Pregenerated sensors for FAM225B (Homo sapiens)
Ensembl gene IDs: ENSG00000225684Ensembl transcript IDs: ENST00000423546.1, ENST00000439875.1, ENST00000659571.1, ENST00000660977.1, ENST00000668459.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGAGAATAACAGTCCCTTACCTGCCACTTAGCAGCTGCGGCCCTTaGGCAAGTAAATCTCTTTCCTCCTCTGAGCCTCCCACTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: RRITVPYLPLSSCGP*ASKSLSSSEPPTFP Trigger: TGGGAAAGTGGGAGGCTCAGAGGAGGAAAGAGATTTACTTGCCCAAGGGCCGCAGCTGCTAAGTGGCAGGTAAGGGACTGTTATTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423546.1 ENST00000439875.1 |
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| CDS TCA 90 bp | CACCACCTCCCTCAGCATACAGTTAGCCCGTTTTCCAAACTGCCATaGTCTATTTCACAGCTCAGTTTAGTGGGGGAAGAACAGGACTGT | + |
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Preference number: 5 (lower is better) Translates to: HHLPQHTVSPFSKLP*SISQLSLVGEEQDC Trigger: ACAGTCCTGTTCTTCCCCCACTAAACTGAGCTGTGAAATAGATCATGGCAGTTTGGAAAACGGGCTAACTGTATGCTGAGGGAGGTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000423546.1 ENST00000439875.1 |
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| CDS CCA 90 bp | ATTACCTTGTCTCCACAATATACACAGAGCCACATCCAGCCACTATaGGGAAGAGTACACATGACCAACCCCACGTTCCAGAACACTGAT | + |
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Preference number: 5 (lower is better) Translates to: ITLSPQYTQSHIQPL*GRVHMTNPTFQNTD Trigger: ATCAGTGTTCTGGAACGTGGGGTTGGTCATGTGTACTCTTCCCCATAGTGGCTGGATGTGGCTCTGTGTATATTGTGGAGACAAGGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659571.1 ENST00000660977.1 ENST00000668459.1 |
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| CDS TCA 90 bp | TTTAGACTAAATGTATATCTGGCTTTATTCTTGGCCCACACTGCCTaGAGAATTAAGTACAACATTAATGTCAGTTCCTTAAGAAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: FRLNVYLALFLAHTA*RIKYNINVSSLRRV Trigger: GACCCTTCTTAAGGAACTGACATTAATGTTGTACTTAATTCTTCAGGCAGTGTGGGCCAAGAATAAAGCCAGATATACATTTAGTCTAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439875.1 |
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| CDS CCA 72 bp | GCTTGGACTCAAACCGCGGTCCGGTCCCACCCGGTCTaGTCCAGTCCCGTTGGAGGCGGCGGTTGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: AWTQTAVRSHPV*SSPVGGGGWAQ Trigger: CTGAGCCCAACCGCCGCCTCCAACGGGACTGGACCAGACCGGGTGGGACCGGACCGCGGTTTGAGTCCAAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668459.1 |
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| CDS CCA 72 bp | ACAGTCCCTTACCTGCCACTTAGCAGCTGCGGCCCTTaGGCAAGTAAATCTCTTTCCTCCTCTGAGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: TVPYLPLSSCGP*ASKSLSSSEPP Trigger: GGGAGGCTCAGAGGAGGAAAGAGATTTACTTGCCCAAGGGCCGCAGCTGCTAAGTGGCAGGTAAGGGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423546.1 ENST00000439875.1 |
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| CDS TCA 72 bp | AGAGCCACATCCAGCCACTATGGGGAAGAGTACACATaGCCAACCCCACGTTCCAGAACACTGATGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: RATSSHYGEEYT*PTPRSRTLMWM Trigger: CATCCACATCAGTGTTCTGGAACGTGGGGTTGGTCATGTGTACTCTTCCCCATAGTGGCTGGATGTGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659571.1 ENST00000660977.1 ENST00000668459.1 |
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| CDS GCA 72 bp | AGGAGAATAACAGTCCCTTACCTGCCACTTAGCAGCTaGGGCCCTTGGGCAAGTAAATCTCTTTCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RRITVPYLPLSS*GPWASKSLSSS Trigger: AGAGGAGGAAAGAGATTTACTTGCCCAAGGGCCGCAGCTGCTAAGTGGCAGGTAAGGGACTGTTATTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423546.1 ENST00000439875.1 |
