RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM227A (Homo sapiens)

Ensembl gene IDs: ENSG00000184949

Ensembl transcript IDs: ENST00000355830.11, ENST00000424706.5, ENST00000484582.1, ENST00000490082.1, ENST00000535113.6, ENST00000535113.7, ENST00000540952.6, ENST00000541689.6, ENST00000543295.1, ENST00000543828.1, ENST00000544346.5, ENST00000608409.5

Found 547 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGCAGAGGCTCTCTCTGGGGTTGCGGGGATGGTGGCCCTTAGCTTaGGGCTGGATCAGTGAGGATTTGTCAATCGGGCAGGGCGGGAAA +
Preference number: 1 (lower is better)
Translates to: KQRLSLGLRGWWPLA*GWISEDLSIGQGGK
Trigger: TTTCCCGCCCTGCCCGATTGACAAATCCTCACTGATCCAGCCCCAAGCTAAGGGCCACCATCCCCGCAACCCCAGAGAGAGCCTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 90 bp TTCAGCCCAGCTGCTGGTCCTTTGGCAAACCAACCCCTGTGCCTGTaGCCCTCAGTGAAATATCTTCTGTCCCAAAGGGCTGCTGGCACA +
Preference number: 1 (lower is better)
Translates to: FSPAAGPLANQPLCL*PSVKYLLSQRAAGT
Trigger: TGTGCCAGCAGCCCTTTGGGACAGAAGATATTTCACTGAGGGGCACAGGCACAGGGGTTGGTTTGCCAAAGGACCAGCAGCTGGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 90 bp ATGCCCTTCAGCCCAGCTGCTGGTCCTTTGGCAAACCAACCCCTGTaGCTGTGCCCCTCAGTGAAATATCTTCTGTCCCAAAGGGCTGCT +
Preference number: 1 (lower is better)
Translates to: MPFSPAAGPLANQPL*LCPSVKYLLSQRAA
Trigger: AGCAGCCCTTTGGGACAGAAGATATTTCACTGAGGGGCACAGGCACAGGGGTTGGTTTGCCAAAGGACCAGCAGCTGGGCTGAAGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp CTGCTGGTCCTTTGGCAAACCAACCCCTGTGCCTGTGCCCCTCAGTaGAATATCTTCTGTCCCAAAGGGCTGCTGGCACACTGGCTTCAT +
Preference number: 1 (lower is better)
Translates to: LLVLWQTNPCACAPQ*NIFCPKGLLAHWLH
Trigger: ATGAAGCCAGTGTGCCAGCAGCCCTTTGGGACAGAAGATATTTCACTGAGGGGCACAGGCACAGGGGTTGGTTTGCCAAAGGACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 90 bp CTGTTGGAGCATAATGCAGTGGAGCACTTGTGCCTACCTTGCTCCTaGTATATTAGGGAAGGCTCCCAAGATGAGGGACGTCTAAGCGGG +
Preference number: 1 (lower is better)
Translates to: LLEHNAVEHLCLPCS*YIREGSQDEGRLSG
Trigger: CCCGCTTAGACGTCCCTCATCTTGGGAGCCTTCCCTAATATACCAGGAGCAAGGTAGGCACAAGTGCTCCACTGCATTATGCTCCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp ACTGCAAATGAAGAGTTGACAGTGGCTGGGGTAGTAAAGGGAAGGTaGGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTC +
Preference number: 1 (lower is better)
Translates to: TANEELTVAGVVKGR*ESVLLICPTWCLVL
Trigger: GAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTTCCCTTTACTACCCCAGCCACTGTCAACTCTTCATTTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp AGTGCCTCCCACAGATTCATGCATCCACTCCTCACACAGACACCATaGGGCACAACAATTATCACCCCTATTTACACGATGGAACTGGGG +
Preference number: 1 (lower is better)
Translates to: SASHRFMHPLLTQTP*GTTIITPIYTMELG
Trigger: CCCCAGTTCCATCGTGTAAATAGGGGTGATAATTGTTGTGCCTCATGGTGTCTGTGTGAGGAGTGGATGCATGAATCTGTGGGAGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 90 bp CACCATGAGGCACAACAATTATCACCCCTATTTACACGATGGAACTaGGGCACCAGGAGGTTAAGTAACTTGCCTGAGGCTCACAGTCTG +
Preference number: 1 (lower is better)
Translates to: HHEAQQLSPLFTRWN*GTRRLSNLPEAHSL
Trigger: CAGACTGTGAGCCTCAGGCAAGTTACTTAACCTCCTGGTGCCCCAGTTCCATCGTGTAAATAGGGGTGATAATTGTTGTGCCTCATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 90 bp CACAGACACCATGAGGCACAACAATTATCACCCCTATTTACACGATaGAACTGGGGCACCAGGAGGTTAAGTAACTTGCCTGAGGCTCAC +
Preference number: 1 (lower is better)
Translates to: HRHHEAQQLSPLFTR*NWGTRRLSNLPEAH
Trigger: GTGAGCCTCAGGCAAGTTACTTAACCTCCTGGTGCCCCAGTTCCATCGTGTAAATAGGGGTGATAATTGTTGTGCCTCATGGTGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 90 bp GAAATATCTTCTGTCCCAAAGGGCTGCTGGCACACTGGCTTCATCTaGCTTGGTTTTTCTCAGATTCCACGCAGCTTTCTATCGGAGCAT +
Preference number: 1 (lower is better)
Translates to: EISSVPKGCWHTGFI*LGFSQIPRSFLSEH
Trigger: ATGCTCCGATAGAAAGCTGCGTGGAATCTGAGAAAAACCAAGGCAGATGAAGCCAGTGTGCCAGCAGCCCTTTGGGACAGAAGATATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp TCAAGAAAGCACGTTCAGAAAGGTCAAGATGCACAGCTACTATGCTaGGTCACACATCCATATGGTGAAGCAGGGCAGGGATTCAAAGGC +
Preference number: 1 (lower is better)
Translates to: SRKHVQKGQDAQLLC*VTHPYGEAGQGFKG
Trigger: GCCTTTGAATCCCTGCCCTGCTTCACCATATGGATGTGTGACTCAGCATAGTAGCTGTGCATCTTGACCTTTCTGAACGTGCTTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 90 bp CATATGGTGAAGCAGGGCAGGGATTCAAAGGCCCAAATTTTCTCATaGCAAAGCCTAAGCTCCTTCTCTCTTACCTTTCCTTCATCCCCT +
Preference number: 1 (lower is better)
Translates to: HMVKQGRDSKAQIFS*QSLSSFSLTFPSSP
Trigger: AGGGGATGAAGGAAAGGTAAGAGAGAAGGAGCTTAGGCTTTGGCATGAGAAAATTTGGGCCTTTGAATCCCTGCCCTGCTTCACCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 90 bp TCATCTAATCCTCACAACAACCCTCCTAGGCAGGCATTCCCTTTCTaGAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGCACAGCTAC +
Preference number: 1 (lower is better)
Translates to: SSNPHNNPPRQAFPF*SQESTFRKVKMHSY
Trigger: GTAGCTGTGCATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCTAGGAGGGTTGTTGTGAGGATTAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp AGGTCAAGATGCACAGCTACTATGCTGAGTCACACATCCATATGGTaGAGCAGGGCAGGGATTCAAAGGCCCAAATTTTCTCATGCCAAA +
Preference number: 1 (lower is better)
Translates to: RSRCTATMLSHTSIW*SRAGIQRPKFSHAK
Trigger: TTTGGCATGAGAAAATTTGGGCCTTTGAATCCCTGCCCTGCTTCACCATATGGATGTGTGACTCAGCATAGTAGCTGTGCATCTTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp AAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTaGCAGACAGAAATGCAGTTTGTCCTGGGCTTAGAAAATAAGGAG +
Preference number: 1 (lower is better)
Translates to: KGPCRDDLGLCNKWS*QTEMQFVLGLENKE
Trigger: CTCCTTATTTTCTAAGCCCAGGACAAACTGCATTTCTGTCTGTCAGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp GGGTCACCTAGAGTTCTACTCAGGATTCAAGTAAAGATGTGTGTCTaGGGGATGAGCTACATTTCCCAAGATCTGCTTATCTGCTGCTTG +
Preference number: 1 (lower is better)
Translates to: GSPRVLLRIQVKMCV*GMSYISQDLLICCL
Trigger: CAAGCAGCAGATAAGCAGATCTTGGGAAATGTAGCTCATCCCTCAGACACACATCTTTACTTGAATCCTGAGTAGAACTCTAGGTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 90 bp TCGGAAACCTTTCTAAACCTGGGCTTGCTGCTGCGTAAAATGCAGTaGATAATCCCTACTTCATACGGCTGGTATGAAAGTTTTACCTTT +
Preference number: 1 (lower is better)
Translates to: SETFLNLGLLLRKMQ*IIPTSYGWYESFTF
Trigger: AAAGGTAAAACTTTCATACCAGCCGTATGAAGTAGGGATTATCCACTGCATTTTACGCAGCAGCAAGCCCAGGTTTAGAAAGGTTTCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp AATGTTTACAAAGGGCAGAGACAGGTTTCTTCATATTTAACATCCTaGGAGGCTACAACTCTGAGTCCTCAGTCATTTCTGGAAAGGGTC +
Preference number: 1 (lower is better)
Translates to: NVYKGQRQVSSYLTS*EATTLSPQSFLERV
Trigger: GACCCTTTCCAGAAATGACTGAGGACTCAGAGTTGTAGCCTCTCAGGATGTTAAATATGAAGAAACCTGTCTCTGCCCTTTGTAAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp GAGTTTCGGTATCTGAAAACCAAGAATAATATCGGCGCTGAGTTGTaGGAATTAAATGGGTTAATACACATGAAGTATGTGGGCTCCTGT +
Preference number: 1 (lower is better)
Translates to: EFRYLKTKNNIGAEL*ELNGLIHMKYVGSC
Trigger: ACAGGAGCCCACATACTTCATGTGTATTAACCCATTTAATTCTCACAACTCAGCGCCGATATTATTCTTGGTTTTCAGATACCGAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 90 bp ACGTTTGACGTGCTTCAAATATGGCAATTATTATTAATGCCCAAATaGTCCTCTCTTTTAGCTAATGGGATTGTCTCTAAGTTTGCTCCC +
Preference number: 1 (lower is better)
Translates to: TFDVLQIWQLLLMPK*SSLLANGIVSKFAP
Trigger: GGGAGCAAACTTAGAGACAATCCCATTAGCTAAAAGAGAGGACCATTTGGGCATTAATAATAATTGCCATATTTGAAGCACGTCAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp AATTTCAAAATTAAAGGAGAGAGGCCAAAAGGAACGAGTATTTGTTaGACACCCAATAATGATCATGATAGCCAGTACATGCTGCACTTA +
Preference number: 1 (lower is better)
Translates to: NFKIKGERPKGTSIC*TPNNDHDSQYMLHL
Trigger: TAAGTGCAGCATGTACTGGCTATCATGATCATTATTGGGTGTTCAACAAATACTCGTTCCTTTTGGCCTCTCTCCTTTAATTTTGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 90 bp AGTCATTTATTACCATTACCCCAGTATTGTGTACTATATTTTATATaGCTGGCAGGCAACACAGTACATTTGTTCACACCAACATCACCA +
Preference number: 1 (lower is better)
Translates to: SHLLPLPQYCVLYFI*LAGNTVHLFTPTSP
Trigger: TGGTGATGTTGGTGTGAACAAATGTACTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTAATAAATGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 90 bp CAATATGAACTTACAGGTGAGAACACGTTTGACGTGCTTCAAATATaGCAATTATTATTAATGCCCAAATGGTCCTCTCTTTTAGCTAAT +
Preference number: 1 (lower is better)
Translates to: QYELTGENTFDVLQI*QLLLMPKWSSLLAN
Trigger: ATTAGCTAAAAGAGAGGACCATTTGGGCATTAATAATAATTGCCATATTTGAAGCACGTCAAACGTGTTCTCACCTGTAAGTTCATATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 90 bp ATTTATTACCATTACCCCAGTATTGTGTACTATATTTTATATGACTaGCAGGCAACACAGTACATTTGTTCACACCAACATCACCACAAA +
Preference number: 1 (lower is better)
Translates to: IYYHYPSIVYYILYD*QATQYICSHQHHHK
Trigger: TTTGTGGTGATGTTGGTGTGAACAAATGTACTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTAATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGGTCCCAAAGGGCTGCTaGCACACTGGCTTCATCTGC +
Preference number: 2 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLVPKGC*HTGFIC
Trigger: GCAGATGAAGCCAGTGTGCCAGCAGCCCTTTGGGAC...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGGCTGGCAATCCCAGTaGTTAGAGGAGCAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: KVRECSAYLPHMVPCTRQGWQSQ*LEEQEA
Trigger: TGCCTCCTGCTCCTCTAACCACTGGGATTGCCAGCC...CTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGCAATAGCATGGTCTTaGCTCACTGCAACCTCCGCC +
Preference number: 2 (lower is better)
Translates to: KVRECSAYLPHMVPCTRQAIAWS*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAAGACCATGCTATTGC...CTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGCCAACTCTCTACTCCTaGTTTTCACTCAGCCTAGGA +
Preference number: 2 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLPTLYS*FSLSLG
Trigger: TCCTAGGCTGAGTGAAAAGCAGGAGTAGAGAGTTGG...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAGGGACTACAGGCAGCTaGCACCACACCCGGCTAATT +
Preference number: 2 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLGTTGS*HHTRLI
Trigger: AATTAGCCGGGTGTGGTGGCAGCTGCCTGTAGTCCC...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTGCCCTTCAGCCCAGCTaGTGGTCCTTTGGCAAACCA +
Preference number: 2 (lower is better)
Translates to: FLERVHAGMILDCATNGPALQPS*WSFGKP
Trigger: TGGTTTGCCAAAGGACCAGCAGCTGGGCTGAAGGGC...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGAGCAGAGGCTCTCTCTaGGGTTGCGGGGATGGTGGC +
Preference number: 2 (lower is better)
Translates to: SREDNAERDNHHTRQDERSRGSL*GCGDGG
Trigger: GCCACCATCCCCGCAACCCCAGAGAGAGCCTCTGCT...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CAA 90 bp AGGGAAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTaGTACTCGGCAGGTGCTCACACGTTCTGGTTTCAGAAGACTATA +
Preference number: 2 (lower is better)
Translates to: REGERVFCLSAPHGA*YSAGAHTFWFQKTI
Trigger: TATAGTCTTCTGAAACCAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTATTTGGTCTCACCTCCTaGGCTCTAGGGGTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLFGLTS*ALGVLP
Trigger: TGGAAGAACCCCTAGAGCCCAGGAGGTGAGACCAAA...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAGGCTGGAGTGTGCAGTaGCATGATCATAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLGWSVQ*HDHSSL
Trigger: CAGTGAGCTATGATCATGCCACTGCACACTCCAGCC...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGAACTCCTGACCTCGTaGTCTGCCCACTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYELLTS*SAHFSL
Trigger: GAGGCTGAAGTGGGCAGATCACGAGGTCAGGAGTTC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp AAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGCCCAAATTTTCTCATaGCAAAGCCTAAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: KVRECSAYLPHMVPCTRQAQIFS*QSLSSF
Trigger: GAAGGAGCTTAGGCTTTGGCATGAGAAAATTTGGGC...CTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGATCTGCCCCACATGGTaGCTTGTACTCGGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: SREDNAERDNHHTRQDERICPTW*LVLGRC
Trigger: GCACCTGCCGAGTACAAGGCACCATGTGGGGCAGAT...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAATCTGCTGCTTGGTTTaGGCAAACAGCCATCTGCAC +
Preference number: 2 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLICCLV*ANSHLH
Trigger: GTGCAGATGGCTGTTTGCCCAAACCAAGCAGCAGAT...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGGCCTGTGCCCCTCAGTaGAATATCTTCTGTCCCAAA +
Preference number: 2 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMACAPQ*NIFCPK
Trigger: TTTGGGACAGAAGATATTTCACTGAGGGGCACAGGC...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTCACACATCCATATGGTaGAGCAGGGCAGGGATTCAA +
Preference number: 2 (lower is better)
Translates to: FLERVHAGMILDCATNGPHTSIW*SRAGIQ
Trigger: TTGAATCCCTGCCCTGCTTCACCATATGGATGTGTG...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTATGGGATGGCACAGAATaGTGTTGGAGCATAATGCAG +
Preference number: 2 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLWDGTE*CWSIMQ
Trigger: CTGCATTATGCTCCAACAGCATTCTGTGCCATCCCA...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAAAGAAGGCAGAAGCCTaGGAGTCACACAGAAACACA +
Preference number: 2 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLKKAEA*ESHRNT
Trigger: TGTGTTTCTGTGTGACTCCCAGGCTTCTGCCTTCTT...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGGGGCTGCTGGCACACTaGCTTCATCTGCCTTGGTTT +
Preference number: 2 (lower is better)
Translates to: SREDNAERDNHHTRQDERGLLAH*LHLPWF
Trigger: AAACCAAGGCAGATGAAGCCAGTGTGCCAGCAGCCC...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATAGTCCCAAAGGGCTGCTaGCACACTGGCTTCATCTGC +
Preference number: 2 (lower is better)
Translates to: SHCTRPRRVHFITAITTIVPKGC*HTGFIC
Trigger: GCAGATGAAGCCAGTGTGCCAGCAGCCCTTTGGGAC...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGATCTGCTGCTTGGTTTaGGCAAACAGCCATCTGCAC +
Preference number: 2 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMICCLV*ANSHLH
Trigger: GTGCAGATGGCTGTTTGCCCAAACCAAGCAGCAGAT...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTAGAGTTGACAGTGGCTaGGGTAGTAAAGGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: FLERVHAGMILDCATNGPRVDSG*GSKGKV
Trigger: CACCTTCCCTTTACTACCCCAGCCACTGTCAACTCT...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGTTCAAGACCACAGTCTaGGTCACTGCTGCCGGGTCA +
Preference number: 2 (lower is better)
Translates to: SREDNAERDNHHTRQDERFKTTV*VTAAGS
Trigger: TGACCCGGCAGCAGTGACCCAGACTGTGGTCTTGAA...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CAA 90 bp CAGTGTCTACAGCAGAGAACTTCGGAAACCTTTCTAAACCTGGGCTaGCTGCTGCGTAAAATGCAGTGGATAATCCCTACTTCATACGGC +
Preference number: 2 (lower is better)
Translates to: QCLQQRTSETFLNLG*LLRKMQWIIPTSYG
Trigger: GCCGTATGAAGTAGGGATTATCCACTGCATTTTACGCAGCAGCAAGCCCAGGTTTAGAAAGGTTTCCGAAGTTCTCTGCTGTAGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTTGTGTGTCTGAGGGATaGGCTACATTTCCCAAGATC +
Preference number: 2 (lower is better)
Translates to: FLERVHAGMILDCATNGPCVSEG*ATFPKI
Trigger: GATCTTGGGAAATGTAGCTCATCCCTCAGACACACA...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATGGAAGGCTCCCAAGATaGGGGACGTCTAAGCGGGGT +
Preference number: 2 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYGRLPR*GTSKRG
Trigger: ACCCCGCTTAGACGTCCCTCATCTTGGGAGCCTTCC...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGGCCTGTGCCCCTCAGTaGAATATCTTCTGTCCCAAA +
Preference number: 2 (lower is better)
Translates to: SREDNAERDNHHTRQDERACAPQ*NIFCPK
Trigger: TTTGGGACAGAAGATATTTCACTGAGGGGCACAGGC...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGCACTGCCTTGTGCCTTaGAGCTCAAATGATAAAACC +
Preference number: 2 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMHCLVP*SSNDKT
Trigger: GGTTTTATCATTTGAGCTTCAAGGCACAAGGCAGTG...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAATCTACTATGGTAACTaGTGCCATAATGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLIYYGN*CHNGMA
Trigger: TGCCATCCCATTATGGCAGCAGTTACCATAGTAGAT...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGGCACAGAATGCTGTTaGAGCATAATGCAGTGGAGC +
Preference number: 2 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYGTECC*SIMQWS
Trigger: GCTCCACTGCATTATGCTCCAACAGCATTCTGTGCC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTACAGCATTTAATGTGTTaGTACATCTGTCTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLQHLMC*YICLPS
Trigger: AGAGGGAAGACAGATGTATCAACACATTAAATGCTG...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCAATGGTCTTGGCTCACTaGAACCTCCGCCACCTGGGT +
Preference number: 2 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSMVLAH*NLRHLG
Trigger: ACCCAGGTGGCGGAGGTTGCAGTGAGCCAAGACCAT...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGGCAAACCAACCCCTGTaGCTGTGCCCCTCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: YHYPSIVYYILYDWQATQANQPL*LCPSVK
Trigger: TTTCACTGAGGGGCACAGGCACAGGGGTTGGTTTGC...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCGCCCTTCAGCCCAGCTaGTGGTCCTTTGGCAAACCA +
Preference number: 2 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCALQPS*WSFGKP
Trigger: TGGTTTGCCAAAGGACCAGCAGCTGGGCTGAAGGGC...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGGGCAAACAGCCATCTaGACCATTTCTTTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYGQTAI*TISFLL
Trigger: CAAGAGGAAAGAAATGGTGCAGATGGCTGTTTGCCC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCATCTGCCCCACATGGTaGCTTGTACTCGGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCICPTW*LVLGRC
Trigger: GCACCTGCCGAGTACAAGGCACCATGTGGGGCAGAT...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACAGTGTTCTGCTTATCTaGCCCACATGGTGCCTTGTA +
Preference number: 2 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYSVLLI*PTWCLV
