RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM227B (Homo sapiens)

Ensembl gene IDs: ENSG00000166262

Ensembl transcript IDs: ENST00000299338.11, ENST00000557892.1, ENST00000558579.5, ENST00000558594.5, ENST00000558615.5, ENST00000558862.2, ENST00000559351.1, ENST00000559573.3, ENST00000559905.5, ENST00000560246.1, ENST00000560557.1, ENST00000561064.5, ENST00000561116.5, ENST00000561319.5

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTaGACAGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTA +
Preference number: 1 (lower is better)
Translates to: FGAQGSRLTGAGWGG*TVSMVPADKLPSFL
Trigger: TAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACTGTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CCA 90 bp TTTAGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATaGGGAGGCTGCACAGTATCAATGGTACCTGCGGACAAGCTGCCC +
Preference number: 1 (lower is better)
Translates to: FRKFGAQGSRLTGAG*GGCTVSMVPADKLP
Trigger: GGGCAGCTTGTCCGCAGGTACCATTGATACTGTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CCA 90 bp AGTCCAATAATCAGACTAGCTCCAGAAGGCACAGGGAAGGTGGTGTaGACCTCTAGGGACTGCCCTCTGCTTTGTGGAAAGGCTTGGTTA +
Preference number: 1 (lower is better)
Translates to: SPIIRLAPEGTGKVV*TSRDCPLLCGKAWL
Trigger: TAACCAAGCCTTTCCACAAAGCAGAGGGCAGTCCCTAGAGGTCCACACCACCTTCCCTGTGCCTTCTGGAGCTAGTCTGATTATTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 90 bp GCCCAGCTTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTaGTGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTACCAA +
Preference number: 1 (lower is better)
Translates to: AQLSSKCAQSLLPEE*WKLSTGEAKFVCYQ
Trigger: TTGGTAGCAAACAAACTTTGCTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAAGCTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 90 bp GGTAACCATCCCACCCTCATTTTAGCCCTCGTATTCACTGGCTATTaGTCTAATTACCTCCCAACACCTGCAGTTTTTCACTGTTTGGTT +
Preference number: 1 (lower is better)
Translates to: GNHPTLILALVFTGY*SNYLPTPAVFHCLV
Trigger: AACCAAACAGTGAAAAACTGCAGGTGTTGGGAGGTAATTAGATCAATAGCCAGTGAATACGAGGGCTAAAATGAGGGTGGGATGGTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558579.5
3UTR TCA 90 bp TATTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTaGCTTACCACTTGGAGTCAAAACCAGGGACTAGATTTAGATACA +
Preference number: 1 (lower is better)
Translates to: YYSGLLPVMKWEEYC*LTTWSQNQGLDLDT
Trigger: TGTATCTAAATCTAGTCCCTGGTTTTGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 90 bp TGGCTACTTTATGGAATCAATATTACAGTGGGTTATTGCCAGTCATaGAATGGGAGGAGTACTGTTGACTTACCACTTGGAGTCAAAACC +
Preference number: 1 (lower is better)
Translates to: WLLYGINITVGYCQS*NGRSTVDLPLGVKT
Trigger: GGTTTTGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAATATTGATTCCATAAAGTAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 90 bp GGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTaGTGTCAACTTCTGAGTCCAATAATCAGACTAGCTCCAGAAGGC +
Preference number: 1 (lower is better)
Translates to: GPLYSCCHPNQIYLI*CQLLSPIIRLAPEG
Trigger: GCCTTCTGGAGCTAGTCTGATTATTGGACTCAGAAGTTGACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CCA 90 bp CTATACAACTCTTCAAGTGGCTACTTTATGGAATCAATATTACAGTaGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTAC +
Preference number: 1 (lower is better)
Translates to: LYNSSSGYFMESILQ*VIASHEMGGVLLTY
Trigger: GTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAATATTGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CCA 90 bp TTGGTTAATTTTCCATTAGAGATTCAACCAACCACCGACCCAACCTaGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTGAA +
Preference number: 1 (lower is better)
Translates to: LVNFPLEIQPTTDPT*SLITRFLLISLFSE
Trigger: TTCACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGTGGTTGGTTGAATCTCTAATGGAAAATTAACCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR GCA 90 bp GAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACAGTATCAATGGTACCTaGGGACAAGCTGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: EVWGSRVTTYWSRMGRLHSINGT*GQAAQL
Trigger: AAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT...GTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR CCA 90 bp CCAATAATCAGACTAGCTCCAGAAGGCACAGGGAAGGTGGTGTGGACCTCTAGGCTGGAGGTGGGGCTTTaGTTTTGCTTGAGGCCTGAA +
Preference number: 2 (lower is better)
Translates to: PIIRLAPEGTGKVVWTSRLEVGL*FCLRPE
Trigger: TTCAGGCCTCAAGCAAAACCAAAGCCCCACCTCCAG...CCTAGAGGTCCACACCACCTTCCCTGTGCCTTCTGGAGCTAGTCTGATTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR CCA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACCTTACTGGAGCAGGATaGGGAGGCTGCACAGTATCA +
Preference number: 2 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHLTGAG*GGCTVS
Trigger: TGATACTGTGCAGCCTCCCCATCCTGCTCCAGTAAG...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR CCA 90 bp CACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTGTTTGCTACCAAACCTaGAGGTGGGGCTTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: HKAYYQRSDGSLAPEKQSVCYQT*RWGFGF
Trigger: AAAACCAAAGCCCCACCTCCAGGTTTGGTAGCAAAC...ACTTTGCTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR TCA 90 bp TGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATATATTCCAGGCTAAAACATCCTaGGCTGACAGAGCAGGAACA +
Preference number: 2 (lower is better)
Translates to: CTLATSGSQSSNTEFNIFQAKTS*ADRAGT
Trigger: TGTTCCTGCTCTGTCAGCTCAGGATGTTTTAGCCTG...GAATATATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558579.5
3UTR-3UTR CCA 90 bp GATTTACGTGTAAGCTTGCTATACAACTCTTCAAGTGGCTACTTTATGGAATCAAGGGTCACGACTTACTaGAGCAGGATGGGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: DLRVSLLYNSSSGYFMESRVTTY*SRMGRL
Trigger: CAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCT...TGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR GCA 90 bp GTTTTACCAGGTAACCATCCCACCCTCATTTTAGCCCTCGTATTCACTGGCTATTTACCTCCCAACACCTaGAGTTTTTCACTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: VLPGNHPTLILALVFTGYLPPNT*SFSLFG
Trigger: ACCAAACAGTGAAAAACTGCAGGTGTTGGGAGGTAA...ATAGCCAGTGAATACGAGGGCTAAAATGAGGGTGGGATGGTTACCTGGTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558579.5
3UTR-3UTR CCA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCAAGGCACAGGGAAGGTaGTGTGGACCTCTAGGGACT +
Preference number: 2 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVKAQGR*CGPLGT
Trigger: AGTCCCTAGAGGTCCACACCACCTTCCCTGTGCCTT...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR CCA 90 bp ACAGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAGCCAAGATCATGCTTaGACAGATCTTTTAAGAATA +
Preference number: 2 (lower is better)
Translates to: TVSMVPADKLPSFLANVHSQDHA*TDLLRI
Trigger: TATTCTTAAAAGATCTGTCCAAGCATGATCTTGGCT...GTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR GCA 90 bp TTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCAGAAGCAAAGTTTGTTTaGTACCAAACCTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: FLANVHKAYYQRSDGSLAEAKFV*YQTWRW
Trigger: CCACCTCCAGGTTTGGTAGCAAACAAACTTTGCTTC...TGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CAA 90 bp ATATTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTaGACTTACCACTTGGAGTCAAAACCAGGGACTAGATTTAGATAC +
Preference number: 2 (lower is better)
Translates to: ILQWVIASHEMGGVL*TYHLESKPGTRFRY
Trigger: GTATCTAAATCTAGTCCCTGGTTTTGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR TCA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCTTATTACCAGAGGAGTaGTGGAAGCTTAGCACCGGA +
Preference number: 2 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVLLPEE*WKLSTG
Trigger: TCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAA...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR TCA 90 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTTGGGAGGAGTACTGTTaGCTTACCACTTGGAGTCAA +
Preference number: 2 (lower is better)
Translates to: TDPTWSLITRFLLISLFSWEEYC*LTTWSQ
Trigger: TTGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCA...ACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR TCA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCGGTTATTGCCAGTCATaGAATGGGAGGAGTACTGTT +
Preference number: 2 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVGYCQS*NGRSTV
Trigger: AACAGTACTCCTCCCATTTCATGACTGGCAATAACC...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR GCA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCTGGCAGGACTTTCTGTaGCACAGTAAATTAATCTTC +
Preference number: 2 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVWQDFL*HSKLIF
Trigger: GAAGATTAATTTACTGTGGCACAGAAAGTCCTGCCA...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR TCA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTAAATGTCTGGGTAGCTaGGTAAGTTCATTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLIKCLGS*VSSFAL
Trigger: CAAAGCAAATGAACTTACTCAGCTACCCAGACATTT...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000561116.5
3UTR-3UTR GCA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCCTTCTGATTCAGGGTTaGCTACATTTCTTTTACCAT +
Preference number: 2 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVLLIQG*LHFFYH
Trigger: ATGGTAAAAGAAATGTAGGCAACCCTGAATCAGAAG...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR GCA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTCTGAGTAAGTTCATTTaGTTTGAATCCTGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLILSKFI*FESCEA
Trigger: AGCTTCACAGGATTCAAAGCAAATGAACTTACTCAG...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000561116.5
3UTR GCA 72 bp CAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTaGACAGTATCAATGGTACCTGCGGACAAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: QGSRLTGAGWGG*TVSMVPADKLP
Trigger: GGGCAGCTTGTCCGCAGGTACCATTGATACTGTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CCA 72 bp TTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATaGGGAGGCTGCACAGTATCAATGGTACCTGCGGAC +
Preference number: 3 (lower is better)
Translates to: FGAQGSRLTGAG*GGCTVSMVPAD
Trigger: GTCCGCAGGTACCATTGATACTGTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR CAA 90 bp GAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACCCGGAGAAGCAAAGTTaGTTTGCTACCAAACCTGGA +
Preference number: 3 (lower is better)
Translates to: EVWGSRVTTYWSRMGRLHPEKQS*FATKPG
Trigger: TCCAGGTTTGGTAGCAAACAAACTTTGCTTCTCCGG...GTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR CAA 90 bp CCAATAATCAGACTAGCTCCAGAAGGCACAGGGAAGGTGGTGTGGACCTCTAGGAGAAGCAAAGTTTGTTaGCTACCAAACCTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: PIIRLAPEGTGKVVWTSRRSKVC*LPNLEV
Trigger: CACCTCCAGGTTTGGTAGCAAACAAACTTTGCTTCT...CCTAGAGGTCCACACCACCTTCCCTGTGCCTTCTGGAGCTAGTCTGATTATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR GCA 72 bp AATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTaGCCGAAGTCATACTGGTCATTAGTGGTCCAACAC +
Preference number: 3 (lower is better)
Translates to: NVAAETLEQQVT*PKSYWSLVVQH
Trigger: GTGTTGGACCACTAATGACCAGTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
3UTR-3UTR CAA 90 bp GGTTACATGCCAAGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACGTAAGTTCATTTGCTTaGAATCCTGTGAAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: GYMPSQCTLATSGSQSSNVSSFA*NPVKLQ
Trigger: TTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC...GTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCTTGGCATGTAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
3UTR TCA 72 bp GGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTaGCTTACCACTTGGAGTCAAAACCAGGGACTAGAT +
Preference number: 3 (lower is better)
Translates to: GLLPVMKWEEYC*LTTWSQNQGLD
Trigger: ATCTAGTCCCTGGTTTTGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 72 bp CCCACCCTCATTTTAGCCCTCGTATTCACTGGCTATTaGTCTAATTACCTCCCAACACCTGCAGTTTTTCAC +
Preference number: 3 (lower is better)
Translates to: PTLILALVFTGY*SNYLPTPAVFH
Trigger: GTGAAAAACTGCAGGTGTTGGGAGGTAATTAGATCAATAGCCAGTGAATACGAGGGCTAAAATGAGGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558579.5
3UTR-3UTR CAA 90 bp ATAGGGCCTTTCACTTTGGTTGAAATCTTAGGTTTGAAACTGTGCCTGGTTTACACTGTTTTAGGAAGTTaGGGGCTCAAGGGTCACGAC +
Preference number: 3 (lower is better)
Translates to: IGPFTLVEILGLKLCLVYTVLGS*GLKGHD
Trigger: GTCGTGACCCTTGAGCCCCAAACTTCCTAAAACAGT...GTAAACCAGGCACAGTTTCAAACCTAAGATTTCAACCAAAGTGAAAGGCCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR CAA 90 bp GTTTTACCAGGTAACCATCCCACCCTCATTTTAGCCCTCGTATTCACTGGCTATAATTCCCACAGACACTaGAAGACTCAAAAGAAACAC +
Preference number: 3 (lower is better)
Translates to: VLPGNHPTLILALVFTGYNSHRH*KTQKKH
Trigger: GTGTTTCTTTTGAGTCTTCAAGTGTCTGTGGGAATT...ATAGCCAGTGAATACGAGGGCTAAAATGAGGGTGGGATGGTTACCTGGTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558579.5
3UTR TCA 72 bp TCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTaGTGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTT +
Preference number: 3 (lower is better)
Translates to: SSKCAQSLLPEE*WKLSTGEAKFV
Trigger: AACAAACTTTGCTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 72 bp ATTAGACCAATACACCAATTTTACAAATGTAGCAGCTaGGACTCTGGAACAGCAGGTAACTTGCCCGAAGTC +
Preference number: 3 (lower is better)
Translates to: IRPIHQFYKCSS*DSGTAGNLPEV
Trigger: GACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAAATTGGTGTATTGGTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
3UTR TCA 72 bp TATGGAATCAATATTACAGTGGGTTATTGCCAGTCATaGAATGGGAGGAGTACTGTTGACTTACCACTTGGA +
Preference number: 3 (lower is better)
Translates to: YGINITVGYCQS*NGRSTVDLPLG
Trigger: TCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAATATTGATTCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 72 bp ATCTGTGTACATTGTGATAGGGCCTTTCACTTTGGTTaGAATCTTAGGTTTGAAACTGTGCCTGGTTTACAG +
Preference number: 3 (lower is better)
Translates to: ICVHCDRAFHFG*NLRFETVPGLQ
