RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM221B (Homo sapiens)

Ensembl gene IDs: ENSG00000204930

Ensembl transcript IDs: ENST00000377984.2, ENST00000388950.8, ENST00000423537.7, ENST00000472182.1

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCAGGGATGGGGCCCAGTGGCTGCATGTTCTTCGTGGCTGTGTTTaGAGCGACATTGGGCCCTCCAGGCCTTGGGGTCAAAGGTGGCCC +
Preference number: 1 (lower is better)
Translates to: CRDGAQWLHVLRGCV*SDIGPSRPWGQRWP
Trigger: GGGCCACCTTTGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACATGCAGCCACTGGGCCCCATCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CCA 90 bp GGCCCAGTGGCTGCATGTTCTTCGTGGCTGTGTTTGCAGCGACATTaGGCCCTCCAGGCCTTGGGGTCAAAGGTGGCCCGTCTCTTGAGC +
Preference number: 1 (lower is better)
Translates to: GPVAACSSWLCLQRH*ALQALGSKVARLLS
Trigger: GCTCAAGAGACGGGCCACCTTTGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACATGCAGCCACTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CCA 90 bp AACAGCCGCAGCAACAGCCATGATGCCTGCAGGGATGGGGCCCAGTaGCTGCATGTTCTTCGTGGCTGTGTTTGCAGCGACATTGGGCCC +
Preference number: 1 (lower is better)
Translates to: NSRSNSHDACRDGAQ*LHVLRGCVCSDIGP
Trigger: GGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACATGCAGCCACTGGGCCCCATCCCTGCAGGCATCATGGCTGTTGCTGCGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CCA 90 bp ACAGTGTCTGTCCCGCGAGGCCTTCCTCCTCGTTGCCGGGTCTTCTaGGTGTCAAAGAAAGTCTCGTGTTCCTCCCAGCGCCGGTCACAG +
Preference number: 1 (lower is better)
Translates to: TVSVPRGLPPRCRVF*VSKKVSCSSQRRSQ
Trigger: CTGTGACCGGCGCTGGGAGGAACACGAGACTTTCTTTGACACCCAGAAGACCCGGCAACGAGGAGGAAGGCCTCGCGGGACAGACACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CCA 90 bp TCTGGGCCCCAGAGGCTGCAGTTCTCTGTGGTGCCTCTGGGACACTaGGAGACCCTAGAGTTGCCCTGGAGAAGGGCGAGAGATAAGTGG +
Preference number: 1 (lower is better)
Translates to: SGPQRLQFSVVPLGH*ETLELPWRRARDKW
Trigger: CCACTTATCTCTCGCCCTTCTCCAGGGCAACTCTAGGGTCTCCCAGTGTCCCAGAGGCACCACAGAGAACTGCAGCCTCTGGGGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR TCA 90 bp GGTGGCCCGTCTCTTGAGCCAGAACTCACCCACCTCCTCTGGGCGTaGTGGGATAAAGCAGAACATGAAGCAGCGGCACTGGCTTACCTT +
Preference number: 1 (lower is better)
Translates to: GGPSLEPELTHLLWA*WDKAEHEAAALAYL
Trigger: AAGGTAAGCCAGTGCCGCTGCTTCATGTTCTGCTTTATCCCATCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAGACGGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR GCA 90 bp GACTCCTCTTTTATTGCTGATCTGGGCCAGACTCACAAAGGCCTGTaGCAGTTGCTGACAGTGTCTGTCCCGCGAGGCCTTCCTCCTCGT +
Preference number: 1 (lower is better)
Translates to: DSSFIADLGQTHKGL*QLLTVSVPRGLPPR
Trigger: ACGAGGAGGAAGGCCTCGCGGGACAGACACTGTCAGCAACTGGCACAGGCCTTTGTGAGTCTGGCCCAGATCAGCAATAAAAGAGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CCA 90 bp TCCTCTGGGCGTGATGGGATAAAGCAGAACATGAAGCAGCGGCACTaGCTTACCTTGCAGGGCACCGATATGTCTGAGATGATCCGGTGC +
Preference number: 1 (lower is better)
Translates to: SSGRDGIKQNMKQRH*LTLQGTDMSEMIRC
Trigger: GCACCGGATCATCTCAGACATATCGGTGCCCTGCAAGGTAAGCCAGTGCCGCTGCTTCATGTTCTGCTTTATCCCATCACGCCCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CCA 90 bp CTCCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTaGCCTTATCTCCTACTTCACAGGGCATATAGAAGCCATCAGAGG +
Preference number: 1 (lower is better)
Translates to: LLLPTLIPLPLDPSH*PYLLLHRAYRSHQR
Trigger: CCTCTGATGGCTTCTATATGCCCTGTGAAGTAGGAGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 90 bp GCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTaGTACTGTACCTCATTAGAGACTTCTCTTCCTTTGACTGCTCCC +
Preference number: 1 (lower is better)
Translates to: ASEHCLLYSNPCPYV*YCTSLETSLPLTAP
Trigger: GGGAGCAGTCAAAGGAAGAGAAGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR TCA 90 bp ACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTaGACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTA +
Preference number: 1 (lower is better)
Translates to: TFTCPHLKDVMLCSL*TLSLVLQPLPLRLL
Trigger: TAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CCA 90 bp CCATCTCTGGGATCTTGTCTCACCAGGCATCTCTTCTCTCTCTTCTaGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTC +
Preference number: 1 (lower is better)
Translates to: PSLGSCLTRHLFSLF*VLQGPLVYWPLPLF
Trigger: GAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTGGTGAGACAAGATCCCAGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 90 bp TTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTaGCCCTACGTCTGCTACTGTACCTCATTAGAGACTTCTCTTCCT +
Preference number: 1 (lower is better)
Translates to: LCSAASEHCLLYSNP*PYVCYCTSLETSLP
Trigger: AGGAAGAGAAGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CCA 90 bp CTAATAGGTGTCAACTCTAAGTTATTAGGCAGTCTCTCCCTGGGCTaGGATCTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGAC +
Preference number: 1 (lower is better)
Translates to: LIGVNSKLLGSLSLG*DLPAPYRAKSGSND
Trigger: GTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACTGCCTAATAACTTAGAGTTGACACCTATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CCA 90 bp CTTTCCTTCAACAGGCAGCTTGAATGTGAGTGTGATGGAGGCAGATaGCCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCT +
Preference number: 1 (lower is better)
Translates to: LSFNRQLECECDGGR*PDPGFLLCLIGVNS
Trigger: AGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGGCCATCTGCCTCCATCACACTCACATTCAAGCTGCCTGTTGAAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR TCA 90 bp TTCATCCAAGCTTCTTTAAGAGACTCCTTGAAACTCACTGCTGTTTaGCTCCTGCCTCCACTGCACCAGTGTGAAACTGCACTCTCCGAT +
Preference number: 1 (lower is better)
Translates to: FIQASLRDSLKLTAV*LLPPLHQCETALSD
Trigger: ATCGGAGAGTGCAGTTTCACACTGGTGCAGTGGAGGCAGGAGTCAAACAGCAGTGAGTTTCAAGGAGTCTCTTAAAGAAGCTTGGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 90 bp ATAGGAAGTGGTGTTTCTCCTGTCCAGAGAAAATCCCTTCACCTCTaGTTTGACCTCATCCCTTTCCTCCATCTCTGGGATCTTGTCTCA +
Preference number: 1 (lower is better)
Translates to: IGSGVSPVQRKSLHL*FDLIPFLHLWDLVS
Trigger: TGAGACAAGATCCCAGAGATGGAGGAAAGGGATGAGGTCAAAGCAGAGGTGAAGGGATTTTCTCTGGACAGGAGAAACACCACTTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR TCA 90 bp AGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTaGCTTCCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTC +
Preference number: 1 (lower is better)
Translates to: SAGISYSHKNLWTPL*LPTFTDFDPWPTVF
Trigger: GAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGGAAGTCACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CCA 90 bp TCTCTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTaGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACA +
Preference number: 1 (lower is better)
Translates to: SLPLTAPFFNLSFAS*HHFLSLLVLYAPFT
Trigger: TGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 90 bp CTACGTCTGCTACTGTACCTCATTAGAGACTTCTCTTCCTTTGACTaGTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTCT +
Preference number: 1 (lower is better)
Translates to: LRLLLYLIRDFSSFD*SLFQSVICLLASLS
Trigger: AGAAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAGAGAAGTCTCTAATGAGGTACAGTAGCAGACGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CAA 90 bp GGGCCCAGTGGCTGCATGTTCTTCGTGGCTGTGTTTGCAGCGACATaGGGCCCTCCAGGCCTTGGGGTCAAAGGTGGCCCGTCTCTTGAG +
Preference number: 2 (lower is better)
Translates to: GPSGCMFFVAVFAAT*GPPGLGVKGGPSLE
Trigger: CTCAAGAGACGGGCCACCTTTGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACATGCAGCCACTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CAA 90 bp CGACATTGGGCCCTCCAGGCCTTGGGGTCAAAGGTGGCCCGTCTCTaGAGCCAGAACTCACCCACCTCCTCTGGGCGTGATGGGATAAAG +
Preference number: 2 (lower is better)
Translates to: RHWALQALGSKVARL*SQNSPTSSGRDGIK
Trigger: CTTTATCCCATCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAGACGGGCCACCTTTGACCCCAAGGCCTGGAGGGCCCAATGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CAA 90 bp TGTTCTTCGTGGCTGTGTTTGCAGCGACATTGGGCCCTCCAGGCCTaGGGGTCAAAGGTGGCCCGTCTCTTGAGCCAGAACTCACCCACC +
Preference number: 2 (lower is better)
Translates to: CSSWLCLQRHWALQA*GSKVARLLSQNSPT
Trigger: GGTGGGTGAGTTCTGGCTCAAGAGACGGGCCACCTTTGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CAA 90 bp CTGCAGTTCTCTGTGGTGCCTCTGGGACACTGGGAGACCCTAGAGTaGCCCTGGAGAAGGGCGAGAGATAAGTGGATCTGGGATCTAGGA +
Preference number: 2 (lower is better)
Translates to: LQFSVVPLGHWETLE*PWRRARDKWIWDLG
Trigger: TCCTAGATCCCAGATCCACTTATCTCTCGCCCTTCTCCAGGGCAACTCTAGGGTCTCCCAGTGTCCCAGAGGCACCACAGAGAACTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CCA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTCTGGACCCCAGCCATTaGCCTTATCTCCTACTTCAC +
Preference number: 2 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSLDPSH*PYLLLH
Trigger: GTGAAGTAGGAGATAAGGCCAATGGCTGGGGTCCAG...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR TCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCAGGTGGCCCGTCTCTTaGGCCAGAACTCACCCACCT +
Preference number: 2 (lower is better)
Translates to: GITFFPYWCCMLPSHPHARWPVS*ARTHPP
Trigger: AGGTGGGTGAGTTCTGGCTCAAGAGACGGGCCACCT...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR GCA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTACTCACAAAGGCCTGTaGCAGTTGCTGACAGTGTCT +
Preference number: 2 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSTHKGL*QLLTVS
Trigger: AGACACTGTCAGCAACTGGCACAGGCCTTTGTGAGT...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR TCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTCCGCAGCAACAGCCATaGTGCCTGCAGGGATGGGGC +
Preference number: 2 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFPQQQP*CLQGWG
Trigger: GCCCCATCCCTGCAGGCATCATGGCTGTTGCTGCGG...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR TCA 90 bp TTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCGCCTGTGCCAGTTGCTaGCAGTGTCTGTCCCGCGAG +
Preference number: 2 (lower is better)
Translates to: FFPYWCCMLPSHPHAFFCACASC*QCLSRE
Trigger: CTCGCGGGACAGACACTGTCAGCAACTGGCACAGGC...GCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR GCA 90 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGACTCCTGCCTCCACTaGACCAGTGTGAAACTGCAC +
Preference number: 2 (lower is better)
Translates to: HCLLYSNPCPYVCYCTSLDSCLH*TSVKLH
Trigger: GTGCAGTTTCACACTGGTGCAGTGGAGGCAGGAGTC...TAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR GCA 90 bp GAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTATGGGGCCCAGTGGCTaGATGTTCTTCGTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: ERCYALQPLNTVSCTPTPMGPSG*MFFVAV
Trigger: CACAGCCACGAAGAACATGCAGCCACTGGGCCCCAT...AGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR GCA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGGCCTTCCTCCTCGTTaGCGGGTCTTCTGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIAGLPPR*RVFWVS
Trigger: TGACACCCAGAAGACCCGGCAACGAGGAGGAAGGCC...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR GCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCGACTCCTGCCTCCACTaGACCAGTGTGAAACTGCAC +
Preference number: 2 (lower is better)
Translates to: GITFFPYWCCMLPSHPHADSCLH*TSVKLH
Trigger: GTGCAGTTTCACACTGGTGCAGTGGAGGCAGGAGTC...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CCA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCCGTTGCCGGGTCTTCTaGGTGTCAAAGAAAGTCTCG +
Preference number: 2 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSRCRVF*VSKKVS
Trigger: CGAGACTTTCTTTGACACCCAGAAGACCCGGCAACG...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CAA 90 bp CCTGTTTTACAGGTCCAGAAACTCAGCCTAAAGAGGGACAGTGACTaGCCTGGGTTCACAGAGCCCATTAGTGCTGGAATCTCCTACTCC +
Preference number: 2 (lower is better)
Translates to: PVLQVQKLSLKRDSD*PGFTEPISAGISYS
Trigger: GGAGTAGGAGATTCCAGCACTAATGGGCTCTGTGAACCCAGGCAAGTCACTGTCCCTCTTTAGGCTGAGTTTCTGGACCTGTAAAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR TCA 90 bp GGGACAGTGACTTGCCTGGGTTCACAGAGCCCATTAGTGCTGGAATCTCCTACTCTCCTCTTTTATTGCTaGTCTGGGCCAGACTCACAA +
Preference number: 2 (lower is better)
Translates to: GTVTCLGSQSPLVLESPTLLFYC*SGPDSQ
