Pregenerated sensors for FAM224B (Homo sapiens)
Ensembl gene IDs: ENSG00000230663Ensembl transcript IDs: ENST00000458667.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACTGAAAGAGGCACCATTTCCTCACCACCAGCAGTGATGGCGTGGTaGAGAGATCAACTCTGGGTTCTTTTCAAATATGTGGAAATCCTT | + |
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Preference number: 5 (lower is better) Translates to: TERGTISSPPAVMAW*RDQLWVLFKYVEIL Trigger: AAGGATTTCCACATATTTGAAAAGAACCCAGAGTTGATCTCTGCACCACGCCATCACTGCTGGTGGTGAGGAAATGGTGCCTCTTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS CCA 90 bp | ATCACTGAAAGAGGCACCATTTCCTCACCACCAGCAGTGATGGCGTaGTGCAGAGATCAACTCTGGGTTCTTTTCAAATATGTGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: ITERGTISSPPAVMA*CRDQLWVLFKYVEI Trigger: GATTTCCACATATTTGAAAAGAACCCAGAGTTGATCTCTGCACCACGCCATCACTGCTGGTGGTGAGGAAATGGTGCCTCTTTCAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS TCA 90 bp | AACTTCATATCACTGAAAGAGGCACCATTTCCTCACCACCAGCAGTaGTGGCGTGGTGCAGAGATCAACTCTGGGTTCTTTTCAAATATG | + |
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Preference number: 5 (lower is better) Translates to: NFISLKEAPFPHHQQ*WRGAEINSGFFSNM Trigger: CATATTTGAAAAGAACCCAGAGTTGATCTCTGCACCACGCCATCACTGCTGGTGGTGAGGAAATGGTGCCTCTTTCAGTGATATGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS TCA 90 bp | GCTAGCATTGTCACCATCCAGGAAAACATGACCTCACAAAGTGAATaGAGTAAGGCATCAGCGACAAATCCTGTAATTTCTGCTACTCGG | + |
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Preference number: 5 (lower is better) Translates to: ASIVTIQENMTSQSE*SKASATNPVISATR Trigger: CCGAGTAGCAGAAATTACAGGATTTGTCGCTGATGCCTTACTTCATTCACTTTGTGAGGTCATGTTTTCCTGGATGGTGACAATGCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS TCA 90 bp | GACACTGAAGAACATCTGCTAGCATTGTCACCATCCAGGAAAACATaGCCTCACAAAGTGAATGAAGTAAGGCATCAGCGACAAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: DTEEHLLALSPSRKT*PHKVNEVRHQRQIL Trigger: CAGGATTTGTCGCTGATGCCTTACTTCATTCACTTTGTGAGGTCATGTTTTCCTGGATGGTGACAATGCTAGCAGATGTTCTTCAGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS GCA 72 bp | AGGCAGGAGAATCGCTGGAAGCAAGGAGGTGGAGATTaGAGCCAGCCGAGACCATGCCACCGCCTTGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: RQENRWKQGGGD*SQPRPCHRLGD Trigger: GTCGCCAAGGCGGTGGCATGGTCTCGGCTGGCTGCAATCTCCACCTCCTTGCTTCCAGCGATTCTCCTGCCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS GCA 72 bp | AAGCAAGGAGGTGGAGATTGCAGCCAGCCGAGACCATaGCACCGCCTTGGCGACAGAAGGAGACACCATTTA | + |
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Preference number: 6 (lower is better) Translates to: KQGGGDCSQPRP*HRLGDRRRHHL Trigger: TAAATGGTGTCTCCTTCTGTCGCCAAGGCGGTGGCATGGTCTCGGCTGGCTGCAATCTCCACCTCCTTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS CCA 72 bp | TGGAGATTGCAGCCAGCCGAGACCATGCCACCGCCTTaGCGACAGAAGGAGACACCATTTACCTTAACAATC | + |
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Preference number: 6 (lower is better) Translates to: WRLQPAETMPPP*RQKETPFTLTI Trigger: GATTGTTAAGGTAAATGGTGTCTCCTTCTGTCGCCAAGGCGGTGGCATGGTCTCGGCTGGCTGCAATCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS TCA 72 bp | TCACTGAAAGAGGCACCATTTCCTCACCACCAGCAGTaGTGGCGTGGTGCAGAGATCAACTCTGGGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLKEAPFPHHQQ*WRGAEINSGFF Trigger: AAAGAACCCAGAGTTGATCTCTGCACCACGCCATCACTGCTGGTGGTGAGGAAATGGTGCCTCTTTCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS GCA 72 bp | GGCACCATTTCCTCACCACCAGCAGTGATGGCGTGGTaGAGAGATCAACTCTGGGTTCTTTTCAAATATGTG | + |
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Preference number: 6 (lower is better) Translates to: GTISSPPAVMAW*RDQLWVLFKYV Trigger: CACATATTTGAAAAGAACCCAGAGTTGATCTCTGCACCACGCCATCACTGCTGGTGGTGAGGAAATGGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS CCA 72 bp | CCACCAGCAGTGATGGCGTGGTGCAGAGATCAACTCTaGGTTCTTTTCAAATATGTGGAAATCCTTCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: PPAVMAWCRDQL*VLFKYVEILPK Trigger: CTTGGGAAGGATTTCCACATATTTGAAAAGAACCCAGAGTTGATCTCTGCACCACGCCATCACTGCTGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS CCA 72 bp | AGAGGCACCATTTCCTCACCACCAGCAGTGATGGCGTaGTGCAGAGATCAACTCTGGGTTCTTTTCAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: RGTISSPPAVMA*CRDQLWVLFKY Trigger: ATATTTGAAAAGAACCCAGAGTTGATCTCTGCACCACGCCATCACTGCTGGTGGTGAGGAAATGGTGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS TCA 72 bp | GAACATCTGCTAGCATTGTCACCATCCAGGAAAACATaGCCTCACAAAGTGAATGAAGTAAGGCATCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: EHLLALSPSRKT*PHKVNEVRHQR Trigger: TCGCTGATGCCTTACTTCATTCACTTTGTGAGGTCATGTTTTCCTGGATGGTGACAATGCTAGCAGATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS TCA 72 bp | GTCACCATCCAGGAAAACATGACCTCACAAAGTGAATaGAGTAAGGCATCAGCGACAAATCCTGTAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: VTIQENMTSQSE*SKASATNPVIS Trigger: AGAAATTACAGGATTTGTCGCTGATGCCTTACTTCATTCACTTTGTGAGGTCATGTTTTCCTGGATGGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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| CDS TCA 72 bp | GAACAGGGTAAGAATTCCCAGAACTTTAATGAAGACTaGTTGGTTTATAAAACTACTACAGCAAACAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: EQGKNSQNFNED*LVYKTTTANRV Trigger: TACTCTGTTTGCTGTAGTAGTTTTATAAACCAATCAGTCTTCATTAAAGTTCTGGGAATTCTTACCCTGTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458667.1 |
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