Trigger: CTGTAAACCAGGCACAGTTTCAAACCTAAGATTTCAACCAAAGTGAAAGGCCCTATCACAATGTACACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 72 bp TATTTCAGGATCAAAAATGAGCAGGCTAAAACATCCTaGGCTGACAGAGCAGGAACAGACAAGAAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: YFRIKNEQAKTS*ADRAGTDKKEK
Trigger: TTTTTCCTTCTTGTCTGTTCCTGCTCTGTCAGCTCAGGATGTTTTAGCCTGCTCATTTTTGATCCTGAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558579.5
3UTR CCA 72 bp TCTTCAAGTGGCTACTTTATGGAATCAATATTACAGTaGGTTATTGCCAGTCATGAAATGGGAGGAGTACTG +
Preference number: 3 (lower is better)
Translates to: SSSGYFMESILQ*VIASHEMGGVL
Trigger: CAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAATATTGATTCCATAAAGTAGCCACTTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR CAA 90 bp GTTAATTTTCCATTAGAGATTCAACCAACCACCGACCCAACCTGGAGTTTAATAGAGCCAAGATCATGCTaGGACAGATCTTTTAAGAAT +
Preference number: 3 (lower is better)
Translates to: VNFPLEIQPTTDPTWSLIEPRSC*DRSFKN
Trigger: ATTCTTAAAAGATCTGTCCAAGCATGATCTTGGCTC...TATTAAACTCCAGGTTGGGTCGGTGGTTGGTTGAATCTCTAATGGAAAATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 72 bp TTTACCATTGCCTGTTTTATCTTAACGCCTCCTTCCTaGTTTACGTGTAAGCTTGCTATACAACTCTTCAAG +
Preference number: 3 (lower is better)
Translates to: FTIACFILTPPS*FTCKLAIQLFK
Trigger: CTTGAAGAGTTGTATAGCAAGCTTACACGTAAATCAGGAAGGAGGCGTTAAGATAAAACAGGCAATGGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 72 bp TTAAATTTTGATTTGTCCTCATTTGGAGTGACCTTCTaGTTCAGGGTTGCCTACATTTCTTTTACCATTGCC +
Preference number: 3 (lower is better)
Translates to: LNFDLSSFGVTF*FRVAYISFTIA
Trigger: GGCAATGGTAAAAGAAATGTAGGCAACCCTGAATCAGAAGGTCACTCCAAATGAGGACAAATCAAAATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CCA 72 bp TTTCCATTAGAGATTCAACCAACCACCGACCCAACCTaGAGTTTAATAACACGCTTTTTGTTGATAAGTTTA +
Preference number: 3 (lower is better)
Translates to: FPLEIQPTTDPT*SLITRFLLISL
Trigger: TAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGTGGTTGGTTGAATCTCTAATGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR CAA 90 bp GATTTACGTGTAAGCTTGCTATACAACTCTTCAAGTGGCTACTTTATGGAATCAAATGTCCTAAAATGTTaGATGACACCTAAAAACCCC +
Preference number: 3 (lower is better)
Translates to: DLRVSLLYNSSSGYFMESNVLKC*MTPKNP
Trigger: GGGGTTTTTAGGTGTCATCAAACATTTTAGGACATT...TGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR-3UTR CAA 90 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTGCCATTGGGGAAAACTaGTATAAGACTGTACATTTT +
Preference number: 3 (lower is better)
Translates to: TDPTWSLITRFLLISLFSAIGEN*YKTVHF
Trigger: AAAATGTACAGTCTTATACAAGTTTTCCCCAATGGC...ACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR TCA 72 bp TATAGTTGTTGTCATCCCAATCAGATATATCTCATCTaGTGTCAACTTCTGAGTCCAATAATCAGACTAGCT +
Preference number: 3 (lower is better)
Translates to: YSCCHPNQIYLI*CQLLSPIIRLA
Trigger: AGCTAGTCTGATTATTGGACTCAGAAGTTGACATCAGATGAGATATATCTGATTGGGATGACAACAACTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp AGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCCGGGAGGAAACTGGGTaGAAGGCTGCGAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: RKFGAQGSRLTGAGWGGCREETG*KAARLE
Trigger: CTCAAGCCTCGCAGCCTTTCACCCAGTTTCCTCCCG...GCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp AGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCCTGCTGCTCCTCCTTTaGCATGTTCGTTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RKFGAQGSRLTGAGWGGCLLLLL*HVRWPA
Trigger: GGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAG...GCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp AGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCCGGGGCCAGCTCTGCTaGTCCTCCTTTGACATGTTC +
Preference number: 4 (lower is better)
Translates to: RKFGAQGSRLTGAGWGGCRGQLC*SSFDMF
Trigger: GAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCG...GCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp GGTTACATGCCAAGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACCCACGGTTGCGCCACTaGACTCCAGCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GYMPSQCTLATSGSQSSNPRLRH*TPAWAT
Trigger: TGTGGCCCAGGCTGGAGTGCAGTGGCGCAACCGTGG...GTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCTTGGCATGTAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR GCA 90 bp TTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCAGGACGAACGCGGCCCTaGCCCTCGCCGGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FTNVAAETLEQQVTCPKSGRTRP*PSPEPL
Trigger: GAGAGGCTCCGGCGAGGGGCAGGGCCGCGTTCGTCC...TGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp GAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACGAATCGGGAGGAAACTaGGTGAAAGGCTGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: EVWGSRVTTYWSRMGRLHESGGN*VKGCEA
Trigger: AGCCTCGCAGCCTTTCACCCAGTTTCCTCCCGATTC...GTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCGCCTGGGCCACAGAGTaGGGCCCCATTCCCCACACC +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGAWATE*GPIPHT
Trigger: GGTGTGGGGAATGGGGCCTCACTCTGTGGCCCAGGC...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR GCA 90 bp CCAATAATCAGACTAGCTCCAGAAGGCACAGGGAAGGTGGTGTGGACCTCTAGGTCCCGGGGCCAGCTCTaGTGCTCCTCCTTTGACATG +
Preference number: 4 (lower is better)
Translates to: PIIRLAPEGTGKVVWTSRSRGQL*CSSFDM
Trigger: CATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGA...CCTAGAGGTCCACACCACCTTCCCTGTGCCTTCTGGAGCTAGTCTGATTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAAAAGGCTGCGAGGCTTaGGGCGGGTCCCGGACGAAC +
Preference number: 4 (lower is better)
Translates to: SINGTCGQAAQLSSKCAQKGCEA*GGSRTN
Trigger: GTTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTT...TTGTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp GGTTACATGCCAAGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACCTGCTGCTCCTCCTTTaGCATGTTCGTTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GYMPSQCTLATSGSQSSNLLLLL*HVRWPA
Trigger: GGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAG...GTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCTTGGCATGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR GCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCCCACGGTTGCGCCACTaGACTCCAGCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGPRLRH*TPAWAT
Trigger: TGTGGCCCAGGCTGGAGTGCAGTGGCGCAACCGTGG...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR TCA 90 bp TTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCAAAAGGCTGCGAGGCTTaGGGCGGGTCCCGGACGAAC +
Preference number: 4 (lower is better)
Translates to: FTNVAAETLEQQVTCPKSKGCEA*GGSRTN
Trigger: GTTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTT...TGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR TCA 90 bp GAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACTGGGAGGAGTACTGTTaGCTTACCACTTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: EVWGSRVTTYWSRMGRLHWEEYC*LTTWSQ
Trigger: TTGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCA...GTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCAGGCAGAGGTTGCAGTaGGCCACGGTTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGRQRLQ*ATVAPL
Trigger: CAGTGGCGCAACCGTGGCTCACTGCAACCTCTGCCT...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CCA 90 bp GAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACGTTTGCTACCAAACCTaGAGGTGGGGCTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: EVWGSRVTTYWSRMGRLHVCYQT*RWGFGF
Trigger: AAAACCAAAGCCCCACCTCCAGGTTTGGTAGCAAAC...GTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp AGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATCGGGAGGAAACTGGGTaGAAGGCTGCGAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SQCTLATSGSQSSNTEFNREETG*KAARLE
Trigger: CTCAAGCCTCGCAGCCTTTCACCCAGTTTCCTCCCG...ATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR TCA 90 bp AGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCGGTTATTGCCAGTCATaGAATGGGAGGAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: RKFGAQGSRLTGAGWGGCGYCQS*NGRSTV
Trigger: AACAGTACTCCTCCCATTTCATGACTGGCAATAACC...GCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACGACACCGCCGCTGATTaGGAGGCTGAGGCGGAACTT +
Preference number: 4 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYDTAAD*EAEAEL
Trigger: AAGTTCCGCCTCAGCCTCTCAATCAGCGGCGGTGTC...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR TCA 90 bp TGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATATATTCGCCTGGGCCACAGAGTaGGGCCCCATTCCCCACACC +
Preference number: 4 (lower is better)
Translates to: CTLATSGSQSSNTEFNIFAWATE*GPIPHT
Trigger: GGTGTGGGGAATGGGGCCTCACTCTGTGGCCCAGGC...GAATATATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR GCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCTCCCGGGGCCAGCTCTaGTGCTCCTCCTTTGACATG +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGSRGQL*CSSFDM
Trigger: CATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGA...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR TCA 90 bp TGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATATATTCAAAGGCTGCGAGGCTTaGGGCGGGTCCCGGACGAAC +
Preference number: 4 (lower is better)
Translates to: CTLATSGSQSSNTEFNIFKGCEA*GGSRTN
Trigger: GTTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTT...GAATATATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR TCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCCTGCTGCTCCTCCTTTaGCATGTTCGTTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGLLLLL*HVRWPA
Trigger: GGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAG...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR GCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCCGGGGCCAGCTCTGCTaGTCCTCCTTTGACATGTTC +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGRGQLC*SSFDMF
Trigger: GAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCG...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR GCA 90 bp TTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATCCCGGGGCCAGCTCTaGTGCTCCTCCTTTGACATG +
Preference number: 4 (lower is better)
Translates to: FTNVAAETLEQQVTCPKSSRGQL*CSSFDM
Trigger: CATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGA...TGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp CCAATAATCAGACTAGCTCCAGAAGGCACAGGGAAGGTGGTGTGGACCTCTAGGAGGGCACTTAGGAATTaGCAGGACTTTCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PIIRLAPEGTGKVVWTSRRALRN*QDFLCH
Trigger: GTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCT...CCTAGAGGTCCACACCACCTTCCCTGTGCCTTCTGGAGCTAGTCTGATTATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp CCAATAATCAGACTAGCTCCAGAAGGCACAGGGAAGGTGGTGTGGACCTCTAGGGGACTGATTCTTCTTTaGAACAGCCCGGCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: PIIRLAPEGTGKVVWTSRGLILL*NSPALR
Trigger: TCTTAAGGCCGGGCTGTTTCAAAGAAGAATCAGTCC...CCTAGAGGTCCACACCACCTTCCCTGTGCCTTCTGGAGCTAGTCTGATTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp GAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACCAGATATATCTCATCTaGTGTCAACTTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: EVWGSRVTTYWSRMGRLHQIYLI*CQLLSP
Trigger: TGGACTCAGAAGTTGACATCAGATGAGATATATCTG...GTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp AGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACTCGATTCTGGAAATaGTTCATGGAACGTTGCATA +
Preference number: 4 (lower is better)
Translates to: RKFGAQGSRLTGAGWGGCTRFWK*FMERCI
Trigger: TATGCAACGTTCCATGAAGCATTTCCAGAATCGAGT...GCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCGAATCGGGAGGAAACTaGGTGAAAGGCTGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGESGGN*VKGCEA
Trigger: AGCCTCGCAGCCTTTCACCCAGTTTCCTCCCGATTC...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR TCA 90 bp CCAATAATCAGACTAGCTCCAGAAGGCACAGGGAAGGTGGTGTGGACCTCTAGGTTTGGAGTGACCTTCTaGTTCAGGGTTGCCTACATT +
Preference number: 4 (lower is better)
Translates to: PIIRLAPEGTGKVVWTSRFGVTF*FRVAYI
Trigger: AATGTAGGCAACCCTGAATCAGAAGGTCACTCCAAA...CCTAGAGGTCCACACCACCTTCCCTGTGCCTTCTGGAGCTAGTCTGATTATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp GGTTACATGCCAAGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACATGTTCGTTGGCCTaGCATGGTACAGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: GYMPSQCTLATSGSQSSNTCSLA*HGTVTL
Trigger: CAAAGTTACTGTACCATGGCAGGCCAACGAACATGT...GTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCTTGGCATGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR GCA 90 bp AGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATCTCTTTGGAGGTTCTTaGATTTTCCCGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQCTLATSGSQSSNTEFNLFGGS*IFPGPA
Trigger: AGCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGAG...ATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR GCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCCTCTTTGGAGGTTCTTaGATTTTCCCGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGLFGGS*IFPGPA
Trigger: AGCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGAG...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CCA 90 bp TTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCAGAATCGGGAGGAAACTaGGTGAAAGGCTGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: FTNVAAETLEQQVTCPKSESGGN*VKGCEA
Trigger: AGCCTCGCAGCCTTTCACCCAGTTTCCTCCCGATTC...TGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp GAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACCAAGTGGCTACTTTATaGAATCAATATTACAGTGGG +
Preference number: 4 (lower is better)
Translates to: EVWGSRVTTYWSRMGRLHQVATL*NQYYSG
Trigger: CCCACTGTAATATTGATTCCATAAAGTAGCCACTTG...GTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CAA 72 bp AGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTTaGTTTGCTACCAAACCTGGAGGTGGGGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: RSDGSLAPEKQS*FATKPGGGALV