Trigger: TTGTGAGTCTGGCCCAGATCAGCAATAAAAGAGGAG...AGTAGGAGATTCCAGCACTAATGGGCTCTGTGAACCCAGGCAAGTCACTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR GCA 90 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTACTCCTTGAAACTCACTaGTGTTTGACTCCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: HCLLYSNPCPYVCYCTSLLLETH*CLTPAS
Trigger: GGAGGCAGGAGTCAAACAGCAGTGAGTTTCAAGGAG...TAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CCA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTAGGGATGGGGCCCAGTaGCTGCATGTTCTTCGTGGC +
Preference number: 2 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTRDGAQ*LHVLRG
Trigger: GCCACGAAGAACATGCAGCCACTGGGCCCCATCCCT...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR GCA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGGCACTGGCTTACCTTaGAGGGCACCGATATGTCTG +
Preference number: 2 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIAGTGLP*RAPICL
Trigger: CAGACATATCGGTGCCCTGCAAGGTAAGCCAGTGCC...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR CCA 90 bp AGATGGCCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCTAAGTTAATGAAGCAGCGGCACTaGCTTACCTTGCAGGGCACC +
Preference number: 2 (lower is better)
Translates to: RWPDPGFLLCLIGVNSKLMKQRH*LTLQGT
Trigger: GGTGCCCTGCAAGGTAAGCCAGTGCCGCTGCTTCAT...TAACTTAGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR CCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCGCTGCATGTTCTTCGTaGCTGTGTTTGCAGCGACAT +
Preference number: 2 (lower is better)
Translates to: GITFFPYWCCMLPSHPHAAACSS*LCLQRH
Trigger: ATGTCGCTGCAAACACAGCCACGAAGAACATGCAGC...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR GCA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATAAACAGCCATGATGCCTaGAGGGATGGGGCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEINSHDA*RDGAQW
Trigger: CCACTGGGCCCCATCCCTGCAGGCATCATGGCTGTT...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR CCA 90 bp TTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTTAGTTTTCCTAGTCTCTCCCTGGGCTaGGATCTACCTGCCCCATAT +
Preference number: 2 (lower is better)
Translates to: LVLYAPFTSSCLLLLSFPSLSLG*DLPAPY
Trigger: ATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACT...AGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CCA 90 bp TTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGACTTCTGTGATGGAGGCAGATaGCCAGATCCAGGCTTTCTC +
Preference number: 2 (lower is better)
Translates to: LVLESPTPIRTYGLPCDFCDGGR*PDPGFL
Trigger: GAGAAAGCCTGGATCTGGCCATCTGCCTCCATCACA...GAAGTCACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CCA 90 bp CACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTCCTTTCCTCCATCTCTaGGATCTTGTCTCACCAGGC +
Preference number: 2 (lower is better)
Translates to: HFLSLLVLYAPFTSSCLLPFLHL*DLVSPG
Trigger: GCCTGGTGAGACAAGATCCCAGAGATGGAGGAAAGG...AAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR TCA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTCACCTCCTCTGGGCGTaGTGGGATAAAGCAGAACAT +
Preference number: 2 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTHLLWA*WDKAEH
Trigger: ATGTTCTGCTTTATCCCATCACGCCCAGAGGAGGTG...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR TCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTCCTTCACCTCTGCTTTaGCCTCATCCCTTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFPSPLL*PHPFPP
Trigger: TGGAGGAAAGGGATGAGGTCAAAGCAGAGGTGAAGG...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR GCA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACCTTCGTGGCTGTGTTTaGAGCGACATTGGGCCCTCC +
Preference number: 2 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHLRGCV*SDIGPS
Trigger: GGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAG...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR GCA 90 bp TTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGACTTCCTCCTTGAAACTCACTaGTGTTTGACTCCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: LVLESPTPIRTYGLPCDFLLETH*CLTPAS
Trigger: GGAGGCAGGAGTCAAACAGCAGTGAGTTTCAAGGAG...GAAGTCACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR GCA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTTCTCTTCTTGTCTCCTaGTCCCTACTCTTATCCCTC +
Preference number: 2 (lower is better)
Translates to: HLHLPSSERCYALQPLNTSLLVS*SLLLSL
Trigger: GAGGGATAAGAGTAGGGAGCAGGAGACAAGAAGAGA...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR GCA 90 bp CACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTCCTATTGGTGCTGTATaGTCCCTTCACATCCTCATG +
Preference number: 2 (lower is better)
Translates to: HLPSSERCYALQPLNTVSPIGAV*SLHILM
Trigger: CATGAGGATGTGAAGGGAGCATACAGCACCAATAGG...AGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CAA 90 bp TTGGTGCCCCAACTGCATCTAACATCACTTCCCACTCTATCCTTCTaGAAACTTCCTCCCTTCTTGACTTCCTTGAAGCCACTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: LVPQLHLTSLPTLSF*KLPPFLTSLKPLSF
Trigger: GAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGGAGGAAGTTTCAAGAAGGATAGAGTGGGAAGTGATGTTAGATGCAGTTGGGGCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR GCA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATATTGTACTCCAACCCCTaGCCCTACGTCTGCTACTGT +
Preference number: 2 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEILYSNP*PYVCYC
Trigger: ACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAA...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CCA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACGGTCCTTTAGTCTACTaGCCTCTTCCCCTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHGPLVY*PLPLFL
Trigger: AAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACC...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR GCA 90 bp GAAGCCAGTCTGGAGGATAGGTGGATACAAAGCACTTTGAAATTAGTTATTTCTTCTCTTCTTGTCTCCTaGTCCCTACTCTTATCCCTC +
Preference number: 2 (lower is better)
Translates to: EASLEDRWIQSTLKLVISSLLVS*SLLLSL
Trigger: GAGGGATAAGAGTAGGGAGCAGGAGACAAGAAGAGA...AGAAATAACTAATTTCAAAGTGCTTTGTATCCACCTATCCTCCAGACTGGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CCA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACCTCTTCTCTCTCTTCTaGGTCCTTCAAGGTCCTTTA +
Preference number: 2 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHLFSLF*VLQGPL
Trigger: TAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAG...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CCA 90 bp GAAGCCAGTCTGGAGGATAGGTGGATACAAAGCACTTTGAAATTAGTTATTTCTCTGTCATTTGCCTCCTaGCATCACTTTCTTTCCCTA +
Preference number: 2 (lower is better)
Translates to: EASLEDRWIQSTLKLVISLSFAS*HHFLSL
Trigger: TAGGGAAAGAAAGTGATGCCAGGAGGCAAATGACAG...AGAAATAACTAATTTCAAAGTGCTTTGTATCCACCTATCCTCCAGACTGGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CAA 90 bp CTGGAGGATAGGTGGATACAAAGCACTTTGAAATTAGTTATTTCTTaGGTTCTCATAGAAAGTAGGCAACACAGAGGTTATTCCTGTTTT +
Preference number: 2 (lower is better)
Translates to: LEDRWIQSTLKLVIS*VLIESRQHRGYSCF
Trigger: AAAACAGGAATAACCTCTGTGTTGCCTACTTTCTATGAGAACCAAAGAAATAACTAATTTCAAAGTGCTTTGTATCCACCTATCCTCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR GCA 90 bp GAAGCCAGTCTGGAGGATAGGTGGATACAAAGCACTTTGAAATTAGTTATTTCTCAAAGATCTTCTAATTaGAAAACCCAATGGACACTT +
Preference number: 2 (lower is better)
Translates to: EASLEDRWIQSTLKLVISQRSSN*KTQWTL
Trigger: AAGTGTCCATTGGGTTTTGCAATTAGAAGATCTTTG...AGAAATAACTAATTTCAAAGTGCTTTGTATCCACCTATCCTCCAGACTGGCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 72 bp GGGGCCCAGTGGCTGCATGTTCTTCGTGGCTGTGTTTaGAGCGACATTGGGCCCTCCAGGCCTTGGGGTCAA +
Preference number: 3 (lower is better)
Translates to: GAQWLHVLRGCV*SDIGPSRPWGQ
Trigger: TTGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACATGCAGCCACTGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR CCA 72 bp GTCCCGCGAGGCCTTCCTCCTCGTTGCCGGGTCTTCTaGGTGTCAAAGAAAGTCTCGTGTTCCTCCCAGCGC +
Preference number: 3 (lower is better)
Translates to: VPRGLPPRCRVF*VSKKVSCSSQR
Trigger: GCGCTGGGAGGAACACGAGACTTTCTTTGACACCCAGAAGACCCGGCAACGAGGAGGAAGGCCTCGCGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR GCA 72 bp CTGACAGTGTCTGTCCCGCGAGGCCTTCCTCCTCGTTaGCGGGTCTTCTGGGTGTCAAAGAAAGTCTCGTGT +
Preference number: 3 (lower is better)
Translates to: LTVSVPRGLPPR*RVFWVSKKVSC
Trigger: ACACGAGACTTTCTTTGACACCCAGAAGACCCGGCAACGAGGAGGAAGGCCTCGCGGGACAGACACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR CAA 90 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAAGGCCTTCCTCCTCGTaGCCGGGTCTTCTGGGTGTC +
Preference number: 3 (lower is better)
Translates to: HCLLYSNPCPYVCYCTSLRPSSS*PGLLGV
Trigger: GACACCCAGAAGACCCGGCAACGAGGAGGAAGGCCT...TAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR CAA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCGTGTTTGCAGCGACATaGGGCCCTCCAGGCCTTGGG +
Preference number: 3 (lower is better)
Translates to: GITFFPYWCCMLPSHPHAVFAAT*GPPGLG
Trigger: CCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACAC...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR GCA 72 bp TTTATTGCTGATCTGGGCCAGACTCACAAAGGCCTGTaGCAGTTGCTGACAGTGTCTGTCCCGCGAGGCCTT +
Preference number: 3 (lower is better)
Translates to: FIADLGQTHKGL*QLLTVSVPRGL
Trigger: AAGGCCTCGCGGGACAGACACTGTCAGCAACTGGCACAGGCCTTTGTGAGTCTGGCCCAGATCAGCAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR CAA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTCCCACTCTATCCTTCTaGAAACTTCCTCCCTTCTTG +
Preference number: 3 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSPTLSF*KLPPFL
Trigger: CAAGAAGGGAGGAAGTTTCAAGAAGGATAGAGTGGG...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTTCCTCTTCCTTCGTCTaGGTCATAGGAAGTGGTGTT +
Preference number: 3 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSSSSFV*VIGSGV
Trigger: AACACCACTTCCTATGACCAAGACGAAGGAAGAGGA...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR TCA 72 bp GCCATCAGAGGGGAACTTCCACAGGTTCTTGTTCCCTaGAACTCTAGGAAGGCTCCATCCTCTTCCTTCGTC +
Preference number: 3 (lower is better)
Translates to: AIRGELPQVLVP*NSRKAPSSSFV
Trigger: GACGAAGGAAGAGGATGGAGCCTTCCTAGAGTTTCAGGGAACAAGAACCTGTGGAAGTTCCCCTCTGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 72 bp GCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTaGCCCTACGTCTGCTACTGTACCTCATTAGAGACT +
Preference number: 3 (lower is better)
Translates to: AASEHCLLYSNP*PYVCYCTSLET
Trigger: AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTAACTTCCACAGGTTCTaGTTCCCTGAAACTCTAGGA +
Preference number: 3 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSNFHRF*FPETLG
Trigger: TCCTAGAGTTTCAGGGAACAAGAACCTGTGGAAGTT...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp GGGACAGTGACTTGCCTGGGTTCACAGAGCCCATTAGTGCTGGAATCTCCTACTCCCTTCTTGACTTCCTaGAAGCCACTTTCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: GTVTCLGSQSPLVLESPTPFLTS*KPLSFN
Trigger: GTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG...AGTAGGAGATTCCAGCACTAATGGGCTCTGTGAACCCAGGCAAGTCACTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR TCA 72 bp CACTGCTGTTTGACTCCTGCCTCCACTGCACCAGTGTaGAACTGCACTCTCCGATGTTCCCAAAGATCTTCT +
Preference number: 3 (lower is better)
Translates to: HCCLTPASTAPV*NCTLRCSQRSS
Trigger: AGAAGATCTTTGGGAACATCGGAGAGTGCAGTTTCACACTGGTGCAGTGGAGGCAGGAGTCAAACAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CCA 72 bp GTCAACTCTAAGTTATTAGGCAGTCTCTCCCTGGGCTaGGATCTACCTGCCCCATATAGAGCCAAGTCAGGT +
Preference number: 3 (lower is better)
Translates to: VNSKLLGSLSLG*DLPAPYRAKSG
Trigger: ACCTGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACTGCCTAATAACTTAGAGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp CCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCTAAGTTATTAGGCCGGCACTGGCTTACCTaGCAGGGCACCGATATGTCT +
Preference number: 3 (lower is better)
Translates to: PDPGFLLCLIGVNSKLLGRHWLT*QGTDMS
Trigger: AGACATATCGGTGCCCTGCAAGGTAAGCCAGTGCCG...GCCTAATAACTTAGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR CAA 90 bp CCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCTAAGTTATTAGGCAAAGGCCTGTGCCAGTaGCTGACAGTGTCTGTCCCG +
Preference number: 3 (lower is better)
Translates to: PDPGFLLCLIGVNSKLLGKGLCQ*LTVSVP