Trigger: TACAAGGCACCATGTGGGGCAGATAAGCAGAACACT...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTATCTACTATGGTAACTaGTGCCATAATGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: FLERVHAGMILDCATNGPIYYGN*CHNGMA
Trigger: TGCCATCCCATTATGGCAGCAGTTACCATAGTAGAT...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGCTCATGAACTGGGAGTaGCTAAATGTGTCCCTAGTT +
Preference number: 2 (lower is better)
Translates to: SREDNAERDNHHTRQDERLMNWE*LNVSLV
Trigger: AACTAGGGACACATTTAGTCACTCCCAGTTCATGAG...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGCACTGCCTTGTGCCTTaGAGCTCAAATGATAAAACC +
Preference number: 2 (lower is better)
Translates to: SREDNAERDNHHTRQDERHCLVP*SSNDKT
Trigger: GGTTTTATCATTTGAGCTTCAAGGCACAAGGCAGTG...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTGTGGCAATTACAAAGTaGAAAGTACTGTGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: FLERVHAGMILDCATNGPVAITK*KVLCQE
Trigger: TTCTTGGCACAGTACTTTTCACTTTGTAATTGCCAC...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATACCAACTCTCTACTCCTaGTTTTCACTCAGCCTAGGA +
Preference number: 2 (lower is better)
Translates to: SHCTRPRRVHFITAITTIPTLYS*FSLSLG
Trigger: TCCTAGGCTGAGTGAAAAGCAGGAGTAGAGAGTTGG...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTAGCAGTGAGCTATGACTaGGCCACTGCATTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLAVSYD*ATAFQP
Trigger: AGGCTGGAATGCAGTGGCGCAGTCATAGCTCACTGC...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGCAAGATCTGCTTATCTaGTGCTTGGTTTGGGCAAAC +
Preference number: 2 (lower is better)
Translates to: SREDNAERDNHHTRQDERQDLLI*CLVWAN
Trigger: GTTTGCCCAAACCAAGCAGCAGATAAGCAGATCTTG...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATCACAGTCTGGGTCACTaGTGCCGGGTCAGTCTTTAT +
Preference number: 2 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYHSLGH*CRVSLY
Trigger: ATAAAGACTGACCCGGCAGCAGTGACCCAGACTGTG...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATATGATCATAGCTCACTaGACCCTCCAACTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYMIIAH*TLQLPG
Trigger: GCCTGGGAGTTGGAGGGTGCAGTGAGCTATGATCAT...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTACTTCAGCCCAGCTGCTaGTCCTTTGGCAAACCAACC +
Preference number: 2 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLLQPSC*SFGKPT
Trigger: GGTTGGTTTGCCAAAGGACCAGCAGCTGGGCTGAAG...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAACTTATCTGCCCCACATaGTGCCTTGTACTCGGCAGG +
Preference number: 2 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKLICPT*CLVLGR
Trigger: CCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAG...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CAA 90 bp AATGTGTTGATACATCTGTCTTCCCTCTACCAGATGGTGACTCCCTaGAGAACAGGGACTGTGTCTTATCTACTGTTAATTACCCAGTGT +
Preference number: 2 (lower is better)
Translates to: NVLIHLSSLYQMVTP*RTGTVSYLLLITQC
Trigger: ACACTGGGTAATTAACAGTAGATAAGACACAGTCCCTGTTCTCAAGGGAGTCACCATCTGGTAGAGGGAAGACAGATGTATCAACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CAA 90 bp TCCCAAGCCAGGAGTAATGGTGCTTTAAACAAGAAGAGCCTCAATTaGAAAATGGGGGAAATTGTACCTCATTCACAGGGCTTTAGTGAG +
Preference number: 2 (lower is better)
Translates to: SQARSNGALNKKSLN*KMGEIVPHSQGFSE
Trigger: CTCACTAAAGCCCTGTGAATGAGGTACAATTTCCCCCATTTTCAAATTGAGGCTCTTCTTGTTTAAAGCACCATTACTCCTGGCTTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGCTTTCCTCTTGGCTGTaGCAGGTGAACTGTTCTAGC +
Preference number: 2 (lower is better)
Translates to: YHYPSIVYYILYDWQATQLSSWL*QVNCSS
Trigger: GCTAGAACAGTTCACCTGTCACAGCCAAGAGGAAAG...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAATTGCCCAGGCTGGAGTaGAATAGCATGGTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKLPRLE*NSMVLA
Trigger: AGCCAAGACCATGCTATTGCACTCCAGCCTGGGCAA...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGCACACTGGCTTCATCTaGCTTGGTTTTTCTCAGATT +
Preference number: 2 (lower is better)
Translates to: SREDNAERDNHHTRQDERHTGFI*LGFSQI
Trigger: AATCTGAGAAAAACCAAGGCAGATGAAGCCAGTGTG...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCGAGGTTACAGGCACCTaGCATTGTGCCCGGCTAATT +
Preference number: 2 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCEVTGT*HCARLI
Trigger: AATTAGCCGGGCACAATGGCAGGTGCCTGTAACCTC...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGGTGCTCACACGTTCTaGTTTCAGAAGACTATACTT +
Preference number: 2 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYGAHTF*FQKTIL
Trigger: AAGTATAGTCTTCTGAAACCAGAACGTGTGAGCACC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTAGAAATAGGAAAGTGTaGTTCCTAGAGAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: FLERVHAGMILDCATNGPRNRKV*FLEKLQ
Trigger: TTGCAGTTTCTCTAGGAACCACACTTTCCTATTTCT...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACCAGCATTTAATGTGTTaGTACATCTGTCTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYQHLMC*YICLPS
Trigger: AGAGGGAAGACAGATGTATCAACACATTAAATGCTG...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCCACACATCCATATGGTaGAGCAGGGCAGGGATTCAA +
Preference number: 2 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCHTSIW*SRAGIQ
Trigger: TTGAATCCCTGCCCTGCTTCACCATATGGATGTGTG...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGCTCACACAGACACCATaGGGCACAACAATTATCACC +
Preference number: 2 (lower is better)
Translates to: YHYPSIVYYILYDWQATQLTQTP*GTTIIT
Trigger: GGTGATAATTGTTGTGCCTCATGGTGTCTGTGTGAG...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATGGGCAAACAGCCATCTaGACCATTTCTTTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYGQTAI*TISFLL
Trigger: CAAGAGGAAAGAAATGGTGCAGATGGCTGTTTGCCC...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCACTTGTACTCGGCAGGTaGTCACACGTTCTGGTTTCA +
Preference number: 2 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSLVLGR*SHVLVS
Trigger: TGAAACCAGAACGTGTGAGCACCTGCCGAGTACAAG...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCAGGTGAGAGAGTGTTCTaGTTATCTGCCCCACATGGT +
Preference number: 2 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSGERVF*LSAPHG
Trigger: ACCATGTGGGGCAGATAAGCAGAACACTCTCTCACC...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTGGGATGGCACAGAATaGTGTTGGAGCATAATGCAG +
Preference number: 2 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYWDGTE*CWSIMQ
Trigger: CTGCATTATGCTCCAACAGCATTCTGTGCCATCCCA...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCATCTGGAAAGGGTCCATaGAGGGATGATCTTGGACTG +
Preference number: 2 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSSGKGP*RDDLGL
Trigger: CAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGA...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGAGGCGTATGCCACCTTaGTCTGCTAATTTTTACTTT +
Preference number: 2 (lower is better)
Translates to: SREDNAERDNHHTRQDERRRMPP*SANFYF
Trigger: AAAGTAAAAATTAGCAGAGCAAGGTGGCATACGCCT...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCAGGCACAGAATGCTGTTaGAGCATAATGCAGTGGAGC +
Preference number: 2 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSGTECC*SIMQWS
Trigger: GCTCCACTGCATTATGCTCCAACAGCATTCTGTGCC...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAATTCTGTCACCTAGGCTaGAGTGTGCAGTGGCATGAT +
Preference number: 2 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKFCHLG*SVQWHD
Trigger: ATCATGCCACTGCACACTCCAGCCTAGGTGACAGAA...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CAA 90 bp TGCTCCCAAGTCTTTCTGACAGGATCCTTGTCTTTGATAGCTTCCTaGGTGTTAAGTGTGATAAGATGTTTCAGGTCTCATGATTTTCCT +
Preference number: 2 (lower is better)
Translates to: CSQVFLTGSLSLIAS*VLSVIRCFRSHDFP
Trigger: AGGAAAATCATGAGACCTGAAACATCTTATCACACTTAACACCAAGGAAGCTATCAAAGACAAGGATCCTGTCAGAAAGACTTGGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATGTAAAGATGTGTGTCTaGGGGATGAGCTACATTTCC +
Preference number: 2 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYVKMCV*GMSYIS
Trigger: GGAAATGTAGCTCATCCCTCAGACACACATCTTTAC...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATGTAGTAAAGGGAAGGTaGGAGAGTGTTCTGCTTATC +
Preference number: 2 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYVVKGR*ESVLLI
Trigger: GATAAGCAGAACACTCTCTCACCTTCCCTTTACTAC...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCAGTGTTCTGCTTATCTaGCCCACATGGTGCCTTGTA +
Preference number: 2 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCSVLLI*PTWCLV
Trigger: TACAAGGCACCATGTGGGGCAGATAAGCAGAACACT...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAATGCTTATCTGCTGCTTaGTTTGGGCAAACAGCCATC +
Preference number: 2 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKCLSAA*FGQTAI
Trigger: GATGGCTGTTTGCCCAAACCAAGCAGCAGATAAGCA...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCTGGAGCATAATGCAGTaGAGCACTTGTGCCTACCTT +
Preference number: 2 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCWSIMQ*STCAYL
Trigger: AAGGTAGGCACAAGTGCTCCACTGCATTATGCTCCA...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCCTATGTTGTCCTGTTTaGTCTCAAACTCCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCLCCPV*SQTPGL
Trigger: GAGGCCAGGAGTTTGAGACCAAACAGGACAACATAG...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CAA 90 bp ACTTTTCTCTTTTTCCTCTGTCCAATACTTACAGCATTTAATGTGTaGATACATCTGTCTTCCCTCTACCAGATGGTGACTCCCTTGAGA +
Preference number: 2 (lower is better)
Translates to: TFLFFLCPILTAFNV*IHLSSLYQMVTPLR
Trigger: TCTCAAGGGAGTCACCATCTGGTAGAGGGAAGACAGATGTATCAACACATTAAATGCTGTAAGTATTGGACAGAGGAAAAAGAGAAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCACTCATGAACTGGGAGTaGCTAAATGTGTCCCTAGTT +
Preference number: 2 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSLMNWE*LNVSLV
Trigger: AACTAGGGACACATTTAGTCACTCCCAGTTCATGAG...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCGTAGTAAAGGGAAGGTaGGAGAGTGTTCTGCTTATC +
Preference number: 2 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCVVKGR*ESVLLI
Trigger: GATAAGCAGAACACTCTCTCACCTTCCCTTTACTAC...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCGTGTGTATACACCCATaGGCCATTCACCACAATCAA +
Preference number: 2 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCVCIHP*AIHHNQ
Trigger: TTGATTGTGGTGAATGGCTCATGGGTGTATACACAC...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGATGATAGCCAGTACATaGTGCACTTACCATGTGTCA +
Preference number: 2 (lower is better)
Translates to: YHYPSIVYYILYDWQATQMIAST*CTYHVS
Trigger: TGACACATGGTAAGTGCAGCATGTACTGGCTATCAT...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CAA 90 bp TTAAATCCTGACTTTTGCTATGGTAGGAATGAACTTTACTATTCCTaGTCTCATGAACTGGGAGTGACTAAATGTGTCCCTAGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: LNPDFCYGRNELYYS*SHELGVTKCVPSCS
Trigger: ACTGCAACTAGGGACACATTTAGTCACTCCCAGTTCATGAGACAAGGAATAGTAAAGTTCATTCCTACCATAGCAAAAGTCAGGATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATACATTTCCCAAGATCTaGTTATCTGCTGCTTGGTTT +
Preference number: 2 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYTFPKI*LSAAWF
Trigger: AAACCAAGCAGCAGATAAGCAGATCTTGGGAAATGT...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGAAAAATGAAGTCATTTaGCCTGGAGTTTTCCATGGC +
Preference number: 2 (lower is better)
Translates to: YHYPSIVYYILYDWQATQKNEVI*PGVFHG
Trigger: GCCATGGAAAACTCCAGGGCAAATGACTTCATTTTT...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAGGTGCTCACACGTTCTaGTTTCAGAAGACTATACTT +
Preference number: 2 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKGAHTF*FQKTIL
Trigger: AAGTATAGTCTTCTGAAACCAGAACGTGTGAGCACC...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CAA 90 bp TATTCCCATCACCCATCTTCAACAATTTTCAACACATGGTCAATCTaGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATT +
Preference number: 2 (lower is better)
Translates to: YSHHPSSTIFNTWSI*FHLYLHPLSLSHII
Trigger: AATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCATGTGTTGAAAATTGTTGAAGATGGGTGATGGGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR TCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCAGTGGCAATTACAAAGTaGAAAGTACTGTGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSVAITK*KVLCQE
Trigger: TTCTTGGCACAGTACTTTTCACTTTGTAATTGCCAC...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTACTGCGTAAAATGCAGTaGATAATCCCTACTTCATAC +
Preference number: 2 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLLRKMQ*IIPTSY
Trigger: GTATGAAGTAGGGATTATCCACTGCATTTTACGCAG...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTATTTCCTGTTATGGTaGTTGGATCTAGAGTTCAGA +
Preference number: 2 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYYFLLW*LDLEFR
Trigger: TCTGAACTCTAGATCCAACCACCATAACAGGAAATA...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR GCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGCAGACAACATGTGCATaGTTTACCTATAAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: YHYPSIVYYILYDWQATQQTTCA*FTYKVS
Trigger: AGAAACTTTATAGGTAAAGCATGCACATGTTGTCTG...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATGTAATACAGTTCATATaGGAATGGCATGATAAATGC +
Preference number: 2 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYVIQFI*EWHDKC
Trigger: GCATTTATCATGCCATTCCCATATGAACTGTATTAC...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAACAGTTCATATGGGAATaGCATGATAAATGCTTATTC +
Preference number: 2 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKQFIWE*HDKCLF
Trigger: GAATAAGCATTTATCATGCCATTCCCATATGAACTG...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 72 bp CTCTCTCTGGGGTTGCGGGGATGGTGGCCCTTAGCTTaGGGCTGGATCAGTGAGGATTTGTCAATCGGGCAG +
Preference number: 3 (lower is better)
Translates to: LSLGLRGWWPLA*GWISEDLSIGQ
Trigger: CTGCCCGATTGACAAATCCTCACTGATCCAGCCCCAAGCTAAGGGCCACCATCCCCGCAACCCCAGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 72 bp CTTTGGCAAACCAACCCCTGTGCCTGTGCCCCTCAGTaGAATATCTTCTGTCCCAAAGGGCTGCTGGCACAC +
Preference number: 3 (lower is better)
Translates to: LWQTNPCACAPQ*NIFCPKGLLAH
Trigger: GTGTGCCAGCAGCCCTTTGGGACAGAAGATATTTCACTGAGGGGCACAGGCACAGGGGTTGGTTTGCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGCTGCTTATCTGCTGCTaGGTTTGGGCAAACAGCCAT +
Preference number: 3 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLLLICC*VWANSH
Trigger: ATGGCTGTTTGCCCAAACCAAGCAGCAGATAAGCAG...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 72 bp TCAAATGATAAAACCTATGCCCTTCAGCCCAGCTGCTaGTCCTTTGGCAAACCAACCCCTGTGCCTGTGCCC +
Preference number: 3 (lower is better)
Translates to: SNDKTYALQPSC*SFGKPTPVPVP
Trigger: GGGCACAGGCACAGGGGTTGGTTTGCCAAAGGACCAGCAGCTGGGCTGAAGGGCATAGGTTTTATCATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 72 bp AGGTCTCACTATGTTACCCGGTTTGGTCTCACCTCCTaGGCTCTAGGGGTTCTTCCACCTTGGCCTCCTAAA +
Preference number: 3 (lower is better)
Translates to: RSHYVTRFGLTS*ALGVLPPWPPK
Trigger: TTTAGGAGGCCAAGGTGGAAGAACCCCTAGAGCCCAGGAGGTGAGACCAAACCGGGTAACATAGTGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 72 bp GAAGAGTTGACAGTGGCTGGGGTAGTAAAGGGAAGGTaGGAGAGTGTTCTGCTTATCTGCCCCACATGGTGC +
Preference number: 3 (lower is better)
Translates to: EELTVAGVVKGR*ESVLLICPTWC
Trigger: GCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTTCCCTTTACTACCCCAGCCACTGTCAACTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 72 bp AGCTCAAATGATAAAACCTATGCCCTTCAGCCCAGCTaGTGGTCCTTTGGCAAACCAACCCCTGTGCCTGTG +
Preference number: 3 (lower is better)
Translates to: SSNDKTYALQPS*WSFGKPTPVPV
Trigger: CACAGGCACAGGGGTTGGTTTGCCAAAGGACCAGCAGCTGGGCTGAAGGGCATAGGTTTTATCATTTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAAATGCAGTGGAGCACTaGTGCCTACCTTGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLNAVEH*CLPCSW
Trigger: CCAGGAGCAAGGTAGGCACAAGTGCTCCACTGCATT...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTATGCAGTGGCATGATCTaGGCTCACTGTAACCTCCGC +
Preference number: 3 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLCSGMI*AHCNLR
Trigger: GCGGAGGTTACAGTGAGCCAAGATCATGCCACTGCA...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTACGGGATTTTGCCTTGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLRDFAL*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACAAGGCAAAATCCCG...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGAGGCTCTCTCTGGGGTaGCGGGGATGGTGGCCCTTA +
Preference number: 3 (lower is better)
Translates to: SREDNAERDNHHTRQDERRLSLG*RGWWPL
Trigger: TAAGGGCCACCATCCCCGCAACCCCAGAGAGAGCCT...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTACAGATGGTGACTCCCTaGAGAACAGGGACTGTGTCT +
Preference number: 3 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLQMVTP*RTGTVS
Trigger: AGACACAGTCCCTGTTCTCAAGGGAGTCACCATCTG...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp AAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGAAAAGACAAGATGTTaGCCAGGCAGAAAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: KVRECSAYLPHMVPCTRQEKTRC*PGRKRA
Trigger: TGCCCTCTTTCTGCCTGGCAAACATCTTGTCTTTTC...CTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 72 bp TCTGTCCCAAAGGGCTGCTGGCACACTGGCTTCATCTaGCTTGGTTTTTCTCAGATTCCACGCAGCTTTCTA +
Preference number: 3 (lower is better)
Translates to: SVPKGCWHTGFI*LGFSQIPRSFL
Trigger: TAGAAAGCTGCGTGGAATCTGAGAAAAACCAAGGCAGATGAAGCCAGTGTGCCAGCAGCCCTTTGGGACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 72 bp GTGCCCCTCAGTGAAATATCTTCTGTCCCAAAGGGCTaGTGGCACACTGGCTTCATCTGCCTTGGTTTTTCT +
Preference number: 3 (lower is better)
Translates to: VPLSEISSVPKG*WHTGFICLGFS
Trigger: AGAAAAACCAAGGCAGATGAAGCCAGTGTGCCAGCAGCCCTTTGGGACAGAAGATATTTCACTGAGGGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 72 bp CATCTGCACCATTTCTTTCCTCTTGGCTGTGACAGGTaGACTGTTCTAGCACAGACCAGGTCACTGCCTTGT +
Preference number: 3 (lower is better)
Translates to: HLHHFFPLGCDR*TVLAQTRSLPC
