAGCTCAGTAAGGCCTACTGCCTCTAGACTCCATCTCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp CTCTGGTCACAGCTGGCTCCCAGAAGAAGCTTCAAATaGCAGAAAAGCTTGGAGCAGCTGCTGGGTCCCGCC +
Preference number: 6 (lower is better)
Translates to: LWSQLAPRRSFK*QKSLEQLLGPA
Trigger: GGCGGGACCCAGCAGCTGCTCCAAGCTTTTCTGCCATTTGAAGCTTCTTCTGGGAGCCAGCTGTGACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461972.5
ENST00000486967.5
ENST00000613899.4
CDS CAA 72 bp CAGTGGGCTCTGCCCAGTTCGAACTTCCCGGCTGCTTaGTTTACCTACTCAAGCCTCAGCAACAGCGGACGC +
Preference number: 6 (lower is better)
Translates to: QWALPSSNFPAA*FTYSSLSNSGR
Trigger: GCGTCCGCTGTTGCTGAGGCTTGAGTAGGTAAACAAAGCAGCCGGGAAGTTCGAACTGGGCAGAGCCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp CCTTCTAACTGTCAGGTCCCTCAGCTGCAGGTCGGTTaGAGTTTGCTGGAGGTCCACCCCAGACCCTGTTTT +
Preference number: 6 (lower is better)
Translates to: PSNCQVPQLQVG*SLLEVHPRPCF
Trigger: AAAACAGGGTCTGGGGTGGACCTCCAGCAAACTCCAACCGACCTGCAGCTGAGGGACCTGACAGTTAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp CCTGGGCAACGTAGCAAGACCGTATATCCGGATGGCTaGAGCTATTCCTCTGGTCACAGCTGGCTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: PGQRSKTVYPDG*SYSSGHSWLPE
Trigger: TTCTGGGAGCCAGCTGTGACCAGAGGAATAGCTCCAGCCATCCGGATATACGGTCTTGCTACGTTGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461972.5
CDS GCA 72 bp CCCGCCGAGCCAGGCATGGGAGAGAATCTCCTTGTCTaGCGGTGGCTAAGATCTTGGGAAAAGTGCAGTATT +
Preference number: 6 (lower is better)
Translates to: PAEPGMGENLLV*RWLRSWEKCSI
Trigger: AATACTGCACTTTTCCCAAGATCTTAGCCACCGGCAGACAAGGAGATTCTCTCCCATGCCTGGCTCGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp GCTGCCTTTTGTTCAGCTATGCCCTGGCCACAGAGATaGAGTCTAGAGGCAGTAGGCCTTACTGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: AAFCSAMPWPQR*SLEAVGLTELQ
Trigger: CTGCAGCTCAGTAAGGCCTACTGCCTCTAGACTCCATCTCTGTGGCCAGGGCATAGCTGAACAAAAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp TTACCTCAGTCGGAAATGCAGAAATCACCTGTCTTCTaGGTCGATCACGCTGGGAGCTGCAGACTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LPQSEMQKSPVF*VDHAGSCRLEL
Trigger: CAGCTCCAGTCTGCAGCTCCCAGCGTGATCGACGCAGAAGACAGGTGATTTCTGCATTTCCGACTGAGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp AAACCTCAGTCGGAAATGCAGAAATCACCTGTCTTCTaGGTCGATCACGCTGGGAGCTGCAGACTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: KPQSEMQKSPVF*VDHAGSCRLEL
Trigger: CAGCTCCAGTCTGCAGCTCCCAGCGTGATCGACGCAGAAGACAGGTGATTTCTGCATTTCCGACTGAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613899.4
CDS TCA 72 bp GGCAGTCTGTCCGTTCTCAGAGCTCAAACACCGTGCTaGGAGAACCAATGCTCTCTTCAGAGCTGTCAGACA +
Preference number: 6 (lower is better)
Translates to: GSLSVLRAQTPC*ENQCSLQSCQT
Trigger: TGTCTGACAGCTCTGAAGAGAGCATTGGTTCTCTCAGCACGGTGTTTGAGCTCTGAGAACGGACAGACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp GAGCCAGGCATGGGAGAGAATCTCCTTGTCTGCCGGTaGCTAAGATCTTGGGAAAAGTGCAGTATTTGGGCA +
Preference number: 6 (lower is better)
Translates to: EPGMGENLLVCR*LRSWEKCSIWA
Trigger: TGCCCAAATACTGCACTTTTCCCAAGATCTTAGCCACCGGCAGACAAGGAGATTCTCTCCCATGCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp GGGAGAGAATCTCCTTGTCTGCCGGTGGCTAAGATCTaGGGAAAAGTGCAGTATTTGGGCAGGAGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: GRESPCLPVAKI*GKVQYLGRSVP