Trigger: CGGGACAGACACTGTCAGCAACTGGCACAGGCCTTT...GCCTAATAACTTAGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR CAA 90 bp CCTTTCTCCTCTAAAGGGCAGACATTTGATTCTGTGATTTTCCCCAGGGATCCTTCTGAACACTGTCTCTaGTACTCCAACCCCTGCCCC +
Preference number: 3 (lower is better)
Translates to: PFSSKGQTFDSVIFPRDPSEHCL*YSNPCP
Trigger: GGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGA...AGGATCCCTGGGGAAAATCACAGAATCAAATGTCTGCCCTTTAGAGGAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 72 bp GGTGTTTCTCCTGTCCAGAGAAAATCCCTTCACCTCTaGTTTGACCTCATCCCTTTCCTCCATCTCTGGGAT +
Preference number: 3 (lower is better)
Translates to: GVSPVQRKSLHL*FDLIPFLHLWD
Trigger: ATCCCAGAGATGGAGGAAAGGGATGAGGTCAAAGCAGAGGTGAAGGGATTTTCTCTGGACAGGAGAAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 72 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTaGTACTGTACCTCATTAGAGACTTCTCTTCCTTTG +
Preference number: 3 (lower is better)
Translates to: HCLLYSNPCPYV*YCTSLETSLPL
Trigger: CAAAGGAAGAGAAGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CCA 72 bp AACAGGCAGCTTGAATGTGAGTGTGATGGAGGCAGATaGCCAGATCCAGGCTTTCTCCTGTGTCTAATAGGT +
Preference number: 3 (lower is better)
Translates to: NRQLECECDGGR*PDPGFLLCLIG
Trigger: ACCTATTAGACACAGGAGAAAGCCTGGATCTGGCCATCTGCCTCCATCACACTCACATTCAAGCTGCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CCA 72 bp GGATCTTGTCTCACCAGGCATCTCTTCTCTCTCTTCTaGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTT +
Preference number: 3 (lower is better)
Translates to: GSCLTRHLFSLF*VLQGPLVYWPL
Trigger: AAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTGGTGAGACAAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CCA 72 bp GGCTCCATCCTCTTCCTTCGTCTTGGTCATAGGAAGTaGTGTTTCTCCTGTCCAGAGAAAATCCCTTCACCT +
Preference number: 3 (lower is better)
Translates to: GSILFLRLGHRK*CFSCPEKIPSP
Trigger: AGGTGAAGGGATTTTCTCTGGACAGGAGAAACACCACTTCCTATGACCAAGACGAAGGAAGAGGATGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp GAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTCCTTCAACAGGCAGCTaGAATGTGAGTGTGATGGAG +
Preference number: 3 (lower is better)
Translates to: ERCYALQPLNTVSCTPTPPSTGS*NVSVME
Trigger: CTCCATCACACTCACATTCAAGCTGCCTGTTGAAGG...AGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTACAAAAGTACTTCCTaGACTCCACAACTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: QASLLSLLGPSRSFSLLAYKSTS*TPQLPL
Trigger: CAGAGGGAGTTGTGGAGTCAAGGAAGTACTTTTGTA...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 72 bp TGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTaGTTAGTTTTCCTGATCTTCCTCCCTGACACCCTC +
Preference number: 3 (lower is better)
Translates to: CCMLPSHPHAFF*LVFLIFLPDTL
Trigger: GAGGGTGTCAGGGAGGAAGATCAGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATATCTTCGTGGCTGTGTTaGCAGCGACATTGGGCCCTC +
Preference number: 3 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEISSWLC*QRHWAL
Trigger: GAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGA...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR CAA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTGAAACTCACTGCTGTTaGACTCCTGCCTCCACTGCA +
Preference number: 3 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFETHCC*TPASTA
Trigger: TGCAGTGGAGGCAGGAGTCAAACAGCAGTGAGTTTC...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTACAAAAGTACTTCCTaGACTCCACAACTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: GITFFPYWCCMLPSHPHAYKSTS*TPQLPL
Trigger: CAGAGGGAGTTGTGGAGTCAAGGAAGTACTTTTGTA...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp TTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTCCATCTCTGGGATCTaGTCTCACCAGGCATCTCTT +
Preference number: 3 (lower is better)
Translates to: FFPYWCCMLPSHPHAFFCSISGI*SHQASL
Trigger: AAGAGATGCCTGGTGAGACAAGATCCCAGAGATGGA...GCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTTCCTCTTCCTTCGTCTaGGTCATAGGAAGTGGTGTT +
Preference number: 3 (lower is better)
Translates to: HLHLPSSERCYALQPLNTSSSFV*VIGSGV
Trigger: AACACCACTTCCTATGACCAAGACGAAGGAAGAGGA...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTTCTCTTCCTTaGACTGCTCCCTTTTTCAAT +
Preference number: 3 (lower is better)
Translates to: HCLLYSNPCPYVCYCTSLETSLP*TAPFFN
Trigger: ATTGAAAAAGGGAGCAGTCAAAGGAAGAGAAGTCTC...TAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTCCTTCAACAGGCAGCTaGAATGTGAGTGTGATGGAG +
Preference number: 3 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTPSTGS*NVSVME
Trigger: CTCCATCACACTCACATTCAAGCTGCCTGTTGAAGG...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTATCCTCATGCCTTCTTTaGCTTAGTTTTCCTGATCTT +
Preference number: 3 (lower is better)
Translates to: HCLLYSNPCPYVCYCTSLSSCLL*LSFPDL
Trigger: AAGATCAGGAAAACTAAGCAAAAGAAGGCATGAGGA...TAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp TTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGACTTCCACTTTCTTTCCCTATaGGTGCTGTATGCTCCCTTC +
Preference number: 3 (lower is better)
Translates to: LVLESPTPIRTYGLPCDFHFLSL*VLYAPF
Trigger: GAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG...GAAGTCACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR TCA 72 bp ATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTaGCTTCCCACATTCACTGATTTTGATCCTTGGCCC +
Preference number: 3 (lower is better)
Translates to: ISYSHKNLWTPL*LPTFTDFDPWP
Trigger: GGGCCAAGGATCAAAATCAGTGAATGTGGGAAGTCACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 72 bp TCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATaGCTTCTTTTGCTTAGTTTTCCTGATCTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: SLLVLYAPFTSS*LLLLSFPDLPP
Trigger: GGGAGGAAGATCAGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTCCCTTCTTGACTTCCTaGAAGCCACTTTCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTPFLTS*KPLSFN
Trigger: GTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACGAAACTCACTGCTGTTaGACTCCTGCCTCCACTGCA +
Preference number: 3 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHETHCC*TPASTA
Trigger: TGCAGTGGAGGCAGGAGTCAAACAGCAGTGAGTTTC...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR TCA 72 bp ATCCTTTCTCCTCTAAAGGGCAGACATTTGATTCTGTaGTTTTCCCCAGGGATCCTAGCAGTCCAGATTGCA +
Preference number: 3 (lower is better)
Translates to: ILSPLKGRHLIL*FSPGILAVQIA
Trigger: TGCAATCTGGACTGCTAGGATCCCTGGGGAAAATCACAGAATCAAATGTCTGCCCTTTAGAGGAGAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp TTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGACTTCACTTATCACCTTCACTaGCCCTCATCTGAAAGATGT +
Preference number: 3 (lower is better)
Translates to: LVLESPTPIRTYGLPCDFTYHLH*PSSERC
Trigger: ACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAGT...GAAGTCACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR TCA 72 bp TACTTCAAGCACTTATCACCTTCACTTGCCCTCATCTaGAAGATGTTATGCTCTGCAGCCTCTGAACACTGT +
Preference number: 3 (lower is better)
Translates to: YFKHLSPSLALI*KMLCSAASEHC
Trigger: ACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAGTGCTTGAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR GCA 72 bp TCTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTaGCTCCTGGCATCACTTTCTTTCCCTATTGGTGCT +
Preference number: 3 (lower is better)
Translates to: SSFDCSLFQSVI*LLASLSFPIGA
Trigger: AGCACCAATAGGGAAAGAAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CCA 72 bp TTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTaGCATCACTTTCTTTCCCTATTGGTGCTGTATGCT +
Preference number: 3 (lower is better)
Translates to: LTAPFFNLSFAS*HHFLSLLVLYA
Trigger: AGCATACAGCACCAATAGGGAAAGAAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACATGACTCCTCTTTTATaGCTGATCTGGGCCAGACTC +
Preference number: 3 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHMTPLL*LIWARL
Trigger: GAGTCTGGCCCAGATCAGCAATAAAAGAGGAGTCAT...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388950.8
3UTR-3UTR CAA 90 bp TTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGACTTCAACTCCCTCTGGATATaGTCTGACTTTACTTTTGTA +
Preference number: 3 (lower is better)
Translates to: LVLESPTPIRTYGLPCDFNSLWI*SDFTFV
Trigger: TACAAAAGTAAAGTCAGACAATATCCAGAGGGAGTT...GAAGTCACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACAACTTCCACAGGTTCTaGTTCCCTGAAACTCTAGGA +
Preference number: 3 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHNFHRF*FPETLG
Trigger: TCCTAGAGTTTCAGGGAACAAGAACCTGTGGAAGTT...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CCA 72 bp TCTAGGAAGAGGAAGGAAGCCAGTCTGGAGGATAGGTaGATACAAAGCACTTTGAAATTAGTTATTTCTTTG +
Preference number: 3 (lower is better)
Translates to: SRKRKEASLEDR*IQSTLKLVISL
Trigger: CAAAGAAATAACTAATTTCAAAGTGCTTTGTATCCACCTATCCTCCAGACTGGCTTCCTTCCTCTTCCTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR-3UTR CAA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACAACTCCCTCTGGATATaGTCTGACTTTACTTTTGTA +
Preference number: 3 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHNSLWI*SDFTFV
Trigger: TACAAAAGTAAAGTCAGACAATATCCAGAGGGAGTT...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR TCA 72 bp ACTTCCTTGACTCCACAACTCCCTCTGGATATTGTCTaGCTTTACTTTTGTACTTTTCATCCAAGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: TSLTPQLPLDIV*LYFCTFHPSFF
Trigger: AAAGAAGCTTGGATGAAAAGTACAAAAGTAAAGTCAGACAATATCCAGAGGGAGTTGTGGAGTCAAGGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp GTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCAGGTTCCACTGGGCCCCAGAGGCTaGAGTTCTCTGTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VSPWAGIYLPHIEPSQVPLGPRG*SSLWCL
Trigger: GAGGCACCACAGAGAACTGCAGCCTCTGGGGCCCAG...TGGAACCTGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CAA 72 bp GCTGACAGTGTCTGTCCCGCGAGGCCTTCCTCCTCGTaGCCGGGTCTTCTGGGTGTCAAAGAAAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: ADSVCPARPSSS*PGLLGVKESLV
Trigger: CACGAGACTTTCTTTGACACCCAGAAGACCCGGCAACGAGGAGGAAGGCCTCGCGGGACAGACACTGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR TCA 90 bp TTAGGCAGTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCAGGCAGGGGGAGGTGTTaGTCCTCAGGGAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LGSLSLGWDLPAPYRAKSGRGRC*SSGRKG
Trigger: GCCTTTCCTCCCTGAGGATCAACACCTCCCCCTGCC...TGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACTGCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTGGCCTTATCTCCAGGTTGGGCTGTGTaGGCAGTGCTGTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: PAPYSYPSSPGPQPLALSPGWAV*AVLSLA
Trigger: TGCCAGTGACAGCACTGCTCACACAGCCCAACCTGG...AGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp TTAGGCAGTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCAAGGTGGCCCGTCTCTTaGGCCAGAACTCACCCACCT +
Preference number: 4 (lower is better)
Translates to: LGSLSLGWDLPAPYRAKSRWPVS*ARTHPP
Trigger: AGGTGGGTGAGTTCTGGCTCAAGAGACGGGCCACCT...TGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACTGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTACCGCAGCAACAGCCATaGTGCCTGCAGGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: HCLLYSNPCPYVCYCTSLPQQQP*CLQGWG
Trigger: GCCCCATCCCTGCAGGCATCATGGCTGTTGCTGCGG...TAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTCCGCAGCAACAGCCATaGTGCCTGCAGGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETPQQQP*CLQGWG
Trigger: GCCCCATCCCTGCAGGCATCATGGCTGTTGCTGCGG...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTAGGCAGTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCAAGGGATGGGGCCCAGTaGCTGCATGTTCTTCGTGGC +
Preference number: 4 (lower is better)
Translates to: LGSLSLGWDLPAPYRAKSRDGAQ*LHVLRG
Trigger: GCCACGAAGAACATGCAGCCACTGGGCCCCATCCCT...TGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACTGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGAGATGGAAGGCTCCTaGTGGGTTTCAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSEMEGS*WVSGEW
Trigger: CCATTCCCCTGAAACCCATCAGGAGCCTTCCATCTC...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCGCCTGTGCCAGTTGCTaGCAGTGTCTGTCCCGCGAG +
Preference number: 4 (lower is better)
Translates to: QASLLSLLGPSRSFSLLAACASC*QCLSRE
Trigger: CTCGCGGGACAGACACTGTCAGCAACTGGCACAGGC...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTGCCTGTGCCAGTTGCTaGCAGTGTCTGTCCCGCGAG +