Trigger: ACAAGGCAGTGACCTGGTCTGTGCTAGAACAGTTCACCTGTCACAGCCAAGAGGAAAGAAATGGTGCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 72 bp CCTCACAACAACCCTCCTAGGCAGGCATTCCCTTTCTaGAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATG +
Preference number: 3 (lower is better)
Translates to: PHNNPPRQAFPF*SQESTFRKVKM
Trigger: CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCTAGGAGGGTTGTTGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 72 bp GGGATGAGCTACATTTCCCAAGATCTGCTTATCTGCTaGTTGGTTTGGGCAAACAGCCATCTGCACCATTTC +
Preference number: 3 (lower is better)
Translates to: GMSYISQDLLIC*LVWANSHLHHF
Trigger: GAAATGGTGCAGATGGCTGTTTGCCCAAACCAAGCAGCAGATAAGCAGATCTTGGGAAATGTAGCTCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 72 bp CTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTaGTCACACGTTCTGGTTTCAGAAGACTATACTTTT +
Preference number: 3 (lower is better)
Translates to: LICPTWCLVLGR*SHVLVSEDYTF
Trigger: AAAAGTATAGTCTTCTGAAACCAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 72 bp AACTCTGAGTCCTCAGTCATTTCTGGAAAGGGTCCATaGAGGGATGATCTTGGACTGTGCAACAAATGGTCC +
Preference number: 3 (lower is better)
Translates to: NSESSVISGKGP*RDDLGLCNKWS
Trigger: GGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAATGACTGAGGACTCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 72 bp GCACAACAATTATCACCCCTATTTACACGATGGAACTaGGGCACCAGGAGGTTAAGTAACTTGCCTGAGGCT +
Preference number: 3 (lower is better)
Translates to: AQQLSPLFTRWN*GTRRLSNLPEA
Trigger: AGCCTCAGGCAAGTTACTTAACCTCCTGGTGCCCCAGTTCCATCGTGTAAATAGGGGTGATAATTGTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTGAAAAGACAAGATGTTaGCCAGGCAGAAAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: FLERVHAGMILDCATNGPEKTRC*PGRKRA
Trigger: TGCCCTCTTTCTGCCTGGCAAACATCTTGTCTTTTC...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTATTTCTGACAGGATCCTaGTCTTTGATAGCTTCCTTG +
Preference number: 3 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLFLTGS*SLIASL
Trigger: CAAGGAAGCTATCAAAGACAAGGATCCTGTCAGAAA...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 72 bp GGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAACTaGCATGCTAAACCACTATATGGCAGGCTTGTATAT +
Preference number: 3 (lower is better)
Translates to: GSQSGSSDHALN*HAKPLYGRLVY
Trigger: ATATACAAGCCTGCCATATAGTGGTTTAGCATGTCAGTTAAGAGCATGGTCACTGGAGCCAGACTGTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 72 bp AAGCAGGGCAGGGATTCAAAGGCCCAAATTTTCTCATaGCAAAGCCTAAGCTCCTTCTCTCTTACCTTTCCT +
Preference number: 3 (lower is better)
Translates to: KQGRDSKAQIFS*QSLSSFSLTFP
Trigger: AGGAAAGGTAAGAGAGAAGGAGCTTAGGCTTTGGCATGAGAAAATTTGGGCCTTTGAATCCCTGCCCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 72 bp GGTAGACAGGCAATTCCAATCTACTATGGTAACTGCTaGCATAATGGGATGGCACAGAATGCTGTTGGAGCA +
Preference number: 3 (lower is better)
Translates to: GRQAIPIYYGNC*HNGMAQNAVGA
Trigger: TGCTCCAACAGCATTCTGTGCCATCCCATTATGGCAGCAGTTACCATAGTAGATTGGAATTGCCTGTCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGCTGGCTTCATCTGCCTaGGTTTTTCTCAGATTCCAC +
Preference number: 3 (lower is better)
Translates to: SREDNAERDNHHTRQDERLASSA*VFLRFH
Trigger: GTGGAATCTGAGAAAAACCAAGGCAGATGAAGCCAG...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCTGGAGTTTCGCCACGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCWSFAT*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACGTGGCGAAACTCCA...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 72 bp CACAGATTCATGCATCCACTCCTCACACAGACACCATaGGGCACAACAATTATCACCCCTATTTACACGATG +
Preference number: 3 (lower is better)
Translates to: HRFMHPLLTQTP*GTTIITPIYTM
Trigger: CATCGTGTAAATAGGGGTGATAATTGTTGTGCCTCATGGTGTCTGTGTGAGGAGTGGATGCATGAATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 72 bp TTCCAATCTACTATGGTAACTGCTGCCATAATGGGATaGCACAGAATGCTGTTGGAGCATAATGCAGTGGAG +
Preference number: 3 (lower is better)
Translates to: FQSTMVTAAIMG*HRMLLEHNAVE
Trigger: CTCCACTGCATTATGCTCCAACAGCATTCTGTGCCATCCCATTATGGCAGCAGTTACCATAGTAGATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAATGCAATAGCATGGTCTaGGCTCACTGCAACCTCCGC +
Preference number: 3 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKCNSMV*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGACCATGCTATTGCA...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCTGCAATAGCATGGTCTaGGCTCACTGCAACCTCCGC +
Preference number: 3 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCCNSMV*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGACCATGCTATTGCA...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 72 bp TTTCTAAACCTGGGCTTGCTGCTGCGTAAAATGCAGTaGATAATCCCTACTTCATACGGCTGGTATGAAAGT +
Preference number: 3 (lower is better)
Translates to: FLNLGLLLRKMQ*IIPTSYGWYES
Trigger: ACTTTCATACCAGCCGTATGAAGTAGGGATTATCCACTGCATTTTACGCAGCAGCAAGCCCAGGTTTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACCAGGAATTAGTGATGTaGGCAGTTAACAAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYQELVM*AVNKEE
Trigger: CTCCTCTTTGTTAACTGCCAACATCACTAATTCCTG...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 72 bp AAAGGGCAGAGACAGGTTTCTTCATATTTAACATCCTaGGAGGCTACAACTCTGAGTCCTCAGTCATTTCTG +
Preference number: 3 (lower is better)
Translates to: KGQRQVSSYLTS*EATTLSPQSFL
Trigger: CAGAAATGACTGAGGACTCAGAGTTGTAGCCTCTCAGGATGTTAAATATGAAGAAACCTGTCTCTGCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR GCA 72 bp ATAAATGTAGTGACCCAAGCACCAACTCTCTACTCCTaGTTTTCACTCAGCCTAGGAAAAACTACAACGGAA +
Preference number: 3 (lower is better)
Translates to: INVVTQAPTLYS*FSLSLGKTTTE
Trigger: TTCCGTTGTAGTTTTTCCTAGGCTGAGTGAAAAGCAGGAGTAGAGAGTTGGTGCTTGGGTCACTACATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATCAGAAAGAGGGCATATaGGAAATAGGCTGGCAATCC +
Preference number: 3 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYQKEGI*EIGWQS
Trigger: GGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTG...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGACCATTTCTTTCCTCTaGGCTGTGACAGGTGAACTG +
Preference number: 3 (lower is better)
Translates to: YHYPSIVYYILYDWQATQTISFL*AVTGEL
Trigger: CAGTTCACCTGTCACAGCCAAGAGGAAAGAAATGGT...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTATATCTGCTGCTTGGTTaGGGCAAACAGCCATCTGCA +
Preference number: 3 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLYLLLG*GKQPSA
Trigger: TGCAGATGGCTGTTTGCCCAAACCAAGCAGCAGATA...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAACTGCTTATCTGCTGCTaGGTTTGGGCAAACAGCCAT +
Preference number: 3 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKLLICC*VWANSH
Trigger: ATGGCTGTTTGCCCAAACCAAGCAGCAGATAAGCAG...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGACTATGTTGTCCTGTTaGGTCTCAAACTCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: YHYPSIVYYILYDWQATQTMLSC*VSNSWP
Trigger: AGGCCAGGAGTTTGAGACCAAACAGGACAACATAGT...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 72 bp AGAGTTCTACTCAGGATTCAAGTAAAGATGTGTGTCTaGGGGATGAGCTACATTTCCCAAGATCTGCTTATC +
Preference number: 3 (lower is better)
Translates to: RVLLRIQVKMCV*GMSYISQDLLI
Trigger: GATAAGCAGATCTTGGGAAATGTAGCTCATCCCTCAGACACACATCTTTACTTGAATCCTGAGTAGAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 72 bp CTTGGTGTTAAGTGTGATAAGATGTTTCAGGTCTCATaGTTTTCCTGCCCTAGACCTGGAACTGATCATTTC +
Preference number: 3 (lower is better)
Translates to: LGVKCDKMFQVS*FSCPRPGTDHF
Trigger: GAAATGATCAGTTCCAGGTCTAGGGCAGGAAAATCATGAGACCTGAAACATCTTATCACACTTAACACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAACTGGCTTCATCTGCCTaGGTTTTTCTCAGATTCCAC +
Preference number: 3 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKLASSA*VFLRFH
Trigger: GTGGAATCTGAGAAAAACCAAGGCAGATGAAGCCAG...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCAACCATTTCTTTCCTCTaGGCTGTGACAGGTGAACTG +
Preference number: 3 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSTISFL*AVTGEL
Trigger: CAGTTCACCTGTCACAGCCAAGAGGAAAGAAATGGT...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCAACTGCAAATGAAGAGTaGACAGTGGCTGGGGTAGTA +
Preference number: 3 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSTANEE*TVAGVV
Trigger: TACTACCCCAGCCACTGTCAACTCTTCATTTGCAGT...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAACAAGGTCTCACTATGTaGTCCTGTTTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKQGLTM*SCLVSN
Trigger: GTTTGAGACCAAACAGGACAACATAGTGAGACCTTG...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 72 bp AATTATTTAACCTCTCTGTGCCTGAGTTTCGGTATCTaGAAACCAAGAATAATATCGGCGCTGAGTTGTGAG +
Preference number: 3 (lower is better)
Translates to: NYLTSLCLSFGI*KPRIISALSCE
Trigger: CTCACAACTCAGCGCCGATATTATTCTTGGTTTTCAGATACCGAAACTCAGGCACAGAGAGGTTAAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAGAACTTTACTATTCCTaGTCTCATGAACTGGGAGTG +
Preference number: 3 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKELYYS*SHELGV
Trigger: CACTCCCAGTTCATGAGACAAGGAATAGTAAAGTTC...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 72 bp TATTCCCATCACCCATCTTCAACAATTTTCAACACATaGTCAATCTTGTTTCACCTATACCTCCATCCACTT +
Preference number: 3 (lower is better)
Translates to: YSHHPSSTIFNT*SILFHLYLHPL
Trigger: AAGTGGATGGAGGTATAGGTGAAACAAGATTGACCATGTGTTGAAAATTGTTGAAGATGGGTGATGGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR TCA 72 bp ACTTCATACGGCTGGTATGAAAGTTTTACCTTTGTATaGGGTCATATTTGTAACATACTTACCAGCATGCAC +
Preference number: 3 (lower is better)
Translates to: TSYGWYESFTFV*GHICNILTSMH
Trigger: GTGCATGCTGGTAAGTATGTTACAAATATGACCTCATACAAAGGTAAAACTTTCATACCAGCCGTATGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 72 bp CATTACCCCAGTATTGTGTACTATATTTTATATGACTaGCAGGCAACACAGTACATTTGTTCACACCAACAT +
Preference number: 3 (lower is better)
Translates to: HYPSIVYYILYD*QATQYICSHQH
Trigger: ATGTTGGTGTGAACAAATGTACTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CCA 72 bp GTGCTTCAAATATGGCAATTATTATTAATGCCCAAATaGTCCTCTCTTTTAGCTAATGGGATTGTCTCTAAG +
Preference number: 3 (lower is better)
Translates to: VLQIWQLLLMPK*SSLLANGIVSK
Trigger: CTTAGAGACAATCCCATTAGCTAAAAGAGAGGACCATTTGGGCATTAATAATAATTGCCATATTTGAAGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
CDS-3UTR TCA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGATGCCGTTTCTATGGTaGCAGCCGGGCCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: MFARQKEGILEIGWQSQWMPFLW*QPGRGP
Trigger: GGGCCCCCGGCCCGGCTGTCACCATAGAAACGGCAT...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGCTGGTCTCAAACTCCTaGCCTCAGGCGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLLVSNS*PQAIHL
Trigger: CAGGTGGATCGCCTGAGGTCAGGAGTTTGAGACCAG...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGGGGCTGCTGGCACACTaGCTTCATCTGCCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLGLLAH*LHLPWF
Trigger: AAACCAAGGCAGATGAAGCCAGTGTGCCAGCAGCCC...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGCTTATCTGCCCCACATaGTGCCTTGTACTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLLICPT*CLVLGR
Trigger: CCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAG...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAGGGTTGCGGGGATGGTaGCCCTTAGCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLGLRGW*PLAWGW
Trigger: CCAGCCCCAAGCTAAGGGCCACCATCCCCGCAACCC...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGTTGGGGCTGGATCAGTaGGGATTTGTCAATCGGGCA +
Preference number: 4 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLLGLDQ*GFVNRA
Trigger: TGCCCGATTGACAAATCCTCACTGATCCAGCCCCAA...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGGAGGTTACAGGCACCTaGCATTGTGCCCGGCTAATT +
Preference number: 4 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLEVTGT*HCARLI
Trigger: AATTAGCCGGGCACAATGGCAGGTGCCTGTAACCTC...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGTCTGGAAAGGGTCCATaGAGGGATGATCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLSGKGP*RDDLGL
Trigger: CAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGA...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGACCCCGCAAAGTTCTaGGTCGGCCCCCGACAGCCG +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYDPAKF*VGPRQP
Trigger: CGGCTGTCGGGGGCCGACCCAGAACTTTGCGGGGTC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGGCAAGGGGTGCCCTTTaGCTTGTGCTGGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMARGAL*LVLGDE
Trigger: CTCATCCCCCAGCACAAGGCAAAGGGCACCCCTTGC...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGCCCCCGACAGCCGGTaGCCCCAAACTCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYAPDSR*PQTHSK
Trigger: CTTGCTGTGAGTTTGGGGGCACCGGCTGTCGGGGGC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGAGCTATCCAGCCAGATaGCTCTTGGAGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLSYPAR*LLEKKK
Trigger: CTTCTTCTTCTCCAAGAGCCATCTGGCTGGATAGCT...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAGTCCCAAAGGGCTGCTaGCACACTGGCTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLVPKGC*HTGFIC
Trigger: GCAGATGAAGCCAGTGTGCCAGCAGCCCTTTGGGAC...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp AAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGCACACATCCATATGGTaGAGCAGGGCAGGGATTCAA +
Preference number: 4 (lower is better)
Translates to: KVRECSAYLPHMVPCTRQHTSIW*SRAGIQ
Trigger: TTGAATCCCTGCCCTGCTTCACCATATGGATGTGTG...CTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGGTGTGTATACACCCATaGGCCATTCACCACAATCAA +
Preference number: 4 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLVCIHP*AIHHNQ
Trigger: TTGATTGTGGTGAATGGCTCATGGGTGTATACACAC...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGCCTGGTTCTAGGTTGTaGAGCTCCTCAGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: MFARQKEGILEIGWQSQWPGSRL*SSSGLG
Trigger: TCCAAGCCCTGAGGAGCTCCACAACCTAGAACCAGG...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAGGGATTGGCGCAGGCTaGCGCTGGGAACCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKGIGAG*RWEPPR
Trigger: GCGCGGGGGTTCCCAGCGCCAGCCTGCGCCAATCCC...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACAAGCAGAGGCTCTCTCTaGGGTTGCGGGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTSRGSL*GCGDGG
Trigger: GCCACCATCCCCGCAACCCCAGAGAGAGCCTCTGCT...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTTGTCAGTGGAGAGGGTaGATGCAGGTCCTGGTCCTA +
Preference number: 4 (lower is better)
Translates to: FLERVHAGMILDCATNGPCQWRG*MQVLVL
Trigger: TAGGACCAGGACCTGCATTCACCCTCTCCACTGACA...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp AAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGCTCACACAGACACCATaGGGCACAACAATTATCACC +
Preference number: 4 (lower is better)
Translates to: KVRECSAYLPHMVPCTRQLTQTP*GTTIIT
Trigger: GGTGATAATTGTTGTGCCTCATGGTGTCTGTGTGAG...CTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAGTGCCCTTTGCCTTGTaGTGGGGGATGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKVPFAL*WGMRRG
Trigger: TCCCCTCCTCATCCCCCAGCACAAGGCAAAGGGCAC...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACAGCAAGGGGTGCCCTTTaGCTTGTGCTGGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTARGAL*LVLGDE
Trigger: CTCATCCCCCAGCACAAGGCAAAGGGCACCCCTTGC...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGACATTAATTCTTCTCTaGGGAATCGCTCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLTLILL*GIALGL
Trigger: TAGACCCAGAGCGATTCCGCAGAGAAGAATTAATGT...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAATGATCATAGCTCACTaGACCCTCCAACTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLMIIAH*TLQLPG
Trigger: GCCTGGGAGTTGGAGGGTGCAGTGAGCTATGATCAT...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTGATGAGGAGGGGAGTTaGGGAGAGGCCCATTTTGCT +
Preference number: 4 (lower is better)
Translates to: FLERVHAGMILDCATNGPDEEGS*GEAHFA
Trigger: AGCAAAATGGGCCTCTCCCCAACTCCCCTCCTCATC...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACCAATTGCCAGGCTGTTaGCCGACGGCTCGGTACGCA +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYQLPGC*PTARYA
Trigger: TGCGTACCGAGCCGTCGGCCAACAGCCTGGCAATTG...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATGGCGCAGGCTGGCGCTaGGAACCCCCGCGCCGGTTA +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHGAGWR*EPPRRL
Trigger: TAACCGGCGCGGGGGTTCCCAGCGCCAGCCTGCGCC...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTACTATGTTACCCGGTTTaGTCTCACCTCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLLCYPV*SHLLGS
Trigger: AGAGCCCAGGAGGTGAGACCAAACCGGGTAACATAG...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGTTTACACGATGGAACTaGGGCACCAGGAGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: KVRECSAYLPHMVPCTRQFTRWN*GTRRLS
Trigger: ACTTAACCTCCTGGTGCCCCAGTTCCATCGTGTAAA...CTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTAGCATCGGCGGAATTTaGCGAACCCGGGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFSIGGI*RTRGRS
Trigger: GGACCGGCCCCGGGTTCGTCAAATTCCGCCGATGCT...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGCTTGGCTGTGACAGGTaGACTGTTCTAGCACAGACC +
Preference number: 4 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMLGCDR*TVLAQT
Trigger: GGTCTGTGCTAGAACAGTTCACCTGTCACAGCCAAG...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACACAGCCCGGACCACGTTaGCCACCATGTCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTQPGPR*PPCHRS
Trigger: ACTTCTGTGACATGGTGGGCAACGTGGTCCGGGCTG...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp AAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGACCCCAGAAGACACTaGCTTTGTATAATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: KVRECSAYLPHMVPCTRQDPRRH*LCIIRL