Trigger: AACCAAAGCCCCACCTCCAGGTTTGGTAGCAAACAAACTTTGCTTCTCCGGTGCTAAGCTTCCATCACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACAAGGCACAGGGAAGGTaGTGTGGACCTCTAGGGACT +
Preference number: 4 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHKAQGR*CGPLGT
Trigger: AGTCCCTAGAGGTCCACACCACCTTCCCTGTGCCTT...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp GGTTACATGCCAAGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACAAATGTCTGGGTAGCTaGGTAAGTTCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GYMPSQCTLATSGSQSSNKCLGS*VSSFAL
Trigger: CAAAGCAAATGAACTTACTCAGCTACCCAGACATTT...GTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCTTGGCATGTAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558579.5
ENST00000558594.5
CDS-3UTR TCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCACTGCAACTACGCCTTaGCAGTATGTTTCGAGAACC +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGTATTP*QYVSRT
Trigger: GGTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGT...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560246.1
CDS-3UTR TCA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACACTGCAACTACGCCTTaGCAGTATGTTTCGAGAACC +
Preference number: 4 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYTATTP*QYVSRT
Trigger: GGTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGT...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR TCA 90 bp GGTTACATGCCAAGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACAAAAGAAGCCTTTATTaGCCACTCCATTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GYMPSQCTLATSGSQSSNKRSLY*PLHSQL
Trigger: AAGCTGAGAATGGAGTGGTCAATAAAGGCTTCTTTT...GTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCTTGGCATGTAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR GCA 90 bp AGTAAGTTCATTTGCTTTGAATCCTGTGAAGCTGCAACCCTCTATATTCTTCTCTCCCGGGGCCAGCTCTaGTGCTCCTCCTTTGACATG +
Preference number: 4 (lower is better)
Translates to: SKFICFESCEAATLYILLSRGQL*CSSFDM
Trigger: CATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGA...GAGAAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561116.5
CDS-3UTR GCA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACCTCTTTGGAGGTTCTTaGATTTTCCCGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHLFGGS*IFPGPA
Trigger: AGCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGAG...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp AATTTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGCTCTTTGGAGGTTCTTaGATTTTCCCGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: NFTNVAAETLEQQVTCPKLFGGS*IFPGPA
Trigger: AGCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGAG...CTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR GCA 90 bp CACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTAGTATCAATGGTACCTaGGGACAAGCTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HKAYYQRSDGSLAPEKQSSINGT*GQAAQL
Trigger: AAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT...ACTTTGCTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACGCAGGATGGGGAGGCTaGACAGTATCAATGGTACCT +
Preference number: 4 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHAGWGG*TVSMVP
Trigger: AGGTACCATTGATACTGTGCAGCCTCCCCATCCTGC...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp CCAATAATCAGACTAGCTCCAGAAGGCACAGGGAAGGTGGTGTGGACCTCTAGGTCGAATAAGCAATCTTaGTTTTCTCTGTCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: PIIRLAPEGTGKVVWTSRSNKQS*FSLSGL
Trigger: TAGGCCTGACAGAGAAAACCAAGATTGCTTATTCGA...CCTAGAGGTCCACACCACCTTCCCTGTGCCTTCTGGAGCTAGTCTGATTATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACGCTGCACAGTATCAATaGTACCTGCGGACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHAAQYQ*YLRTSC
Trigger: GCAGCTTGTCCGCAGGTACCATTGATACTGTGCAGC...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAAGCAATGGAGGCTTCTaGGAGAAAATGAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SINGTCGQAAQLSSKCAQSNGGF*EKMSLP
Trigger: TGGAAGACTCATTTTCTCTCAGAAGCCTCCATTGCT...TTGTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACAGCAATGGAGGCTTCTaGGAGAAAATGAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYSNGGF*EKMSLP
Trigger: TGGAAGACTCATTTTCTCTCAGAAGCCTCCATTGCT...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR TCA 90 bp TACATGCCAAGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGTATTCACTGGCTATTaGTCTAATTACCTCCCAACA +
Preference number: 4 (lower is better)
Translates to: YMPSQCTLATSGSQSSNTVFTGY*SNYLPT
Trigger: TGTTGGGAGGTAATTAGATCAATAGCCAGTGAATAC...TGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCTTGGCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558579.5
CDS-3UTR GCA 90 bp AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAACATGTTCGTTGGCCTaGCATGGTACAGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: SINGTCGQAAQLSSKCAQTCSLA*HGTVTL
Trigger: CAAAGTTACTGTACCATGGCAGGCCAACGAACATGT...TTGTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCACATGTTCGTTGGCCTaGCATGGTACAGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGTCSLA*HGTVTL
Trigger: CAAAGTTACTGTACCATGGCAGGCCAACGAACATGT...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CCA 90 bp AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAATTCGTTGGCCTGCCATaGTACAGTAACTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SINGTCGQAAQLSSKCAQFVGLP*YSNFAE
Trigger: TTCTGCAAAGTTACTGTACCATGGCAGGCCAACGAA...TTGTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp AGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATTTCGTTGGCCTGCCATaGTACAGTAACTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SQCTLATSGSQSSNTEFNFVGLP*YSNFAE
Trigger: TTCTGCAAAGTTACTGTACCATGGCAGGCCAACGAA...ATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR CCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCTTCGTTGGCCTGCCATaGTACAGTAACTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGFVGLP*YSNFAE
Trigger: TTCTGCAAAGTTACTGTACCATGGCAGGCCAACGAA...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CCA 90 bp CCAATAATCAGACTAGCTCCAGAAGGCACAGGGAAGGTGGTGTGGACCTCTAGGATCTTGATTCTTCCTTaGATATGGGCAACGTATATG +
Preference number: 4 (lower is better)
Translates to: PIIRLAPEGTGKVVWTSRILILP*IWATYM
Trigger: CATATACGTTGCCCATATCCAAGGAAGAATCAAGAT...CCTAGAGGTCCACACCACCTTCCCTGTGCCTTCTGGAGCTAGTCTGATTATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATATATTCGGCTTCAATGTGAGTTaGGCGACCAAACCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: CTLATSGSQSSNTEFNIFGFNVS*ATKPSP
Trigger: CGGACTTGGTTTGGTCGCCCAACTCACATTGAAGCC...GAATATATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR TCA 90 bp AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAATCCTGTTTCACTTCATaGGGTTTCTTGGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SINGTCGQAAQLSSKCAQSCFTS*GFLVAF
Trigger: AAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGA...TTGTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp CAGAAGGGTTGTGAAGAAGGGCACTCACAACTTATTTCAGGATCAAAAATGAGCCAGGCTAAAACATCCTaGGCTGACAGAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: QKGCEEGHSQLISGSKMSQAKTS*ADRAGT
Trigger: TGTTCCTGCTCTGTCAGCTCAGGATGTTTTAGCCTG...GCTCATTTTTGATCCTGAAATAAGTTGTGAGTGCCCTTCTTCACAACCCTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558579.5
CDS-3UTR GCA 90 bp TACATGCCAAGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACACTGAGTAAGTTCATTTaGTTTGAATCCTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: YMPSQCTLATSGSQSSNTLSKFI*FESCEA
Trigger: AGCTTCACAGGATTCAAAGCAAATGAACTTACTCAG...TGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCTTGGCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558579.5
ENST00000558594.5
CDS-3UTR GCA 90 bp AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAATGCTTCATGGAACGTTaGATATATGGCTTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SINGTCGQAAQLSSKCAQCFMER*IYGLCQ
Trigger: TTGGCACAAGCCATATATGCAACGTTCCATGAAGCA...TTGTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACTGCTTCATGGAACGTTaGATATATGGCTTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYCFMER*IYGLCQ
Trigger: TTGGCACAAGCCATATATGCAACGTTCCATGAAGCA...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR GCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCTTCTTCACAACTCACTaGAACTACGCCTTGACAGTA +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGFFTTH*NYALTV
Trigger: TACTGTCAAGGCGTAGTTGCAGTGAGTTGTGAAGAA...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560246.1
CDS-3UTR GCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCTTGAGGTGGGCAAAATaGAAACTTTTCTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGLRWAK*KLFSGI
Trigger: GATCCCAGAGAAAAGTTTGCATTTTGCCCACCTCAA...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560246.1
CDS-3UTR CCA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACGGAACGTTGCATATATaGCTTGTGCCAAACAATCAG +
Preference number: 4 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYGTLHI*LVPNNQ
Trigger: CTGATTGTTTGGCACAAGCCATATATGCAACGTTCC...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACGAGGTAACTCGATTCTaGAAATGCTTCATGGAACGT +
Preference number: 4 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYEVTRF*KCFMER
Trigger: ACGTTCCATGAAGCATTTCCAGAATCGAGTTACCTC...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp ATAGGGCCTTTCACTTTGGTTGAAATCTTAGGTTTGAAACTGTGCCTGGTTTACCTTACTGGAGCAGGATaGGGAGGCTGCACAGTATCA +
Preference number: 4 (lower is better)
Translates to: IGPFTLVEILGLKLCLVYLTGAG*GGCTVS
Trigger: TGATACTGTGCAGCCTCCCCATCCTGCTCCAGTAAG...GTAAACCAGGCACAGTTTCAAACCTAAGATTTCAACCAAAGTGAAAGGCCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTACAGGGAAGGTGGTGTaGACCTCTAGGGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: TDPTWSLITRFLLISLFSTGKVV*TSRDCP
Trigger: AGGGCAGTCCCTAGAGGTCCACACCACCTTCCCTGT...ACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CAA 72 bp TGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTaGACTTACCACTTGGAGTCAAAACCAGGGACTAGA +
Preference number: 4 (lower is better)
Translates to: WVIASHEMGGVL*TYHLESKPGTR
Trigger: TCTAGTCCCTGGTTTTGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp CTTTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGACTGCTGCTCCTCCTTTaGCATGTTCGTTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLKVGALFLILVVSISHRLLLLL*HVRWPA
Trigger: GGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAG...TCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR TCA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTCTGCTGCTCCTCCTTTaGCATGTTCGTTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLILLLLL*HVRWPA
Trigger: GGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAG...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000561116.5
CDS-3UTR TCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCAAATGTCTGGGTAGCTaGGTAAGTTCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGKCLGS*VSSFAL
Trigger: CAAAGCAAATGAACTTACTCAGCTACCCAGACATTT...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR TCA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACAAATGTCTGGGTAGCTaGGTAAGTTCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYKCLGS*VSSFAL
Trigger: CAAAGCAAATGAACTTACTCAGCTACCCAGACATTT...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR GCA 90 bp AATTTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGACATGTTCGTTGGCCTaGCATGGTACAGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: NFTNVAAETLEQQVTCPKTCSLA*HGTVTL
Trigger: CAAAGTTACTGTACCATGGCAGGCCAACGAACATGT...CTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR GCA 90 bp CTTTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGACGGGGCCAGCTCTGCTaGTCCTCCTTTGACATGTTC +
Preference number: 4 (lower is better)
Translates to: LLKVGALFLILVVSISHRRGQLC*SSFDMF
Trigger: GAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCG...TCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR GCA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTCGGGGCCAGCTCTGCTaGTCCTCCTTTGACATGTTC +
Preference number: 4 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLIRGQLC*SSFDMF
Trigger: GAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCG...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000561116.5
CDS-3UTR GCA 90 bp GTAAGTTCATTTGCTTTGAATCCTGTGAAGCTGCAACCCTCTATATTCTTCTCTCTCTTTGGAGGTTCTTaGATTTTCCCGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VSSFALNPVKLQPSIFFSLFGGS*IFPGPA
Trigger: AGCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGAG...AGAGAAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561116.5
CDS-3UTR GCA 90 bp ACAGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACCTTCTGATTCAGGGTTaGCTACATTTCTTTTACCAT +
Preference number: 4 (lower is better)
Translates to: TVSMVPADKLPSFLANVHLLIQG*LHFFYH
Trigger: ATGGTAAAAGAAATGTAGGCAACCCTGAATCAGAAG...GTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCTTCTTCAATGCTCTTTaGAGGTTCTTGCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGFFNAL*RFLHFP
Trigger: GGGAAAATGCAAGAACCTCCAAAGAGCATTGAAGAA...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CCA 90 bp TTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCACATGAATGGTGGTTGTaGAGAGTTCTTTCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: FTNVAAETLEQQVTCPKSHEWWL*RVLSVS
Trigger: GGAAACTGAAAGAACTCTCCACAACCACCATTCATG...TGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCGGCTTCAATGTGAGTTaGGCGACCAAAAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGGFNVS*ATKNQN
Trigger: ATTTTGATTTTTGGTCGCCCAACTCACATTGAAGCC...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560246.1
CDS-3UTR TCA 90 bp AAGTCTGAGAGAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCAAATGTCTGGGTAGCTaGGTAAGTTCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KSERNYLGHLGIGRTFCAKCLGS*VSSFAL