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| CDS CAA 72 bp | AATGGGTCCTCACCAGGCACTGAATCCTCAGGCATCTaGATCTCGGACTTCTCAGCCTTCAGAACTTTGACG | + |
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Preference number: 6 (lower is better) Translates to: NGSSPGTESSGI*ISDFSAFRTLT Trigger: CGTCAAAGTTCTGAAGGCTGAGAAGTCCGAGATCAAGATGCCTGAGGATTCAGTGCCTGGTGAGGACCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423546.1 ENST00000439875.1 |
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| CDS CCA 72 bp | CAATGGGAATTCTACCAATGGGGTAGAATGAACAGGTaGGGCCTTTGGGAATGCCCTGAAACCAGACAGACT | + |
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Preference number: 6 (lower is better) Translates to: QWEFYQWGRMNR*GLWECPETRQT Trigger: AGTCTGTCTGGTTTCAGGGCATTCCCAAAGGCCCCACCTGTTCATTCTACCCCATTGGTAGAATTCCCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423546.1 ENST00000439875.1 |
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| CDS TCA 72 bp | CCTCAGCATACAGTTAGCCCGTTTTCCAAACTGCCATaGTCTATTTCACAGCTCAGTTTAGTGGGGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: PQHTVSPFSKLP*SISQLSLVGEE Trigger: TTCTTCCCCCACTAAACTGAGCTGTGAAATAGATCATGGCAGTTTGGAAAACGGGCTAACTGTATGCTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000423546.1 ENST00000439875.1 |
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| CDS CAA 90 bp | TTGACGCGCTATGGCCTAAATGTCAGTGTCTCCCAAATTTGTATGTaGAAGCCTAATTCCCAATGGGAATTCTACCAATGGGGTAGAATG | + |
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Preference number: 6 (lower is better) Translates to: LTRYGLNVSVSQICM*KPNSQWEFYQWGRM Trigger: CATTCTACCCCATTGGTAGAATTCCCATTGGGAATTAGGCTTCAACATACAAATTTGGGAGACACTGACATTTAGGCCATAGCGCGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423546.1 ENST00000439875.1 |
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| CDS CCA 72 bp | GTCTCCCAAATTTGTATGTTGAAGCCTAATTCCCAATaGGAATTCTACCAATGGGGTAGAATGAACAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VSQICMLKPNSQ*EFYQWGRMNRW Trigger: CCACCTGTTCATTCTACCCCATTGGTAGAATTCCCATTGGGAATTAGGCTTCAACATACAAATTTGGGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423546.1 ENST00000439875.1 |
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| CDS CAA 72 bp | TATGGCCTAAATGTCAGTGTCTCCCAAATTTGTATGTaGAAGCCTAATTCCCAATGGGAATTCTACCAATGG | + |
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Preference number: 6 (lower is better) Translates to: YGLNVSVSQICM*KPNSQWEFYQW Trigger: CCATTGGTAGAATTCCCATTGGGAATTAGGCTTCAACATACAAATTTGGGAGACACTGACATTTAGGCCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423546.1 ENST00000439875.1 |
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| CDS CCA 72 bp | AAATTGCTGTGTGTTTCCTATTTATCCCTATCTGAGTaGGGGTCTTTATCATCATTACCTTGTCTCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: KLLCVSYLSLSE*GSLSSLPCLHN Trigger: ATTGTGGAGACAAGGTAATGATGATAAAGACCCCCACTCAGATAGGGATAAATAGGAAACACACAGCAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659571.1 ENST00000660977.1 ENST00000668459.1 |
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| CDS TCA 72 bp | ATAAAAATTGCTGTGTGTTTCCTATTTATCCCTATCTaGGTGGGGGTCTTTATCATCATTACCTTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: IKIAVCFLFIPI*VGVFIIITLSP Trigger: TGGAGACAAGGTAATGATGATAAAGACCCCCACTCAGATAGGGATAAATAGGAAACACACAGCAATTTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000659571.1 ENST00000660977.1 ENST00000668459.1 |
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