Trigger: CAAACGGATTATACAAAGGCAGTGTCTTCTGGGGTC...CTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATACTCCTGCCTCAGCCTTaGGAGTACCCGGGACTACAG +
Preference number: 4 (lower is better)
Translates to: SHCTRPRRVHFITAITTILLPQP*EYPGLQ
Trigger: CTGTAGTCCCGGGTACTCGCAAGGCTGAGGCAGGAG...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAGATTCACGGAGTTTCTaGGGATTGGCGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKDSRSF*GLAQAG
Trigger: GCCAGCCTGCGCCAATCCCCAGAAACTCCGTGAATC...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAGACCTTCTTGCTGTATaGGGGCTAATAGTAGCGGTG +
Preference number: 4 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLDLLAV*GLIVAV
Trigger: CACCGCTACTATTAGCCCCCATACAGCAAGAAGGTC...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGGGGATTTTGCCTTGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: MFARQKEGILEIGWQSQWGILPC*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAACAAGGCAAAATCCC...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTATTCTGTCACCTAGGCTaGAGTGTGCAGTGGCATGAT +
Preference number: 4 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLFCHLG*SVQWHD
Trigger: ATCATGCCACTGCACACTCCAGCCTAGGTGACAGAA...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
3UTR CAA 72 bp CACAGAATGCTGTTGGAGCATAATGCAGTGGAGCACTaGTGCCTACCTTGCTCCTGGTATATTAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HRMLLEHNAVEH*CLPCSWYIREG
Trigger: GCCTTCCCTAATATACCAGGAGCAAGGTAGGCACAAGTGCTCCACTGCATTATGCTCCAACAGCATTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
CDS-3UTR TCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAAGCATCGGCGGAATTTaGCGAACCCGGGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSSIGGI*RTRGRS
Trigger: GGACCGGCCCCGGGTTCGTCAAATTCCGCCGATGCT...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATAAGCCTCCTGAGTAGCTaGGGTTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: SHCTRPRRVHFITAITTISLLSS*GYRHLP
Trigger: TGGCAGGTGCCTGTAACCTCAGCTACTCAGGAGGCT...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACAGGTGGTAGAATTTCCTaGTCTGGGCTGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTGGRIS*SGLASG
Trigger: CCCAGAAGCCAGCCCAGAGCAGGAAATTCTACCACC...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATACAGTATACGTTGGGGTaGAGTCAGGGGTGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SHCTRPRRVHFITAITTIQYTLG*SQGCSW
Trigger: CCACGAGCACCCCTGACTGCACCCCAACGTATACTG...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACAGCAAACCAACCCCTGTaGCTGTGCCCCTCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTANQPL*LCPSVK
Trigger: TTTCACTGAGGGGCACAGGCACAGGGGTTGGTTTGC...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGATAGCCAGTACATGCTaGACTTACCATGTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: MFARQKEGILEIGWQSQWIASTC*TYHVSG
Trigger: GCCTGACACATGGTAAGTGCAGCATGTACTGGCTAT...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGATGAGGAGGGGAGTTaGGGAGAGGCCCATTTTGCT +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYDEEGS*GEAHFA
Trigger: AGCAAAATGGGCCTCTCCCCAACTCCCCTCCTCATC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAAGACCCCGCAAAGTTCTaGGTCGGCCCCCGACAGCCG +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQDPAKF*VGPRQP
Trigger: CGGCTGTCGGGGGCCGACCCAGAACTTTGCGGGGTC...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAGCAATAGCATGGTCTTaGCTCACTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKAIAWS*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAAGACCATGCTATTGC...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATACAGCTGCTGGTCCTTTaGCAAACCAACCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SHCTRPRRVHFITAITTIQLLVL*QTNPCA
Trigger: GGCACAGGGGTTGGTTTGCCAAAGGACCAGCAGCTG...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGGGCACAGAATGCTGTTaGAGCATAATGCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMGTECC*SIMQWS
Trigger: GCTCCACTGCATTATGCTCCAACAGCATTCTGTGCC...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGTGGTGGCCCTTAGCTTaGGGCTGGATCAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SREDNAERDNHHTRQDERWWPLA*GWISED
Trigger: ATCCTCACTGATCCAGCCCCAAGCTAAGGGCCACCA...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAAAGATCTGGCATGTCTaGGTTCGGAGCCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKKIWHV*VRSLCR
Trigger: CCTGCAAAGGCTCCGAACTCAGACATGCCAGATCTT...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGGCTGGTACAACTGATTaGGGTTGTCTTTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMAGTTD*GCLSAS
Trigger: AGAAGCGGAAAGACAACCTCAATCAGTTGTACCAGC...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTGGAAGGCTCCCAAGATaGGGGACGTCTAAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFGRLPR*GTSKRG
Trigger: ACCCCGCTTAGACGTCCCTCATCTTGGGAGCCTTCC...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCACAATGGAACCTTCGTaGGCCGCCGCGTTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCTMEPS*AAALSA
Trigger: CGCGGACAACGCGGCGGCTCACGAAGGTTCCATTGT...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGGTAAAGATGTGTGTCTaGGGGATGAGCTACATTTCC +
Preference number: 4 (lower is better)
Translates to: MFARQKEGILEIGWQSQWVKMCV*GMSYIS
Trigger: GGAAATGTAGCTCATCCCTCAGACACACATCTTTAC...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATTGCCCAGGCTGGAGTaGAATAGCATGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTLPRLE*NSMVLA
Trigger: AGCCAAGACCATGCTATTGCACTCCAGCCTGGGCAA...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTGGGCAAACAGCCATCTaGACCATTTCTTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FLERVHAGMILDCATNGPGQTAI*TISFLL
Trigger: CAAGAGGAAAGAAATGGTGCAGATGGCTGTTTGCCC...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTTGGGATGGCACAGAATaGTGTTGGAGCATAATGCAG +
Preference number: 4 (lower is better)
Translates to: FLERVHAGMILDCATNGPWDGTE*CWSIMQ
Trigger: CTGCATTATGCTCCAACAGCATTCTGTGCCATCCCA...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGGTAGAGACGGGATTTTaGCTTGTTGGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SREDNAERDNHHTRQDERVETGF*LVGQAG
Trigger: ACCAGCCTGGCCAACAAGGCAAAATCCCGTCTCTAC...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTACTTGACTTTGTCTTCTaGACTGCTGCGAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLLDFVF*TAASFL
Trigger: GAGAAAACTCGCAGCAGTCCAGAAGACAAAGTCAAG...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGACATCAGTATACGTTaGGGTGCAGTCAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYDISIR*GAVRGA
Trigger: AGCACCCCTGACTGCACCCCAACGTATACTGATGTC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTAGGAGTTTCTGGGGATTaGCGCAGGCTGGCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLGVSGD*RRLALG
Trigger: TCCCAGCGCCAGCCTGCGCCAATCCCCAGAAACTCC...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTTGCTTATCTGCTGCTTaGTTTGGGCAAACAGCCATC +
Preference number: 4 (lower is better)
Translates to: FLERVHAGMILDCATNGPCLSAA*FGQTAI
Trigger: GATGGCTGTTTGCCCAAACCAAGCAGCAGATAAGCA...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGCTATGTTGTCCTGTTTaGTCTCAAACTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMLCCPV*SQTPGL
Trigger: GAGGCCAGGAGTTTGAGACCAAACAGGACAACATAG...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGTGTTCCACTACTATTTaGTTACCTGGTAATACAGTT +
Preference number: 4 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLCSTTI*LPGNTV
Trigger: AACTGTATTACCAGGTAACCAAATAGTAGTGGAACA...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAATGTACACGGCTTTGCTaGGAAGTGATGGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKCTRLC*EVMAAF
Trigger: AAAGGCTGCCATCACTTCTCAGCAAAGCCGTGTACA...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACAGCTAGGATAGGTGCCTaGAATCCACAGGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTARIGA*NPQAHC
Trigger: ACAATGAGCCTGTGGATTTCAGGCACCTATCCTAGC...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAATTCCTCATTGACGGCTaGAGGTGGGATGAACATGTG +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKFLIDG*RWDEHV
Trigger: CACATGTTCATCCCACCTTCAGCCGTCAATGAGGAA...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATGAACTCCTGACCTCGTaGTCTGCCCACTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYELLTS*SAHFSL
Trigger: GAGGCTGAAGTGGGCAGATCACGAGGTCAGGAGTTC...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACACTTTCCTCTTGGCTGTaGCAGGTGAACTGTTCTAGC +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTLSSWL*QVNCSS
Trigger: GCTAGAACAGTTCACCTGTCACAGCCAAGAGGAAAG...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGAGAGGCTACAACTCTaGGTCCTCAGTCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYERLQL*VLSHFW
Trigger: CCAGAAATGACTGAGGACTCAGAGTTGTAGCCTCTC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAAATGTTAGTTCCCTTTaGTGCTCTACCCCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKNVSSL*CSTPLP
Trigger: GGGAAGCGGGGTAGAGCATCAAAGGGAACTAACATT...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATCCTGTGTGGAGAACTaGTTGGAGGGGCAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTSCVEN*LEGQEK
Trigger: TTTCTCTTGCCCCTCCAATCAGTTCTCCACACAGGA...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAAGCGAGACAGCCAGGTaGTCATCCACTGGTATCATA +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKSETAR*SSTGII
Trigger: TATGATACCAGTGGATGAGCACCTGGCTGTCTCGCT...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATCAGCCCGGACCACGTTaGCCACCATGTCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYQPGPR*PPCHRS
Trigger: ACTTCTGTGACATGGTGGGCAACGTGGTCCGGGCTG...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACTATCAACACATTCTTaGCGTGCTGCTGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKLSTHS*RAAADW
Trigger: CCAGTCTGCAGCAGCACGGCAAGAATGTGTTGATAG...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGCTATCAACACATTCTTaGCGTGCTGCTGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: SREDNAERDNHHTRQDERLSTHS*RAAADW
Trigger: CCAGTCTGCAGCAGCACGGCAAGAATGTGTTGATAG...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTGGGTGCAGTCAGGGGTaGTCGTGGTCTTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIGCSQG*SWSFPF
Trigger: GAAGGGAAAAGACCACGAGCACCCCTGACTGCACCC...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGGGTGAGAGAGTGTTCTaGTTATCTGCCCCACATGGT +
Preference number: 4 (lower is better)
Translates to: SREDNAERDNHHTRQDERGERVF*LSAPHG
Trigger: ACCATGTGGGGCAGATAAGCAGAACACTCTCTCACC...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTGGGACTACAGGCAGCTaGCACCACACCCGGCTAATT +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFGTTGS*HHTRLI
Trigger: AATTAGCCGGGTGTGGTGGCAGCTGCCTGTAGTCCC...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCCCTTTGCCTTGTGCTaGGGGATGAGGAGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFPFALC*GMRRGV
Trigger: AACTCCCCTCCTCATCCCCCAGCACAAGGCAAAGGG...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCACAATTGCCAGGCTGTTaGCCGACGGCTCGGTACGCA +
Preference number: 4 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSQLPGC*PTARYA
Trigger: TGCGTACCGAGCCGTCGGCCAACAGCCTGGCAATTG...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGTCGAACCAGGACTGTaGAAAGCAGCAACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYVEPGL*KAATEA
Trigger: AGCTTCTGTTGCTGCTTTCCACAGTCCTGGTTCGAC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACGTGCTGCTGCAGACTaGCATAGTTCTGGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKRAAAD*HSSGES
Trigger: ACTTTCTCCAGAACTATGCCAGTCTGCAGCAGCACG...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGCGTGCTGCTGCAGACTaGCATAGTTCTGGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SREDNAERDNHHTRQDERRAAAD*HSSGES
Trigger: ACTTTCTCCAGAACTATGCCAGTCTGCAGCAGCACG...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATGGCTGGCAATCCCAGTaGTTAGAGGAGCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYGWQSQ*LEEQEA
Trigger: TGCCTCCTGCTCCTCTAACCACTGGGATTGCCAGCC...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAATCTGCTGCTTGGTTTaGGCAAACAGCCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKICCLV*ANSHLH
Trigger: GTGCAGATGGCTGTTTGCCCAAACCAAGCAGCAGAT...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACAGTAACCTCCGCTTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTVTSAS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAAGCGGAGGTTAC...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
3UTR CAA 72 bp CAGCAGAGAACTTCGGAAACCTTTCTAAACCTGGGCTaGCTGCTGCGTAAAATGCAGTGGATAATCCCTACT +
Preference number: 4 (lower is better)
Translates to: QQRTSETFLNLG*LLRKMQWIIPT
Trigger: AGTAGGGATTATCCACTGCATTTTACGCAGCAGCAAGCCCAGGTTTAGAAAGGTTTCCGAAGTTCTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
CDS-3UTR TCA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGTCTTCCCATAAATGTTaGAGAGGTTTGAAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: MFARQKEGILEIGWQSQWSSHKC*RGLKSA
Trigger: AGCTGACTTCAAACCTCTTCAACATTTATGGGAAGA...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGAGAAGAGCCTCAATTTaGAAATGGGGGAAATTGTAC +
Preference number: 4 (lower is better)
Translates to: MFARQKEGILEIGWQSQWRRASI*KWGKLY
Trigger: GTACAATTTCCCCCATTTTCAAATTGAGGCTCTTCT...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAAGTGCCCTTTGCCTTGTaGTGGGGGATGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQVPFAL*WGMRRG
Trigger: TCCCCTCCTCATCCCCCAGCACAAGGCAAAGGGCAC...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTATACTGGTACAGCTCTaGCAGCAGATTTTTATCTGC +
Preference number: 4 (lower is better)
Translates to: FLERVHAGMILDCATNGPILVQL*QQIFIC
Trigger: GCAGATAAAAATCTGCTGGCAGAGCTGTACCAGTAT...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTGCGTTGTCCGCGAGATaGCGTTTCTATGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIALSAR*RFYGDS
Trigger: GCTGTCACCATAGAAACGGCATCTCGCGGACAACGC...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAATGGTCTTGGCTCACTaGAACCTCCGCCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSMVLAH*NLRHLG
Trigger: ACCCAGGTGGCGGAGGTTGCAGTGAGCCAAGACCAT...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTTCTGTCCCAAAGGGCTaGTGGCACACTGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFSVPKG*WHTGFI
Trigger: GATGAAGCCAGTGTGCCAGCAGCCCTTTGGGACAGA...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGATCTGCTTATCTGCTaGTTGGTTTGGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYDLLIC*LVWANS
Trigger: GCTGTTTGCCCAAACCAAGCAGCAGATAAGCAGATC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGCAGGCATTCCCTTTCTaGAGTCAAGAAAGCACGTTC +
Preference number: 4 (lower is better)
Translates to: SREDNAERDNHHTRQDERQAFPF*SQESTF
Trigger: GAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTG...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAAGCTATCCAGCCAGATaGCTCTTGGAGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKSYPAR*LLEKKK
Trigger: CTTCTTCTTCTCCAAGAGCCATCTGGCTGGATAGCT...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTTTTCCTGCTCTGGGCTaGCTTCTGGGAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFFPALG*LLGEGS
Trigger: AGAGCCTTCTCCCAGAAGCCAGCCCAGAGCAGGAAA...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTTCCTGCTCTGGGCTaGCTTCTGGGAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYFPALG*LLGEGS
Trigger: AGAGCCTTCTCCCAGAAGCCAGCCCAGAGCAGGAAA...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGATATTGGAAATAGGCTaGCAATCCCAGTGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMILEIG*QSQWLE
Trigger: CTCTAACCACTGGGATTGCCAGCCTATTTCCAATAT...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATATGCCTACCTTGCTCCTaGTATATTAGGGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SHCTRPRRVHFITAITTICLPCS*YIREGS
Trigger: GGAGCCTTCCCTAATATACCAGGAGCAAGGTAGGCA...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTTTGCTATCCCGAGGTaGTTCACGGAGTTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIFAIPR*FTEFLG
Trigger: CCCCAGAAACTCCGTGAATCACCTCGGGATAGCAAA...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTCTGGTCCTAGAGGCATaGAAAGGACCCCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYILVLEA*KGPQKT
Trigger: TGTCTTCTGGGGTCCTTTTCATGCCTCTAGGACCAG...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTCACCATTGTATTCCGTaGGACAAGCGAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIHHCIP*DKRDSQ
Trigger: CTGGCTGTCTCGCTTGTCGCACGGAATACAATGGTG...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACTTTTGGTTCACCTGGTaGATGGAGCCAATAAGGCAT +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYFWFTW*MEPIRH
Trigger: ATGCCTTATTGGCTCCATGCACCAGGTGAACCAAAA...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAAGGGTGCAGTCAGGGGTaGTCGTGGTCTTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQGCSQG*SWSFPF
Trigger: GAAGGGAAAAGACCACGAGCACCCCTGACTGCACCC...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAGTATACGTTGGGGTaGAGTCAGGGGTGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHQYTLG*SQGCSW
Trigger: CCACGAGCACCCCTGACTGCACCCCAACGTATACTG...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACTGGAGAAGTTGTCTTaGAGCTCCTTTAGATGCTTG +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKLEKLS*SSFRCL
Trigger: CAAGCATCTAAAGGAGCTGCAAGACAACTTCTCCAG...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCAGGGAGAGGCCCATTTTaGTACTCTGAGTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSGRGPF*YSESRR
Trigger: ACGCCTGGACTCAGAGTAGCAAAATGGGCCTCTCCC...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAGCAGTGAGCTATGACTaGGCCACTGCATTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSAVSYD*ATAFQP