Trigger: CAAAGCAAATGAACTTACTCAGCTACCCAGACATTT...GGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCTCAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp ATAGGGCCTTTCACTTTGGTTGAAATCTTAGGTTTGAAACTGTGCCTGGTTTACTGTCCTCATTTGGAGTaGCCTTCTGATTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: IGPFTLVEILGLKLCLVYCPHLE*PSDSGL
Trigger: CAACCCTGAATCAGAAGGTCACTCCAAATGAGGACA...GTAAACCAGGCACAGTTTCAAACCTAAGATTTCAACCAAAGTGAAAGGCCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAGCCTTTCACTTTGGTTaGAATCTTAGGTTTGAAACT +
Preference number: 4 (lower is better)
Translates to: SINGTCGQAAQLSSKCAQAFHFG*NLRFET
Trigger: AGTTTCAAACCTAAGATTTCAACCAAAGTGAAAGGC...TTGTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp TTTGGTTACCCTACAGGGATACTACCCCAAAATTCCCACAGACACTTGAAGACTATTCCCACAGACACTTaGAGACTCAAAAGAAACACC +
Preference number: 4 (lower is better)
Translates to: FGYPTGILPQNSHRHLKTIPTDT*RLKRNT
Trigger: GGTGTTTCTTTTGAGTCTTCAAGTGTCTGTGGGAAT...AGTCTTCAAGTGTCTGTGGGAATTTTGGGGTAGTATCCCTGTAGGGTAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558579.5
CDS-3UTR GCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCCTGAGTAAGTTCATTTaGTTTGAATCCTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGLSKFI*FESCEA
Trigger: AGCTTCACAGGATTCAAAGCAAATGAACTTACTCAG...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR GCA 90 bp AATTTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTTCTTCACAACTCACTaGAACTACGCCTTGACAGTA +
Preference number: 4 (lower is better)
Translates to: NFTNVAAETLEQQVTCPKFFTTH*NYALTV
Trigger: TACTGTCAAGGCGTAGTTGCAGTGAGTTGTGAAGAA...CTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR GCA 90 bp TCTAATTACCTCCCAACACCTGCAGTTTTTCACTGTTTGGTTACCCTACAGGGATTACCTCCCAACACCTaGAGTTTTTCACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SNYLPTPAVFHCLVTLQGLPPNT*SFSLFG
Trigger: ACCAAACAGTGAAAAACTGCAGGTGTTGGGAGGTAA...TCCCTGTAGGGTAACCAAACAGTGAAAAACTGCAGGTGTTGGGAGGTAATTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558579.5
CDS-3UTR CCA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTGAATCGGGAGGAAACTaGGTGAAAGGCTGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLIESGGN*VKGCEA
Trigger: AGCCTCGCAGCCTTTCACCCAGTTTCCTCCCGATTC...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR CCA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACGAGGTAACTCGATTCTaGAAATGCTTCATGGAACGT +
Preference number: 4 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHEVTRF*KCFMER
Trigger: ACGTTCCATGAAGCATTTCCAGAATCGAGTTACCTC...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACCATGAATGGTGGTTGTaGAGAGTTCTTTCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHHEWWL*RVLSVS
Trigger: GGAAACTGAAAGAACTCTCCACAACCACCATTCATG...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACTGCTACCATGAATGGTaGTTGTGGAGAGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHCYHEW*LWRVLS
Trigger: TGAAAGAACTCTCCACAACCACCATTCATGGTAGCA...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCTTAAGAATTCTTCAATaGTCTTTGGAGGTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGLRILQ*SLEVLA
Trigger: TGCAAGAACCTCCAAAGAGCATTGAAGAATTCTTAA...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR GCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCTTCCATGATCAAAAGTaGTTCAAATATTCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGFHDQK*FKYSRN
Trigger: GTTCCTCGAATATTTGAAGCACTTTTGATCATGGAA...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CCA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACTTCTTCAATGCTCTTTaGAGGTTCTTGCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHFFNAL*RFLHFP
Trigger: GGGAAAATGCAAGAACCTCCAAAGAGCATTGAAGAA...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp AATTTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTTCTTCAATGCTCTTTaGAGGTTCTTGCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: NFTNVAAETLEQQVTCPKFFNAL*RFLHFP
Trigger: GGGAAAATGCAAGAACCTCCAAAGAGCATTGAAGAA...CTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCAAAATGGATTTCCCTTaGCCAATAATCCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGKMDFP*PIIPIL
Trigger: CAAAATTGGGATTATTGGCCAAGGGAAATCCATTTT...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CCA 90 bp CACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTAACACGATTAAACTCTaGACCAGTACTACTATAGTG +
Preference number: 4 (lower is better)
Translates to: HKAYYQRSDGSLAPEKQSNTIKL*TSTTIV
Trigger: CACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTT...ACTTTGCTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCATGCAAACTTTTCTCTaGGATCAACATTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGMQTFL*DQHFFT
Trigger: TGTGAAGAAATGTTGATCCCAGAGAAAAGTTTGCAT...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560246.1
CDS-3UTR CCA 90 bp AATTTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGGGCTTCAATGTGAGTTaGGCGACCAAAAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: NFTNVAAETLEQQVTCPKGFNVS*ATKNQN
Trigger: ATTTTGATTTTTGGTCGCCCAACTCACATTGAAGCC...CTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR TCA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACGTTGATATATGTTCTTaGCTGTCTGCAATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHVDICS*LSAILS
Trigger: GGAAAGAATTGCAGACAGTCAAGAACATATATCAAC...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp AATTTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGGTTGATATATGTTCTTaGCTGTCTGCAATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: NFTNVAAETLEQQVTCPKVDICS*LSAILS
Trigger: GGAAAGAATTGCAGACAGTCAAGAACATATATCAAC...CTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR TCA 90 bp GATTTACGTGTAAGCTTGCTATACAACTCTTCAAGTGGCTACTTTATGGAATCATTATTACCAGAGGAGTaGTGGAAGCTTAGCACCGGA +
Preference number: 4 (lower is better)
Translates to: DLRVSLLYNSSSGYFMESLLPEE*WKLSTG
Trigger: TCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAA...TGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp GTTAATTTTCCATTAGAGATTCAACCAACCACCGACCCAACCTGGAGTTTAATATCTGTTCTAGGGGACTaGTTCTTCTTTGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: VNFPLEIQPTTDPTWSLISVLGD*FFFETA
Trigger: GGCTGTTTCAAAGAAGAATCAGTCCCCTAGAACAGA...TATTAAACTCCAGGTTGGGTCGGTGGTTGGTTGAATCTCTAATGGAAAATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp AGTAAGTTCATTTGCTTTGAATCCTGTGAAGCTGCAACCCTCTATATTCTTCTCACATGTTCGTTGGCCTaGCATGGTACAGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: SKFICFESCEAATLYILLTCSLA*HGTVTL
Trigger: CAAAGTTACTGTACCATGGCAGGCCAACGAACATGT...GAGAAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561116.5
CDS-3UTR GCA 90 bp TTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATTCCATGATCAAAAGTaGTTCAAATATTCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: FTNVAAETLEQQVTCPKSFHDQK*FKYSRN
Trigger: GTTCCTCGAATATTTGAAGCACTTTTGATCATGGAA...TGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCGGCTTCAATGTGAGTTaGGCGACCAAATGCAACTAC +
Preference number: 4 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVGFNVS*ATKCNY
Trigger: GTAGTTGCATTTGGTCGCCCAACTCACATTGAAGCC...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp GTAAGTTCATTTGCTTTGAATCCTGTGAAGCTGCAACCCTCTATATTCTTCTCTTTCGTTGGCCTGCCATaGTACAGTAACTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VSSFALNPVKLQPSIFFSFVGLP*YSNFAE
Trigger: TTCTGCAAAGTTACTGTACCATGGCAGGCCAACGAA...AGAGAAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561116.5
CDS-3UTR CCA 90 bp TGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATATATTCTTCTTCAATGCTCTTTaGAGGTTCTTGCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: CTLATSGSQSSNTEFNIFFFNAL*RFLHFP
Trigger: GGGAAAATGCAAGAACCTCCAAAGAGCATTGAAGAA...GAATATATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR CCA 90 bp TTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCAGGAACGTTGCATATATaGCTTGTGCCAAACAATCAG +
Preference number: 4 (lower is better)
Translates to: FLANVHKAYYQRSDGSLAGTLHI*LVPNNQ
Trigger: CTGATTGTTTGGCACAAGCCATATATGCAACGTTCC...TGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp AAGTCTGAGAGAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCGAATCAATATTACAGTaGGTTATTGCCAGTCATGAA +
Preference number: 4 (lower is better)
Translates to: KSERNYLGHLGIGRTFCAESILQ*VIASHE
Trigger: TTCATGACTGGCAATAACCCACTGTAATATTGATTC...GGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCTCAGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp AAGGGTTGTGAAGAAGGGCACTCACAACTTATTTCAGGATCAAAAATGAGCAGGCAGTTTTTCACTGTTTaGTTACCCTACAGGGATACT +
Preference number: 4 (lower is better)
Translates to: KGCEEGHSQLISGSKMSRQFFTV*LPYRDT
Trigger: AGTATCCCTGTAGGGTAACCAAACAGTGAAAAACTG...CCTGCTCATTTTTGATCCTGAAATAAGTTGTGAGTGCCCTTCTTCACAACCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558579.5
CDS-3UTR TCA 90 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTAATGCAACTACGCCTTaGCAGTATGTTTCGAGAACC +
Preference number: 4 (lower is better)
Translates to: TDPTWSLITRFLLISLFSNATTP*QYVSRT
Trigger: GGTTCTCGAAACATACTGTCAAGGCGTAGTTGCATT...ACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCTTAACGCCTCCTTCCTaGTTTACGTGTAAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVLTPPS*FTCKLA
Trigger: AGCAAGCTTACACGTAAATCAGGAAGGAGGCGTTAA...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTTCTGCAACTACGCCTTaGCAGTATGTTTCGAGAACC +
Preference number: 4 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLISATTP*QYVSRT
Trigger: GGTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGA...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR GCA 90 bp GTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACTTGGAGTCATTAAGAATTCTTCAATaGTCTTTGGAGGTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VIASHEMGGVLLTYHLESLRILQ*SLEVLA
Trigger: TGCAAGAACCTCCAAAGAGCATTGAAGAATTCTTAA...TGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp GTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACTTGGAGTCATGCATATATGGCTTGTaGCAAACAATCAGGATATAT +
Preference number: 4 (lower is better)
Translates to: VIASHEMGGVLLTYHLESCIYGL*QTIRIY
Trigger: ATATATCCTGATTGTTTGGCACAAGCCATATATGCA...TGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp TTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCATATGGGCAACGTATATaGTCTTGGGTTGTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: FLANVHKAYYQRSDGSLAYGQRI*SWVVQN
Trigger: ATTCTGAACAACCCAAGAGCATATACGTTGCCCATA...TGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp GATTTACGTGTAAGCTTGCTATACAACTCTTCAAGTGGCTACTTTATGGAATCAGAAGCAAAGTTTGTTTaGTACCAAACCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: DLRVSLLYNSSSGYFMESEAKFV*YQTWRW
Trigger: CCACCTCCAGGTTTGGTAGCAAACAAACTTTGCTTC...TGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp GATTTACGTGTAAGCTTGCTATACAACTCTTCAAGTGGCTACTTTATGGAATCAACCACCGACCCAACCTaGAGTTTAATAACACGCTTT +
Preference number: 4 (lower is better)
Translates to: DLRVSLLYNSSSGYFMESTTDPT*SLITRF
Trigger: AAAGCGTGTTATTAAACTCCAGGTTGGGTCGGTGGT...TGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp AATTTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGATGCAAACTTTTCTCTaGGATCAACATTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: NFTNVAAETLEQQVTCPKMQTFL*DQHFFT
Trigger: TGTGAAGAAATGTTGATCCCAGAGAAAAGTTTGCAT...CTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561064.5
3UTR CAA 72 bp AGTCATGAAATGGGAGGAGTACTGTTGACTTACCACTaGGAGTCAAAACCAGGGACTAGATTTAGATACAAT +
Preference number: 4 (lower is better)
Translates to: SHEMGGVLLTYH*ESKPGTRFRYN
Trigger: ATTGTATCTAAATCTAGTCCCTGGTTTTGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CAA 72 bp ACCACCGACCCAACCTGGAGTTTAATAACACGCTTTTaGTTGATAAGTTTATTCAGTGAACTAGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: TTDPTWSLITRF*LISLFSELGYL
Trigger: CAGATAGCCTAGTTCACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp AGTAAGTTCATTTGCTTTGAATCCTGTGAAGCTGCAACCCTCTATATTCTTCTCAAATGTCTGGGTAGCTaGGTAAGTTCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SKFICFESCEAATLYILLKCLGS*VSSFAL
Trigger: CAAAGCAAATGAACTTACTCAGCTACCCAGACATTT...GAGAAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561116.5
CDS-3UTR TCA 90 bp TTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCAGAAGTCGATACTAGTTaGTATATGTTCTTGACTGTC +
Preference number: 4 (lower is better)
Translates to: FLANVHKAYYQRSDGSLAEVDTS*YMFLTV
Trigger: GACAGTCAAGAACATATATCAACTAGTATCGACTTC...TGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp GGTTGTGAAGAAGGGCACTCACAACTTATTTCAGGATCAAAAATGAGCAGGCTATTCCATGATCAAAAGTaGTTCAAATATTCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GCEEGHSQLISGSKMSRLFHDQK*FKYSRN
Trigger: GTTCCTCGAATATTTGAAGCACTTTTGATCATGGAA...TAGCCTGCTCATTTTTGATCCTGAAATAAGTTGTGAGTGCCCTTCTTCACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558579.5
CDS-3UTR CCA 90 bp TTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATCTTCGTTGGCCTGCCATaGTACAGTAACTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FKSRCPVPYISSEYKSQIFVGLP*YSNFAE
Trigger: TTCTGCAAAGTTACTGTACCATGGCAGGCCAACGAA...GATCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp CTGAGTAAGTTCATTTGCTTTGAATCCTGTGAAGCTGCAACCCTCTATATTCTTTTCTTCAATGCTCTTTaGAGGTTCTTGCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: LSKFICFESCEAATLYILFFNAL*RFLHFP
Trigger: GGGAAAATGCAAGAACCTCCAAAGAGCATTGAAGAA...AAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561116.5
CDS-3UTR CCA 90 bp GTTAATTTTCCATTAGAGATTCAACCAACCACCGACCCAACCTGGAGTTTAATATCTGGAAATGCTTCATaGAACGTTGCATATATGGCT +
Preference number: 4 (lower is better)
Translates to: VNFPLEIQPTTDPTWSLISGNAS*NVAYMA