Trigger: TGGGACACTCCTGCCCAAATACTGCACTTTTCCCAAGATCTTAGCCACCGGCAGACAAGGAGATTCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 90 bp TCTCCTTGTCTGCCGGTGGCTAAGATCTTGGGAAAAGTGCAGTATTaGGGCAGGAGTGTCCCATTTTTCCAGGTAGTCTGTCACGGCTTC +
Preference number: 6 (lower is better)
Translates to: SPCLPVAKILGKVQY*GRSVPFFQVVCHGF
Trigger: GAAGCCGTGACAGACTACCTGGAAAAATGGGACACTCCTGCCCAAATACTGCACTTTTCCCAAGATCTTAGCCACCGGCAGACAAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS TCA 72 bp ATCCGTGGGCTGCACCCACTGTCAAACCAGTCCCAGTaGGATGAATCAGTTACCTCAGTCGGAAATGCAGAA +
Preference number: 6 (lower is better)
Translates to: IRGLHPLSNQSQ*DESVTSVGNAE
Trigger: TTCTGCATTTCCGACTGAGGTAACTGATTCATCTCACTGGGACTGGTTTGACAGTGGGTGCAGCCCACGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp CTCCTTGTCTGCCGGTGGCTAAGATCTTGGGAAAAGTaGAGTATTTGGGCAGGAGTGTCCCATTTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: LLVCRWLRSWEK*SIWAGVSHFSR
Trigger: CCTGGAAAAATGGGACACTCCTGCCCAAATACTGCACTTTTCCCAAGATCTTAGCCACCGGCAGACAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp AATGCAGAAATCACCTGTCTTCTGCGTCGATCACGCTaGGAGCTGCAGACTGGAGCTGTTCCGGTTGTTAAA +
Preference number: 6 (lower is better)
Translates to: NAEITCLLRRSR*ELQTGAVPVVK
Trigger: TTTAACAACCGGAACAGCTCCAGTCTGCAGCTCCCAGCGTGATCGACGCAGAAGACAGGTGATTTCTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461972.5
ENST00000469867.1
ENST00000613899.4
CDS CCA 72 bp GTCAAAGTCATTCTCCATCCAGCTTTGTCTCTTTGCTaGCGAGGAGTTGCGATCCTTTGGAGGAGAAGAGGC +
Preference number: 6 (lower is better)
Translates to: VKVILHPALSLC*RGVAILWRRRG
Trigger: GCCTCTTCTCCTCCAAAGGATCGCAACTCCTCGCCAGCAAAGAGACAAAGCTGGATGGAGAATGACTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS TCA 72 bp AAAGGGGCTTGGGCTCCAACCATTCTTTTGAGCTCTTaGGCTTGGGAAGTGTGCCAGTTACCAGATCATCAC +
Preference number: 6 (lower is better)
Translates to: KGAWAPTILLSS*AWEVCQLPDHH
Trigger: GTGATGATCTGGTAACTGGCACACTTCCCAAGCTCAAGAGCTCAAAAGAATGGTTGGAGCCCAAGCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611127.4
ENST00000615135.4
ENST00000615575.5
CDS GCA 72 bp CAGACAGGGACCTTTAAGTCTGCAAAAGTTGTCTGCTaGCTTTTGTTCAGCTATGCCCTGGCCACAGAGATG +
Preference number: 6 (lower is better)
Translates to: QTGTFKSAKVVC*LLFSYALATEM
Trigger: CATCTCTGTGGCCAGGGCATAGCTGAACAAAAGGCAGCAGACAACTTTTGCAGACTTAAAGGTCCCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp TGTCAGACAGGGACCTTTAAGTCTGCAAAAGTTGTCTaGTGCCTTTTGTTCAGCTATGCCCTGGCCACAGAG +
Preference number: 6 (lower is better)
Translates to: CQTGTFKSAKVV*CLLFSYALATE
Trigger: CTCTGTGGCCAGGGCATAGCTGAACAAAAGGCAGCAGACAACTTTTGCAGACTTAAAGGTCCCTGTCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp AAATCACCTGTCTTCTGCGTCGATCACGCTGGGAGCTaGAGACTGGAGCTGTTCCGGTTGTTAAATTATTGG +
Preference number: 6 (lower is better)
Translates to: KSPVFCVDHAGS*RLELFRLLNYW
Trigger: CCAATAATTTAACAACCGGAACAGCTCCAGTCTGCAGCTCCCAGCGTGATCGACGCAGAAGACAGGTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461972.5
CDS CAA 72 bp CTGCCGGTGGCTAAGATCTTGGGAAAAGTGCAGTATTaGGGCAGGAGTGTCCCATTTTTCCAGGTAGTCTGT +