Trigger: AGGCTGGAATGCAGTGGCGCAGTCATAGCTCACTGC...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGCACAGTCTGGGTCACTaGTGCCGGGTCAGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: YHYPSIVYYILYDWQATQHSLGH*CRVSLY
Trigger: ATAAAGACTGACCCGGCAGCAGTGACCCAGACTGTG...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAATGTCAGCAATCTTTTaGTTCACCTGGTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKMSAIF*FTWCME
Trigger: CTCCATGCACCAGGTGAACCAAAAGATTGCTGACAT...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATTGAAGTTGGAATACTaGTACAGCTCTGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTLKLEY*YSSASR
Trigger: TCTGCTGGCAGAGCTGTACCAGTATTCCAACTTCAA...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAATTGAAGTTGGAATACTaGTACAGCTCTGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKLKLEY*YSSASR
Trigger: TCTGCTGGCAGAGCTGTACCAGTATTCCAACTTCAA...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCACTTCAGCCCAGCTGCTaGTCCTTTGGCAAACCAACC +
Preference number: 4 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSLQPSC*SFGKPT
Trigger: GGTTGGTTTGCCAAAGGACCAGCAGCTGGGCTGAAG...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAGGAGTTTCGCCACGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSGVSPR*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAACGTGGCGAAACTCC...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATGTGTGGAGAACTGATTaGAGGGGCAAGAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYVWRTD*RGKRKG
Trigger: GCCCTTTCTCTTGCCCCTCCAATCAGTTCTCCACAC...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAATGTGGGCTCCTGTGTaGAGAACTGATTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSMWAPV*RTDWRG
Trigger: GCCCCTCCAATCAGTTCTCCACACAGGAGCCCACAT...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
3UTR CAA 72 bp GGCAAGAGAAAGGGCAAAGAGAATGCTAGGAGAATATaGTATAACAGAAGTCCCAAGCCAGGAGTAATGGTG +
Preference number: 4 (lower is better)
Translates to: GKRKGKENARRI*YNRSPKPGVMV
Trigger: CACCATTACTCCTGGCTTGGGACTTCTGTTATACAATATTCTCCTAGCATTCTCTTTGCCCTTTCTCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
CDS-3UTR TCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACCCTTTGCAGGAATACTaGGATTTCCTTTGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYPLQEY*DFLCLL
Trigger: CAAGAGACAAAGGAAATCTCAGTATTCCTGCAAAGG...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATAGGCTGGTACCTCTCATaGAATATCCACCAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: SHCTRPRRVHFITAITTIGWYLS*NIHQKL
Trigger: TAGCTTTTGGTGGATATTTCATGAGAGGTACCAGCC...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTGCTAGGATAGGTGCCTaGAATCCACAGGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIARIGA*NPQAHC
Trigger: ACAATGAGCCTGTGGATTTCAGGCACCTATCCTAGC...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTCGGCTGAAGGTGGGATaGACATGTGGTTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIRLKVG*TCGLPF
Trigger: AAAAGGCAAACCACATGTTCATCCCACCTTCAGCCG...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTACCCATTTTGCTACTCTaGGTCCAGGCGTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLPILLL*VQAFSR
Trigger: CCTAGAGAACGCCTGGACTCAGAGTAGCAAAATGGG...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTAATTTGAGGTTGCAGTaGGCTATGACTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFNLRLQ*AMTAPL
Trigger: CAGTGGCGCAGTCATAGCTCACTGCAACCTCAAATT...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCACCACACAAGGCAGGATaGGAGGGATTAGACATGCAG +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSPHKAG*EGLDMQ
Trigger: CTGCATGTCTAATCCCTCTCATCCTGCCTTGTGTGG...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTGTACTATATTTTATATaGCTGGCAGGCAACACAGTA +
Preference number: 4 (lower is better)
Translates to: FLERVHAGMILDCATNGPVLYFI*LAGNTV
Trigger: TACTGTGTTGCCTGCCAGTCATATAAAATATAGTAC...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACCTTTGTCTTCTGGACTaGTGCGAGTTTTCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYLCLLD*CEFSLL
Trigger: TAAGAGAGAAAACTCGCAGCAGTCCAGAAGACAAAG...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACAACATTAATTCTTCTCTaGGGAATCGCTCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTTLILL*GIALGL
Trigger: TAGACCCAGAGCGATTCCGCAGAGAAGAATTAATGT...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAAGGTGGTAGAATTTCCTaGTCTGGGCTGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQGGRIS*SGLASG
Trigger: CCCAGAAGCCAGCCCAGAGCAGGAAATTCTACCACC...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCAGCTCAGGGCTTTTaGAGGCAGCACACGACTTTT +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYISAQGF*RQHTTF
Trigger: AAAAGTCGTGTGCTGCCTGCAAAAGCCCTGAGCTGA...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATACAAGATCTGCTTATCTaGTGCTTGGTTTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: SHCTRPRRVHFITAITTIQDLLI*CLVWAN
Trigger: GTTTGCCCAAACCAAGCAGCAGATAAGCAGATCTTG...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTAGCAGTGGAGCACTTGTaGCTACCTTGCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLAVEHL*LPCSWY
Trigger: ATACCAGGAGCAAGGTAGGCACAAGTGCTCCACTGC...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGATCTACTATGGTAACTaGTGCCATAATGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: SREDNAERDNHHTRQDERIYYGN*CHNGMA
Trigger: TGCCATCCCATTATGGCAGCAGTTACCATAGTAGAT...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTCAAGCAATTCTCCTaGCTCAGCCTTGCGAGTACC +
Preference number: 4 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYFKQFS*LSLAST
Trigger: GGTACTCGCAAGGCTGAGGCAGGAGAATTGCTTGAA...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAGCATTTATTCAACACTaGTCAATTCCACGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKAFIQH*SIPRLC
Trigger: GCAGAGACGTGGAATTGAGCAGTGTTGAATAAATGC...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATCAAACAGATTATTCTaGAGCTCCTTGTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTSNRLF*SSLFGW
Trigger: CCAGCCAAACAAGGAGCTCCAGAATAATCTGTTTGA...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAAGCGCCTCTTCAGAGTaGGACTTGGGTACACGAAAC +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSSASSE*DLGTRN
Trigger: GTTTCGTGTACCCAAGTCCCACTCTGAAGAGGCGCT...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAAGCGCCTCTTCAGAGTaGGACTTGGGTACACGAAAC +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKSASSE*DLGTRN
Trigger: GTTTCGTGTACCCAAGTCCCACTCTGAAGAGGCGCT...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTAGACATCAGTATACGTTaGGGTGCAGTCAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLDISIR*GAVRGA
Trigger: AGCACCCCTGACTGCACCCCAACGTATACTGATGTC...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCCTGGTTCTAGGTTGTaGAGCTCCTCAGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHPGSRL*SSSGLG
Trigger: TCCAAGCCCTGAGGAGCTCCACAACCTAGAACCAGG...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATTTCAAGACCACAGTCTaGGTCACTGCTGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHFKTTV*VTAAGS
Trigger: TGACCCGGCAGCAGTGACCCAGACTGTGGTCTTGAA...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCCCTTAGCTTGGGGCTaGATCAGTGAGGATTTGTCA +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFPLAWG*ISEDLS
Trigger: TGACAAATCCTCACTGATCCAGCCCCAAGCTAAGGG...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTTACAGATGTCAGACTTaGATTCGTGCGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFYRCQT*IRACRT
Trigger: GGTTCGACACGCACGAATTCAAGTCTGACATCTGTA...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAACATTCTCTTGCTTCTaGTATCCTCTTGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKTFSCF*YPLDFL
Trigger: CAAGAAGTCAAGAGGATATCAGAAGCAAGAGAATGT...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACACATTCTCTTGCTTCTaGTATCCTCTTGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYTFSCF*YPLDFL
Trigger: CAAGAAGTCAAGAGGATATCAGAAGCAAGAGAATGT...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTGCTGGTACAACTGATTaGGGTTGTCTTTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIAGTTD*GCLSAS
Trigger: AGAAGCGGAAAGACAACCTCAATCAGTTGTACCAGC...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATTCCTCATTGACGGCTaGAGGTGGGATGAACATGTG +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSFLIDG*RWDEHV
Trigger: CACATGTTCATCCCACCTTCAGCCGTCAATGAGGAA...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAAGCGAGACAGCCAGGTaGTCATCCACTGGTATCATA +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKSETAR*SSTGII
Trigger: TATGATACCAGTGGATGAGCACCTGGCTGTCTCGCT...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCACCATTGTATTCCGTaGGACAAGCGAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHHHCIP*DKRDSQ
Trigger: CTGGCTGTCTCGCTTGTCGCACGGAATACAATGGTG...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGTCAGACTTGAATTCGTaGGTGTCGAACCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: YHYPSIVYYILYDWQATQSDLNS*VSNQDC
Trigger: ACAGTCCTGGTTCGACACGCACGAATTCAAGTCTGA...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAGCTCAGGGCTTTTaGAGGCAGCACACGACTTTT +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSSAQGF*RQHTTF
Trigger: AAAAGTCGTGTGCTGCCTGCAAAAGCCCTGAGCTGA...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCCTTGTACTCGGCAGGTaGTCACACGTTCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCLVLGR*SHVLVS
Trigger: TGAAACCAGAACGTGTGAGCACCTGCCGAGTACAAG...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAGCTTATTTGGGGAACTaGAAGTGGTTCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSAYLGN*KWFWWR
Trigger: CCTCCACCAGAACCACTTGCAGTTCCCCAAATAAGC...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCTGGAGCTCCTTGTTTaGCTGGTACCTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFLELLV*LVPLMK
Trigger: TTTCATGAGAGGTACCAGCCAAACAAGGAGCTCCAG...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATATCAAACAGATTATTCTaGAGCTCCTTGTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SHCTRPRRVHFITAITTISNRLF*SSLFGW
Trigger: CCAGCCAAACAAGGAGCTCCAGAATAATCTGTTTGA...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTAGTCGAACCAGGACTGTaGAAAGCAGCAACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLVEPGL*KAATEA
Trigger: AGCTTCTGTTGCTGCTTTCCACAGTCCTGGTTCGAC...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATATTCTTCATTTCCCTaGAGAAGTTGTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTYSSFP*RSCLAA
Trigger: AGCTGCAAGACAACTTCTCCAGGGAAATGAAGAATA...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGAACTCAATTTCTCTTTaGAGACTTCCCTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMNSISL*RLPLVF
Trigger: GAAAACTAAGGGAAGTCTCCAAAGAGAAATTGAGTT...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTAGCAACACTTGCTCCTaGTATATTAGGGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFSNTCS*YIREGS
Trigger: GGAGCCTTCCCTAATATACCAGGAGCAAGTGTTGCT...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355830.11
CDS-3UTR CCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCAAGAGTTGACAGTGGCTaGGGTAGTAAAGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSRVDSG*GSKGKV
Trigger: CACCTTCCCTTTACTACCCCAGCCACTGTCAACTCT...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAGCTGCCATAATGGGATaGCACAGAATGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKAAIMG*HRMLLE
Trigger: CTCCAACAGCATTCTGTGCCATCCCATTATGGCAGC...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTGTAATACAGTTCATATaGGAATGGCATGATAAATGC +
Preference number: 4 (lower is better)
Translates to: FLERVHAGMILDCATNGPVIQFI*EWHDKC
Trigger: GCATTTATCATGCCATTCCCATATGAACTGTATTAC...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATGGCTGGAGTGTGCAGTaGCATGATCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHGWSVQ*HDHSSL
Trigger: CAGTGAGCTATGATCATGCCACTGCACACTCCAGCC...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
3UTR CAA 72 bp AGGAGTAATGGTGCTTTAAACAAGAAGAGCCTCAATTaGAAAATGGGGGAAATTGTACCTCATTCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RSNGALNKKSLN*KMGEIVPHSQG
Trigger: GCCCTGTGAATGAGGTACAATTTCCCCCATTTTCAAATTGAGGCTCTTCTTGTTTAAAGCACCATTACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
CDS-3UTR TCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATTGTACACGGCTTTGCTaGGAAGTGATGGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHCTRLC*EVMAAF
Trigger: AAAGGCTGCCATCACTTCTCAGCAAAGCCGTGTACA...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATACAGATGTCAGACTTaGATTCGTGCGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSYRCQT*IRACRT
Trigger: GGTTCGACACGCACGAATTCAAGTCTGACATCTGTA...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAAGCCTGTGCCCCTCAGTaGAATATCTTCTGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQACAPQ*NIFCPK
Trigger: TTTGGGACAGAAGATATTTCACTGAGGGGCACAGGC...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTCACTGCCTTGTGCCTTaGAGCTCAAATGATAAAACC +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIHCLVP*SSNDKT
Trigger: GGTTTTATCATTTGAGCTTCAAGGCACAAGGCAGTG...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCATGTGTGTCTGAGGGATaGGCTACATTTCCCAAGATC +
Preference number: 4 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSCVSEG*ATFPKI
Trigger: GATCTTGGGAAATGTAGCTCATCCCTCAGACACACA...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTATGTTTCAGGTCTCATaGTTTTCCTGCCCTAGACCT +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFMFQVS*FSCPRP
Trigger: AGGTCTAGGGCAGGAAAATCATGAGACCTGAAACAT...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGGAACGAGTATTTGTTaGACACCCAATAATGATCAT +
Preference number: 4 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYGTSIC*TPNNDH
Trigger: ATGATCATTATTGGGTGTTCAACAAATACTCGTTCC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTTCGTTACGTGGTGCATaGCTGTGTGTATGTATACAC +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFSLRGA*LCVCIH
Trigger: GTGTATACATACACACAGTCATGCACCACGTAACGA...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTGCCCAAATTTTCTCATaGCAAAGCCTAAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFAQIFS*QSLSSF
Trigger: GAAGGAGCTTAGGCTTTGGCATGAGAAAATTTGGGC...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTATCTTTTGGTTCACCTaGTGCATGGAGCCAATAAGG +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFIFWFT*CMEPIR
Trigger: CCTTATTGGCTCCATGCACCAGGTGAACCAAAAGAT...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGATCTTTTGGTTCACCTaGTGCATGGAGCCAATAAGG +
Preference number: 4 (lower is better)
Translates to: YHYPSIVYYILYDWQATQIFWFT*CMEPIR
Trigger: CCTTATTGGCTCCATGCACCAGGTGAACCAAAAGAT...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGATGTCAGCAATCTTTTaGTTCACCTGGTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: YHYPSIVYYILYDWQATQMSAIF*FTWCME
Trigger: CTCCATGCACCAGGTGAACCAAAAGATTGCTGACAT...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTACTGGAGCTCCTTGTTTaGCTGGTACCTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLLELLV*LVPLMK
Trigger: TTTCATGAGAGGTACCAGCCAAACAAGGAGCTCCAG...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATATATTCTTCATTTCCCTaGAGAAGTTGTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SHCTRPRRVHFITAITTIYSSFP*RSCLAA
Trigger: AGCTGCAAGACAACTTCTCCAGGGAAATGAAGAATA...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCATGGAGCATAATGCAGTaGAGCACTTGTGCCTACCTT +
Preference number: 4 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSWSIMQ*STCAYL
Trigger: AAGGTAGGCACAAGTGCTCCACTGCATTATGCTCCA...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCATTGGCTTGGAGCTGTTaGAGTTGGAATACTGGTACA +
Preference number: 4 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSLAWSC*SWNTGT
Trigger: TGTACCAGTATTCCAACTTCAACAGCTCCAAGCCAA...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAGGCTGGTACCTCTCATaGAATATCCACCAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSGWYLS*NIHQKL
Trigger: TAGCTTTTGGTGGATATTTCATGAGAGGTACCAGCC...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTAATGTTGAAGAGGTTTaGAGTCAGCTCAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFNVEEV*SQLRAF
Trigger: AAAAGCCCTGAGCTGACTTCAAACCTCTTCAACATT...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTAATGTTGAAGAGGTTTaGAGTCAGCTCAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYINVEEV*SQLRAF
Trigger: AAAAGCCCTGAGCTGACTTCAAACCTCTTCAACATT...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTATTTTGGTTCACCTGGTaGATGGAGCCAATAAGGCAT +
Preference number: 4 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLFWFTW*MEPIRH
Trigger: ATGCCTTATTGGCTCCATGCACCAGGTGAACCAAAA...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTCTTTGTCTTCTGGACTaGTGCGAGTTTTCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYILCLLD*CEFSLL
Trigger: TAAGAGAGAAAACTCGCAGCAGTCCAGAAGACAAAG...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTATACTGGTACAGCTCTaGCAGCAGATTTTTATCTGC +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIILVQL*QQIFIC
Trigger: GCAGATAAAAATCTGCTGGCAGAGCTGTACCAGTAT...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAATCAGACTTGAATTCGTaGGTGTCGAACCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQSDLNS*VSNQDC
Trigger: ACAGTCCTGGTTCGACACGCACGAATTCAAGTCTGA...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGCACACTGGCTTCATCTaGCTTGGTTTTTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: YHYPSIVYYILYDWQATQHTGFI*LGFSQI