Preference number: 4 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETACASC*QCLSRE
Trigger: CTCGCGGGACAGACACTGTCAGCAACTGGCACAGGC...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTCTTGAGCCAGAACTCACCCACCTCCTCTGGGCGTGATGGGATAAAGCAGAACTCCACCAGCTCTGTCTaGCTAGCAGGGAACACTGGG +
Preference number: 4 (lower is better)
Translates to: LLSQNSPTSSGRDGIKQNSTSSV*LAGNTG
Trigger: CCCAGTGTTCCCTGCTAGGCAGACAGAGCTGGTGGA...GTTCTGCTTTATCCCATCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR GCA 90 bp TGTTCTTCGTGGCTGTGTTTGCAGCGACATTGGGCCCTCCAGGCCTTGGGGTCATTGTACTCCAACCCCTaGCCCTACGTCTGCTACTGT +
Preference number: 4 (lower is better)
Translates to: CSSWLCLQRHWALQALGSLYSNP*PYVCYC
Trigger: ACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAA...TGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR GCA 90 bp GAGGAAATTAGACTCAAAACAGCCGCAGCAACAGCCATGATGCCTGCAGGGATGCTGGGCCCCAGAGGCTaGAGTTCTCTGTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: EEIRLKTAAATAMMPAGMLGPRG*SSLWCL
Trigger: GAGGCACCACAGAGAACTGCAGCCTCTGGGGCCCAG...CATCCCTGCAGGCATCATGGCTGTTGCTGCGGCTGTTTTGAGTCTAATTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CCA 90 bp CCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTGGCCTTATCTGGGAGGAAAGGCTCTTaGTTGTGGATGTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PAPYSYPSSPGPQPLALSGRKGS*LWMCLS
Trigger: GCTGAGGCACATCCACAACCAAGAGCCTTTCCTCCC...AGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTGGCCTTATCTTGGGTTTCAGGGGAATaGGCCTCTAAGGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PAPYSYPSSPGPQPLALSWVSGE*ASKGIW
Trigger: CCAGATCCCCTTAGAGGCCCATTCCCCTGAAACCCA...AGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTGGCCTTATCTTCGGTTGTGTCCACTTaGACCTGGGATGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PAPYSYPSSPGPQPLALSSVVST*TWDEGP
Trigger: AGGCCCTTCATCCCAGGTCCAAGTGGACACAACCGA...AGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTTTCGCAAAGGAGCTCTaGCATGACCTGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSFAKEL*HDLGKW
Trigger: CCACTTCCCCAGGTCATGCCAGAGCTCCTTTGCGAA...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAAGTCTCTCCCTGGGCTaGGATCTACCTGCCCCATAT +
Preference number: 4 (lower is better)
Translates to: VSPWAGIYLPHIEPSQVPSLSLG*DLPAPY
Trigger: ATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACT...TGGAACCTGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp GTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCAGGTTCCACCTTCACCTCTGCTTTaGCCTCATCCCTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VSPWAGIYLPHIEPSQVPPSPLL*PHPFPP
Trigger: TGGAGGAAAGGGATGAGGTCAAAGCAGAGGTGAAGG...TGGAACCTGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTCTTGAGCCAGAACTCACCCACCTCCTCTGGGCGTGATGGGATAAAGCAGAACGGCACTGGCTTACCTTaGAGGGCACCGATATGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSQNSPTSSGRDGIKQNGTGLP*RAPICL
Trigger: CAGACATATCGGTGCCCTGCAAGGTAAGCCAGTGCC...GTTCTGCTTTATCCCATCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR GCA 90 bp TGTTCTTCGTGGCTGTGTTTGCAGCGACATTGGGCCCTCCAGGCCTTGGGGTCAGGGGACTTGGATATCTaGAGAACTTCGCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: CSSWLCLQRHWALQALGSGDLDI*RTSQRS
Trigger: GCTCCTTTGCGAAGTTCTGCAGATATCCAAGTCCCC...TGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR GCA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCAACAGCCATGATGCCTaGAGGGATGGGGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSNSHDA*RDGAQW
Trigger: CCACTGGGCCCCATCCCTGCAGGCATCATGGCTGTT...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp TGTTCTTCGTGGCTGTGTTTGCAGCGACATTGGGCCCTCCAGGCCTTGGGGTCAACTCACAAAGGCCTGTaGCAGTTGCTGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: CSSWLCLQRHWALQALGSTHKGL*QLLTVS
Trigger: AGACACTGTCAGCAACTGGCACAGGCCTTTGTGAGT...TGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR GCA 90 bp CTCTTGAGCCAGAACTCACCCACCTCCTCTGGGCGTGATGGGATAAAGCAGAACTGCAGTTCTCTGTGGTaGCTCTGGGACACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLSQNSPTSSGRDGIKQNCSSLW*LWDTGR
Trigger: TCTCCCAGTGTCCCAGAGGCACCACAGAGAACTGCA...GTTCTGCTTTATCCCATCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CCA 90 bp TGTTCTTCGTGGCTGTGTTTGCAGCGACATTGGGCCCTCCAGGCCTTGGGGTCAACGGGGTCTCAGAGGTaGAAGGCTTCAAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: CSSWLCLQRHWALQALGSTGSQR*KASRSF
Trigger: AAAGCTTCTTGAAGCCTTCCACCTCTGAGACCCCGT...TGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CCA 90 bp CCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTGGCCTTATCTAAAGGCTCTTGGTTGTaGATGTGCCTCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PAPYSYPSSPGPQPLALSKGSWL*MCLSCR
Trigger: CCTGCAGCTGAGGCACATCCACAACCAAGAGCCTTT...AGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTGGCCTTATCTCGTTGCCGGGTCTTCTaGGTGTCAAAGAAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: PAPYSYPSSPGPQPLALSRCRVF*VSKKVS
Trigger: CGAGACTTTCTTTGACACCCAGAAGACCCGGCAACG...AGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCAGGTTCCACTGGACCCCAGCCATTaGCCTTATCTCCTACTTCAC +
Preference number: 4 (lower is better)
Translates to: VSPWAGIYLPHIEPSQVPLDPSH*PYLLLH
Trigger: GTGAAGTAGGAGATAAGGCCAATGGCTGGGGTCCAG...TGGAACCTGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTCTTGAGCCAGAACTCACCCACCTCCTCTGGGCGTGATGGGATAAAGCAGAACTTATCCCTCTTCCCCTaGACCCCAGCCATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLSQNSPTSSGRDGIKQNLSLFP*TPAIGL
Trigger: AAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAA...GTTCTGCTTTATCCCATCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR TCA 90 bp GTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCAGGTTCCACAGGTTCTTGTTCCCTaGAACTCTAGGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSPWAGIYLPHIEPSQVPQVLVP*NSRKAP
Trigger: TGGAGCCTTCCTAGAGTTTCAGGGAACAAGAACCTG...TGGAACCTGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCATGGGGCCCAGTGGCTaGATGTTCTTCGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSMGPSG*MFFVAV
Trigger: CACAGCCACGAAGAACATGCAGCCACTGGGCCCCAT...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCGGCCTTCCTCCTCGTTaGCGGGTCTTCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GITFFPYWCCMLPSHPHAGLPPR*RVFWVS
Trigger: TGACACCCAGAAGACCCGGCAACGAGGAGGAAGGCC...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTTCTCACTTCCAACTGTaGCCGAATCCTGAACTACCC +
Preference number: 4 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSSHFQL*PNPELP
Trigger: GGGTAGTTCAGGATTCGGGCACAGTTGGAAGTGAGA...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GGGACAGTGACTTGCCTGGGTTCACAGAGCCCATTAGTGCTGGAATCTCCTACTGGGGATTCAGAGGTATaGGGCTCTAACGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GTVTCLGSQSPLVLESPTGDSEV*GSNGVS
Trigger: TGAGACCCCGTTAGAGCCCCATACCTCTGAATCCCC...AGTAGGAGATTCCAGCACTAATGGGCTCTGTGAACCCAGGCAAGTCACTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAATGAAGCAGCGGCACTaGCTTACCTTGCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: HCLLYSNPCPYVCYCTSLMKQRH*LTLQGT
Trigger: GGTGCCCTGCAAGGTAAGCCAGTGCCGCTGCTTCAT...TAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTGCATGTTCTTCGTaGCTGTGTTTGCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSAACSS*LCLQRH
Trigger: ATGTCGCTGCAAACACAGCCACGAAGAACATGCAGC...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTAGGCAGTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCAACCCTAGAGTTGCCCTaGAGAAGGGCGAGAGATAAG +
Preference number: 4 (lower is better)
Translates to: LGSLSLGWDLPAPYRAKSTLELP*RRARDK
Trigger: CTTATCTCTCGCCCTTCTCCAGGGCAACTCTAGGGT...TGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACTGCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CCTTTCTCCTCTAAAGGGCAGACATTTGATTCTGTGATTTTCCCCAGGGATCCTGGCAGGGGGAGGTGTTaGTCCTCAGGGAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PFSSKGQTFDSVIFPRDPGRGRC*SSGRKG
Trigger: GCCTTTCCTCCCTGAGGATCAACACCTCCCCCTGCC...AGGATCCCTGGGGAAAATCACAGAATCAAATGTCTGCCCTTTAGAGGAGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTGAGATGGAAGGCTCCTaGTGGGTTTCAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETEMEGS*WVSGEW
Trigger: CCATTCCCCTGAAACCCATCAGGAGCCTTCCATCTC...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTCTTGAGCCAGAACTCACCCACCTCCTCTGGGCGTGATGGGATAAAGCAGAACCCGATATGTCTGAGATaGTCCGGTGCTCTCTCAACA +
Preference number: 4 (lower is better)
Translates to: LLSQNSPTSSGRDGIKQNPICLR*SGALST
Trigger: TGTTGAGAGAGCACCGGATCATCTCAGACATATCGG...GTTCTGCTTTATCCCATCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR TCA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTCTATGGACTCCCTTGTaGCTTCCCACATTCACTGAT +
Preference number: 4 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSLWTPL*LPTFTD
Trigger: ATCAGTGAATGTGGGAAGTCACAAGGGAGTCCATAG...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp GAGGAAATTAGACTCAAAACAGCCGCAGCAACAGCCATGATGCCTGCAGGGATGAGAGGGACAGTGACTTaGCTGGGTTCACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: EEIRLKTAAATAMMPAGMRGTVT*LGSQSP
Trigger: TGGGCTCTGTGAACCCAGGCAAGTCACTGTCCCTCT...CATCCCTGCAGGCATCATGGCTGTTGCTGCGGCTGTTTTGAGTCTAATTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CCA 90 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGCCTCTAAGGGGATCTaGGAAGGGGATGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: HCLLYSNPCPYVCYCTSLASKGI*EGDGTK
Trigger: TTTGGTGCCATCCCCTTCCCAGATCCCCTTAGAGGC...TAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTATGGGTTTCAGGGGAATaGGCCTCTAAGGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: HCLLYSNPCPYVCYCTSLWVSGE*ASKGIW
Trigger: CCAGATCCCCTTAGAGGCCCATTCCCCTGAAACCCA...TAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTAGACCTCCTTGTCCATaGGACCTCATTGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSRPPCP*DLIGRR
Trigger: TCTTCTTCCAATGAGGTCCCATGGACAAGGAGGTCT...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTCATGACCTGGGGAAGTaGGTAGGGACAAGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETHDLGK*VGTRGL
Trigger: TAGACCCCTTGTCCCTACCCACTTCCCCAGGTCATG...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCAGTCTCTCCCTGGGCTaGGATCTACCTGCCCCATAT +
Preference number: 4 (lower is better)
Translates to: QASLLSLLGPSRSFSLLASLSLG*DLPAPY
Trigger: ATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACT...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CAA 72 bp CAGGTCCAGAAACTCAGCCTAAAGAGGGACAGTGACTaGCCTGGGTTCACAGAGCCCATTAGTGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: QVQKLSLKRDSD*PGFTEPISAGI
Trigger: GATTCCAGCACTAATGGGCTCTGTGAACCCAGGCAAGTCACTGTCCCTCTTTAGGCTGAGTTTCTGGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCAAACTCACTGCTGTTTaGCTCCTGCCTCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSKLTAV*LLPPLH
Trigger: GTGCAGTGGAGGCAGGAGTCAAACAGCAGTGAGTTT...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCCCTTCACCTCTGCTTTaGCCTCATCCCTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSPSPLL*PHPFPP
Trigger: TGGAGGAAAGGGATGAGGTCAAAGCAGAGGTGAAGG...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTGATGGCATTCAGGGCTaGATCCTTCTCCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: LLSLLGPSRSFSLLASSPDGIQG*ILLPLE
Trigger: TTCCAGTGGGAGAAGGATGCAGCCCTGAATGCCATC...AGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTCTTCGTGGCTGTGTTTaGAGCGACATTGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HLHLPSSERCYALQPLNTLRGCV*SDIGPS
Trigger: GGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAG...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTAACAGCCATGATGCCTaGAGGGATGGGGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: HFLSLLVLYAPFTSSCLLNSHDA*RDGAQW
Trigger: CCACTGGGCCCCATCCCTGCAGGCATCATGGCTGTT...AAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp GGGACAGTGACTTGCCTGGGTTCACAGAGCCCATTAGTGCTGGAATCTCCTACTCTCCTTGAAACTCACTaGTGTTTGACTCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GTVTCLGSQSPLVLESPTLLETH*CLTPAS