Trigger: AGCCATATATGCAACGTTCCATGAAGCATTTCCAGA...TATTAAACTCCAGGTTGGGTCGGTGGTTGGTTGAATCTCTAATGGAAAATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCATTGGTAGCCTTTGCTTaGAGTATCCTAAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: FLANVHKAYYQRSDGSLALVAFA*SILKSF
Trigger: AAAGGATTTTAGGATACTCCAAGCAAAGGCTACCAA...TGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
3UTR CAA 72 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTaGATAAGTTTATTCAGTGAACTAGGCTATCTGTTC +
Preference number: 4 (lower is better)
Translates to: TDPTWSLITRFL*ISLFSELGYLF
Trigger: GAACAGATAGCCTAGTTCACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTCATTCTCAGCTTTCTTaGAATTCTGCAACTACGCCT +
Preference number: 4 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLIHSQLS*NSATTP
Trigger: AGGCGTAGTTGCAGAATTTCAAGAAAGCTGAGAATG...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR GCA 90 bp GTTAATTTTCCATTAGAGATTCAACCAACCACCGACCCAACCTGGAGTTTAATACTGAGTAAGTTCATTTaGTTTGAATCCTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VNFPLEIQPTTDPTWSLILSKFI*FESCEA
Trigger: AGCTTCACAGGATTCAAAGCAAATGAACTTACTCAG...TATTAAACTCCAGGTTGGGTCGGTGGTTGGTTGAATCTCTAATGGAAAATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp GTAAGTTCATTTGCTTTGAATCCTGTGAAGCTGCAACCCTCTATATTCTTCTCTCTGAGTAAGTTCATTTaGTTTGAATCCTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VSSFALNPVKLQPSIFFSLSKFI*FESCEA
Trigger: AGCTTCACAGGATTCAAAGCAAATGAACTTACTCAG...AGAGAAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561116.5
CDS-3UTR GCA 90 bp CTTTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATTGAGGTGGGCAAAATaGAAACTTTTCTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: LLKVGALFLILVVSISHRLRWAK*KLFSGI
Trigger: GATCCCAGAGAAAAGTTTGCATTTTGCCCACCTCAA...TCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp CTTTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATGCTACCATGAATGGTaGTTGTGGAGAGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LLKVGALFLILVVSISHRCYHEW*LWRVLS
Trigger: TGAAAGAACTCTCCACAACCACCATTCATGGTAGCA...TCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTTTTTGCTACCATGAATaGTGGTTGTGGAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TDPTWSLITRFLLISLFSFCYHE*WLWRVL
Trigger: AAGAACTCTCCACAACCACCATTCATGGTAGCAAAA...ACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp GATTTACGTGTAAGCTTGCTATACAACTCTTCAAGTGGCTACTTTATGGAATCAATTCTTCCTTGGATATaGGCAACGTATATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: DLRVSLLYNSSSGYFMESILPWI*ATYMLL
Trigger: CAAGAGCATATACGTTGCCCATATCCAAGGAAGAAT...TGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCAAGCCAAGATCATGCTTaGACAGATCTTTTAAGAATA +
Preference number: 4 (lower is better)
Translates to: FLANVHKAYYQRSDGSLASQDHA*TDLLRI
Trigger: TATTCTTAAAAGATCTGTCCAAGCATGATCTTGGCT...TGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR TCA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCAAAATCAATGGACTCTaGCCTCCAAAATTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVKINGL*PPKLKR
Trigger: TCTCTTCAATTTTGGAGGTCAGAGTCCATTGATTTT...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp CTGAGTAAGTTCATTTGCTTTGAATCCTGTGAAGCTGCAACCCTCTATATTCTTTTAAGAATTCTTCAATaGTCTTTGGAGGTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LSKFICFESCEAATLYILLRILQ*SLEVLA
Trigger: TGCAAGAACCTCCAAAGAGCATTGAAGAATTCTTAA...AAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTACTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561116.5
CDS-3UTR GCA 90 bp TTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATCACTCGATTCTGGAAATaGTTCATGGAACGTTGCATA +
Preference number: 4 (lower is better)
Translates to: FKSRCPVPYISSEYKSQITRFWK*FMERCI
Trigger: TATGCAACGTTCCATGAAGCATTTCCAGAATCGAGT...GATCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR GCA 90 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTTTTCTTGGTAGCCTTTaGTTGGAGTATCCTAAAATC +
Preference number: 4 (lower is better)
Translates to: TDPTWSLITRFLLISLFSFLGSL*LEYPKI
Trigger: GATTTTAGGATACTCCAAGCAAAGGCTACCAAGAAA...ACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CCA 90 bp TTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATCTCTGGAAATGCTTCATaGAACGTTGCATATATGGCT +
Preference number: 4 (lower is better)
Translates to: FKSRCPVPYISSEYKSQISGNAS*NVAYMA
Trigger: AGCCATATATGCAACGTTCCATGAAGCATTTCCAGA...GATCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp TTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATCTTTTGCTACCATGAATaGTGGTTGTGGAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: FKSRCPVPYISSEYKSQIFCYHE*WLWRVL
Trigger: AAGAACTCTCCACAACCACCATTCATGGTAGCAAAA...GATCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR TCA 90 bp CTTTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATCACTTTCAGCTAGTTaGTATATGTTCTTGACTGTC +
Preference number: 4 (lower is better)
Translates to: LLKVGALFLILVVSISHRSLSAS*YMFLTV
Trigger: GACAGTCAAGAACATATATCAACTAGCTGAAAGTGA...TCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR GCA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCTTCCATGATCAAAAGTaGTTCAAATATTCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVFHDQK*FKYSRN
Trigger: GTTCCTCGAATATTTGAAGCACTTTTGATCATGGAA...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp CTTTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGACTGAGTAAGTTCATTTaGTTTGAATCCTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLKVGALFLILVVSISHRLSKFI*FESCEA
Trigger: AGCTTCACAGGATTCAAAGCAAATGAACTTACTCAG...TCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCAAAATGGATTTCCCTTaGCCAATAATCCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVKMDFP*PIIPIL
Trigger: CAAAATTGGGATTATTGGCCAAGGGAAATCCATTTT...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR GCA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTTTAAGAATTCTTCAATaGTCTTTGGAGGTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLILRILQ*SLEVLA
Trigger: TGCAAGAACCTCCAAAGAGCATTGAAGAATTCTTAA...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000561116.5
CDS-3UTR GCA 90 bp TTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATCTTAAGAATTCTTCAATaGTCTTTGGAGGTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: FKSRCPVPYISSEYKSQILRILQ*SLEVLA
Trigger: TGCAAGAACCTCCAAAGAGCATTGAAGAATTCTTAA...GATCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR GCA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTTTCCATGATCAAAAGTaGTTCAAATATTCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLIFHDQK*FKYSRN
Trigger: GTTCCTCGAATATTTGAAGCACTTTTGATCATGGAA...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558579.5
ENST00000558594.5
CDS-3UTR GCA 90 bp TTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATCTGCATATATGGCTTGTaGCAAACAATCAGGATATAT +
Preference number: 4 (lower is better)
Translates to: FKSRCPVPYISSEYKSQICIYGL*QTIRIY
Trigger: ATATATCCTGATTGTTTGGCACAAGCCATATATGCA...GATCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR GCA 90 bp TTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATCGCTTTTAAAAGTAGGTaGCCTGTTCCTTATATTAGT +
Preference number: 4 (lower is better)
Translates to: FKSRCPVPYISSEYKSQIAFKSR*PVPYIS
Trigger: ACTAATATAAGGAACAGGGCACCTACTTTTAAAAGC...GATCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CCA 90 bp CTTTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGAAAAATGGATTTCCCTTaGCCAATAATCCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: LLKVGALFLILVVSISHRKMDFP*PIIPIL
Trigger: CAAAATTGGGATTATTGGCCAAGGGAAATCCATTTT...TCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS TCA 90 bp TCCCAGCAAGAATCGGGAGGAAACTGGGTGAAAGGCTGCGAGGCTTaGGGCGGGTCCCGGACGAACGCGGCCCTGCCCCTCGCCGGAGCC +
Preference number: 5 (lower is better)
Translates to: SQQESGGNWVKGCEA*GGSRTNAALPLAGA
Trigger: GGCTCCGGCGAGGGGCAGGGCCGCGTTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTTCACCCAGTTTCCTCCCGATTCTTGCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558862.2
ENST00000561064.5
CDS TCA 90 bp GCTTCCCAATTTTGTTGTCCCAGCAAGAATCGGGAGGAAACTGGGTaGAAGGCTGCGAGGCTTGAGGCGGGTCCCGGACGAACGCGGCCC +
Preference number: 5 (lower is better)
Translates to: ASQFCCPSKNREETG*KAARLEAGPGRTRP
Trigger: GGGCCGCGTTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTTCACCCAGTTTCCTCCCGATTCTTGCTGGGACAACAAAATTGGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558862.2
ENST00000561064.5
CDS-3UTR CAA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCGAAAGGCTGCGAGGCTaGAGGCGGGTCCCGGACGAA +
Preference number: 5 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGERLRG*RRVPDE
Trigger: TTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTTC...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR CAA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACGAAAGGCTGCGAGGCTaGAGGCGGGTCCCGGACGAA +
Preference number: 5 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYERLRG*RRVPDE
Trigger: TTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTTC...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS GCA 90 bp GAACATAAAGCTGTGGAAGCTTCCTTACCCCGGGGCCAGCTCTGCTaGTCCTCCTTTGACATGTTCGTTGGCCTGCCATGGTACAGTAAC +
Preference number: 5 (lower is better)
Translates to: EHKAVEASLPRGQLC*SSFDMFVGLPWYSN
Trigger: GTTACTGTACCATGGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGGTAAGGAAGCTTCCACAGCTTTATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557892.1
CDS GCA 90 bp AGTGAACATAAAGCTGTGGAAGCTTCCTTACCCCGGGGCCAGCTCTaGTGCTCCTCCTTTGACATGTTCGTTGGCCTGCCATGGTACAGT +
Preference number: 5 (lower is better)
Translates to: SEHKAVEASLPRGQL*CSSFDMFVGLPWYS
Trigger: ACTGTACCATGGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGGTAAGGAAGCTTCCACAGCTTTATGTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557892.1
CDS TCA 90 bp ACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGATGGTaGTTTCTGCATTTCCATCTGAGGTACCAGGTTCATCTCACTGGA +
Preference number: 5 (lower is better)
Translates to: TAPVYSSQRERRRRW*FLHFHLRYQVHLTG
Trigger: TCCAGTGAGATGAACCTGGTACCTCAGATGGAAATGCAGAAATCACCATCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS-3UTR CAA 90 bp GAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACGTTTTCTTAGGTGCTTaGGAAATACCAGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: EVWGSRVTTYWSRMGRLHVFLGA*EIPASS
Trigger: TGAGCTGGCTGGTATTTCCAAAGCACCTAAGAAAAC...GTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS TCA 90 bp CCCAGCGTGAGCGACGCAGAAGATGGTGATTTCTGCATTTCCATCTaGGGTACCAGGTTCATCTCACTGGAAAATCGTGTCACTCCCACC +
Preference number: 5 (lower is better)
Translates to: PSVSDAEDGDFCISI*GTRFISLENRVTPT
Trigger: GGTGGGAGTGACACGATTTTCCAGTGAGATGAACCTGGTACCTCAGATGGAAATGCAGAAATCACCATCTTCTGCGTCGCTCACGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS TCA 90 bp CCAAGATGGCCAAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGATGGTGATTTCTGCATTTCCATCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: PRWPNRNSSGLQLPA*ATQKMVISAFPSEV
Trigger: TACCTCAGATGGAAATGCAGAAATCACCATCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTTGGCCATCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS-3UTR CAA 90 bp GGTTACATGCCAAGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACCGCTTCCCAATTTTGTaGTCCCAGCAAGAATCGGGA +
Preference number: 5 (lower is better)
Translates to: GYMPSQCTLATSGSQSSNRFPIL*SQQESG
Trigger: TCCCGATTCTTGCTGGGACAACAAAATTGGGAAGCG...GTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCTTGGCATGTAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR CAA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCGCTCTTTGGAGGTTCTaGCATTTTCCCGGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGALWRF*HFPGAS
Trigger: GCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGAGC...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CAA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACGCTCTTTGGAGGTTCTaGCATTTTCCCGGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYALWRF*HFPGAS
Trigger: GCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGAGC...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CAA 90 bp GAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACTACCATGAATGGTGGTaGTGGAGAGTTCTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: EVWGSRVTTYWSRMGRLHYHEWW*WRVLSV
Trigger: AACTGAAAGAACTCTCCACAACCACCATTCATGGTA...GTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTGACCCTTGAGCCCCAAACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAATCTGCTGCTCCTCCTTaGACATGTTCGTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SINGTCGQAAQLSSKCAQSAAPP*TCSLAC
Trigger: GCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGA...TTGTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp AGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATTCTGCTGCTCCTCCTTaGACATGTTCGTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SQCTLATSGSQSSNTEFNSAAPP*TCSLAC
Trigger: GCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGA...ATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR CAA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCTCTGCTGCTCCTCCTTaGACATGTTCGTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGSAAPP*TCSLAC
Trigger: GCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGA...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS CCA 90 bp GGCCAGCTCTGCTGCTCCTCCTTTGACATGTTCGTTGGCCTGCCATaGTACAGTAACTTTGCAGAAATGAAGAGAAATCAGCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: GQLCCSSFDMFVGLP*YSNFAEMKRNQLGL
Trigger: AAGACCCAGCTGATTTCTCTTCATTTCTGCAAAGTTACTGTACCATGGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGAGCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000559905.5
ENST00000560246.1
ENST00000561064.5
ENST00000561116.5