Preference number: 6 (lower is better)
Translates to: LPVAKILGKVQY*GRSVPFFQVVC
Trigger: ACAGACTACCTGGAAAAATGGGACACTCCTGCCCAAATACTGCACTTTTCCCAAGATCTTAGCCACCGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp GGGACCTTTAAGTCTGCAAAAGTTGTCTGCTGCCTTTaGTTCAGCTATGCCCTGGCCACAGAGATGGAGTCT +
Preference number: 6 (lower is better)
Translates to: GTFKSAKVVCCL*FSYALATEMES
Trigger: AGACTCCATCTCTGTGGCCAGGGCATAGCTGAACAAAAGGCAGCAGACAACTTTTGCAGACTTAAAGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp AGAGCTGTCAGACAGGGACCTTTAAGTCTGCAAAAGTaGTCTGCTGCCTTTTGTTCAGCTATGCCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: RAVRQGPLSLQK*SAAFCSAMPWP
Trigger: TGGCCAGGGCATAGCTGAACAAAAGGCAGCAGACAACTTTTGCAGACTTAAAGGTCCCTGTCTGACAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp GGCTTGGGCTCCAACCATTCTTTTGAGCTCTTGAGCTaGGGAAGTGTGCCAGTTACCAGATCATCACTGTCT +
Preference number: 6 (lower is better)
Translates to: GLGSNHSFELLS*GSVPVTRSSLS
Trigger: AGACAGTGATGATCTGGTAACTGGCACACTTCCCAAGCTCAAGAGCTCAAAAGAATGGTTGGAGCCCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611127.4
ENST00000615135.4
ENST00000615575.5
CDS CAA 72 bp CAAAGGGGCTTGGGCTCCAACCATTCTTTTGAGCTCTaGAGCTTGGGAAGTGTGCCAGTTACCAGATCATCA +
Preference number: 6 (lower is better)
Translates to: QRGLGSNHSFEL*SLGSVPVTRSS
Trigger: TGATGATCTGGTAACTGGCACACTTCCCAAGCTCAAGAGCTCAAAAGAATGGTTGGAGCCCAAGCCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611127.4
ENST00000615135.4
ENST00000615575.5
CDS GCA 72 bp CCAGACCCTGTTTTCCTGGGTATCACCAGCGGAGGCTaGAGAACAGCAAATATTGCAGAACAGCAAATACTA +
Preference number: 6 (lower is better)
Translates to: PDPVFLGITSGG*RTANIAEQQIL
Trigger: TAGTATTTGCTGTTCTGCAATATTTGCTGTTCTGCAGCCTCCGCTGGTGATACCCAGGAAAACAGGGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp CTTGTCAAAGTCATTCTCCATCCAGCTTTGTCTCTTTaGTGGCGAGGAGTTGCGATCCTTTGGAGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: LVKVILHPALSL*WRGVAILWRRR
Trigger: TCTTCTCCTCCAAAGGATCGCAACTCCTCGCCAGCAAAGAGACAAAGCTGGATGGAGAATGACTTTGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp CTCTGGTCACAGCTGGCTCCCAGAAGAAGCTTCAAATaGCAGAAAAGCTTGGAGCAGCTGTATATTAGGAAG +
Preference number: 6 (lower is better)
Translates to: LWSQLAPRRSFK*QKSLEQLYIRK
Trigger: CTTCCTAATATACAGCTGCTCCAAGCTTTTCTGCCATTTGAAGCTTCTTCTGGGAGCCAGCTGTGACCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460686.1
CDS CAA 72 bp ACTTGTCAAAGTCATTCTCCATCCAGCTTTGTCTCTTaGCTGGCGAGGAGTTGCGATCCTTTGGAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: TCQSHSPSSFVS*LARSCDPLEEK
Trigger: CTTCTCCTCCAAAGGATCGCAACTCCTCGCCAGCAAAGAGACAAAGCTGGATGGAGAATGACTTTGACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp TTCTGTCGACTTGTCAAAGTCATTCTCCATCCAGCTTaGTCTCTTTGCTGGCGAGGAGTTGCGATCCTTTGG +
Preference number: 6 (lower is better)
Translates to: FCRLVKVILHPA*SLCWRGVAILW
Trigger: CCAAAGGATCGCAACTCCTCGCCAGCAAAGAGACAAAGCTGGATGGAGAATGACTTTGACAAGTCGACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS TCA 72 bp CTGATACCCTTTCTTCCACTTGATCGAATCGGCTATTaGAGGTTGTGCATGTGTCACGAAGTTCTTGTGCCG +
Preference number: 6 (lower is better)
Translates to: LIPFLPLDRIGY*RLCMCHEVLVP