Trigger: AATCTGAGAAAAACCAAGGCAGATGAAGCCAGTGTG...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAATACTATGGTAACTGCTaGCATAATGGGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKYYGNC*HNGMAQ
Trigger: CTGTGCCATCCCATTATGGCAGCAGTTACCATAGTA...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTCTTCTACCTTTCCCATaGTTTTTGTTCGAACAACCC +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYILLPFP*FLFEQP
Trigger: GGGTTGTTCGAACAAAAACCATGGGAAAGGTAGAAG...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATAAGAAGGCAGAAGCCTaGGAGTCACACAGAAACACA +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHKKAEA*ESHRNT
Trigger: TGTGTTTCTGTGTGACTCCCAGGCTTCTGCCTTCTT...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGGGTGCTCACACGTTCTaGTTTCAGAAGACTATACTT +
Preference number: 4 (lower is better)
Translates to: YHYPSIVYYILYDWQATQGAHTF*FQKTIL
Trigger: AAGTATAGTCTTCTGAAACCAGAACGTGTGAGCACC...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACACAGTTCATATGGGAATaGCATGATAAATGCTTATTC +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTQFIWE*HDKCLF
Trigger: GAATAAGCATTTATCATGCCATTCCCATATGAACTG...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACAAGACTATTTGATAGGTaGTCTTATGGTCTAGTATCA +
Preference number: 4 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTRLFDR*SYGLVS
Trigger: TGATACTAGACCATAAGACCACCTATCAAATAGTCT...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGCACATTTTGTTTCAATaGGATCCAAATAATGTCCAC +
Preference number: 4 (lower is better)
Translates to: SREDNAERDNHHTRQDERHILFQ*DPNNVH
Trigger: GTGGACATTATTTGGATCCCATTGAAACAAAATGTG...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAATTGGGGAACTGCAAGTaGTTCTGGTGGAGGATTTTA +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKLGNCK*FWWRIL
Trigger: TAAAATCCTCCACCAGAACCACTTGCAGTTCCCCAA...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCAACACAGAGGCTTATTTaGGGAACTGCAAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSTQRLI*GTASGS
Trigger: AGAACCACTTGCAGTTCCCCAAATAAGCCTCTGTGT...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
3UTR CAA 72 bp GACTTTTGCTATGGTAGGAATGAACTTTACTATTCCTaGTCTCATGAACTGGGAGTGACTAAATGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: DFCYGRNELYYS*SHELGVTKCVP
Trigger: AGGGACACATTTAGTCACTCCCAGTTCATGAGACAAGGAATAGTAAAGTTCATTCCTACCATAGCAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
3UTR CAA 72 bp GTCTTTCTGACAGGATCCTTGTCTTTGATAGCTTCCTaGGTGTTAAGTGTGATAAGATGTTTCAGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: VFLTGSLSLIAS*VLSVIRCFRSH
Trigger: ATGAGACCTGAAACATCTTATCACACTTAACACCAAGGAAGCTATCAAAGACAAGGATCCTGTCAGAAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
CDS-3UTR TCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCACCTTTGCAGGAATACTaGGATTTCCTTTGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSPLQEY*DFLCLL
Trigger: CAAGAGACAAAGGAAATCTCAGTATTCCTGCAAAGG...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATTTGGCTTGGAGCTGTTaGAGTTGGAATACTGGTACA +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHLAWSC*SWNTGT
Trigger: TGTACCAGTATTCCAACTTCAACAGCTCCAAGCCAA...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAACTGGAGAAGTTGTCTTaGAGCTCCTTTAGATGCTTG +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQLEKLS*SSFRCL
Trigger: CAAGCATCTAAAGGAGCTGCAAGACAACTTCTCCAG...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR GCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGACATTTCCCAAGATCTaGTTATCTGCTGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: YHYPSIVYYILYDWQATQTFPKI*LSAAWF
Trigger: AAACCAAGCAGCAGATAAGCAGATCTTGGGAAATGT...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATAGGCGTATGCCACCTTaGTCTGCTAATTTTTACTTT +
Preference number: 4 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYRRMPP*SANFYF
Trigger: AAAGTAAAAATTAGCAGAGCAAGGTGGCATACGCCT...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTAATGATAGCCAGTACATaGTGCACTTACCATGTGTCA +
Preference number: 4 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLMIAST*CTYHVS
Trigger: TGACACATGGTAAGTGCAGCATGTACTGGCTATCAT...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAACTTGACTTTGTCTTCTaGACTGCTGCGAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQLDFVF*TAASFL
Trigger: GAGAAAACTCGCAGCAGTCCAGAAGACAAAGTCAAG...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCACTTCTACCTTTCCCATaGTTTTTGTTCGAACAACCC +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSLLPFP*FLFEQP
Trigger: GGGTTGTTCGAACAAAAACCATGGGAAAGGTAGAAG...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTCTGTATTTCCTGTTATaGTGGTTGGATCTAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SPAIPPVLQETVCSKTYILYFLL*WLDLEF
Trigger: GAACTCTAGATCCAACCACCATAACAGGAAATACAG...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAACAGCATTTAATGTGTTaGTACATCTGTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKQHLMC*YICLPS
Trigger: AGAGGGAAGACAGATGTATCAACACATTAAATGCTG...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCGTGGCAATTACAAAGTaGAAAGTACTGTGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCVAITK*KVLCQE
Trigger: TTCTTGGCACAGTACTTTTCACTTTGTAATTGCCAC...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCATCATATTTAACATCCTaGGAGGCTACAACTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSSYLTS*EATTLS
Trigger: ACTCAGAGTTGTAGCCTCTCAGGATGTTAAATATGA...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATATAAGGAGACCTTCTTaGTGTATGGGGGCTAATAGT +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHIRRPS*CMGANS
Trigger: ACTATTAGCCCCCATACAGCAAGAAGGTCTCCTTAT...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAAAAAATGAAGTCATTTaGCCTGGAGTTTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKKNEVI*PGVFHG
Trigger: GCCATGGAAAACTCCAGGGCAAATGACTTCATTTTT...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
38% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGTGTCCAAGAGAGGCTTaGTATGACAGTTTATTTTAC +
Preference number: 4 (lower is better)
Translates to: YHYPSIVYYILYDWQATQCPREA*YDSLFY
Trigger: GTAAAATAAACTGTCATAGCAAGCCTCTCTTGGACA...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAAACATCGTTACGTGGTaGATGACTGTGTGTATGTAT +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSNIVTW*MTVCMY
Trigger: ATACATACACACAGTCATGCACCACGTAACGATGTT...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAAATTCGGAAGCTTGTTTaGCTTGGAGCTGTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQIRKLV*LGAVEV
Trigger: AACTTCAACAGCTCCAAGCCAAACAAGCTTCCGAAT...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATATTCGGAAGCTTGTTTaGCTTGGAGCTGTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHIRKLV*LGAVEV
Trigger: AACTTCAACAGCTCCAAGCCAAACAAGCTTCCGAAT...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATTCTTCCCATAAATGTTaGAGAGGTTTGAAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHSSHKC*RGLKSA
Trigger: AGCTGACTTCAAACCTCTTCAACATTTATGGGAAGA...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR TCA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCCTGAGTTTCGGTATCTaGAAACCAAGAATAATATCG +
Preference number: 4 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCLSFGI*KPRIIS
Trigger: CGATATTATTCTTGGTTTTCAGATACCGAAACTCAG...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR TCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAAAGAGAGGCTTGCTATaGCAGTTTATTTTACTAGCA +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKKRGLL*QFILLA
Trigger: TGCTAGTAAAATAAACTGTCATAGCAAGCCTCTCTT...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR GCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATGTTTTCAGCAACACTTaGTCCTGGTATATTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHVFSNT*SWYIRE
Trigger: TTCCCTAATATACCAGGAGCAAGTGTTGCTGAAAAC...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355830.11
CDS-3UTR GCA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATCAGACAACATGTGCATaGTTTACCTATAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYQTTCA*FTYKVS
Trigger: AGAAACTTTATAGGTAAAGCATGCACATGTTGTCTG...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAACTGCGTAAAATGCAGTaGATAATCCCTACTTCATAC +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQLRKMQ*IIPTSY
Trigger: GTATGAAGTAGGGATTATCCACTGCATTTTACGCAG...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAAGAAATAGGAAAGTGTaGTTCCTAGAGAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKRNRKV*FLEKLQ
Trigger: TTGCAGTTTCTCTAGGAACCACACTTTCCTATTTCT...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATATTTCCTGTTATGGTaGTTGGATCTAGAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: AIPPVLQETVCSKTYISSYFLLW*LDLEFR
Trigger: TCTGAACTCTAGATCCAACCACCATAACAGGAAATA...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CCA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAATGCAAGTGGTTCTGGTaGAGGATTTTAATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKCKWFW*RILISK
Trigger: TTTTGAAATTAAAATCCTCCACCAGAACCACTTGCA...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
3UTR CAA 72 bp CTCTTAACTGACATGCTAAACCACTATATGGCAGGCTaGTATATTCATATCTTGACTTTATTTTCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LLTDMLNHYMAG*YIHILTLFSCH
Trigger: ATGACAGGAAAATAAAGTCAAGATATGAATATACAAGCCTGCCATATAGTGGTTTAGCATGTCAGTTAAGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535113.6
ENST00000540952.6
CDS-3UTR CCA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATAACTCAATTTCTCTTTaGAGACTTCCCTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHNSISL*RLPLVF
Trigger: GAAAACTAAGGGAAGTCTCCAAAGAGAAATTGAGTT...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CCA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAATCCATTATAATCTTATaGGACCACCGTCATATATTC +
Preference number: 4 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQSIIIL*DHRHIF
Trigger: GAATATATGACGGTGGTCCCATAAGATTATAATGGA...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS TCA 90 bp ACCTTCGTGAGCCGCCGCGTTGTCCGCGAGATGCCGTTTCTATGGTaGCAGCCGGGCCGGGGGCCCAGACCAATGTGTCAGTGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: TFVSRRVVREMPFLW*QPGRGPRPMCQWRG
Trigger: CCCTCTCCACTGACACATTGGTCTGGGCCCCCGGCCCGGCTGTCACCATAGAAACGGCATCTCGCGGACAACGCGGCGGCTCACGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGGTGCTCACACGTTCTGTCAATTGCCAGGCTGTaGGCCGACGGCTCGGTACGC +
Preference number: 5 (lower is better)
Translates to: LLICPTWCLVLGRCSHVLSIARL*ADGSVR
Trigger: GCGTACCGAGCCGTCGGCCAACAGCCTGGCAATTGA...CAGAACGTGTGAGCACCTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS TCA 90 bp GGCGCGGTCTCCACTTTCCCGTTTAGCATAACAATGGAACCTTCGTaGGCCGCCGCGTTGTCCGCGAGATGCCGTTTCTATGGTGACAGC +
Preference number: 5 (lower is better)
Translates to: GAVSTFPFSITMEPS*AAALSARCRFYGDS
Trigger: GCTGTCACCATAGAAACGGCATCTCGCGGACAACGCGGCGGCTCACGAAGGTTCCATTGTTATGCTAAACGGGAAAGTGGAGACCGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS TCA 90 bp CCCCAGAAGACACTGCCTTTGTATAATCCGTTTGCTATCCCGAGGTaGTTCACGGAGTTTCTGGGGATTGGCGCAGGCTGGCGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: PQKTLPLYNPFAIPR*FTEFLGIGAGWRWE
Trigger: TTCCCAGCGCCAGCCTGCGCCAATCCCCAGAAACTCCGTGAATCACCTCGGGATAGCAAACGGATTATACAAAGGCAGTGTCTTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTAAAGCATCGGCGGAATTaGACGAACCCGGGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLKHRRN*TNPGPV
Trigger: GACCGGCCCCGGGTTCGTCAAATTCCGCCGATGCTT...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp AAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGTGGAGTTTCGCCACGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KVRECSAYLPHMVPCTRQWSFAT*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACGTGGCGAAACTCCA...CTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp AAGGTGAGAGAGTGTTCTGCTTATCTGCCCCACATGGTGCCTTGTACTCGGCAGTGCAATAGCATGGTCTaGGCTCACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: KVRECSAYLPHMVPCTRQCNSMV*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGACCATGCTATTGCA...CTGCCGAGTACAAGGCACCATGTGGGGCAGATAAGCAGAACACTCTCTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGTGGATCAGTGAGGATTaGTCAATCGGGCAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: MFARQKEGILEIGWQSQWWISED*SIGQGG
Trigger: CCCGCCCTGCCCGATTGACAAATCCTCACTGATCCA...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS TCA 90 bp AGGACTGTGGAAAGCAGCAACAGAAGCTGGTGTACACGGCTTTGCTaGGAAGTGATGGCAGCCTTTTTAAGAGCGCCTCTTCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: RTVESSNRSWCTRLC*EVMAAFLRAPLQSG
Trigger: CCCACTCTGAAGAGGCGCTCTTAAAAAGGCTGCCATCACTTCTCAGCAAAGCCGTGTACACCAGCTTCTGTTGCTGCTTTCCACAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000543295.1
ENST00000544346.5
CDS TCA 90 bp ACAGAAGATCTGGCATGTCTGAGTTCGGAGCCTTTGCAGGAATACTaGGATTTCCTTTGTCTCTTGACAGGCTGTTGGCCGACGGCTCGG +
Preference number: 5 (lower is better)
Translates to: TEDLACLSSEPLQEY*DFLCLLTGCWPTAR
Trigger: CCGAGCCGTCGGCCAACAGCCTGTCAAGAGACAAAGGAAATCTCAGTATTCCTGCAAAGGCTCCGAACTCAGACATGCCAGATCTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424706.5
CDS GCA 90 bp ACAGTCTTCACCATTGTATTCCGTGCGACAAGCGAGACAGCCAGGTaGTCATCCACTGGTATCATAGGTAGGGTGGTGAGGTTGATGACC +
Preference number: 5 (lower is better)
Translates to: TVFTIVFRATSETAR*SSTGIIGRVVRLMT
Trigger: GGTCATCAACCTCACCACCCTACCTATGATACCAGTGGATGAGCACCTGGCTGTCTCGCTTGTCGCACGGAATACAATGGTGAAGACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355830.11
ENST00000424706.5
ENST00000484582.1
ENST00000490082.1
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
ENST00000608409.5
CDS-3UTR CAA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAATCAATTGCCAGGCTGTaGGCCGACGGCTCGGTACGC +
Preference number: 5 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKSIARL*ADGSVR
Trigger: GCGTACCGAGCCGTCGGCCAACAGCCTGGCAATTGA...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp AGGTTAAGTAACTTGCCTGAGGCTCACAGTCTGGCTCCAGTGACCATGCTCTTACTGGTGTACACGGCTTaGCTGAGAAGTGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: RLSNLPEAHSLAPVTMLLLVYTA*LRSDGS
Trigger: GCTGCCATCACTTCTCAGCAAAGCCGTGTACACCAG...TAAGAGCATGGTCACTGGAGCCAGACTGTGAGCCTCAGGCAAGTTACTTAACCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGTGCAGTGGCATGATCTaGGCTCACTGTAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: MFARQKEGILEIGWQSQWCSGMI*AHCNLR
Trigger: GCGGAGGTTACAGTGAGCCAAGATCATGCCACTGCA...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTACTATTTGGTTACCTGGTAATACAGTTCATATGGGAATGGCATGATAAATGCCGGAGTTTCTGGGGATaGGCGCAGGCTGGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: LLFGYLVIQFIWEWHDKCRSFWG*AQAGAG
Trigger: CCCAGCGCCAGCCTGCGCCAATCCCCAGAAACTCCG...GCATTTATCATGCCATTCCCATATGAACTGTATTACCAGGTAACCAAATAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGAGGAGGTTAAGTAACTaGCCTGAGGCTCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: MFARQKEGILEIGWQSQWRRLSN*PEAHSL
Trigger: CAGACTGTGAGCCTCAGGCAAGTTACTTAACCTCCT...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS GCA 90 bp GGCTCGGTACGCAGATTTATGTCAGCAATCTTTTGGTTCACCTGGTaGATGGAGCCAATAAGGCATGAGGGTGGATTGTTCTCTAACTCC +
Preference number: 5 (lower is better)
Translates to: GSVRRFMSAIFWFTW*MEPIRHEGGLFSNS
Trigger: GGAGTTAGAGAACAATCCACCCTCATGCCTTATTGGCTCCATGCACCAGGTGAACCAAAAGATTGCTGACATAAATCTGCGTACCGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355830.11
ENST00000424706.5
ENST00000484582.1
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
ENST00000608409.5
CDS CCA 90 bp GACGGCTCGGTACGCAGATTTATGTCAGCAATCTTTTGGTTCACCTaGTGCATGGAGCCAATAAGGCATGAGGGTGGATTGTTCTCTAAC +
Preference number: 5 (lower is better)
Translates to: DGSVRRFMSAIFWFT*CMEPIRHEGGLFSN
Trigger: GTTAGAGAACAATCCACCCTCATGCCTTATTGGCTCCATGCACCAGGTGAACCAAAAGATTGCTGACATAAATCTGCGTACCGAGCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355830.11
ENST00000424706.5
ENST00000484582.1
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
ENST00000608409.5
CDS-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAGGGGTGCCCTTTGCCTaGTGCTGGGGGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKGVPFA*CWGMRR
Trigger: CCTCCTCATCCCCCAGCACAAGGCAAAGGGCACCCC...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGACTATCAACACATTCTaGCCGTGCTGCTGCAGACTG +
Preference number: 5 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMTINTF*PCCCRL
Trigger: CAGTCTGCAGCAGCACGGCAAGAATGTGTTGATAGT...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACTTCCTGGTTCTAGGTaGTGGAGCTCCTCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKLPGSR*WSSSGL
Trigger: AAGCCCTGAGGAGCTCCACAACCTAGAACCAGGAAG...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACACTTCCTGGTTCTAGGTaGTGGAGCTCCTCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTLPGSR*WSSSGL
Trigger: AAGCCCTGAGGAGCTCCACAACCTAGAACCAGGAAG...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS TCA 90 bp CACAGAAGTCCACGCCATTCGGAAGCTTGTTTGGCTTGGAGCTGTTaGAGTTGGAATACTGGTACAGCTCTGCCAGCAGATTTTTATCTG +
Preference number: 5 (lower is better)
Translates to: HRSPRHSEACLAWSC*SWNTGTALPADFYL
Trigger: CAGATAAAAATCTGCTGGCAGAGCTGTACCAGTATTCCAACTTCAACAGCTCCAAGCCAAACAAGCTTCCGAATGGCGTGGACTTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
CDS TCA 90 bp AGTTCTGGAGAAAGTACACAATCAGAGGGCTCTTCCCATAAATGTTaGAGAGGTTTGAAGTCAGCTCAGGGCTTTTGCAGGCAGCACACG +
Preference number: 5 (lower is better)
Translates to: SSGESTQSEGSSHKC*RGLKSAQGFCRQHT
Trigger: CGTGTGCTGCCTGCAAAAGCCCTGAGCTGACTTCAAACCTCTTCAACATTTATGGGAAGAGCCCTCTGATTGTGTACTTTCTCCAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000544346.5