Trigger: GGAGGCAGGAGTCAAACAGCAGTGAGTTTCAAGGAG...AGTAGGAGATTCCAGCACTAATGGGCTCTGTGAACCCAGGCAAGTCACTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCCCCTGCCCCTACGTCTaGTACTGTACCTCATTAGAG +
Preference number: 4 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSPCPYV*YCTSLE
Trigger: CTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGG...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTGACCTTGACTTAGGATaGCAGGGGGAGGTGTTGATC +
Preference number: 4 (lower is better)
Translates to: LLSLLGPSRSFSLLASSPDLDLG*QGEVLI
Trigger: GATCAACACCTCCCCCTGCCATCCTAAGTCAAGGTC...AGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCGGGGATTCAGAGGTATaGGGCTCTAACGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GITFFPYWCCMLPSHPHAGDSEV*GSNGVS
Trigger: TGAGACCCCGTTAGAGCCCCATACCTCTGAATCCCC...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTAGGCAGTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCATCCATGGGACCTCATTaGAAGAAGACTCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGSLSLGWDLPAPYRAKSSMGPH*KKTQRR
Trigger: TCTCCTCTGAGTCTTCTTCCAATGAGGTCCCATGGA...TGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACTGCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GGGACAGTGACTTGCCTGGGTTCACAGAGCCCATTAGTGCTGGAATCTCCTACTTCTGGGAAGGGGACTTaGATATCTGCAGAACTTCGC +
Preference number: 4 (lower is better)
Translates to: GTVTCLGSQSPLVLESPTSGKGT*ISAELR
Trigger: GCGAAGTTCTGCAGATATCCAAGTCCCCTTCCCAGA...AGTAGGAGATTCCAGCACTAATGGGCTCTGTGAACCCAGGCAAGTCACTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTTGTTTGCAGCGACATTaGGCCCTCCAGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIACLQRH*ALQALG
Trigger: CCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACA...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTGTTTGCAGCGACATTaGGCCCTCCAGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FFPYWCCMLPSHPHAFFCCLQRH*ALQALG
Trigger: CCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACA...GCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGATCTGGGCCAGAGGGATGGGGCCCAGTaGCTGCATGTTCTTCGTGGC +
Preference number: 4 (lower is better)
Translates to: YRAKSGSNDSSFIADLGQRDGAQ*LHVLRG
Trigger: GCCACGAAGAACATGCAGCCACTGGGCCCCATCCCT...CTGGCCCAGATCAGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCACCCTAGAGTTGCCCTaGAGAAGGGCGAGAGATAAG +
Preference number: 4 (lower is better)
Translates to: QASLLSLLGPSRSFSLLATLELP*RRARDK
Trigger: CTTATCTCTCGCCCTTCTCCAGGGCAACTCTAGGGT...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGAATGGCCTCTTCTCTaGGCCCCAGAGGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: ERCYALQPLNTVSCTPTPEWPLL*APEAAV
Trigger: AACTGCAGCCTCTGGGGCCCAGAGAAGAGGCCATTC...AGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCCTTAGGTCAAGACCTTaGCTTAGGATGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: GITFFPYWCCMLPSHPHALRSRP*LRMAGG
Trigger: TCCCCCTGCCATCCTAAGTCAAGGTCTTGACCTAAG...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCGATGGGACTATCCAATaGAGCCTCATAGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: QASLLSLLGPSRSFSLLADGTIQ*SLIGRG
Trigger: ACCCCTACCTATGAGGCTTCATTGGATAGTCCCATC...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTCCAGGTTGGGCTGTGTaGGCAGTGCTGTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTPGWAV*AVLSLA
Trigger: TGCCAGTGACAGCACTGCTCACACAGCCCAACCTGG...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTGGGCTGTGTGAGCAGTaGTGTCACTGGCATCTACTC +
Preference number: 4 (lower is better)
Translates to: HLPSSERCYALQPLNTVSGLCEQ*CHWHLL
Trigger: GAGTAGATGCCAGTGACAGCACTGCTCACACAGCCC...AGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCCTCCTCTCTATGCATTaGCTTAGCCACTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: QASLLSLLGPSRSFSLLALLSMH*LSHFHQ
Trigger: CTGGTGGAAGTGGCTAAGGCAATGCATAGAGAGGAG...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp GGGACAGTGACTTGCCTGGGTTCACAGAGCCCATTAGTGCTGGAATCTCCTACTCCAAACTCCTCTCTATaGATTGCCTTAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: GTVTCLGSQSPLVLESPTPNSSL*IALATS
Trigger: GGAAGTGGCTAAGGCAATGCATAGAGAGGAGTTTGG...AGTAGGAGATTCCAGCACTAATGGGCTCTGTGAACCCAGGCAAGTCACTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTGGCCTTATCTTTCTATGATCTCATGTaGTTCCATCCTCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PAPYSYPSSPGPQPLALSFYDLM*FHPLGF
Trigger: AAAGCCCAGAGGATGGAAGCACATGAGATCATAGAA...AGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp TTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTATAGGCAGTCACAATaGAGGTGGGCGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FFPYWCCMLPSHPHAFFCYRQSQ*RWAGAR
Trigger: CCTGGCTCCCGCCCACCTGCATTGTGACTGCCTATA...GCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR GCA 90 bp CAAGCACTTATCACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTTCGTGGCTGTGTTTaGAGCGACATTGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QALITFTCPHLKDVMLCSLRGCV*SDIGPS
Trigger: GGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAG...GCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAGTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp ATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGATCTGGGCCAGAATGGGGCCCAGTGGCTaGATGTTCTTCGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IEPSQVPMTPLLLLIWARMGPSG*MFFVAV
Trigger: CACAGCCACGAAGAACATGCAGCCACTGGGCCCCAT...TCTGGCCCAGATCAGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTGGCCTTCCTCCTCGTTaGCGGGTCTTCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFGLPPR*RVFWVS
Trigger: TGACACCCAGAAGACCCGGCAACGAGGAGGAAGGCC...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTACTCACAAAGGCCTGTaGCAGTTGCTGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLSLLGPSRSFSLLASSPTHKGL*QLLTVS
Trigger: AGACACTGTCAGCAACTGGCACAGGCCTTTGTGAGT...AGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp AGCCCATTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGACTCCTGCCTCCACTaGACCAGTGTGAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: SPLVLESPTPIRTYGLPCDSCLH*TSVKLH
Trigger: GTGCAGTTTCACACTGGTGCAGTGGAGGCAGGAGTC...ACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCGATCTGGGAAGGGGATaGCACCAAAGGGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: GITFFPYWCCMLPSHPHADLGRG*HQRGFR
Trigger: TCTGAATCCCCTTTGGTGCCATCCCCTTCCCAGATC...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CCCTTCTTGACTTCCTTGAAGCCACTTTCCTTCAACAGGCAGCTTGAATGTGAGGCCTCTAAGGGGATCTaGGAAGGGGATGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: PFLTSLKPLSFNRQLECEASKGI*EGDGTK
Trigger: TTTGGTGCCATCCCCTTCCCAGATCCCCTTAGAGGC...CTCACATTCAAGCTGCCTGTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CCCTTCTTGACTTCCTTGAAGCCACTTTCCTTCAACAGGCAGCTTGAATGTGAGTCGGTTGTGTCCACTTaGACCTGGGATGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PFLTSLKPLSFNRQLECESVVST*TWDEGP
Trigger: AGGCCCTTCATCCCAGGTCCAAGTGGACACAACCGA...CTCACATTCAAGCTGCCTGTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCAGAGACCTGTCTGGATaGCATTCAGGGCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: GITFFPYWCCMLPSHPHARDLSG*HSGLHP
Trigger: AGGATGCAGCCCTGAATGCCATCCAGACAGGTCTCT...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423537.7
CDS-3UTR CCA 90 bp AGCCCATTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTCATGACCTGGGGAAGTaGGTAGGGACAAGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: SPLVLESPTPIRTYGLPCHDLGK*VGTRGL
Trigger: TAGACCCCTTGTCCCTACCCACTTCCCCAGGTCATG...ACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAATGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCCCATCCTCTGGGCTTTaGCTTGGTTGTTACAAGTCC +
Preference number: 4 (lower is better)
Translates to: QASLLSLLGPSRSFSLLAPSSGL*LGCYKS
Trigger: GGACTTGTAACAACCAAGCCAAAGCCCAGAGGATGG...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCCCTTTCCTCCATCTCTaGGATCTTGTCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GITFFPYWCCMLPSHPHAPFLHL*DLVSPG
Trigger: GCCTGGTGAGACAAGATCCCAGAGATGGAGGAAAGG...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTAGGCAGTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCACTGTCATTTGCCTCCTaGCATCACTTTCTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LGSLSLGWDLPAPYRAKSLSFAS*HHFLSL
Trigger: TAGGGAAAGAAAGTGATGCCAGGAGGCAAATGACAG...TGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACTGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CAA 72 bp AAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTaGTACTCCAACCCCTGCCCCTACGTCTGCTACTGT +
Preference number: 4 (lower is better)
Translates to: KMLCSAASEHCL*YSNPCPYVCYC
Trigger: ACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTCTTAGGTCAAGACCTTaGCTTAGGATGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: HLPSSERCYALQPLNTVSLRSRP*LRMAGG
Trigger: TCCCCCTGCCATCCTAAGTCAAGGTCTTGACCTAAG...AGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CCCTTCTTGACTTCCTTGAAGCCACTTTCCTTCAACAGGCAGCTTGAATGTGAGCACCTCCTCTGGGCGTaGTGGGATAAAGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: PFLTSLKPLSFNRQLECEHLLWA*WDKAEH
Trigger: ATGTTCTGCTTTATCCCATCACGCCCAGAGGAGGTG...CTCACATTCAAGCTGCCTGTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTCTCCTCTTTTATTGCTaGTCTGGGCCAGACTCACAA +
Preference number: 4 (lower is better)
Translates to: LLSLLGPSRSFSLLASSPLLFYC*SGPDSQ
Trigger: TTGTGAGTCTGGCCCAGATCAGCAATAAAAGAGGAG...AGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCCTCCTCTTTTATTGCTaGTCTGGGCCAGACTCACAA +
Preference number: 4 (lower is better)
Translates to: QASLLSLLGPSRSFSLLALLFYC*SGPDSQ
Trigger: TTGTGAGTCTGGCCCAGATCAGCAATAAAAGAGGAG...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCCAGGTTCTTGTTCCCTaGAACTCTAGGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GITFFPYWCCMLPSHPHAQVLVP*NSRKAP
Trigger: TGGAGCCTTCCTAGAGTTTCAGGGAACAAGAACCTG...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCCTATGGACTCCCTTGTaGCTTCCCACATTCACTGAT +
Preference number: 4 (lower is better)
Translates to: QASLLSLLGPSRSFSLLALWTPL*LPTFTD
Trigger: ATCAGTGAATGTGGGAAGTCACAAGGGAGTCCATAG...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCCCTGCTTCTTCCTCCTaGTTTTCGGTTGTGTCCACT +
Preference number: 4 (lower is better)
Translates to: GITFFPYWCCMLPSHPHAPASSS*FSVVST
Trigger: AGTGGACACAACCGAAAAGCAGGAGGAAGAAGCAGG...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTCCAAACTCCTCTCTATaGATTGCCTTAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETPNSSL*IALATS
Trigger: GGAAGTGGCTAAGGCAATGCATAGAGAGGAGTTTGG...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTGATGGCATTCAGGGCTaGATCCTTCTCCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: HLHLPSSERCYALQPLNTDGIQG*ILLPLE
Trigger: TTCCAGTGGGAGAAGGATGCAGCCCTGAATGCCATC...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTGACTCCTGCCTCCACTaGACCAGTGTGAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: HFLSLLVLYAPFTSSCLLDSCLH*TSVKLH
Trigger: GTGCAGTTTCACACTGGTGCAGTGGAGGCAGGAGTC...AAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTCTCTTCTTGTCTCCTaGTCCCTACTCTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: LLSLLGPSRSFSLLASSPSLLVS*SLLLSL
Trigger: GAGGGATAAGAGTAGGGAGCAGGAGACAAGAAGAGA...AGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp AGCCCATTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTCCCTGCCCCTACGTCTaGTACTGTACCTCATTAGAG +
Preference number: 4 (lower is better)
Translates to: SPLVLESPTPIRTYGLPCPCPYV*YCTSLE
Trigger: CTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGG...ACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAATGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp AGCCCATTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGATCTGGGAAGGGGATaGCACCAAAGGGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: SPLVLESPTPIRTYGLPCDLGRG*HQRGFR
Trigger: TCTGAATCCCCTTTGGTGCCATCCCCTTCCCAGATC...ACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAATGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTAAAGGCTCTTGGTTGTaGATGTGCCTCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HLHLPSSERCYALQPLNTKGSWL*MCLSCR