Trigger: CGGCACAAGAACTTCGTGACACATGCACAACCTTCAATAGCCGATTCGATCAAGTGGAAGAAAGGGTATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp AGAAAAATACCCTTCAGAGATGGCCTCTTTGGCACTTaGATTATTTCCCTCCTGATAGCACAGCGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: RKIPFRDGLFGT*IISLLIAQRFS
Trigger: AGAGAACCGCTGTGCTATCAGGAGGGAAATAATCCAAGTGCCAAAGAGGCCATCTCTGAAGGGTATTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000611127.4
ENST00000611917.1
ENST00000613899.4
ENST00000615135.4
ENST00000615575.5
CDS CAA 72 bp ATGGGCGTCCCTTTGTGGGTAACTCAACCTTTCTCTTaGGCTGCCCTTAACACTTTTTCCTTCATTTCAACC +
Preference number: 6 (lower is better)
Translates to: MGVPLWVTQPFS*AALNTFSFIST
Trigger: GGTTGAAATGAAGGAAAAAGTGTTAAGGGCAGCCAAAGAGAAAGGTTGAGTTACCCACAAAGGGACGCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 90 bp GAGAAGTTTGTTTTTACCAACCTTCTGAAGCCTACTTCTGTCGACTaGTCAAAGTCATTCTCCATCCAGCTTTGTCTCTTTGCTGGCGAG +
Preference number: 6 (lower is better)
Translates to: EKFVFTNLLKPTSVD*SKSFSIQLCLFAGE
Trigger: CTCGCCAGCAAAGAGACAAAGCTGGATGGAGAATGACTTTGACAAGTCGACAGAAGTAGGCTTCAGAAGGTTGGTAAAAACAAACTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp CCCCATCACTTCCAGGTACACCAATCAAACATAGATTaGGTCTTTTCACATAGTCCCATTTGTCTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: PHHFQVHQSNID*VFSHSPICLGG
Trigger: GCCTCCAAGACAAATGGGACTATGTGAAAAGACCAAATCTATGTTTGATTGGTGTACCTGGAAGTGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 90 bp GATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTaGTTCCTTTCCATGTTTAGTGCTTCCTTTAGGAGCTCTCGTAAG +
Preference number: 6 (lower is better)
Translates to: DGLYNLACFCSGWYQ*FLSMFSASFRSSRK
Trigger: CTTACGAGAGCTCCTAAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp AACCTTGGTGAATCTGACAATTATGTGTCTTGGGGTTaGTCTTCTCAAGGAGTATCTTTGTGGTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: NLGESDNYVSWG*SSQGVSLWCSL
Trigger: CAGAGAACACCACAAAGATACTCCTTGAGAAGAGCAACCCCAAGACACATAATTGTCAGATTCACCAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp GATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTaGTACCAGTTGTTCCTTTCCATGTTTAGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: DGLYNLACFCSG*YQLFLSMFSAS
Trigger: GGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS TCA 72 bp CCTTTAGCTCGGAGAAGTTTGTTTTTACCAACCTTCTaGAGCCTACTTCTGTCGACTTGTCAAAGTCATTCT +
Preference number: 6 (lower is better)
Translates to: PLARRSLFLPTF*SLLLSTCQSHS
Trigger: AGAATGACTTTGACAAGTCGACAGAAGTAGGCTTCAGAAGGTTGGTAAAAACAAACTTCTCCGAGCTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp CATAGCATCGATGGTCTTTACAATTTGGCATGTTTTTaGAGTGGCTGGTACCAGTTGTTCCTTTCCATGTTT +
Preference number: 6 (lower is better)
Translates to: HSIDGLYNLACF*SGWYQLFLSMF
Trigger: AAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATCGATGCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp CAGCTCACAATTCAAGCAATCATCCATATTTCAGTATaGAGCAGAAGTGCTGTTCGCATACTCCCATTTCAT +
Preference number: 6 (lower is better)
Translates to: QLTIQAIIHISV*SRSAVRILPFH
Trigger: ATGAAATGGGAGTATGCGAACAGCACTTCTGCTGCATACTGAAATATGGATGATTGCTTGAATTGTGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486967.5