CDS-3UTR CAA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATGGGGTGCCCTTTGCCTaGTGCTGGGGGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHGVPFA*CWGMRR
Trigger: CCTCCTCATCCCCCAGCACAAGGCAAAGGGCACCCC...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGACGCCATTCGGAAGCTaGTTTGGCTTGGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SREDNAERDNHHTRQDERTPFGS*FGLELL
Trigger: CAACAGCTCCAAGCCAAACAAGCTTCCGAATGGCGT...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGGAGCTCCTCAGGGCTaGGAAGTGAGTGGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYGAPQG*EVSGKK
Trigger: TTTCTTTCCACTCACTTCCAAGCCCTGAGGAGCTCC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAGGAGCTCCTCAGGGCTaGGAAGTGAGTGGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKGAPQG*EVSGKK
Trigger: TTTCTTTCCACTCACTTCCAAGCCCTGAGGAGCTCC...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGGAAAAGACAAGATGTTaGCCAGGCAGAAAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMEKTRC*PGRKRA
Trigger: TGCCCTCTTTCTGCCTGGCAAACATCTTGTCTTTTC...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTACCATTTCTTTCCTCTaGGCTGTGACAGGTGAACTG +
Preference number: 5 (lower is better)
Translates to: FLERVHAGMILDCATNGPTISFL*AVTGEL
Trigger: CAGTTCACCTGTCACAGCCAAGAGGAAAGAAATGGT...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAAGGCTCTCTCTGGGGTaGCGGGGATGGTGGCCCTTA +
Preference number: 5 (lower is better)
Translates to: AIPPVLQETVCSKTYISSRLSLG*RGWWPL
Trigger: TAAGGGCCACCATCCCCGCAACCCCAGAGAGAGCCT...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAAAAGCATCGGCGGAATTaGACGAACCCGGGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQKHRRN*TNPGPV
Trigger: GACCGGCCCCGGGTTCGTCAAATTCCGCCGATGCTT...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACTCACAGTCTTCACCATaGTATTCCGTGCGACAAGCG +
Preference number: 5 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYSQSSP*YSVRQA
Trigger: CGCTTGTCGCACGGAATACAATGGTGAAGACTGTGA...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTTATGTCAGCAATCTTTaGGTTCACCTGGTGCATGGA +
Preference number: 5 (lower is better)
Translates to: FLERVHAGMILDCATNGPYVSNL*VHLVHG
Trigger: TCCATGCACCAGGTGAACCAAAAGATTGCTGACATA...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACCTGAACAGAAATGCTaGCCACTAAGGCAGTCTCTC +
Preference number: 5 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKPEQKC*PLRQSL
Trigger: GAGAGACTGCCTTAGTGGCAAGCATTTCTGTTCAGG...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATCTGGAGCTCCTTGTTaGGCTGGTACCTCTCATGAA +
Preference number: 5 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTSGAPC*AGTSHE
Trigger: TTCATGAGAGGTACCAGCCAAACAAGGAGCTCCAGA...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp ATGTTTGCCAGGCAGAAAGAGGGCATATTGGAAATAGGCTGGCAATCCCAGTGGTATCCTCTTGACTTCTaGCGTAGGTTTCTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: MFARQKEGILEIGWQSQWYPLDF*RRFLQD
Trigger: GTCTTGAAGAAACCTACGCAAGAAGTCAAGAGGATA...CCACTGGGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTGCCTGGCAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGGCTTCTGATATCCTCTaGACTTCTTGCGTAGGTTTC +
Preference number: 5 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMASDIL*TSCVGF
Trigger: GAAACCTACGCAAGAAGTCAAGAGGATATCAGAAGC...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAACTATCAACACATTCTaGCCGTGCTGCTGCAGACTG +
Preference number: 5 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKTINTF*PCCCRL
Trigger: CAGTCTGCAGCAGCACGGCAAGAATGTGTTGATAGT...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATATCAGGTGATTCCTCATaGACGGCTGAAGGTGGGATG +
Preference number: 5 (lower is better)
Translates to: SHCTRPRRVHFITAITTISGDSS*TAEGGM
Trigger: CATCCCACCTTCAGCCGTCAATGAGGAATCACCTGA...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTACCAGCTGCTGGTCCTTaGGCAAACCAACCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLPAAGP*ANQPLC
Trigger: GCACAGGGGTTGGTTTGCCAAAGGACCAGCAGCTGG...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS TCA 90 bp AAAGTACACAATCAGAGGGCTCTTCCCATAAATGTTGAAGAGGTTTaGAGTCAGCTCAGGGCTTTTGCAGGCAGCACACGACTTTTTAGG +
Preference number: 5 (lower is better)
Translates to: KVHNQRALPINVEEV*SQLRAFAGSTRLFR
Trigger: CCTAAAAAGTCGTGTGCTGCCTGCAAAAGCCCTGAGCTGACTTCAAACCTCTTCAACATTTATGGGAAGAGCCCTCTGATTGTGTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000544346.5
CDS TCA 90 bp ACAGAAGATCTGGCATGTCTGAGTTCGGAGCCTTTGCAGGAATACTaGGATTTCCTTTGTCTCTTGACCCATGAAAAGAGCATCAAGGCT +
Preference number: 5 (lower is better)
Translates to: TEDLACLSSEPLQEY*DFLCLLTHEKSIKA
Trigger: AGCCTTGATGCTCTTTTCATGGGTCAAGAGACAAAGGAAATCTCAGTATTCCTGCAAAGGCTCCGAACTCAGACATGCCAGATCTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544346.5
CDS-3UTR CAA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATTCAGCCCGGACCACGTaGCCCACCATGTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHSARTT*PTMSQK
Trigger: CTTCTGTGACATGGTGGGCAACGTGGTCCGGGCTGA...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAATCAGCCCGGACCACGTaGCCCACCATGTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQSARTT*PTMSQK
Trigger: CTTCTGTGACATGGTGGGCAACGTGGTCCGGGCTGA...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAATTATTCTGGAGCTCCTaGTTTGGCTGGTACCTCTCA +
Preference number: 5 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKLFWSS*FGWYLS
Trigger: TGAGAGGTACCAGCCAAACAAGGAGCTCCAGAATAA...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCTGGTGTACACGGCTTaGCTGAGAAGTGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFLVYTA*LRSDGS
Trigger: GCTGCCATCACTTCTCAGCAAAGCCGTGTACACCAG...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGAATGCAGTGGAGCACTaGTGCCTACCTTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: YHYPSIVYYILYDWQATQNAVEH*CLPCSW
Trigger: CCAGGAGCAAGGTAGGCACAAGTGCTCCACTGCATT...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAAACACAGAGGCTTATTaGGGGAACTGCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKNTEAY*GNCKWF
Trigger: GAACCACTTGCAGTTCCCCAAATAAGCCTCTGTGTT...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATTTGGCTTGGAGCTGTaGAAGTTGGAATACTGGTAC +
Preference number: 5 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTFGLEL*KLEYWY
Trigger: GTACCAGTATTCCAACTTCAACAGCTCCAAGCCAAA...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATTACAGATGTCAGACTaGAATTCGTGCGTGTCGAAC +
Preference number: 5 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTLQMSD*NSCVSN
Trigger: GTTCGACACGCACGAATTCAAGTCTGACATCTGTAA...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp AGGCAGGCATTCCCTTTCTGCAGTCAAGAAAGCACGTTCAGAAAGGTCAAGATGGACAATGATGCTCTTTaGCAGTATTCTGCATTCGTA +
Preference number: 5 (lower is better)
Translates to: RQAFPFCSQESTFRKVKMDNDAL*QYSAFV
Trigger: TACGAATGCAGAATACTGCAAAAGAGCATCATTGTC...CATCTTGACCTTTCTGAACGTGCTTTCTTGACTGCAGAAAGGGAATGCCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAGCTTCTGATATCCTCTaGACTTCTTGCGTAGGTTTC +
Preference number: 5 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKASDIL*TSCVGF
Trigger: GAAACCTACGCAAGAAGTCAAGAGGATATCAGAAGC...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp ACATTTAAAGTGTATTTAGGTGTGTATACACCCATGAGCCATTCACCACAATCAGTCAGCTCAGGGCTTTaGCAGGCAGCACACGACTTT +
Preference number: 5 (lower is better)
Translates to: TFKVYLGVYTPMSHSPQSVSSGL*QAAHDF
Trigger: AAAGTCGTGTGCTGCCTGCAAAAGCCCTGAGCTGAC...TGATTGTGGTGAATGGCTCATGGGTGTATACACACCTAAATACACTTTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCCCTGGAGAAGTaGTCTTGCAGCTCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYISLEK*SCSSFR
Trigger: TCTAAAGGAGCTGCAAGACAACTTCTCCAGGGAAAT...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATACTGGCTTCATCTGCCTaGGTTTTTCTCAGATTCCAC +
Preference number: 5 (lower is better)
Translates to: SHCTRPRRVHFITAITTILASSA*VFLRFH
Trigger: GTGGAATCTGAGAAAAACCAAGGCAGATGAAGCCAG...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAACTATGTTACCCGGTTaGGTCTCACCTCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKTMLPG*VSPPGL
Trigger: GAGCCCAGGAGGTGAGACCAAACCGGGTAACATAGT...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTAGGCATGAGGGTGGATaGTTCTCTAACTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIRHEGG*FSNSFL
Trigger: GAGGAAGGAGTTAGAGAACAATCCACCCTCATGCCT...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGAGGCATGAGGGTGGATaGTTCTCTAACTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: YHYPSIVYYILYDWQATQRHEGG*FSNSFL
Trigger: GAGGAAGGAGTTAGAGAACAATCCACCCTCATGCCT...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACGATTTCCTTTGTCTCTaGACTTTGTCTTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYDFLCL*TLSSGL
Trigger: CAGTCCAGAAGACAAAGTCAAGAGACAAAGGAAATC...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TTTCTGGAAAGGGTCCATGCAGGGATGATCTTGGACTGTGCAACAAATGGTCCTATACTGAGATTTCCTTaGTCTCTTGACTTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: FLERVHAGMILDCATNGPILRFP*SLDFVF
Trigger: GAAGACAAAGTCAAGAGACAAAGGAAATCTCAGTAT...AGGACCATTTGTTGCACAGTCCAAGATCATCCCTGCATGGACCCTTTCCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCAACGCCATTCGGAAGCTaGTTTGGCTTGGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: AIPPVLQETVCSKTYISSTPFGS*FGLELL
Trigger: CAACAGCTCCAAGCCAAACAAGCTTCCGAATGGCGT...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCCTGAACAGAAATGCTaGCCACTAAGGCAGTCTCTC +
Preference number: 5 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFPEQKC*PLRQSL
Trigger: GAGAGACTGCCTTAGTGGCAAGCATTTCTGTTCAGG...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACAAAATCCACAGGCTCATaGTGTTACAGATGTCAGACT +
Preference number: 5 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTKSTGS*CYRCQT
Trigger: AGTCTGACATCTGTAACACAATGAGCCTGTGGATTT...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp ATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACAAAAACTCTCTCCCCTTaGTCAGTCTTCTTCTGTACA +
Preference number: 5 (lower is better)
Translates to: IPSPAIPPVLQETVCSKTKTLSP*SVFFCT
Trigger: TGTACAGAAGAAGACTGACAAAGGGGAGAGAGTTTT...TGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACTATCCTCTTGACTTCTaGCGTAGGTTTCTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: PSPAIPPVLQETVCSKTYYPLDF*RRFLQD
Trigger: GTCTTGAAGAAACCTACGCAAGAAGTCAAGAGGATA...GTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAAGTCAGCTCAGGGCTTTaGCAGGCAGCACACGACTTT +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQVSSGL*QAAHDF
Trigger: AAAGTCGTGTGCTGCCTGCAAAAGCCCTGAGCTGAC...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAACAGATGGTGACTCCCTaGAGAACAGGGACTGTGTCT +
Preference number: 5 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKQMVTP*RTGTVS
Trigger: AGACACAGTCCCTGTTCTCAAGGGAGTCACCATCTG...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTATCTGCTGCTTGGTTaGGGCAAACAGCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYYLLLG*GKQPSA
Trigger: TGCAGATGGCTGTTTGCCCAAACCAAGCAGCAGATA...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp AGTAGAGAAGACAATGCAGAAAGAGATAATCACCACACAAGGCAGGATGAGAGGTTTCTGACAGGATCCTaGTCTTTGATAGCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SREDNAERDNHHTRQDERFLTGS*SLIASL
Trigger: CAAGGAAGCTATCAAAGACAAGGATCCTGTCAGAAA...CCTCTCATCCTGCCTTGTGTGGTGATTATCTCTTTCTGCATTGTCTTCTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCGGGATTTTGCCTTGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHRDFAL*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACAAGGCAAAATCCCG...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAAAGACGGGATTTTGCCTaGTTGGCCAGGCTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQRRDFA*LARLVS
Trigger: TGAGACCAGCCTGGCCAACAAGGCAAAATCCCGTCT...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp GCTTGTGGCAATTACAAAGTGAAAAGTACTGTGCCAAGAACTTTGCACAAATTATCACAGTCTTCACCATaGTATTCCGTGCGACAAGCG +
Preference number: 5 (lower is better)
Translates to: ACGNYKVKSTVPRTLHKLSQSSP*YSVRQA
Trigger: CGCTTGTCGCACGGAATACAATGGTGAAGACTGTGA...TAATTTGTGCAAAGTTCTTGGCACAGTACTTTTCACTTTGTAATTGCCACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAATCTGGAGCTCCTTGTTaGGCTGGTACCTCTCATGAA +
Preference number: 5 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKSGAPC*AGTSHE
Trigger: TTCATGAGAGGTACCAGCCAAACAAGGAGCTCCAGA...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAGACAATGATGCTCTTTaGCAGTATTCTGCATTCGTA +
Preference number: 5 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKDNDAL*QYSAFV
Trigger: TACGAATGCAGAATACTGCAAAAGAGCATCATTGTC...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAATCAGGTGATTCCTCATaGACGGCTGAAGGTGGGATG +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQSGDSS*TAEGGM
Trigger: CATCCCACCTTCAGCCGTCAATGAGGAATCACCTGA...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp AGCCACTGCACCCGGCCAAGAAGAGTACACTTTATAACAGCAATAACAACAATACCTTTCCCATGGTTTTaGTTCGAACAACCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: SHCTRPRRVHFITAITTIPFPWF*FEQPLN
Trigger: GTTTAAGGGTTGTTCGAACAAAAACCATGGGAAAGG...TATTGTTGTTATTGCTGTTATAAAGTGTACTCTTCTTGGCCGGGTGCAGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TACCATTACCCCAGTATTGTGTACTATATTTTATATGACTGGCAGGCAACACAGACTGCAAATGAAGAGTaGACAGTGGCTGGGGTAGTA +
Preference number: 5 (lower is better)
Translates to: YHYPSIVYYILYDWQATQTANEE*TVAGVV
Trigger: TACTACCCCAGCCACTGTCAACTCTTCATTTGCAGT...CTGTGTTGCCTGCCAGTCATATAAAATATAGTACACAATACTGGGGTAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTATGTCAGCAATCTTTaGGTTCACCTGGTGCATGGA +
Preference number: 5 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIYVSNL*VHLVHG
Trigger: TCCATGCACCAGGTGAACCAAAAGATTGCTGACATA...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp GCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCACTTTGTCTCTTGACTTaGTCTTCTGGACTGCTGCGA +
Preference number: 5 (lower is better)
Translates to: AIPPVLQETVCSKTYISSLCLLT*SSGLLR
Trigger: TCGCAGCAGTCCAGAAGACAAAGTCAAGAGACAAAG...TGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCCTCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAAATACTGAGATTTCCTTaGTCTCTTGACTTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LSPLQLSLLFFRKLYVLKILRFP*SLDFVF
Trigger: GAAGACAAAGTCAAGAGACAAAGGAAATCTCAGTAT...TTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGAGGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTATTTCCCTGGAGAAGTaGTCTTGCAGCTCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFISLEK*SCSSFR
Trigger: TCTAAAGGAGCTGCAAGACAACTTCTCCAGGGAAAT...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAACTGCTTATCTGCTGCTaGGTTTGGGCAAACAGCCAT +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQLLICC*VWANSH
Trigger: ATGGCTGTTTGCCCAAACCAAGCAGCAGATAAGCAG...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCAAGGTCTCACTATGTaGTCCTGTTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFQGLTM*SCLVSN
Trigger: GTTTGAGACCAAACAGGACAACATAGTGAGACCTTG...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAAGGAAGCTTGTTTGGCTaGGAGCTGTTGAAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQGSLFG*ELLKLE
Trigger: TTCCAACTTCAACAGCTCCAAGCCAAACAAGCTTCC...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATGGAAGCTTGTTTGGCTaGGAGCTGTTGAAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHGSLFG*ELLKLE
Trigger: TTCCAACTTCAACAGCTCCAAGCCAAACAAGCTTCC...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAATTATTCTGGAGCTCCTaGTTTGGCTGGTACCTCTCA +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQLFWSS*FGWYLS
Trigger: TGAGAGGTACCAGCCAAACAAGGAGCTCCAGAATAA...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTAAATCCACAGGCTCATaGTGTTACAGATGTCAGACT +
Preference number: 5 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIKSTGS*CYRCQT
Trigger: AGTCTGACATCTGTAACACAATGAGCCTGTGGATTT...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTAAAACTCTCTCCCCTTaGTCAGTCTTCTTCTGTACA +
Preference number: 5 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIKTLSP*SVFFCT
Trigger: TGTACAGAAGAAGACTGACAAAGGGGAGAGAGTTTT...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCTTCCCTTAGTTTTCTaGTCAGGTGATTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFLPLVF*SGDSSL
Trigger: CAATGAGGAATCACCTGACAAGAAAACTAAGGGAAG...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp ATGGTCAATCTTGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATCAGAAGACACTGCCTTaGTATAATCCGTTTGCTATC +
Preference number: 5 (lower is better)
Translates to: MVNLVSPIPPSTFSLPYYQKTLP*YNPFAI
Trigger: GATAGCAAACGGATTATACAAAGGCAGTGTCTTCTG...ATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACAAGATTGACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAGAAAGAGGGCATATaGGAAATAGGCTGGCAATCC +
Preference number: 5 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHQKEGI*EIGWQS
Trigger: GGATTGCCAGCCTATTTCCAATATGCCCTCTTTCTG...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTGAACTTTACTATTCCTaGTCTCATGAACTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIELYYS*SHELGV
Trigger: CACTCCCAGTTCATGAGACAAGGAATAGTAAAGTTC...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TCTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTCAGGAATTAGTGATGTaGGCAGTTAACAAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: SPAIPPVLQETVCSKTYIQELVM*AVNKEE
Trigger: CTCCTCTTTGTTAACTGCCAACATCACTAATTCCTG...AATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATACTATGTTGTCCTGTTaGGTCTCAAACTCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHTMLSC*VSNSWP