Trigger: CCTGCAGCTGAGGCACATCCACAACCAAGAGCCTTT...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCCTTTTATTGCTGATCTaGGCCAGACTCACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSLLLLI*ARLTKA
Trigger: GGCCTTTGTGAGTCTGGCCCAGATCAGCAATAAAAG...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTTGTGATGGAGGCAGATaGCCAGATCCAGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: HLHLPSSERCYALQPLNTCDGGR*PDPGFL
Trigger: GAGAAAGCCTGGATCTGGCCATCTGCCTCCATCACA...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CCCTTCTTGACTTCCTTGAAGCCACTTTCCTTCAACAGGCAGCTTGAATGTGAGTGTGATGGAGGCAGATaGCCAGATCCAGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PFLTSLKPLSFNRQLECECDGGR*PDPGFL
Trigger: GAGAAAGCCTGGATCTGGCCATCTGCCTCCATCACA...CTCACATTCAAGCTGCCTGTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTTATCCCTCTTCCCCTaGACCCCAGCCATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FFPYWCCMLPSHPHAFFCLSLFP*TPAIGL
Trigger: AAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAA...GCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GAGGAAATTAGACTCAAAACAGCCGCAGCAACAGCCATGATGCCTGCAGGGATGGGAAGGAAGCCAGTCTaGAGGATAGGTGGATACAAA +
Preference number: 4 (lower is better)
Translates to: EEIRLKTAAATAMMPAGMGRKPV*RIGGYK
Trigger: TTTGTATCCACCTATCCTCCAGACTGGCTTCCTTCC...CATCCCTGCAGGCATCATGGCTGTTGCTGCGGCTGTTTTGAGTCTAATTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CCA 90 bp TTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTTAGTTTTCCTGAATGGCCTCTTCTCTaGGCCCCAGAGGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LVLYAPFTSSCLLLLSFPEWPLL*APEAAV
Trigger: AACTGCAGCCTCTGGGGCCCAGAGAAGAGGCCATTC...AGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCGCATCCATGGTGATATaGGGCTCTTCTATGATCTCA +
Preference number: 4 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSASMVI*GSSMIS
Trigger: TGAGATCATAGAAGAGCCTCATATCACCATGGATGC...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp GAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTCCGATATGTCTGAGATaGTCCGGTGCTCTCTCAACA +
Preference number: 4 (lower is better)
Translates to: ERCYALQPLNTVSCTPTPPICLR*SGALST
Trigger: TGTTGAGAGAGCACCGGATCATCTCAGACATATCGG...AGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTGAAATGCCTTGCCTaGAAGTCTGCTATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLSLLGPSRSFSLLASSPLKCLA*KSAIWE
Trigger: TTCCCAGATAGCAGACTTTCAGGCAAGGCATTTCAA...AGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp GAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCAGGTGCTGAGTGTTaGAATGCCTTGCCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: ERCYALQPLNTVSCTPTPAGAEC*NALPES
Trigger: ACTTTCAGGCAAGGCATTTCAACACTCAGCACCTGC...AGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTCTCAGCTGCAGGTGCTaGGTGTTGAAATGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFLSCRC*VLKCLA
Trigger: GGCAAGGCATTTCAACACTCAGCACCTGCAGCTGAG...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTCTCAGCTGCAGGTGCTaGGTGTTGAAATGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTLSCRC*VLKCLA
Trigger: GGCAAGGCATTTCAACACTCAGCACCTGCAGCTGAG...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp AGATGGCCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCTAAGTTAGGGCTGTGTGAGCAGTaGTGTCACTGGCATCTACTC +
Preference number: 4 (lower is better)
Translates to: RWPDPGFLLCLIGVNSKLGLCEQ*CHWHLL
Trigger: GAGTAGATGCCAGTGACAGCACTGCTCACACAGCCC...TAACTTAGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGGCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTGGCACTGGCTTACCTTaGAGGGCACCGATATGTCTG +
Preference number: 4 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFGTGLP*RAPICL
Trigger: CAGACATATCGGTGCCCTGCAAGGTAAGCCAGTGCC...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp AGCCCATTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTCCTTGCCTGAAAGTCTaGTATCTGGGAAGGGGACTT +
Preference number: 4 (lower is better)
Translates to: SPLVLESPTPIRTYGLPCPCLKV*YLGRGL
Trigger: AAGTCCCCTTCCCAGATAGCAGACTTTCAGGCAAGG...ACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAATGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTCTTGAGCCAGAACTCACCCACCTCCTCTGGGCGTGATGGGATAAAGCAGAACCCTCATGCCTTCTTTTaGTTAGTTTTCCTGATCTTC +
Preference number: 4 (lower is better)
Translates to: LLSQNSPTSSGRDGIKQNPHAFF*LVFLIF
Trigger: GAAGATCAGGAAAACTAAGCAAAAGAAGGCATGAGG...GTTCTGCTTTATCCCATCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR GCA 90 bp CACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGTACTCCAACCCCTaGCCCTACGTCTGCTACTGT +
Preference number: 4 (lower is better)
Translates to: HFLSLLVLYAPFTSSCLLLYSNP*PYVCYC
Trigger: ACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAA...AAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTAGAGGGACAGTGACTTaGCTGGGTTCACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFRGTVT*LGSQSP
Trigger: TGGGCTCTGTGAACCCAGGCAAGTCACTGTCCCTCT...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp TTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTTAGTTTTCCTTGCAGTTCTCTGTGGTaGCTCTGGGACACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LVLYAPFTSSCLLLLSFPCSSLW*LWDTGR
Trigger: TCTCCCAGTGTCCCAGAGGCACCACAGAGAACTGCA...AGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCGACCTTGACTTAGGATaGCAGGGGGAGGTGTTGATC +
Preference number: 4 (lower is better)
Translates to: FFPYWCCMLPSHPHAFFCDLDLG*QGEVLI
Trigger: GATCAACACCTCCCCCTGCCATCCTAAGTCAAGGTC...GCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGTGTCCACTTGGACCTaGGATGAAGGGCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIAVSTWT*DEGPER
Trigger: TCTTTCAGGCCCTTCATCCCAGGTCCAAGTGGACAC...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTTTCGCAAAGGAGCTCTaGCATGACCTGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFFAKEL*HDLGKW
Trigger: CCACTTCCCCAGGTCATGCCAGAGCTCCTTTGCGAA...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CCCTTCTTGACTTCCTTGAAGCCACTTTCCTTCAACAGGCAGCTTGAATGTGAGCCATCCTCTGGGCTTTaGCTTGGTTGTTACAAGTCC +
Preference number: 4 (lower is better)
Translates to: PFLTSLKPLSFNRQLECEPSSGL*LGCYKS
Trigger: GGACTTGTAACAACCAAGCCAAAGCCCAGAGGATGG...CTCACATTCAAGCTGCCTGTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCTGCATGTTCTTCGTaGCTGTGTTTGCAGCGACAT +
Preference number: 4 (lower is better)
Translates to: ERCYALQPLNTVSCTPTPAACSS*LCLQRH
Trigger: ATGTCGCTGCAAACACAGCCACGAAGAACATGCAGC...AGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCCCTTTCCTCCATCTCTaGGATCTTGTCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: FFPYWCCMLPSHPHAFFCPFLHL*DLVSPG
Trigger: GCCTGGTGAGACAAGATCCCAGAGATGGAGGAAAGG...GCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CCTTTCTCCTCTAAAGGGCAGACATTTGATTCTGTGATTTTCCCCAGGGATCCTGATGGGACTATCCAATaGAGCCTCATAGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: PFSSKGQTFDSVIFPRDPDGTIQ*SLIGRG
Trigger: ACCCCTACCTATGAGGCTTCATTGGATAGTCCCATC...AGGATCCCTGGGGAAAATCACAGAATCAAATGTCTGCCCTTTAGAGGAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CCCTTCTTGACTTCCTTGAAGCCACTTTCCTTCAACAGGCAGCTTGAATGTGAGACAGACATAGTCTCGTaGTTGGGGAGGAAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: PFLTSLKPLSFNRQLECETDIVS*LGRKSK
Trigger: CTTACTCTTCCTCCCCAATCACGAGACTATGTCTGT...CTCACATTCAAGCTGCCTGTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp TTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTTAGTTTTCCTCACCTCCTCTGGGCGTaGTGGGATAAAGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: LVLYAPFTSSCLLLLSFPHLLWA*WDKAEH
Trigger: ATGTTCTGCTTTATCCCATCACGCCCAGAGGAGGTG...AGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp GAAGCCAGTCTGGAGGATAGGTGGATACAAAGCACTTTGAAATTAGTTATTTCTAGGTGGCCCGTCTCTTaGGCCAGAACTCACCCACCT +
Preference number: 4 (lower is better)
Translates to: EASLEDRWIQSTLKLVISRWPVS*ARTHPP
Trigger: AGGTGGGTGAGTTCTGGCTCAAGAGACGGGCCACCT...AGAAATAACTAATTTCAAAGTGCTTTGTATCCACCTATCCTCCAGACTGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTAAACTCACTGCTGTTTaGCTCCTGCCTCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTKLTAV*LLPPLH
Trigger: GTGCAGTGGAGGCAGGAGTCAAACAGCAGTGAGTTT...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTCCTGCTTCTTCCTCCTaGTTTTCGGTTGTGTCCACT +
Preference number: 4 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIAPASSS*FSVVST
Trigger: AGTGGACACAACCGAAAAGCAGGAGGAAGAAGCAGG...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CCCTTCTTGACTTCCTTGAAGCCACTTTCCTTCAACAGGCAGCTTGAATGTGAGTCTGAGATGATCCGGTaGTCTCTCAACAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PFLTSLKPLSFNRQLECESEMIR*SLNKCP
Trigger: TGGACACTTGTTGAGAGAGCACCGGATCATCTCAGA...CTCACATTCAAGCTGCCTGTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp TTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGACTTCCCTTGCCTGAAAGTCTaGTATCTGGGAAGGGGACTT +
Preference number: 4 (lower is better)
Translates to: LVLESPTPIRTYGLPCDFPCLKV*YLGRGL
Trigger: AAGTCCCCTTCCCAGATAGCAGACTTTCAGGCAAGG...GAAGTCACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTAGTGTTGAAATGCCTTaGCTGAAAGTCTGCTATCTG +
Preference number: 4 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETSVEMP*LKVCYL
Trigger: CAGATAGCAGACTTTCAGGCAAGGCATTTCAACACT...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAAGTGTTGAAATGCCTTaGCTGAAAGTCTGCTATCTG +
Preference number: 4 (lower is better)
Translates to: HCLLYSNPCPYVCYCTSLSVEMP*LKVCYL
Trigger: CAGATAGCAGACTTTCAGGCAAGGCATTTCAACACT...TAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTTCTATGATCTCATGTaGTTCCATCCTCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: QASLLSLLGPSRSFSLLAFYDLM*FHPLGF
Trigger: AAAGCCCAGAGGATGGAAGCACATGAGATCATAGAA...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCAAATCCCTTCACCTCTaGTTTGACCTCATCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GITFFPYWCCMLPSHPHAKSLHL*FDLIPF
Trigger: GAAAGGGATGAGGTCAAAGCAGAGGTGAAGGGATTT...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGACTTCACGGGGTCTCAGAGGTaGAAGGCTTCAAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LVLESPTPIRTYGLPCDFTGSQR*KASRSF
Trigger: AAAGCTTCTTGAAGCCTTCCACCTCTGAGACCCCGT...GAAGTCACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp AGCCCATTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTAGACCTCCTTGTCCATaGGACCTCATTGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SPLVLESPTPIRTYGLPCRPPCP*DLIGRR
Trigger: TCTTCTTCCAATGAGGTCCCATGGACAAGGAGGTCT...ACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAATGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGAGCAGTGCTGTCACTaGCATCTACTCCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: ERCYALQPLNTVSCTPTPEQCCH*HLLPFQ
Trigger: TTGAAAAGGGAGTAGATGCCAGTGACAGCACTGCTC...AGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp AGCCCATTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGAGCAGTGCTGTCACTaGCATCTACTCCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SPLVLESPTPIRTYGLPCEQCCH*HLLPFQ
Trigger: TTGAAAAGGGAGTAGATGCCAGTGACAGCACTGCTC...ACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAATGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTGTCCACAAAAGCATCTaGACTCATCCCCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: HFLSLLVLYAPFTSSCLLVHKSI*THPQSG
Trigger: TCCGGATTGGGGATGAGTCCAGATGCTTTTGTGGAC...AAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATAATGAAGCAGCGGCACTaGCTTACCTTGCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEIMKQRH*LTLQGT
Trigger: GGTGCCCTGCAAGGTAAGCCAGTGCCGCTGCTTCAT...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTTGTGCTTCCATCCTCTaGGCTTTGGCTTGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: HLHLPSSERCYALQPLNTCASIL*ALAWLL
Trigger: TAACAACCAAGCCAAAGCCCAGAGGATGGAAGCACA...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGATCTGGGCCAGTTCTGTCTGTCTGGATaGCATTCAGGGCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: YRAKSGSNDSSFIADLGQFCLSG*HSGLHP
Trigger: AGGATGCAGCCCTGAATGCCATCCAGACAGACAGAA...CTGGCCCAGATCAGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CCA 90 bp CAAGCACTTATCACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCGAATTCTGTCTGTCTaGATGGCATTCAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QALITFTCPHLKDVMLCSRILSV*MAFRAA