CDS-3UTR CAA 90 bp TTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATCTGCTGCTCCTCCTTaGACATGTTCGTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: FTNVAAETLEQQVTCPKSSAAPP*TCSLAC
Trigger: GCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGA...TGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CAA 90 bp GATTTACGTGTAAGCTTGCTATACAACTCTTCAAGTGGCTACTTTATGGAATCAGAAAGGCTGCGAGGCTaGAGGCGGGTCCCGGACGAA +
Preference number: 5 (lower is better)
Translates to: DLRVSLLYNSSSGYFMESERLRG*RRVPDE
Trigger: TTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTTC...TGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp AGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATCCTTTGACATGTTCGTaGGCCTGCCATGGTACAGTA +
Preference number: 5 (lower is better)
Translates to: SQCTLATSGSQSSNTEFNPLTCS*ACHGTV
Trigger: TACTGTACCATGGCAGGCCAACGAACATGTCAAAGG...ATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR CAA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCCCTTTGACATGTTCGTaGGCCTGCCATGGTACAGTA +
Preference number: 5 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGPLTCS*ACHGTV
Trigger: TACTGTACCATGGCAGGCCAACGAACATGTCAAAGG...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CAA 90 bp TGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATATATTCGCTCTTTGGAGGTTCTaGCATTTTCCCGGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CTLATSGSQSSNTEFNIFALWRF*HFPGAS
Trigger: GCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGAGC...GAATATATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR CAA 90 bp AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAGGGACTGATTCTTCTTaGAAACAGCCCGGCCTTAAG +
Preference number: 5 (lower is better)
Translates to: SINGTCGQAAQLSSKCAQGTDSS*KQPGLK
Trigger: CTTAAGGCCGGGCTGTTTCAAAGAAGAATCAGTCCC...TTGTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCAACCGCTTCCCAATTTaGTTGTCCCAGCAAGAATCG +
Preference number: 5 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGNRFPI*LSQQES
Trigger: CGATTCTTGCTGGGACAACAAAATTGGGAAGCGGTT...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CAA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACAACCGCTTCCCAATTTaGTTGTCCCAGCAAGAATCG +
Preference number: 5 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYNRFPI*LSQQES
Trigger: CGATTCTTGCTGGGACAACAAAATTGGGAAGCGGTT...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CAA 90 bp TTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCAGCTCTTTGGAGGTTCTaGCATTTTCCCGGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: FLANVHKAYYQRSDGSLAALWRF*HFPGAS
Trigger: GCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGAGC...TGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp ACAGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAGAAGCAAAGTTTGTTaGCTACCAAACCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: TVSMVPADKLPSFLANVHRSKVC*LPNLEV
Trigger: CACCTCCAGGTTTGGTAGCAAACAAACTTTGCTTCT...GTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCCACTGCAACTACGCCTaGACAGTATGTTTCGAGAAC +
Preference number: 5 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGHCNYA*TVCFEN
Trigger: GTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGTG...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560246.1
CDS-3UTR CAA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACCACTGCAACTACGCCTaGACAGTATGTTTCGAGAAC +
Preference number: 5 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYHCNYA*TVCFEN
Trigger: GTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGTG...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS TCA 90 bp TTGACATGTTCGTTGGCCTGCCATGGTACAGTAACTTTGCAGAAATaGAGAGAAATCAGCTGGGTCTTAGGCTTCAATGTGAGTTGGGCG +
Preference number: 5 (lower is better)
Translates to: LTCSLACHGTVTLQK*REISWVLGFNVSWA
Trigger: CGCCCAACTCACATTGAAGCCTAAGACCCAGCTGATTTCTCTTCATTTCTGCAAAGTTACTGTACCATGGCAGGCCAACGAACATGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000559905.5
ENST00000560246.1
ENST00000561064.5
ENST00000561116.5
CDS CCA 90 bp CACCCTATTAAAGCTTTCTTCCTTGGCAATACTCATCTCAGTGATTaGCCATCTGTGCAGCGAGCATTAAGACCTAGACCAAACCCTTGG +
Preference number: 5 (lower is better)
Translates to: HPIKAFFLGNTHLSD*PSVQRALRPRPNPW
Trigger: CCAAGGGTTTGGTCTAGGTCTTAATGCTCGCTGCACAGATGGCCAATCACTGAGATGAGTATTGCCAAGGAAGAAAGCTTTAATAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557892.1
CDS-3UTR CAA 90 bp GTAAGTTCATTTGCTTTGAATCCTGTGAAGCTGCAACCCTCTATATTCTTCTCTGCTCTTTGGAGGTTCTaGCATTTTCCCGGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VSSFALNPVKLQPSIFFSALWRF*HFPGAS
Trigger: GCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGAGC...AGAGAAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561116.5
CDS-3UTR CAA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACACTGTTTTAGGAAGTTaGGGGCTCAAGGGTCACGAC +
Preference number: 5 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHTVLGS*GLKGHD
Trigger: GTCGTGACCCTTGAGCCCCAAACTTCCTAAAACAGT...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCTTCTGCAACTACGCCTaGACAGTATGTTTCGAGAAC +
Preference number: 5 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGFCNYA*TVCFEN
Trigger: GTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGAA...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS TCA 90 bp TTCTCTGGGATCAACATTTCTTCACAACTCACTGCAACTACGCCTTaGCAGTATGTTTCGAGAACCGCTTCCCAATTTTGTTGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: FSGINISSQLTATTP*QYVSRTASQFCCPS
Trigger: GCTGGGACAACAAAATTGGGAAGCGGTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGTGAGTTGTGAAGAAATGTTGATCCCAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558615.5
ENST00000560246.1
ENST00000561064.5
CDS CCA 90 bp GGAGGGTATTATACAAGGGCATACATACCAGAAAGCAGGGATCACTaGAAGCCATTTTACAGGCTGCCTGATCCAAGTCATAAACTAGGT +
Preference number: 5 (lower is better)
Translates to: GGYYTRAYIPESRDH*KPFYRLPDPSHKLG
Trigger: ACCTAGTTTATGACTTGGATCAGGCAGCCTGTAAAATGGCTTCCAGTGATCCCTGCTTTCTGGTATGTATGCCCTTGTATAATACCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559351.1
CDS-3UTR CAA 90 bp GTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACTTGGAGTCAAACCGCTTCCCAATTTaGTTGTCCCAGCAAGAATCG +
Preference number: 5 (lower is better)
Translates to: VIASHEMGGVLLTYHLESNRFPI*LSQQES
Trigger: CGATTCTTGCTGGGACAACAAAATTGGGAAGCGGTT...TGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp TTACAGTGGGTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACAGGCTTCAATGTGAGTaGGGCGACCAAATGCAACTA +
Preference number: 5 (lower is better)
Translates to: LQWVIASHEMGGVLLTYHRLQCE*GDQMQL
Trigger: TAGTTGCATTTGGTCGCCCAACTCACATTGAAGCCT...GTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAACCCACTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp GTAAGTTCATTTGCTTTGAATCCTGTGAAGCTGCAACCCTCTATATTCTTCTCTTCTGCTGCTCCTCCTTaGACATGTTCGTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VSSFALNPVKLQPSIFFSSAAPP*TCSLAC
Trigger: GCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGA...AGAGAAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561116.5
CDS-3UTR CAA 90 bp TTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCAATGCTTCATGGAACGTaGCATATATGGCTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: FTNVAAETLEQQVTCPKSMLHGT*HIWLVP
Trigger: TGGCACAAGCCATATATGCAACGTTCCATGAAGCAT...TGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CAA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACTACCATGAATGGTGGTaGTGGAGAGTTCTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYYHEWW*WRVLSV
Trigger: AACTGAAAGAACTCTCCACAACCACCATTCATGGTA...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CAA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCAGGCTTCAATGTGAGTaGGGCGACCAAAAATCAAAA +
Preference number: 5 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGRLQCE*GDQKSK
Trigger: TTTTGATTTTTGGTCGCCCAACTCACATTGAAGCCT...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560246.1
CDS-3UTR CAA 90 bp GTTTTACCAGGTAACCATCCCACCCTCATTTTAGCCCTCGTATTCACTGGCTATGCAGTTTTTCACTGTTaGGTTACCCTACAGGGATAC +
Preference number: 5 (lower is better)
Translates to: VLPGNHPTLILALVFTGYAVFHC*VTLQGY
Trigger: GTATCCCTGTAGGGTAACCAAACAGTGAAAAACTGC...ATAGCCAGTGAATACGAGGGCTAAAATGAGGGTGGGATGGTTACCTGGTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558579.5
CDS-3UTR CAA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCATTCTTCAATGCTCTTaGGAGGTTCTTGCATTTTCC +
Preference number: 5 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGILQCS*EVLAFS
Trigger: GGAAAATGCAAGAACCTCCAAAGAGCATTGAAGAAT...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CAA 90 bp AGCCAGTGTACGCTAGCAACCTCAGGGTCCCAAAGCAGTAACACAGAGTTTAATGTAAGTTCATTTGCTTaGAATCCTGTGAAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: SQCTLATSGSQSSNTEFNVSSFA*NPVKLQ
Trigger: TTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC...ATTAAACTCTGTGTTACTGCTTTGGGACCCTGAGGTTGCTAGCGTACACTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558579.5
ENST00000558594.5
CDS-3UTR CAA 90 bp TTTGCTTTGAATCCTGTGAAGCTGCAACCCTGTAATCACAGCTACTTGGGAGGCGTAAGTTCATTTGCTTaGAATCCTGTGAAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: FALNPVKLQPCNHSYLGGVSSFA*NPVKLQ
Trigger: TTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC...GCCTCCCAAGTAGCTGTGATTACAGGGTTGCAGCTTCACAGGATTCAAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000560246.1
CDS-3UTR CAA 90 bp ACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGTCATACGTAAGTTCATTTGCTTaGAATCCTGTGAAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: TNVAAETLEQQVTCPKSYVSSFA*NPVKLQ
Trigger: TTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC...GTATGACTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CAA 90 bp AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAGCAACGTATATGCTCTaGGGTTGTTCAGAATCTTTA +
Preference number: 5 (lower is better)
Translates to: SINGTCGQAAQLSSKCAQATYML*GCSESL
Trigger: TAAAGATTCTGAACAACCCAAGAGCATATACGTTGC...TTGTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp ACAGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACTACTATAGTGCGACTTaGTTGCTAGTCTTGATAATC +
Preference number: 5 (lower is better)
Translates to: TVSMVPADKLPSFLANVHYYSAT*LLVLII
Trigger: GATTATCAAGACTAGCAACAAAGTCGCACTATAGTA...GTGCACATTTGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp CACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTCTTGGTAGCCTTTGCTaGGAGTATCCTAAAATCCTT +
Preference number: 5 (lower is better)
Translates to: HKAYYQRSDGSLAPEKQSLGSLC*EYPKIL
Trigger: AAGGATTTTAGGATACTCCAAGCAAAGGCTACCAAG...ACTTTGCTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS TCA 90 bp GAACGCAGTTTATGTAGGAACTTCTCAAAGTCCTGTTTCACTTCATaGGGTTTCTTGGTAGCCTTTGCTTGGAGTCTATCAAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ERSLCRNFSKSCFTS*GFLVAFAWSLSSSL
Trigger: CAAGGAGCTTGATAGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCCTACATAAACTGCGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560557.1
CDS-3UTR CAA 90 bp GTTAATTTTCCATTAGAGATTCAACCAACCACCGACCCAACCTGGAGTTTAATACGCTTCCCAATTTTGTaGTCCCAGCAAGAATCGGGA +
Preference number: 5 (lower is better)
Translates to: VNFPLEIQPTTDPTWSLIRFPIL*SQQESG
Trigger: TCCCGATTCTTGCTGGGACAACAAAATTGGGAAGCG...TATTAAACTCCAGGTTGGGTCGGTGGTTGGTTGAATCTCTAATGGAAAATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp CCAACACCTGCAGTTTTTCACTGTTTGGTTACCCTACAGGGATACTACCCCAAAGTAAGTTCATTTGCTTaGAATCCTGTGAAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: PTPAVFHCLVTLQGYYPKVSSFA*NPVKLQ
Trigger: TTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC...TTTGGGGTAGTATCCCTGTAGGGTAACCAAACAGTGAAAAACTGCAGGTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558579.5
CDS-3UTR CAA 90 bp GTTATTGCCAGTCATGAAATGGGAGGAGTACTGTTGACTTACCACTTGGAGTCATATTACAGTGGGTTATaGCCAGTCATGAAATGGGAG +
Preference number: 5 (lower is better)
Translates to: VIASHEMGGVLLTYHLESYYSGL*PVMKWE
Trigger: CTCCCATTTCATGACTGGCAATAACCCACTGTAATA...TGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCATTTCATGACTGGCAATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp AATTTTACAAATGTAGCAGCTGAGACTCTGGAACAGCAGGTAACTTGCCCGAAGAGGCTTCAATGTGAGTaGGGCGACCAAAAATCAAAA +
Preference number: 5 (lower is better)
Translates to: NFTNVAAETLEQQVTCPKRLQCE*GDQKSK
Trigger: TTTTGATTTTTGGTCGCCCAACTCACATTGAAGCCT...CTTCGGGCAAGTTACCTGCTGTTCCAGAGTCTCAGCTGCTACATTTGTAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CAA 90 bp GATTTACGTGTAAGCTTGCTATACAACTCTTCAAGTGGCTACTTTATGGAATCACCTTTGACATGTTCGTaGGCCTGCCATGGTACAGTA +
Preference number: 5 (lower is better)
Translates to: DLRVSLLYNSSSGYFMESPLTCS*ACHGTV
Trigger: TACTGTACCATGGCAGGCCAACGAACATGTCAAAGG...TGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp AAGTCTGAGAGAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCCTAGTCTTGATAATCTaGATTCTTCCTTGGATATGG +
Preference number: 5 (lower is better)
Translates to: KSERNYLGHLGIGRTFCALVLII*ILPWIW
Trigger: CCATATCCAAGGAAGAATCAAGATTATCAAGACTAG...GGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCTCAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp CACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTTATAGTGCGACTTTGTaGCTAGTCTTGATAATCTTG +
Preference number: 5 (lower is better)
Translates to: HKAYYQRSDGSLAPEKQSYSATL*LVLIIL
Trigger: CAAGATTATCAAGACTAGCAACAAAGTCGCACTATA...ACTTTGCTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp CACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTAATGTCCTAAAATGTTaGATGACACCTAAAAACCCC +
Preference number: 5 (lower is better)
Translates to: HKAYYQRSDGSLAPEKQSNVLKC*MTPKNP
Trigger: GGGGTTTTTAGGTGTCATCAAACATTTTAGGACATT...ACTTTGCTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp CACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTGATTTACGTGTAAGCTaGCTATACAACTCTTCAAGT +