CDS CCA 72 bp ATCTACCTTTGGTCTTTGATGTTGGTGACCTACAGATaGGGTTTTGGTGTAGATGACCTTTTTGGTGATGTT +
Preference number: 6 (lower is better)
Translates to: IYLWSLMLVTYR*GFGVDDLFGDV
Trigger: AACATCACCAAAAAGGTCATCTACACCAAAACCCCATCTGTAGGTCACCAACATCAAAGACCAAAGGTAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CCA 72 bp CATTTCAACCTTGGTGAATCTGACAATTATGTGTCTTaGGGTTGCTCTTCTCAAGGAGTATCTTTGTGGTGT +
Preference number: 6 (lower is better)
Translates to: HFNLGESDNYVS*GCSSQGVSLWC
Trigger: ACACCACAAAGATACTCCTTGAGAAGAGCAACCCCAAGACACATAATTGTCAGATTCACCAAGGTTGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp GTTTTTACCAACCTTCTGAAGCCTACTTCTGTCGACTaGTCAAAGTCATTCTCCATCCAGCTTTGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: VFTNLLKPTSVD*SKSFSIQLCLF
Trigger: AAAGAGACAAAGCTGGATGGAGAATGACTTTGACAAGTCGACAGAAGTAGGCTTCAGAAGGTTGGTAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp TTGGCTGCCCTTAACACTTTTTCCTTCATTTCAACCTaGGTGAATCTGACAATTATGTGTCTTGGGGTTGCT +
Preference number: 6 (lower is better)
Translates to: LAALNTFSFIST*VNLTIMCLGVA
Trigger: AGCAACCCCAAGACACATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAAGTGTTAAGGGCAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp ATGCAGTTTCTTCATAGCATCGATGGTCTTTACAATTaGGCATGTTTTTGCAGTGGCTGGTACCAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: MQFLHSIDGLYN*ACFCSGWYQLF
Trigger: GAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATCGATGCTATGAAGAAACTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 90 bp TTCCATTCTCCCCATCACTTCCAGGTACACCAATCAAACATAGATTaGGTCTTTTCACATAGTCCCATTTGTCTTGGAGGCTTTGTTCAT +
Preference number: 6 (lower is better)
Translates to: FHSPHHFQVHQSNID*VFSHSPICLGGFVH
Trigger: ATGAACAAAGCCTCCAAGACAAATGGGACTATGTGAAAAGACCAAATCTATGTTTGATTGGTGTACCTGGAAGTGATGGGGAGAATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS GCA 72 bp TCAAGCAATCATCCATATTTCAGTATGCAGCAGAAGTaGTGTTCGCATACTCCCATTTCATCACAAAGAACA +
Preference number: 6 (lower is better)
Translates to: SSNHPYFSMQQK*CSHTPISSQRT
Trigger: TGTTCTTTGTGATGAAATGGGAGTATGCGAACAGCACTTCTGCTGCATACTGAAATATGGATGATTGCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486967.5
CDS CAA 90 bp GTTTGGCTAGATATGAAATTCTGGGTTGAAAATTCTTTAAGAATGTaGAATATTGGCCCCCACTCTCTTCTTGTAGGGTTTCTGCAGAGA +
Preference number: 6 (lower is better)
Translates to: VWLDMKFWVENSLRM*NIGPHSLLVGFLQR
Trigger: TCTCTGCAGAAACCCTACAAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAATTTTCAACCCAGAATTTCATATCTAGCCAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp GATATGAAATTCTGGGTTGAAAATTCTTTAAGAATGTaGAATATTGGCCCCCACTCTCTTCTTGTAGGGTTT +
Preference number: 6 (lower is better)
Translates to: DMKFWVENSLRM*NIGPHSLLVGF
Trigger: AAACCCTACAAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAATTTTCAACCCAGAATTTCATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461972.5
ENST00000469867.1
CDS CAA 72 bp AGGGTCATGAAATGGTGGGATGGTAACCTTTTATCATaGGCAACAAATATTGTCAGTAGTTTTTCTCAAAGT +
Preference number: 6 (lower is better)
Translates to: RVMKWWDGNLLS*ATNIVSSFSQS
Trigger: ACTTTGAGAAAAACTACTGACAATATTTGTTGCCAATGATAAAAGGTTACCATCCCACCATTTCATGACCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486967.5