Trigger: TGCAGCCCTGAATGCCATCCAGACAGACAGAATTCG...GCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAGTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CCA 90 bp GAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGGTCCTTTAGTCTACTaGCCTCTTCCCCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: ERCYALQPLNTVSCTPTPGPLVY*PLPLFL
Trigger: AAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACC...AGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp GGGACAGTGACTTGCCTGGGTTCACAGAGCCCATTAGTGCTGGAATCTCCTACTACTGATTTTGATCCTTaGCCCACAGTTTTCTCTACT +
Preference number: 4 (lower is better)
Translates to: GTVTCLGSQSPLVLESPTTDFDP*PTVFST
Trigger: AGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGT...AGTAGGAGATTCCAGCACTAATGGGCTCTGTGAACCCAGGCAAGTCACTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTACAGACATAGTCTCGTaGTTGGGGAGGAAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIATDIVS*LGRKSK
Trigger: CTTACTCTTCCTCCCCAATCACGAGACTATGTCTGT...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCTAAGTTATTAGGCCTCCTCTCTATGCATTaGCTTAGCCACTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: PDPGFLLCLIGVNSKLLGLLSMH*LSHFHQ
Trigger: CTGGTGGAAGTGGCTAAGGCAATGCATAGAGAGGAG...GCCTAATAACTTAGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTGGGGACTTGGATATCTaGAGAACTTCGCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFGDLDI*RTSQRS
Trigger: GCTCCTTTGCGAAGTTCTGCAGATATCCAAGTCCCC...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTCTTGAGCCAGAACTCACCCACCTCCTCTGGGCGTGATGGGATAAAGCAGAACCAAAGATCTTCTAATTaGAAAACCCAATGGACACTT +
Preference number: 4 (lower is better)
Translates to: LLSQNSPTSSGRDGIKQNQRSSN*KTQWTL
Trigger: AAGTGTCCATTGGGTTTTGCAATTAGAAGATCTTTG...GTTCTGCTTTATCCCATCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR GCA 90 bp CACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTAAATCCCTTCACCTCTaGTTTGACCTCATCCCTTTC +
Preference number: 4 (lower is better)
Translates to: HLPSSERCYALQPLNTVSKSLHL*FDLIPF
Trigger: GAAAGGGATGAGGTCAAAGCAGAGGTGAAGGGATTT...AGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCCCTCATGCCTTCTTTTaGTTAGTTTTCCTGATCTTC +
Preference number: 4 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSPHAFF*LVFLIF
Trigger: GAAGATCAGGAAAACTAAGCAAAAGAAGGCATGAGG...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp TTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCCCTATTGGTGCTGTATaGTCCCTTCACATCCTCATG +
Preference number: 4 (lower is better)
Translates to: FFPYWCCMLPSHPHAFFCPIGAV*SLHILM
Trigger: CATGAGGATGTGAAGGGAGCATACAGCACCAATAGG...GCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATAGGGAGGAAAGGCTCTTaGTTGTGGATGTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEIGRKGS*LWMCLS
Trigger: GCTGAGGCACATCCACAACCAAGAGCCTTTCCTCCC...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTCTCTGGGCTTTGGCTTaGTTGTTACAAGTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIALWALA*LLQVLR
Trigger: CCTAAGGACTTGTAACAACCAAGCCAAAGCCCAGAG...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGATCTGGGCCAGAAGGAGTCTCAGAGATaGAAGGCTCCTGATGGGTTT +
Preference number: 4 (lower is better)
Translates to: YRAKSGSNDSSFIADLGQKESQR*KAPDGF
Trigger: AAACCCATCAGGAGCCTTCCATCTCTGAGACTCCTT...CTGGCCCAGATCAGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTGTCCACAAAAGCATCTaGACTCATCCCCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTVHKSI*THPQSG
Trigger: TCCGGATTGGGGATGAGTCCAGATGCTTTTGTGGAC...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTTCTGGGAAGGGGACTTaGATATCTGCAGAACTTCGC +
Preference number: 4 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFSGKGT*ISAELR
Trigger: GCGAAGTTCTGCAGATATCCAAGTCCCCTTCCCAGA...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CAAGCACTTATCACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTTTTATTGCTGATCTaGGCCAGACTCACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: QALITFTCPHLKDVMLCSLLLLI*ARLTKA
Trigger: GGCCTTTGTGAGTCTGGCCCAGATCAGCAATAAAAG...GCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAGTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTGGAAGGAAGCCAGTCTaGAGGATAGGTGGATACAAA +
Preference number: 4 (lower is better)
Translates to: HFLSLLVLYAPFTSSCLLGRKPV*RIGGYK
Trigger: TTTGTATCCACCTATCCTCCAGACTGGCTTCCTTCC...AAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCAAAAGATTGTTCACTTaGGCACCAAACTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: GITFFPYWCCMLPSHPHAKRLFT*APNSSL
Trigger: TAGAGAGGAGTTTGGTGCTCAAGTGAACAATCTTTT...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CCTTTCTCCTCTAAAGGGCAGACATTTGATTCTGTGATTTTCCCCAGGGATCCTTCACTTGCCCTCATCTaGAAGATGTTATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PFSSKGQTFDSVIFPRDPSLALI*KMLCSA
Trigger: TGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGA...AGGATCCCTGGGGAAAATCACAGAATCAAATGTCTGCCCTTTAGAGGAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp AGATGGCCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCTAAGTTATCTCTTCTTGTCTCCTaGTCCCTACTCTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: RWPDPGFLLCLIGVNSKLSLLVS*SLLLSL
Trigger: GAGGGATAAGAGTAGGGAGCAGGAGACAAGAAGAGA...TAACTTAGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGGCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTCCTATTGGTGCTGTATaGTCCCTTCACATCCTCATG +
Preference number: 4 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFPIGAV*SLHILM
Trigger: CATGAGGATGTGAAGGGAGCATACAGCACCAATAGG...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CCCTTCTTGACTTCCTTGAAGCCACTTTCCTTCAACAGGCAGCTTGAATGTGAGTTCTTTCCCTATTGGTaGTGTATGCTCCCTTCACAT +
Preference number: 4 (lower is better)
Translates to: PFLTSLKPLSFNRQLECEFFPYW*CMLPSH
Trigger: ATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA...CTCACATTCAAGCTGCCTGTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTTAGTTTTCCTAAGGAGTCTCAGAGATaGAAGGCTCCTGATGGGTTT +
Preference number: 4 (lower is better)
Translates to: LVLYAPFTSSCLLLLSFPKESQR*KAPDGF
Trigger: AAACCCATCAGGAGCCTTCCATCTCTGAGACTCCTT...AGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCTAAGTTATTAGGCTCCATGGGACCTCATTaGAAGAAGACTCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PDPGFLLCLIGVNSKLLGSMGPH*KKTQRR
Trigger: TCTCCTCTGAGTCTTCTTCCAATGAGGTCCCATGGA...GCCTAATAACTTAGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACCGTTGCCGGGTCTTCTaGGTGTCAAAGAAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHRCRVF*VSKKVS
Trigger: CGAGACTTTCTTTGACACCCAGAAGACCCGGCAACG...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTGGTCCTTTAGTCTACTaGCCTCTTCCCCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTGPLVY*PLPLFL
Trigger: AAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACC...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGATCTGGGCCAGCTCTTCTCTCTCTTCTaGGTCCTTCAAGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: YRAKSGSNDSSFIADLGQLFSLF*VLQGPL
Trigger: TAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAG...CTGGCCCAGATCAGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACCTGGACCCCAGCCATTaGCCTTATCTCCTACTTCAC +
Preference number: 4 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHLDPSH*PYLLLH
Trigger: GTGAAGTAGGAGATAAGGCCAATGGCTGGGGTCCAG...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTCTGTCATTTGCCTCCTaGCATCACTTTCTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIALSFAS*HHFLSL
Trigger: TAGGGAAAGAAAGTGATGCCAGGAGGCAAATGACAG...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTAGAGATAAGTGGATCTaGGATCTAGGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HFLSLLVLYAPFTSSCLLRDKWI*DLGRGR
Trigger: CCTTCCTCTTCCTAGATCCCAGATCCACTTATCTCT...AAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp TTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTTAGTTTTCCTTCACTTGCCCTCATCTaGAAGATGTTATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LVLYAPFTSSCLLLLSFPSLALI*KMLCSA
Trigger: TGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGA...AGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATACTCCTTGAAACTCACTaGTGTTTGACTCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEILLETH*CLTPAS
Trigger: GGAGGCAGGAGTCAAACAGCAGTGAGTTTCAAGGAG...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATATCTCACTTCCAACTGTaGCCGAATCCTGAACTACCC +
Preference number: 4 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEISHFQL*PNPELP
Trigger: GGGTAGTTCAGGATTCGGGCACAGTTGGAAGTGAGA...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CCCTTCTTGACTTCCTTGAAGCCACTTTCCTTCAACAGGCAGCTTGAATGTGAGCTTATCACCTTCACTTaGCCTCATCTGAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: PFLTSLKPLSFNRQLECELITFT*PHLKDV
Trigger: AACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAG...CTCACATTCAAGCTGCCTGTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTAAGCTTTCAGAGATATaGTTCTCCTGTAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: HLHLPSSERCYALQPLNTKLSEI*FSCKSS
Trigger: TGAGGACTTACAGGAGAACCATATCTCTGAAAGCTT...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTCTCTTCTCTCTCTTCTaGGTCCTTCAAGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFLFSLF*VLQGPL
Trigger: TAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAG...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTACTGATTTTGATCCTTaGCCCACAGTTTTCTCTACT +
Preference number: 4 (lower is better)
Translates to: HLHLPSSERCYALQPLNTTDFDP*PTVFST
Trigger: AGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGT...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
3UTR CAA 72 bp TATGGACTCCCTTGTGACTTCCCACATTCACTGATTTaGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: YGLPCDFPHSLI*ILGPQFSLLQA
Trigger: TGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGGAAGTCACAAGGGAGTCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp CAAGCACTTATCACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCAAAAGATTGTTCACTTaGGCACCAAACTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: QALITFTCPHLKDVMLCSKRLFT*APNSSL
Trigger: TAGAGAGGAGTTTGGTGCTCAAGTGAACAATCTTTT...GCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAGTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATATCTGAGATGATCCGGTaGTCTCTCAACAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEISEMIR*SLNKCP
Trigger: TGGACACTTGTTGAGAGAGCACCGGATCATCTCAGA...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCTAAGTTATTAGGCTTCTTTCCCTATTGGTaGTGTATGCTCCCTTCACAT +
Preference number: 4 (lower is better)
Translates to: PDPGFLLCLIGVNSKLLGFFPYW*CMLPSH
Trigger: ATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA...GCCTAATAACTTAGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp CAAGCACTTATCACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCTTTCAATCTGTCATTTaGCTCCTGGCATCACTTTCT +
Preference number: 4 (lower is better)
Translates to: QALITFTCPHLKDVMLCSFQSVI*LLASLS
Trigger: AGAAAGTGATGCCAGGAGGCAAATGACAGATTGAAA...GCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAGTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp ATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGATCTGGGCCAGACTTATCACCTTCACTTaGCCTCATCTGAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: IEPSQVPMTPLLLLIWARLITFT*PHLKDV
Trigger: AACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAG...TCTGGCCCAGATCAGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp TATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGATCTGGGCCAGAAGCTTTCAGAGATATaGTTCTCCTGTAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: YRAKSGSNDSSFIADLGQKLSEI*FSCKSS
Trigger: TGAGGACTTACAGGAGAACCATATCTCTGAAAGCTT...CTGGCCCAGATCAGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATATGTGCTTCCATCCTCTaGGCTTTGGCTTGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEICASIL*ALAWLL
Trigger: TAACAACCAAGCCAAAGCCCAGAGGATGGAAGCACA...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR TCA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACTTGAAATGCCTTGCCTaGAAGTCTGCTATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHLKCLA*KSAIWE