Preference number: 5 (lower is better)
Translates to: HKAYYQRSDGSLAPEKQSDLRVS*LYNSSS
Trigger: ACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC...ACTTTGCTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp AAGTCTGAGAGAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCGCCATTGGGGAAAACTaGTATAAGACTGTACATTTT +
Preference number: 5 (lower is better)
Translates to: KSERNYLGHLGIGRTFCAAIGEN*YKTVHF
Trigger: AAAATGTACAGTCTTATACAAGTTTTCCCCAATGGC...GGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCTCAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTAGGCTTCAATGTGAGTaGGGCGACCAAACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLIRLQCE*GDQTKS
Trigger: GGACTTGGTTTGGTCGCCCAACTCACATTGAAGCCT...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS GCA 90 bp AAAATGCAAACTTTTCTCTGGGATCAACATTTCTTCACAACTCACTaGAACTACGCCTTGACAGTATGTTTCGAGAACCGCTTCCCAATT +
Preference number: 5 (lower is better)
Translates to: KMQTFLWDQHFFTTH*NYALTVCFENRFPI
Trigger: AATTGGGAAGCGGTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGTGAGTTGTGAAGAAATGTTGATCCCAGAGAAAAGTTTGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558615.5
ENST00000559905.5
ENST00000560246.1
ENST00000561064.5
CDS-3UTR CAA 90 bp TTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCAAAATGCAACTACGCCTaGACAGTATGTTTCGAGAAC +
Preference number: 5 (lower is better)
Translates to: FLANVHKAYYQRSDGSLAKCNYA*TVCFEN
Trigger: GTTCTCGAAACATACTGTCAAGGCGTAGTTGCATTT...TGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp CTTTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGACCTTTGACATGTTCGTaGGCCTGCCATGGTACAGTA +
Preference number: 5 (lower is better)
Translates to: LLKVGALFLILVVSISHRPLTCS*ACHGTV
Trigger: TACTGTACCATGGCAGGCCAACGAACATGTCAAAGG...TCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CAA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTCCTTTGACATGTTCGTaGGCCTGCCATGGTACAGTA +
Preference number: 5 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLIPLTCS*ACHGTV
Trigger: TACTGTACCATGGCAGGCCAACGAACATGTCAAAGG...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000561116.5
CDS-3UTR CAA 90 bp GATTTACGTGTAAGCTTGCTATACAACTCTTCAAGTGGCTACTTTATGGAATCACCGGAGAAGCAAAGTTaGTTTGCTACCAAACCTGGA +
Preference number: 5 (lower is better)
Translates to: DLRVSLLYNSSSGYFMESPEKQS*FATKPG
Trigger: TCCAGGTTTGGTAGCAAACAAACTTTGCTTCTCCGG...TGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp GATTTACGTGTAAGCTTGCTATACAACTCTTCAAGTGGCTACTTTATGGAATCACTGTTGACTTACCACTaGGAGTCAAAACCAGGGACT +
Preference number: 5 (lower is better)
Translates to: DLRVSLLYNSSSGYFMESLLTYH*ESKPGT
Trigger: AGTCCCTGGTTTTGACTCCAAGTGGTAAGTCAACAG...TGATTCCATAAAGTAGCCACTTGAAGAGTTGTATAGCAAGCTTACACGTAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTATGGGAGGAGTACTGTaGACTTACCACTTGGAGTCA +
Preference number: 5 (lower is better)
Translates to: TDPTWSLITRFLLISLFSMGGVL*TYHLES
Trigger: TGACTCCAAGTGGTAAGTCAACAGTACTCCTCCCAT...ACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp AAAAGAAACACCCAGAAGGGTTGTGAAGAAGGGCACTCACAACTTATTTCAGGAAATTCCCACAGACACTaGAAGACTCAAAAGAAACAC +
Preference number: 5 (lower is better)
Translates to: KRNTQKGCEEGHSQLISGNSHRH*KTQKKH
Trigger: GTGTTTCTTTTGAGTCTTCAAGTGTCTGTGGGAATT...TCCTGAAATAAGTTGTGAGTGCCCTTCTTCACAACCCTTCTGGGTGTTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558579.5
CDS TCA 90 bp GAACGCAGTTTATGTAGGAACTTCTCAAAGTCCTGTTTCACTTCATaGGGTTTCTTGGTAGCCTTTGCTTGGAGTATCCTAAAATCCTTT +
Preference number: 5 (lower is better)
Translates to: ERSLCRNFSKSCFTS*GFLVAFAWSILKSF
Trigger: AAAGGATTTTAGGATACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCCTACATAAACTGCGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTAACCGCTTCCCAATTTaGTTGTCCCAGCAAGAATCG +
Preference number: 5 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLINRFPI*LSQQES
Trigger: CGATTCTTGCTGGGACAACAAAATTGGGAAGCGGTT...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS-3UTR CAA 90 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTATGCTTCATGGAACGTaGCATATATGGCTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: TDPTWSLITRFLLISLFSMLHGT*HIWLVP
Trigger: TGGCACAAGCCATATATGCAACGTTCCATGAAGCAT...ACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp TTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCAAGTTGTAGTTGTCTGTaGATGATGGTGATGATGATG +
Preference number: 5 (lower is better)
Translates to: FLANVHKAYYQRSDGSLASCSCL*MMVMMM
Trigger: CATCATCATCACCATCATCAACAGACAACTACAACT...TGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp ATAGGGCCTTTCACTTTGGTTGAAATCTTAGGTTTGAAACTGTGCCTGGTTTACGAGCCAAGATCATGCTaGGACAGATCTTTTAAGAAT +
Preference number: 5 (lower is better)
Translates to: IGPFTLVEILGLKLCLVYEPRSC*DRSFKN
Trigger: ATTCTTAAAAGATCTGTCCAAGCATGATCTTGGCTC...GTAAACCAGGCACAGTTTCAAACCTAAGATTTCAACCAAAGTGAAAGGCCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS CCA 90 bp TGCTTGGAGTCTTTGTTGCTAGTCTTGATAATCTTGATTCTTCCTTaGATATGGGCAACGTATATGCTCTTGGGTTGTTCAGAATCTTTA +
Preference number: 5 (lower is better)
Translates to: CLESLLLVLIILILP*IWATYMLLGCSESL
Trigger: TAAAGATTCTGAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGACTCCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS-3UTR CAA 90 bp GTTAATTTTCCATTAGAGATTCAACCAACCACCGACCCAACCTGGAGTTTAATAGTAAGTTCATTTGCTTaGAATCCTGTGAAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: VNFPLEIQPTTDPTWSLIVSSFA*NPVKLQ
Trigger: TTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC...TATTAAACTCCAGGTTGGGTCGGTGGTTGGTTGAATCTCTAATGGAAAATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCCGTTGCATATATGGCTaGTGCCAAACAATCAGGATA +
Preference number: 5 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVRCIYG*CQTIRI
Trigger: TATCCTGATTGTTTGGCACAAGCCATATATGCAACG...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTCCATTCTCAGCTTTCTaGAAATTCTGCAACTACGCC +
Preference number: 5 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLIPFSAF*KFCNYA
Trigger: GGCGTAGTTGCAGAATTTCAAGAAAGCTGAGAATGG...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS CCA 90 bp TATAGTGCGACTTTGTTGCTAGTCTTGATAATCTTGATTCTTCCTTaGATATGGGCAACGTATATGCTCTTGGGTTGTTCAGAATCTTTA +
Preference number: 5 (lower is better)
Translates to: YSATLLLVLIILILP*IWATYMLLGCSESL
Trigger: TAAAGATTCTGAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGTCGCACTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTATTCTTCAATGCTCTTaGGAGGTTCTTGCATTTTCC +
Preference number: 5 (lower is better)
Translates to: TDPTWSLITRFLLISLFSILQCS*EVLAFS
Trigger: GGAAAATGCAAGAACCTCCAAAGAGCATTGAAGAAT...ACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS-3UTR CAA 90 bp TTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATCCGTTGCATATATGGCTaGTGCCAAACAATCAGGATA +
Preference number: 5 (lower is better)
Translates to: FKSRCPVPYISSEYKSQIRCIYG*CQTIRI
Trigger: TATCCTGATTGTTTGGCACAAGCCATATATGCAACG...GATCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CAA 90 bp ACCGACCCAACCTGGAGTTTAATAACACGCTTTTTGTTGATAAGTTTATTCAGTATAGGGCCTTTCACTTaGGTTGAAATCTTAGGTTTG +
Preference number: 5 (lower is better)
Translates to: TDPTWSLITRFLLISLFSIGPFT*VEILGL
Trigger: CAAACCTAAGATTTCAACCAAAGTGAAAGGCCCTAT...ACTGAATAAACTTATCAACAAAAAGCGTGTTATTAAACTCCAGGTTGGGTCGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS GCA 90 bp ATCTTCTTTAAATTCATCATTAAAGAGGTAACTCGATTCTGGAAATaGTTCATGGAACGTTGCATATATGGCTTGTGCCAAACAATCAGG +
Preference number: 5 (lower is better)
Translates to: IFFKFIIKEVTRFWK*FMERCIYGLCQTIR
Trigger: CCTGATTGTTTGGCACAAGCCATATATGCAACGTTCCATGAAGCATTTCCAGAATCGAGTTACCTCTTTAATGATGAATTTAAAGAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299338.11
ENST00000561064.5
CDS-3UTR CAA 90 bp TTTAAAAGTAGGTGCCCTGTTCCTTATATTAGTAGTGAGTATAAGTCACAGATCATTCTTCAATGCTCTTaGGAGGTTCTTGCATTTTCC +
Preference number: 5 (lower is better)
Translates to: FKSRCPVPYISSEYKSQIILQCS*EVLAFS
Trigger: GGAAAATGCAAGAACCTCCAAAGAGCATTGAAGAAT...GATCTGTGACTTATACTCACTACTAATATAAGGAACAGGGCACCTACTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS-3UTR CAA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTATTCTTCAATGCTCTTaGGAGGTTCTTGCATTTTCC +
Preference number: 5 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLIILQCS*EVLAFS
Trigger: GGAAAATGCAAGAACCTCCAAAGAGCATTGAAGAAT...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000561116.5
CDS-3UTR CAA 90 bp TCTTTCCTGCCAAATTTAATGCCCAAAGGATCAAATCTTGTTGAACACCTAATTGTAAGTTCATTTGCTTaGAATCCTGTGAAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: SFLPNLMPKGSNLVEHLIVSSFA*NPVKLQ
Trigger: TTGCAGCTTCACAGGATTCAAAGCAAATGAACTTAC...AATTAGGTGTTCAACAAGATTTGATCCTTTGGGCATTAAATTTGGCAGGAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558579.5
ENST00000558594.5
ENST00000561116.5
CDS-3UTR CAA 90 bp GTGGTCCTTTATATAGTTGTTGTCATCCCAATCAGATATATCTCATCTGATGTCAATCTTGATTCTTCCTaGGATATGGGCAACGTATAT +
Preference number: 5 (lower is better)
Translates to: VVLYIVVVIPIRYISSDVNLDSS*DMGNVY
Trigger: ATATACGTTGCCCATATCCAAGGAAGAATCAAGATT...GACATCAGATGAGATATATCTGATTGGGATGACAACAACTATATAAAGGACCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS GCA 90 bp ATCATTAAAGAGGTAACTCGATTCTGGAAATGCTTCATGGAACGTTaGATATATGGCTTGTGCCAAACAATCAGGATATATCCTAAATTT +
Preference number: 5 (lower is better)
Translates to: IIKEVTRFWKCFMER*IYGLCQTIRIYPKF
Trigger: AAATTTAGGATATATCCTGATTGTTTGGCACAAGCCATATATGCAACGTTCCATGAAGCATTTCCAGAATCGAGTTACCTCTTTAATGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS GCA 72 bp GCGAGGCTTGAGGCGGGTCCCGGACGAACGCGGCCCTaGCCCTCGCCGGAGCCTCTCGGGAGAAGTGCGACA +
Preference number: 6 (lower is better)
Translates to: ARLEAGPGRTRP*PSPEPLGRSAT
Trigger: TGTCGCACTTCTCCCGAGAGGCTCCGGCGAGGGGCAGGGCCGCGTTCGTCCGGGACCCGCCTCAAGCCTCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558862.2
ENST00000561064.5
CDS CAA 90 bp GTCCCAGCAAGAATCGGGAGGAAACTGGGTGAAAGGCTGCGAGGCTaGAGGCGGGTCCCGGACGAACGCGGCCCTGCCCCTCGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: VPARIGRKLGERLRG*RRVPDERGPAPRRS
Trigger: GCTCCGGCGAGGGGCAGGGCCGCGTTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTTCACCCAGTTTCCTCCCGATTCTTGCTGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558862.2
ENST00000561064.5
CDS TCA 72 bp GAATCGGGAGGAAACTGGGTGAAAGGCTGCGAGGCTTaGGGCGGGTCCCGGACGAACGCGGCCCTGCCCCTC +
Preference number: 6 (lower is better)
Translates to: ESGGNWVKGCEA*GGSRTNAALPL
Trigger: GAGGGGCAGGGCCGCGTTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTTCACCCAGTTTCCTCCCGATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558862.2
ENST00000561064.5
CDS CAA 72 bp AGAATCGGGAGGAAACTGGGTGAAAGGCTGCGAGGCTaGAGGCGGGTCCCGGACGAACGCGGCCCTGCCCCT +
Preference number: 6 (lower is better)
Translates to: RIGRKLGERLRG*RRVPDERGPAP
Trigger: AGGGGCAGGGCCGCGTTCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTTCACCCAGTTTCCTCCCGATTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558862.2
ENST00000561064.5
CDS TCA 72 bp TTTTGTTGTCCCAGCAAGAATCGGGAGGAAACTGGGTaGAAGGCTGCGAGGCTTGAGGCGGGTCCCGGACGA +
Preference number: 6 (lower is better)
Translates to: FCCPSKNREETG*KAARLEAGPGR
Trigger: TCGTCCGGGACCCGCCTCAAGCCTCGCAGCCTTTCACCCAGTTTCCTCCCGATTCTTGCTGGGACAACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000561064.5
CDS GCA 72 bp AAAGCTGTGGAAGCTTCCTTACCCCGGGGCCAGCTCTaGTGCTCCTCCTTTGACATGTTCGTTGGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: KAVEASLPRGQL*CSSFDMFVGLP
Trigger: TGGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGGTAAGGAAGCTTCCACAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557892.1
CDS GCA 72 bp TTGGAGGTTCTTGCATTTTCCCGGGGCCAGCTCTGCTaGTCCTCCTTTGACATGTTCGTTGGCCTGCCATGG +
Preference number: 6 (lower is better)
Translates to: LEVLAFSRGQLC*SSFDMFVGLPW
Trigger: CCATGGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGAAAATGCAAGAACCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299338.11
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000559905.5
ENST00000560246.1
ENST00000561064.5
ENST00000561116.5
CDS GCA 72 bp TCTTTGGAGGTTCTTGCATTTTCCCGGGGCCAGCTCTaGTGCTCCTCCTTTGACATGTTCGTTGGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: SLEVLAFSRGQL*CSSFDMFVGLP
Trigger: TGGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGAAAATGCAAGAACCTCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000299338.11
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000559905.5
ENST00000560246.1
ENST00000561064.5
ENST00000561116.5
ENST00000561319.5
CDS TCA 72 bp CCAAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGATGGTGATTTCTGCATTTCCA +
Preference number: 6 (lower is better)
Translates to: PNRNSSGLQLPA*ATQKMVISAFP
Trigger: TGGAAATGCAGAAATCACCATCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS CAA 90 bp TGGAGGTTCTTGCATTTTCCCGGGGCCAGCTCTGCTGCTCCTCCTTaGACATGTTCGTTGGCCTGCCATGGTACAGTAACTTTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: WRFLHFPGASSAAPP*TCSLACHGTVTLQK
Trigger: TTTCTGCAAAGTTACTGTACCATGGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGAAAATGCAAGAACCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299338.11
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000559905.5
ENST00000560246.1
ENST00000561064.5
ENST00000561116.5
CDS CCA 72 bp TCTGTGCAGCGAGCATTAAGACCTAGACCAAACCCTTaGTGTTTCAGTGACAAAGCCAGCTCTACCTGGGAG +
Preference number: 6 (lower is better)
Translates to: SVQRALRPRPNP*CFSDKASSTWE
Trigger: CTCCCAGGTAGAGCTGGCTTTGTCACTGAAACACCAAGGGTTTGGTCTAGGTCTTAATGCTCGCTGCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557892.1