Trigger: AGGCCAGGAGTTTGAGACCAAACAGGACAACATAGT...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAGGATTGTCTCTAAGTTaGCTCCCAAGTCTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKGLSLS*LPSLSD
Trigger: GTCAGAAAGACTTGGGAGCAAACTTAGAGACAATCC...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAAGATTTCCTTTGTCTCTaGACTTTGTCTTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKDFLCL*TLSSGL
Trigger: CAGTCCAGAAGACAAAGTCAAGAGACAAAGGAAATC...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATTTTGGCTTGGAGCTGTaGAAGTTGGAATACTGGTAC +
Preference number: 5 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHFGLEL*KLEYWY
Trigger: GTACCAGTATTCCAACTTCAACAGCTCCAAGCCAAA...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATTTACAGATGTCAGACTaGAATTCGTGCGTGTCGAAC +
Preference number: 5 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHLQMSD*NSCVSN
Trigger: GTTCGACACGCACGAATTCAAGTCTGACATCTGTAA...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TGTTTCACCTATACCTCCATCCACTTTCTCTCTCCCATATTATTTGAGTACAAACTTCCCTTAGTTTTCTaGTCAGGTGATTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: CFTYTSIHFLSPILFEYKLPLVF*SGDSSL
Trigger: CAATGAGGAATCACCTGACAAGAAAACTAAGGGAAG...TTTGTACTCAAATAATATGGGAGAGAGAAAGTGGATGGAGGTATAGGTGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAACTCCAATCTTGTCGTTaGTTTAATCAGCCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQLQSCR*FNQPPE
Trigger: TTCAGGAGGCTGATTAAACAAACGACAAGATTGGAG...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAACCTTTCCCATGGTTTTaGTTCGAACAACCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQPFPWF*FEQPLN
Trigger: GTTTAAGGGTTGTTCGAACAAAAACCATGGGAAAGG...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS-3UTR CAA 90 bp TCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATCAACTTTGTATAATCCGTTaGCTATCCCGAGGTGATTCA +
Preference number: 5 (lower is better)
Translates to: SLLFFRKLYVLKHTFHHQLCIIR*LSRGDS
Trigger: TGAATCACCTCGGGATAGCAAACGGATTATACAAAG...TTGATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTCCAGCTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCACTATATGGCAGGCTaGTATATTCATATCTTGACT +
Preference number: 5 (lower is better)
Translates to: LQLSLLFFRKLYVLKHTFHYMAG*YIHILT
Trigger: AGTCAAGATATGAATATACAAGCCTGCCATATAGTG...AAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAGCTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS-3UTR CAA 90 bp CTATCCCTCCTGTTCTTCAGGAAACTGTATGTTCTAAAACATACATTTCATCATAATGCTAGGAGAATATaGTATAACAGAAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: LSLLFFRKLYVLKHTFHHNARRI*YNRSPK
Trigger: CTTGGGACTTCTGTTATACAATATTCTCCTAGCATT...ATGATGAAATGTATGTTTTAGAACATACAGTTTCCTGAAGAACAGGAGGGATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS TCA 72 bp AGCCGCCGCGTTGTCCGCGAGATGCCGTTTCTATGGTaGCAGCCGGGCCGGGGGCCCAGACCAATGTGTCAG +
Preference number: 6 (lower is better)
Translates to: SRRVVREMPFLW*QPGRGPRPMCQ
Trigger: CTGACACATTGGTCTGGGCCCCCGGCCCGGCTGTCACCATAGAAACGGCATCTCGCGGACAACGCGGCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS CCA 72 bp TGCTATCCCGAGGTGATTCACGGAGTTTCTGGGGATTaGCGCAGGCTGGCGCTGGGAACCCCCGCGCCGGTT +
Preference number: 6 (lower is better)
Translates to: CYPEVIHGVSGD*RRLALGTPAPV
Trigger: AACCGGCGCGGGGGTTCCCAGCGCCAGCCTGCGCCAATCCCCAGAAACTCCGTGAATCACCTCGGGATAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS CAA 72 bp TTGCTATCCCGAGGTGATTCACGGAGTTTCTGGGGATaGGCGCAGGCTGGCGCTGGGAACCCCCGCGCCGGT +
Preference number: 6 (lower is better)
Translates to: LLSRGDSRSFWG*AQAGAGNPRAG
Trigger: ACCGGCGCGGGGGTTCCCAGCGCCAGCCTGCGCCAATCCCCAGAAACTCCGTGAATCACCTCGGGATAGCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS CAA 72 bp TTGCCACTAAGGCAGTCTCTCTCAGCCCGGACCACGTaGCCCACCATGTCACAGAAGTCCACGCCATTCGGA +
Preference number: 6 (lower is better)
Translates to: LPLRQSLSARTT*PTMSQKSTPFG
Trigger: TCCGAATGGCGTGGACTTCTGTGACATGGTGGGCAACGTGGTCCGGGCTGAGAGAGACTGCCTTAGTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000544346.5
CDS CCA 72 bp GCTGCACAGGGTCTCGCTGATGACATCAGTATACGTTaGGGTGCAGTCAGGGGTGCTCGTGGTCTTTTCCCT +
Preference number: 6 (lower is better)
Translates to: AAQGLADDISIR*GAVRGARGLFP
Trigger: AGGGAAAAGACCACGAGCACCCCTGACTGCACCCCAACGTATACTGATGTCATCAGCGAGACCCTGTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000544346.5
CDS CAA 90 bp CAGAAATGCTTGCCACTAAGGCAGTCTCTCTCAGCCCGGACCACGTaGCCCACCATGTCACAGAAGTCCACGCCATTCGGAAGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: QKCLPLRQSLSARTT*PTMSQKSTPFGSLF
Trigger: AAACAAGCTTCCGAATGGCGTGGACTTCTGTGACATGGTGGGCAACGTGGTCCGGGCTGAGAGAGACTGCCTTAGTGGCAAGCATTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000544346.5
CDS GCA 72 bp ACCATTGTATTCCGTGCGACAAGCGAGACAGCCAGGTaGTCATCCACTGGTATCATAGGTAGGGTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: TIVFRATSETAR*SSTGIIGRVVR
Trigger: CCTCACCACCCTACCTATGATACCAGTGGATGAGCACCTGGCTGTCTCGCTTGTCGCACGGAATACAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355830.11
ENST00000424706.5
ENST00000484582.1
ENST00000490082.1
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
ENST00000608409.5
CDS TCA 72 bp ACACTGCCTTTGTATAATCCGTTTGCTATCCCGAGGTaGTTCACGGAGTTTCTGGGGATTGGCGCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: TLPLYNPFAIPR*FTEFLGIGAGW
Trigger: CCAGCCTGCGCCAATCCCCAGAAACTCCGTGAATCACCTCGGGATAGCAAACGGATTATACAAAGGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS TCA 72 bp TCCACTTTCCCGTTTAGCATAACAATGGAACCTTCGTaGGCCGCCGCGTTGTCCGCGAGATGCCGTTTCTAT +
Preference number: 6 (lower is better)
Translates to: STFPFSITMEPS*AAALSARCRFY
Trigger: ATAGAAACGGCATCTCGCGGACAACGCGGCGGCTCACGAAGGTTCCATTGTTATGCTAAACGGGAAAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540952.6
CDS CAA 90 bp CCCACCATGTCACAGAAGTCCACGCCATTCGGAAGCTTGTTTGGCTaGGAGCTGTTGAAGTTGGAATACTGGTACAGCTCTGCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: PTMSQKSTPFGSLFG*ELLKLEYWYSSASR
Trigger: TCTGCTGGCAGAGCTGTACCAGTATTCCAACTTCAACAGCTCCAAGCCAAACAAGCTTCCGAATGGCGTGGACTTCTGTGACATGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
CDS CAA 90 bp ATGAGGGTGGATTGTTCTCTAACTCCTTCCTCACAGTCTTCACCATaGTATTCCGTGCGACAAGCGAGACAGCCAGGTGCTCATCCACTG +
Preference number: 6 (lower is better)
Translates to: MRVDCSLTPSSQSSP*YSVRQARQPGAHPL
Trigger: CAGTGGATGAGCACCTGGCTGTCTCGCTTGTCGCACGGAATACAATGGTGAAGACTGTGAGGAAGGAGTTAGAGAACAATCCACCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355830.11
ENST00000424706.5
ENST00000484582.1
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
ENST00000608409.5
CDS CAA 90 bp ACCACGTTGCCCACCATGTCACAGAAGTCCACGCCATTCGGAAGCTaGTTTGGCTTGGAGCTGTTGAAGTTGGAATACTGGTACAGCTCT +
Preference number: 6 (lower is better)
Translates to: TTLPTMSQKSTPFGS*FGLELLKLEYWYSS
Trigger: AGAGCTGTACCAGTATTCCAACTTCAACAGCTCCAAGCCAAACAAGCTTCCGAATGGCGTGGACTTCTGTGACATGGTGGGCAACGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
CDS CAA 90 bp AACCAGGACTGTGGAAAGCAGCAACAGAAGCTGGTGTACACGGCTTaGCTGAGAAGTGATGGCAGCCTTTTTAAGAGCGCCTCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: NQDCGKQQQKLVYTA*LRSDGSLFKSASSE
Trigger: CTCTGAAGAGGCGCTCTTAAAAAGGCTGCCATCACTTCTCAGCAAAGCCGTGTACACCAGCTTCTGTTGCTGCTTTCCACAGTCCTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000543295.1
ENST00000544346.5
CDS CAA 90 bp TACAGGGTGGATTGTTCTCTAACTCCTTCCTCACAGTCTTCACCATaGTATTCCGTGCGACAAGCGAGACAGCCAGGTGCTCATCCACTG +
Preference number: 6 (lower is better)
Translates to: YRVDCSLTPSSQSSP*YSVRQARQPGAHPL
Trigger: CAGTGGATGAGCACCTGGCTGTCTCGCTTGTCGCACGGAATACAATGGTGAAGACTGTGAGGAAGGAGTTAGAGAACAATCCACCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490082.1
CDS TCA 72 bp CCACGCCATTCGGAAGCTTGTTTGGCTTGGAGCTGTTaGAGTTGGAATACTGGTACAGCTCTGCCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: PRHSEACLAWSC*SWNTGTALPAD
Trigger: ATCTGCTGGCAGAGCTGTACCAGTATTCCAACTTCAACAGCTCCAAGCCAAACAAGCTTCCGAATGGCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
CDS TCA 72 bp CTGGCATGTCTGAGTTCGGAGCCTTTGCAGGAATACTaGGATTTCCTTTGTCTCTTGACAGGCTGTTGGCCG +
Preference number: 6 (lower is better)
Translates to: LACLSSEPLQEY*DFLCLLTGCWP
Trigger: CGGCCAACAGCCTGTCAAGAGACAAAGGAAATCTCAGTATTCCTGCAAAGGCTCCGAACTCAGACATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424706.5
CDS CCA 72 bp GTCAGACTTGAATTCGTGCGTGTCGAACCAGGACTGTaGAAAGCAGCAACAGAAGCTGGTGTACACGGCTTT +
Preference number: 6 (lower is better)
Translates to: VRLEFVRVEPGL*KAATEAGVHGF
Trigger: AAAGCCGTGTACACCAGCTTCTGTTGCTGCTTTCCACAGTCCTGGTTCGACACGCACGAATTCAAGTCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000543295.1
ENST00000544346.5
CDS CCA 72 bp AGAAGACTGAGGGTGGTAGAATTTCCTGCTCTGGGCTaGCTTCTGGGAGAAGGCTCTCTTACCAGCAAACAA +
Preference number: 6 (lower is better)
Translates to: RRLRVVEFPALG*LLGEGSLTSKQ
Trigger: TTGTTTGCTGGTAAGAGAGCCTTCTCCCAGAAGCCAGCCCAGAGCAGGAAATTCTACCACCCTCAGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
CDS CAA 72 bp CCCACCATGTCACAGAAGTCCACGCCATTCGGAAGCTaGTTTGGCTTGGAGCTGTTGAAGTTGGAATACTGG +
Preference number: 6 (lower is better)
Translates to: PTMSQKSTPFGS*FGLELLKLEYW
Trigger: CCAGTATTCCAACTTCAACAGCTCCAAGCCAAACAAGCTTCCGAATGGCGTGGACTTCTGTGACATGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
CDS TCA 72 bp GAAAGCAGCAACAGAAGCTGGTGTACACGGCTTTGCTaGGAAGTGATGGCAGCCTTTTTAAGAGCGCCTCTT +
Preference number: 6 (lower is better)
Translates to: ESSNRSWCTRLC*EVMAAFLRAPL
Trigger: AAGAGGCGCTCTTAAAAAGGCTGCCATCACTTCTCAGCAAAGCCGTGTACACCAGCTTCTGTTGCTGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000543295.1
ENST00000544346.5
CDS CCA 72 bp GACGGCTCGGTACGCAGATTTATGTCAGCAATCTTTTaGTTCACCTGGTGCATGGAGCCAATAAGGCATGAG +
Preference number: 6 (lower is better)
Translates to: DGSVRRFMSAIF*FTWCMEPIRHE
Trigger: CTCATGCCTTATTGGCTCCATGCACCAGGTGAACCAAAAGATTGCTGACATAAATCTGCGTACCGAGCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355830.11
ENST00000424706.5
ENST00000484582.1
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
ENST00000608409.5
CDS CCA 72 bp GCAGCCTTTTTAAGAGCGCCTCTTCAGAGTGGGACTTaGGTACACGAAACAAAAGTAAGGCATAGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: AAFLRAPLQSGT*VHETKVRHSAG
Trigger: CCCAGCACTATGCCTTACTTTTGTTTCGTGTACCCAAGTCCCACTCTGAAGAGGCGCTCTTAAAAAGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000543295.1
ENST00000544346.5
CDS CAA 72 bp GATTGTTCTCTAACTCCTTCCTCACAGTCTTCACCATaGTATTCCGTGCGACAAGCGAGACAGCCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: DCSLTPSSQSSP*YSVRQARQPGA
Trigger: AGCACCTGGCTGTCTCGCTTGTCGCACGGAATACAATGGTGAAGACTGTGAGGAAGGAGTTAGAGAACAATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355830.11
ENST00000424706.5
ENST00000484582.1
ENST00000490082.1
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
ENST00000608409.5
CDS CAA 72 bp TCACAGAAGTCCACGCCATTCGGAAGCTTGTTTGGCTaGGAGCTGTTGAAGTTGGAATACTGGTACAGCTCT +
Preference number: 6 (lower is better)
Translates to: SQKSTPFGSLFG*ELLKLEYWYSS
Trigger: AGAGCTGTACCAGTATTCCAACTTCAACAGCTCCAAGCCAAACAAGCTTCCGAATGGCGTGGACTTCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
CDS CAA 72 bp CGCTTCCTGGTTCTAGGTTGTGGAGCTCCTCAGGGCTaGGAAGTGAGTGGAAAGAAATGTTCAACTTCTGTT +
Preference number: 6 (lower is better)
Translates to: RFLVLGCGAPQG*EVSGKKCSTSV
Trigger: AACAGAAGTTGAACATTTCTTTCCACTCACTTCCAAGCCCTGAGGAGCTCCACAACCTAGAACCAGGAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
CDS CAA 72 bp TTCCCCTCCTTAGTTTTCTTGTCAGGTGATTCCTCATaGACGGCTGAAGGTGGGATGAACATGTGGTTTGCC +
Preference number: 6 (lower is better)
Translates to: FPSLVFLSGDSS*TAEGGMNMWFA
Trigger: GGCAAACCACATGTTCATCCCACCTTCAGCCGTCAATGAGGAATCACCTGACAAGAAAACTAAGGAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535113.7
CDS TCA 72 bp AAATCCACAGGCTCATTGTGTTACAGATGTCAGACTTaGATTCGTGCGTGTCGAACCAGGACTGTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: KSTGSLCYRCQT*IRACRTRTVES
Trigger: GCTTTCCACAGTCCTGGTTCGACACGCACGAATTCAAGTCTGACATCTGTAACACAATGAGCCTGTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000543295.1
ENST00000544346.5
CDS TCA 72 bp CTGGCATGTCTGAGTTCGGAGCCTTTGCAGGAATACTaGGATTTCCTTTGTCTCTTGACCCATGAAAAGAGC +
Preference number: 6 (lower is better)
Translates to: LACLSSEPLQEY*DFLCLLTHEKS
Trigger: GCTCTTTTCATGGGTCAAGAGACAAAGGAAATCTCAGTATTCCTGCAAAGGCTCCGAACTCAGACATGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544346.5
CDS GCA 72 bp CGCAGATTTATGTCAGCAATCTTTTGGTTCACCTGGTaGATGGAGCCAATAAGGCATGAGGGTGGATTGTTC +
Preference number: 6 (lower is better)
Translates to: RRFMSAIFWFTW*MEPIRHEGGLF
Trigger: GAACAATCCACCCTCATGCCTTATTGGCTCCATGCACCAGGTGAACCAAAAGATTGCTGACATAAATCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355830.11
ENST00000424706.5
ENST00000484582.1
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
ENST00000608409.5
CDS CCA 72 bp GTACGCAGATTTATGTCAGCAATCTTTTGGTTCACCTaGTGCATGGAGCCAATAAGGCATGAGGGTGGATTG +
Preference number: 6 (lower is better)
Translates to: VRRFMSAIFWFT*CMEPIRHEGGL
Trigger: CAATCCACCCTCATGCCTTATTGGCTCCATGCACCAGGTGAACCAAAAGATTGCTGACATAAATCTGCGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355830.11
ENST00000424706.5
ENST00000484582.1
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
ENST00000608409.5
CDS CAA 72 bp GAAATCCACAGGCTCATTGTGTTACAGATGTCAGACTaGAATTCGTGCGTGTCGAACCAGGACTGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: EIHRLIVLQMSD*NSCVSNQDCGK
Trigger: CTTTCCACAGTCCTGGTTCGACACGCACGAATTCAAGTCTGACATCTGTAACACAATGAGCCTGTGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000543295.1
ENST00000544346.5
CDS CAA 72 bp AGACTTCCCTTAGTTTTCTTGTCAGGTGATTCCTCATaGACGGCTGAAGGTGGGATGAACATGTGGTTTGCC +
Preference number: 6 (lower is better)
Translates to: RLPLVFLSGDSS*TAEGGMNMWFA
Trigger: GGCAAACCACATGTTCATCCCACCTTCAGCCGTCAATGAGGAATCACCTGACAAGAAAACTAAGGGAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS TCA 72 bp GAAAGTACACAATCAGAGGGCTCTTCCCATAAATGTTaGAGAGGTTTGAAGTCAGCTCAGGGCTTTTGCAGG +
Preference number: 6 (lower is better)
Translates to: ESTQSEGSSHKC*RGLKSAQGFCR
Trigger: CCTGCAAAAGCCCTGAGCTGACTTCAAACCTCTTCAACATTTATGGGAAGAGCCCTCTGATTGTGTACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000544346.5
CDS TCA 72 bp AATTCCATTCAGTCCAATGATGCTGGTACAACTGATTaGGGTTGTCTTTCCGCTTCTTCATGCTGCACAGGG +
Preference number: 6 (lower is better)
Translates to: NSIQSNDAGTTD*GCLSASSCCTG
Trigger: CCCTGTGCAGCATGAAGAAGCGGAAAGACAACCTCAATCAGTTGTACCAGCATCATTGGACTGAATGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000544346.5
CDS GCA 72 bp TTGTCAGTCTTCTTCTGTACAACATTAATTCTTCTCTaGGGAATCGCTCTGGGTCTAGTTCCGAGTAGTCCC +
Preference number: 6 (lower is better)
Translates to: LSVFFCTTLILL*GIALGLVPSSP
Trigger: GGGACTACTCGGAACTAGACCCAGAGCGATTCCGCAGAGAAGAATTAATGTTGTACAGAAGAAGACTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355830.11
ENST00000535113.7
ENST00000540952.6
ENST00000541689.6
ENST00000543295.1
ENST00000544346.5
CDS CAA 90 bp TTTGGTCTGATTGTAGGTGACATCACCAGAAGGATACAGGGTGGATaGTTCTCTAACTCCTTCCTCACAGTCTTCACCATTGTATTCCGT +
Preference number: 6 (lower is better)
Translates to: FGLIVGDITRRIQGG*FSNSFLTVFTIVFR
Trigger: ACGGAATACAATGGTGAAGACTGTGAGGAAGGAGTTAGAGAACAATCCACCCTGTATCCTTCTGGTGATGTCACCTACAATCAGACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490082.1
CDS CAA 72 bp TTAAGAGCCTCTCATTTCCCACTCCAATCTTGTCGTTaGTTTAATCAGCCTCCTGAAAGCATCGGCGGAATT +
Preference number: 6 (lower is better)
Translates to: LRASHFPLQSCR*FNQPPESIGGI
Trigger: AATTCCGCCGATGCTTTCAGGAGGCTGATTAAACAAACGACAAGATTGGAGTGGGAAATGAGAGGCTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355830.11
ENST00000424706.5
ENST00000484582.1
ENST00000490082.1
ENST00000535113.7
ENST00000540952.6
ENST00000544346.5
CDS CAA 72 bp AACTCAATTTCTCTTTGGAGACTTCCCTTAGTTTTCTaGTCAGGTGATTCCTCATTGACGGCTGAAGGTGGG +
Preference number: 6 (lower is better)
Translates to: NSISLWRLPLVF*SGDSSLTAEGG
Trigger: CCCACCTTCAGCCGTCAATGAGGAATCACCTGACAAGAAAACTAAGGGAAGTCTCCAAAGAGAAATTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6
CDS CAA 72 bp ATTGTAGGTGACATCACCAGAAGGATACAGGGTGGATaGTTCTCTAACTCCTTCCTCACAGTCTTCACCATT +
Preference number: 6 (lower is better)
Translates to: IVGDITRRIQGG*FSNSFLTVFTI
Trigger: AATGGTGAAGACTGTGAGGAAGGAGTTAGAGAACAATCCACCCTGTATCCTTCTGGTGATGTCACCTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490082.1
CDS TCA 72 bp ATGACTCAAGTTAGGTGTATTTGGTCTGATTGTAGGTaGCATCACCAGAAGGATACAGGGTGGATTGTTCTC +
Preference number: 6 (lower is better)
Translates to: MTQVRCIWSDCR*HHQKDTGWIVL
Trigger: GAGAACAATCCACCCTGTATCCTTCTGGTGATGTCACCTACAATCAGACCAAATACACCTAACTTGAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490082.1
CDS CCA 72 bp GCAGCAACAGACAAAAGATCCAGAAATAGGAAAGTGTaGTTCCTAGAGAAACTCGTAGCAGAAATATCACGG +
Preference number: 6 (lower is better)
Translates to: AATDKRSRNRKV*FLEKLVAEISR
Trigger: CCGTGATATTTCTGCTACGAGTTTCTCTAGGAACCACACTTTCCTATTTCTGGATCTTTTGTCTGTTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543828.1
CDS CCA 72 bp TTTTTGTTCGAACAACCCTTAAACTCAATTTCTCTTTaGAGACTTCCCTTAGTTTTCTTGTCAGGTGATTCC +
Preference number: 6 (lower is better)
Translates to: FLFEQPLNSISL*RLPLVFLSGDS
Trigger: GGAATCACCTGACAAGAAAACTAAGGGAAGTCTCCAAAGAGAAATTGAGTTTAAGGGTTGTTCGAACAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355830.11
ENST00000540952.6