CDS CAA 90 bp AACTACGCCTTGACAGTATGTTTCGAGAACCGCTTCCCAATTTTGTaGTCCCAGCAAGAATCGGGAGGAAACTGGGTGAAAGGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: NYALTVCFENRFPIL*SQQESGGNWVKGCE
Trigger: CTCGCAGCCTTTCACCCAGTTTCCTCCCGATTCTTGCTGGGACAACAAAATTGGGAAGCGGTTCTCGAAACATACTGTCAAGGCGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000560246.1
ENST00000561064.5
CDS CAA 90 bp TGCAACTACGCCTTGACAGTATGTTTCGAGAACCGCTTCCCAATTTaGTTGTCCCAGCAAGAATCGGGAGGAAACTGGGTGAAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: CNYALTVCFENRFPI*LSQQESGGNWVKGC
Trigger: GCAGCCTTTCACCCAGTTTCCTCCCGATTCTTGCTGGGACAACAAAATTGGGAAGCGGTTCTCGAAACATACTGTCAAGGCGTAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000560246.1
ENST00000561064.5
CDS CAA 72 bp GCCTTGACAGTATGTTTCGAGAACCGCTTCCCAATTTaGTTGTCCCAGCAAGAATCGGGAGGAAACTGGGTG +
Preference number: 6 (lower is better)
Translates to: ALTVCFENRFPI*LSQQESGGNWV
Trigger: CACCCAGTTTCCTCCCGATTCTTGCTGGGACAACAAAATTGGGAAGCGGTTCTCGAAACATACTGTCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000560246.1
ENST00000561064.5
CDS TCA 72 bp AGCGACGCAGAAGATGGTGATTTCTGCATTTCCATCTaGGGTACCAGGTTCATCTCACTGGAAAATCGTGTC +
Preference number: 6 (lower is better)
Translates to: SDAEDGDFCISI*GTRFISLENRV
Trigger: GACACGATTTTCCAGTGAGATGAACCTGGTACCTCAGATGGAAATGCAGAAATCACCATCTTCTGCGTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS GCA 72 bp GAGATGGATTTGAGACTGATCTCCCATCTCCTCGGCTaGAGCACCCTATTAAAGCTTTCTTCCTTGGCAATA +
Preference number: 6 (lower is better)
Translates to: EMDLRLISHLLG*STLLKLSSLAI
Trigger: TATTGCCAAGGAAGAAAGCTTTAATAGGGTGCTGCAGCCGAGGAGATGGGAGATCAGTCTCAAATCCATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557892.1
CDS CCA 72 bp AGAGAAATCAGCTGGGTCTTAGGCTTCAATGTGAGTTaGGCGACCAAATGCAACTACGCCTTGACAGTATGT +
Preference number: 6 (lower is better)
Translates to: REISWVLGFNVS*ATKCNYALTVC
Trigger: ACATACTGTCAAGGCGTAGTTGCATTTGGTCGCCCAACTCACATTGAAGCCTAAGACCCAGCTGATTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558862.2
CDS CAA 72 bp AAGAGAAATCAGCTGGGTCTTAGGCTTCAATGTGAGTaGGGCGACCAAATGCAACTACGCCTTGACAGTATG +
Preference number: 6 (lower is better)
Translates to: KRNQLGLRLQCE*GDQMQLRLDSM
Trigger: CATACTGTCAAGGCGTAGTTGCATTTGGTCGCCCAACTCACATTGAAGCCTAAGACCCAGCTGATTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558862.2
CDS TCA 72 bp TCGTTGGCCTGCCATGGTACAGTAACTTTGCAGAAATaGAGAGAAATCAGCTGGGTCTTAGGCTTCAATGTG +
Preference number: 6 (lower is better)
Translates to: SLACHGTVTLQK*REISWVLGFNV
Trigger: CACATTGAAGCCTAAGACCCAGCTGATTTCTCTTCATTTCTGCAAAGTTACTGTACCATGGCAGGCCAACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000559905.5
ENST00000560246.1
ENST00000561064.5
ENST00000561116.5
CDS CCA 72 bp TGCTGCTCCTCCTTTGACATGTTCGTTGGCCTGCCATaGTACAGTAACTTTGCAGAAATGAAGAGAAATCAG +
Preference number: 6 (lower is better)
Translates to: CCSSFDMFVGLP*YSNFAEMKRNQ
Trigger: CTGATTTCTCTTCATTTCTGCAAAGTTACTGTACCATGGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000559905.5
ENST00000560246.1
ENST00000561064.5
ENST00000561116.5
CDS CCA 72 bp AGAGAAATCAGCTGGGTCTTAGGCTTCAATGTGAGTTaGGCGACCAAACCAAGTCCGAAAAAGAAGCCTTTA +
Preference number: 6 (lower is better)
Translates to: REISWVLGFNVS*ATKPSPKKKPL
Trigger: TAAAGGCTTCTTTTTCGGACTTGGTTTGGTCGCCCAACTCACATTGAAGCCTAAGACCCAGCTGATTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000559905.5
CDS CCA 72 bp TATACAAGGGCATACATACCAGAAAGCAGGGATCACTaGAAGCCATTTTACAGGCTGCCTGATCCAAGTCAT +
Preference number: 6 (lower is better)
Translates to: YTRAYIPESRDH*KPFYRLPDPSH
Trigger: ATGACTTGGATCAGGCAGCCTGTAAAATGGCTTCCAGTGATCCCTGCTTTCTGGTATGTATGCCCTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559351.1
CDS CAA 72 bp TTGACAGTATGTTTCGAGAACCGCTTCCCAATTTTGTaGTCCCAGCAAGAATCGGGAGGAAACTGGGTGAAA +
Preference number: 6 (lower is better)
Translates to: LTVCFENRFPIL*SQQESGGNWVK
Trigger: TTTCACCCAGTTTCCTCCCGATTCTTGCTGGGACAACAAAATTGGGAAGCGGTTCTCGAAACATACTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558594.5
ENST00000558615.5
ENST00000558862.2
ENST00000560246.1
ENST00000561064.5
CDS CAA 72 bp TTCAATGTGAGTTGGGCGACCAAATGCAACTACGCCTaGACAGTATGTTTCGAGAACCGCTTCCCAATTTTG +
Preference number: 6 (lower is better)
Translates to: FNVSWATKCNYA*TVCFENRFPIL
Trigger: CAAAATTGGGAAGCGGTTCTCGAAACATACTGTCAAGGCGTAGTTGCATTTGGTCGCCCAACTCACATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299338.11
ENST00000557892.1
ENST00000558862.2
CDS CAA 72 bp AAGAGAAATCAGCTGGGTCTTAGGCTTCAATGTGAGTaGGGCGACCAAACCAAGTCCGAAAAAGAAGCCTTT +
Preference number: 6 (lower is better)
Translates to: KRNQLGLRLQCE*GDQTKSEKEAF
Trigger: AAAGGCTTCTTTTTCGGACTTGGTTTGGTCGCCCAACTCACATTGAAGCCTAAGACCCAGCTGATTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558594.5
ENST00000559905.5
CDS CAA 90 bp TTTCTCTGGGATCAACATTTCTTCACAACTCACTGCAACTACGCCTaGACAGTATGTTTCGAGAACCGCTTCCCAATTTTGTTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: FLWDQHFFTTHCNYA*TVCFENRFPILLSQ
Trigger: CTGGGACAACAAAATTGGGAAGCGGTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGTGAGTTGTGAAGAAATGTTGATCCCAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558615.5
ENST00000560246.1
ENST00000561064.5
CDS CAA 90 bp ATGGGCAACGTATATGCTCTTGGGTTGTTCAGAATCTTTATAATATaGAAGTCGATACCAAAACTGGGGGCGAGGAGCCAAGATGGCCAA +
Preference number: 6 (lower is better)
Translates to: MGNVYALGLFRIFII*KSIPKLGARSQDGQ
Trigger: TTGGCCATCTTGGCTCCTCGCCCCCAGTTTTGGTATCGACTTCAATATTATAAAGATTCTGAACAACCCAAGAGCATATACGTTGCCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS GCA 72 bp ACTTTTCTCTGGGATCAACATTTCTTCACAACTCACTaGAACTACGCCTTGACAGTATGTTTCGAGAACCGC +
Preference number: 6 (lower is better)
Translates to: TFLWDQHFFTTH*NYALTVCFENR
Trigger: GCGGTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGTGAGTTGTGAAGAAATGTTGATCCCAGAGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558615.5
ENST00000559905.5
ENST00000560246.1
ENST00000561064.5
CDS CCA 72 bp AGAGAAATCAGCTGGGTCTTAGGCTTCAATGTGAGTTaGGCGACCAAAAATCAAAATATCTTTGAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: REISWVLGFNVS*ATKNQNIFEVG
Trigger: GCCCACCTCAAAGATATTTTGATTTTTGGTCGCCCAACTCACATTGAAGCCTAAGACCCAGCTGATTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000558615.5
ENST00000560246.1
ENST00000561064.5
CDS CAA 72 bp GATCAACATTTCTTCACAACTCACTGCAACTACGCCTaGACAGTATGTTTCGAGAACCGCTTCCCAATTTTG +
Preference number: 6 (lower is better)
Translates to: DQHFFTTHCNYA*TVCFENRFPIL
Trigger: CAAAATTGGGAAGCGGTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGTGAGTTGTGAAGAAATGTTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558615.5
ENST00000559905.5
ENST00000560246.1
ENST00000561064.5
CDS CAA 72 bp CTTGGTAGCCTTTGCTTGGAGTCTTTGTTGCTAGTCTaGATAATCTTGATTCTTCCTTGGATATGGGCAACG +
Preference number: 6 (lower is better)
Translates to: LGSLCLESLLLV*IILILPWIWAT
Trigger: CGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGACTCCAAGCAAAGGCTACCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS CAA 72 bp CCATTCTCAGCTTTCTTGAAATTCTGCAACTACGCCTaGACAGTATGTTTCGAGAACCGCTTCCCAATTTTG +
Preference number: 6 (lower is better)
Translates to: PFSAFLKFCNYA*TVCFENRFPIL
Trigger: CAAAATTGGGAAGCGGTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGAATTTCAAGAAAGCTGAGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558594.5
CDS CAA 90 bp CTTGGTAGCCTTTGCTTGGAGTCTTTGTTGCTAGTCTTGATAATCTaGATTCTTCCTTGGATATGGGCAACGTATATGCTCTTGGGTTGT +
Preference number: 6 (lower is better)
Translates to: LGSLCLESLLLVLII*ILPWIWATYMLLGC
Trigger: ACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGACTCCAAGCAAAGGCTACCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS TCA 72 bp ATCAACATTTCTTCACAACTCACTGCAACTACGCCTTaGCAGTATGTTTCGAGAACCGCTTCCCAATTTTGT +
Preference number: 6 (lower is better)
Translates to: INISSQLTATTP*QYVSRTASQFC
Trigger: ACAAAATTGGGAAGCGGTTCTCGAAACATACTGTCAAGGCGTAGTTGCAGTGAGTTGTGAAGAAATGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558615.5
ENST00000560246.1
ENST00000561064.5
CDS CAA 72 bp GACCAGTACTACTATAGTGCGACTTTGTTGCTAGTCTaGATAATCTTGATTCTTCCTTGGATATGGGCAACG +
Preference number: 6 (lower is better)
Translates to: DQYYYSATLLLV*IILILPWIWAT
Trigger: CGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGTCGCACTATAGTAGTACTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS CAA 90 bp GACCAGTACTACTATAGTGCGACTTTGTTGCTAGTCTTGATAATCTaGATTCTTCCTTGGATATGGGCAACGTATATGCTCTTGGGTTGT +
Preference number: 6 (lower is better)
Translates to: DQYYYSATLLLVLII*ILPWIWATYMLLGC
Trigger: ACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGTCGCACTATAGTAGTACTGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS CAA 90 bp CTGGTTTCTCTTAGTATTCTTCTTCCTCAAAGTTGTAGTTGTCTGTaGATGATGGTGATGATGATGATGATGACGATAGTGATGCCACAC +
Preference number: 6 (lower is better)
Translates to: LVSLSILLPQSCSCL*MMVMMMMMTIVMPH
Trigger: GTGTGGCATCACTATCGTCATCATCATCATCATCACCATCATCAACAGACAACTACAACTTTGAGGAAGAAGAATACTAAGAGAAACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299338.11
ENST00000559573.3
ENST00000560557.1
CDS CAA 72 bp AGAGGTAACTCGATTCTGGAAATGCTTCATGGAACGTaGCATATATGGCTTGTGCCAAACAATCAGGATATA +
Preference number: 6 (lower is better)
Translates to: RGNSILEMLHGT*HIWLVPNNQDI
Trigger: TATATCCTGATTGTTTGGCACAAGCCATATATGCAACGTTCCATGAAGCATTTCCAGAATCGAGTTACCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299338.11
ENST00000561064.5
CDS CAA 72 bp GACTTTGTTGCTAGTCTTGATAATCTTGATTCTTCCTaGGATATGGGCAACGTATATGCTCTTGGGTTGTTC +
Preference number: 6 (lower is better)
Translates to: DFVASLDNLDSS*DMGNVYALGLF
Trigger: GAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS CAA 72 bp GTCTTTGTTGCTAGTCTTGATAATCTTGATTCTTCCTaGGATATGGGCAACGTATATGCTCTTGGGTTGTTC +
Preference number: 6 (lower is better)
Translates to: VFVASLDNLDSS*DMGNVYALGLF
Trigger: GAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS CAA 72 bp CTTTGCTTGGAGTCTTTGTTGCTAGTCTTGATAATCTaGATTCTTCCTTGGATATGGGCAACGTATATGCTC +
Preference number: 6 (lower is better)
Translates to: LCLESLLLVLII*ILPWIWATYML
Trigger: GAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGACTCCAAGCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS CAA 90 bp TTGCTTGGAGTCTTTGTTGCTAGTCTTGATAATCTTGATTCTTCCTaGGATATGGGCAACGTATATGCTCTTGGGTTGTTCAGAATCTTT +
Preference number: 6 (lower is better)
Translates to: LLGVFVASLDNLDSS*DMGNVYALGLFRIF
Trigger: AAAGATTCTGAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGACTCCAAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS CCA 72 bp TTGCTAGTCTTGATAATCTTGATTCTTCCTTGGATATaGGCAACGTATATGCTCTTGGGTTGTTCAGAATCT +
Preference number: 6 (lower is better)
Translates to: LLVLIILILPWI*ATYMLLGCSES
Trigger: AGATTCTGAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299338.11
ENST00000559573.3
CDS CCA 72 bp ACTTTGTTGCTAGTCTTGATAATCTTGATTCTTCCTTaGATATGGGCAACGTATATGCTCTTGGGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: TLLLVLIILILP*IWATYMLLGCS
Trigger: TGAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS CCA 72 bp TCTTTGTTGCTAGTCTTGATAATCTTGATTCTTCCTTaGATATGGGCAACGTATATGCTCTTGGGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: SLLLVLIILILP*IWATYMLLGCS
Trigger: TGAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS CAA 72 bp TACTATAGTGCGACTTTGTTGCTAGTCTTGATAATCTaGATTCTTCCTTGGATATGGGCAACGTATATGCTC +
Preference number: 6 (lower is better)
Translates to: YYSATLLLVLII*ILPWIWATYML
Trigger: GAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGTCGCACTATAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS CAA 90 bp AATCTTGATTCTTCCTTGGATATGGGCAACGTATATGCTCTTGGGTaGTTCAGAATCTTTATAATATTGAAGTCGATACCAAAACTGGGG +
Preference number: 6 (lower is better)
Translates to: NLDSSLDMGNVYALG*FRIFIILKSIPKLG
Trigger: CCCCAGTTTTGGTATCGACTTCAATATTATAAAGATTCTGAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS GCA 72 bp AAATTCATCATTAAAGAGGTAACTCGATTCTGGAAATaGTTCATGGAACGTTGCATATATGGCTTGTGCCAA +
Preference number: 6 (lower is better)
Translates to: KFIIKEVTRFWK*FMERCIYGLCQ
Trigger: TTGGCACAAGCCATATATGCAACGTTCCATGAAGCATTTCCAGAATCGAGTTACCTCTTTAATGATGAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299338.11
ENST00000561064.5
CDS GCA 72 bp GAATATCTTAGTGAGTTTAATCTTGGTTTTCTTAGGTaGTTTGGAAATACCAGCCAGCTCATGCATCTTAAG +
Preference number: 6 (lower is better)
Translates to: EYLSEFNLGFLR*FGNTSQLMHLK
Trigger: CTTAAGATGCATGAGCTGGCTGGTATTTCCAAAGCACCTAAGAAAACCAAGATTAAACTCACTAAGATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS GCA 72 bp TGGAAATGCTTCATGGAACGTTGCATATATGGCTTGTaGCAAACAATCAGGATATATCCTAAATTTATGGAG +
Preference number: 6 (lower is better)
Translates to: WKCFMERCIYGL*QTIRIYPKFME
Trigger: CTCCATAAATTTAGGATATATCCTGATTGTTTGGCACAAGCCATATATGCAACGTTCCATGAAGCATTTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5
CDS CAA 72 bp TCTTCCTTGGATATGGGCAACGTATATGCTCTTGGGTaGTTCAGAATCTTTATAATATTGAAGTCGATACCA +
Preference number: 6 (lower is better)
Translates to: SSLDMGNVYALG*FRIFIILKSIP
Trigger: TGGTATCGACTTCAATATTATAAAGATTCTGAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559573.3
CDS CAA 72 bp TCTTCCTTGGATATGGGCAACGTATATGCTCTTGGGTaGTTCAGAATCTTTATAATATTGAAGTCGATACTA +
Preference number: 6 (lower is better)
Translates to: SSLDMGNVYALG*FRIFIILKSIL
Trigger: TAGTATCGACTTCAATATTATAAAGATTCTGAACAACCCAAGAGCATATACGTTGCCCATATCCAAGGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299338.11
CDS CAA 72 bp TTCTGGAAATGCTTCATGGAACGTTGCATATATGGCTaGTGCCAAACAATCAGGATATATCCTAAATTTATG +
Preference number: 6 (lower is better)
Translates to: FWKCFMERCIYG*CQTIRIYPKFM
Trigger: CATAAATTTAGGATATATCCTGATTGTTTGGCACAAGCCATATATGCAACGTTCCATGAAGCATTTCCAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561064.5