Trigger: TTCCCAGATAGCAGACTTTCAGGCAAGGCATTTCAA...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR GCA 90 bp TTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTTAGTTTTCCTTTTCAATCTGTCATTTaGCTCCTGGCATCACTTTCT +
Preference number: 4 (lower is better)
Translates to: LVLYAPFTSSCLLLLSFPFQSVI*LLASLS
Trigger: AGAAAGTGATGCCAGGAGGCAAATGACAGATTGAAA...AGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CCA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATAAGAGATAAGTGGATCTaGGATCTAGGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEIRDKWI*DLGRGR
Trigger: CCTTCCTCTTCCTAGATCCCAGATCCACTTATCTCT...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TGTTCTTCGTGGCTGTGTTTGCAGCGACATTGGGCCCTCCAGGCCTTGGGGTCAATTGCATTCCTTCCCTaGGAGGAACAGATGGCCCCC +
Preference number: 5 (lower is better)
Translates to: CSSWLCLQRHWALQALGSIAFLP*EEQMAP
Trigger: GGGGGCCATCTGTTCCTCCAAGGGAAGGAATGCAAT...TGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS CCA 90 bp TATCTGCAGAACTTCGCAAAGGAGCTCTGGCATGACCTGGGGAAGTaGGTAGGGACAAGGGGTCTAGGGCCAATGAGGGAGGGTCTTGAC +
Preference number: 5 (lower is better)
Translates to: YLQNFAKELWHDLGK*VGTRGLGPMREGLD
Trigger: GTCAAGACCCTCCCTCATTGGCCCTAGACCCCTTGTCCCTACCCACTTCCCCAGGTCATGCCAGAGCTCCTTTGCGAAGTTCTGCAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388950.8
ENST00000423537.7
ENST00000472182.1
CDS-3UTR CAA 90 bp CCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTGGCCTTATCTAGGGAGGAAAGGCTCTaGGTTGTGGATGTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: PAPYSYPSSPGPQPLALSREERL*VVDVPQ
Trigger: CTGAGGCACATCCACAACCAAGAGCCTTTCCTCCCT...AGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS TCA 90 bp ACTGGGCGGGCTGTGTTACCTAGTTGGTGTCCAGGTTGGGCTGTGTaGGCAGTGCTGTCACTGGCATCTACTCCCTTTTCAACCTCTCCT +
Preference number: 5 (lower is better)
Translates to: TGRAVLPSWCPGWAV*AVLSLASTPFSTSP
Trigger: AGGAGAGGTTGAAAAGGGAGTAGATGCCAGTGACAGCACTGCTCACACAGCCCAACCTGGACACCAACTAGGTAACACAGCCCGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTTGGCAGGGGGAGGTGTaGATCCTCAGGGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETWQGEV*ILREER
Trigger: CCTTTCCTCCCTGAGGATCAACACCTCCCCCTGCCA...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp GGGACAGTGACTTGCCTGGGTTCACAGAGCCCATTAGTGCTGGAATCTCCTACTCGGCACTGGCTTACCTaGCAGGGCACCGATATGTCT +
Preference number: 5 (lower is better)
Translates to: GTVTCLGSQSPLVLESPTRHWLT*QGTDMS
Trigger: AGACATATCGGTGCCCTGCAAGGTAAGCCAGTGCCG...AGTAGGAGATTCCAGCACTAATGGGCTCTGTGAACCCAGGCAAGTCACTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS GCA 90 bp CACCAGGGAGGCTTTGTTGAGAGAGCAAGGTATAGGCAGTCACAATaGAGGTGGGCGGGAGCCAGGATTCCACTAGAGGAGTTCCGAATT +
Preference number: 5 (lower is better)
Translates to: HQGGFVERARYRQSQ*RWAGARIPLEEFRI
Trigger: AATTCGGAACTCCTCTAGTGGAATCCTGGCTCCCGCCCACCTGCATTGTGACTGCCTATACCTTGCTCTCTCAACAAAGCCTCCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CAA 90 bp GAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGTGTTTGCAGCGACATaGGGCCCTCCAGGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: ERCYALQPLNTVSCTPTPVFAAT*GPPGLG
Trigger: CCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACAC...AGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp GAGGAAATTAGACTCAAAACAGCCGCAGCAACAGCCATGATGCCTGCAGGGATGTCTTCGTGGCTGTGTTaGCAGCGACATTGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: EEIRLKTAAATAMMPAGMSSWLC*QRHWAL
Trigger: GAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGA...CATCCCTGCAGGCATCATGGCTGTTGCTGCGGCTGTTTTGAGTCTAATTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CAA 90 bp CTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTCTTCGTGGCTGTGTTaGCAGCGACATTGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LLSLLGPSRSFSLLASSPSSWLC*QRHWAL
Trigger: GAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGA...AGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTAGGCCTTCCTCCTCGTaGCCGGGTCTTCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: HLPSSERCYALQPLNTVSRPSSS*PGLLGV
Trigger: GACACCCAGAAGACCCGGCAACGAGGAGGAAGGCCT...AGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp GAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTAGGCCTTCCTCCTCGTaGCCGGGTCTTCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: ERCYALQPLNTVSCTPTPRPSSS*PGLLGV
Trigger: GACACCCAGAAGACCCGGCAACGAGGAGGAAGGCCT...AGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TGTTCTTCGTGGCTGTGTTTGCAGCGACATTGGGCCCTCCAGGCCTTGGGGTCAATGACTCCTCTTTTATaGCTGATCTGGGCCAGACTC +
Preference number: 5 (lower is better)
Translates to: CSSWLCLQRHWALQALGSMTPLL*LIWARL
Trigger: GAGTCTGGCCCAGATCAGCAATAAAAGAGGAGTCAT...TGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACACAGCCACGAAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS GCA 90 bp GTGAGCAGTGCTGTCACTGGCATCTACTCCCTTTTCAACCTCTCCTaGTTCTTCCTCCTGCTTTTCGGTTGTGTCCACTTGGACCTGGGA +
Preference number: 5 (lower is better)
Translates to: VSSAVTGIYSLFNLS*FFLLLFGCVHLDLG
Trigger: TCCCAGGTCCAAGTGGACACAACCGAAAAGCAGGAGGAAGAAGCAGGAGAGGTTGAAAAGGGAGTAGATGCCAGTGACAGCACTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS GCA 90 bp GGGCTGTGTTACCTAGTTGGTGTCCAGGTTGGGCTGTGTGAGCAGTaGTGTCACTGGCATCTACTCCCTTTTCAACCTCTCCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: GLCYLVGVQVGLCEQ*CHWHLLPFQPLLLL
Trigger: AAGAAGCAGGAGAGGTTGAAAAGGGAGTAGATGCCAGTGACAGCACTGCTCACACAGCCCAACCTGGACACCAACTAGGTAACACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS CCA 90 bp TCAACCTCTCCTGCTTCTTCCTCCTGCTTTTCGGTTGTGTCCACTTaGACCTGGGATGAAGGGCCTGAAAGACAGTGTTCTGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: STSPASSSCFSVVST*TWDEGPERQCSGRL
Trigger: GAGCCTTCCAGAACACTGTCTTTCAGGCCCTTCATCCCAGGTCCAAGTGGACACAACCGAAAAGCAGGAGGAAGAAGCAGGAGAGGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TTAGGCAGTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCAATCTGGGAAGGGGACTaGGATATCTGCAGAACTTCG +
Preference number: 5 (lower is better)
Translates to: LGSLSLGWDLPAPYRAKSIWEGD*DICRTS
Trigger: CGAAGTTCTGCAGATATCCAAGTCCCCTTCCCAGAT...TGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACTGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTCCCTTCACCTCTGCTTaGACCTCATCCCTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETPFTSA*TSSLSS
Trigger: GGAGGAAAGGGATGAGGTCAAAGCAGAGGTGAAGGG...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS TCA 90 bp CTCTGGGCTTTGGCTTGGTTGTTACAAGTCCTTAGGTCAAGACCTTaGCTTAGGATGGCAGGGGGAGGTGTTGATCCTCAGGGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: LWALAWLLQVLRSRP*LRMAGGGVDPQGGK
Trigger: CTTTCCTCCCTGAGGATCAACACCTCCCCCTGCCATCCTAAGTCAAGGTCTTGACCTAAGGACTTGTAACAACCAAGCCAAAGCCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
ENST00000472182.1
CDS CCA 90 bp TCTCCTGCTTCTTCCTCCTGCTTTTCGGTTGTGTCCACTTGGACCTaGGATGAAGGGCCTGAAAGACAGTGTTCTGGAAGGCTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: SPASSSCFSVVSTWT*DEGPERQCSGRLSD
Trigger: ATCTGAGAGCCTTCCAGAACACTGTCTTTCAGGCCCTTCATCCCAGGTCCAAGTGGACACAACCGAAAAGCAGGAGGAAGAAGCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCGTCCATGGGACCTCATaGGAAGAAGACTCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: QASLLSLLGPSRSFSLLAVHGTS*EEDSEE
Trigger: CTCCTCTGAGTCTTCTTCCAATGAGGTCCCATGGAC...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCTAAGTTATTAGGCGTGTTTGCAGCGACATaGGGCCCTCCAGGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: PDPGFLLCLIGVNSKLLGVFAAT*GPPGLG
Trigger: CCCAAGGCCTGGAGGGCCCAATGTCGCTGCAAACAC...GCCTAATAACTTAGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp GGCATCACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTCTGAACACTGTCTCTaGTACTCCAACCCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: GITFFPYWCCMLPSHPHASEHCL*YSNPCP
Trigger: GGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGA...GGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGATCTGGGCCAGTGGGAGACCCTAGAGTaGCCCTGGAGAAGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: YRAKSGSNDSSFIADLGQWETLE*PWRRAR
Trigger: TCTCGCCCTTCTCCAGGGCAACTCTAGGGTCTCCCA...CTGGCCCAGATCAGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS GCA 90 bp CCTCAGCTGCAGGTGCTGAGTGTTGAAATGCCTTGCCTGAAAGTCTaGTATCTGGGAAGGGGACTTGGATATCTGCAGAACTTCGCAAAG +
Preference number: 5 (lower is better)
Translates to: PQLQVLSVEMPCLKV*YLGRGLGYLQNFAK
Trigger: CTTTGCGAAGTTCTGCAGATATCCAAGTCCCCTTCCCAGATAGCAGACTTTCAGGCAAGGCATTTCAACACTCAGCACCTGCAGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388950.8
ENST00000423537.7
ENST00000472182.1
CDS CCA 90 bp TGGCTTGGTTGTTACAAGTCCTTAGGTCAAGACCTTGACTTAGGATaGCAGGGGGAGGTGTTGATCCTCAGGGAGGAAAGGCTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: WLGCYKSLGQDLDLG*QGEVLILREERLLV
Trigger: AACCAAGAGCCTTTCCTCCCTGAGGATCAACACCTCCCCCTGCCATCCTAAGTCAAGGTCTTGACCTAAGGACTTGTAACAACCAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
ENST00000472182.1
CDS CCA 90 bp TGGAAGGCTCTCAGATTCAGAGAGATGGGTAGACCTCCTTGTCCATaGGACCTCATTGGAAGAAGACTCAGAGGAGAGGTCTTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: WKALRFREMGRPPCP*DLIGRRLRGEVFLQ
Trigger: CTGAAGGAAGACCTCTCCTCTGAGTCTTCTTCCAATGAGGTCCCATGGACAAGGAGGTCTACCCATCTCTCTGAATCTGAGAGCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTTGGCAGGGGGAGGTGTaGATCCTCAGGGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFWQGEV*ILREER
Trigger: CCTTTCCTCCCTGAGGATCAACACCTCCCCCTGCCA...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTATCTGGGAAGGGGACTaGGATATCTGCAGAACTTCG +
Preference number: 5 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETIWEGD*DICRTS
Trigger: CGAAGTTCTGCAGATATCCAAGTCCCCTTCCCAGAT...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTAGGAAAGGCTCTTGGTaGTGGATGTGCCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HLHLPSSERCYALQPLNTRKGSW*WMCLSC
Trigger: GCAGCTGAGGCACATCCACAACCAAGAGCCTTTCCT...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTAAAGGCCTGTGCCAGTaGCTGACAGTGTCTGTCCCG +
Preference number: 5 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIAKGLCQ*LTVSVP
Trigger: CGGGACAGACACTGTCAGCAACTGGCACAGGCCTTT...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCCCTTCAACAGGCAGCTaGAATGTGAGTGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: QASLLSLLGPSRSFSLLAPSTGS*NVSVME
Trigger: CTCCATCACACTCACATTCAAGCTGCCTGTTGAAGG...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCTCCATCTCTGGGATCTaGTCTCACCAGGCATCTCTT +
Preference number: 5 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSSISGI*SHQASL
Trigger: AAGAGATGCCTGGTGAGACAAGATCCCAGAGATGGA...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp GCTCTGCAGCCTCTGAACACTGTCTCTTGTACTCCAACCCCTGCCCCTACGTCTACTTATCACCTTCACTaGCCCTCATCTGAAAGATGT +
Preference number: 5 (lower is better)
Translates to: ALQPLNTVSCTPTPAPTSTYHLH*PSSERC
Trigger: ACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAGT...AGACGTAGGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGAGGCTGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTGGCCTTATCTACTTATCACCTTCACTaGCCCTCATCTGAAAGATGT +
Preference number: 5 (lower is better)
Translates to: PAPYSYPSSPGPQPLALSTYHLH*PSSERC
Trigger: ACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAGT...AGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTGGGAGACCCTAGAGTaGCCCTGGAGAAGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTWETLE*PWRRAR
Trigger: TCTCGCCCTTCTCCAGGGCAACTCTAGGGTCTCCCA...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp AGCCCATTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTATTGCATTCCTTCCCTaGGAGGAACAGATGGCCCCC +
Preference number: 5 (lower is better)
Translates to: SPLVLESPTPIRTYGLPCIAFLP*EEQMAP
Trigger: GGGGGCCATCTGTTCCTCCAAGGGAAGGAATGCAAT...ACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAATGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS TCA 90 bp GCATTCAGGGCTGCATCCTTCTCCCACTGGAAAAGATTGTTCACTTaGGCACCAAACTCCTCTCTATGCATTGCCTTAGCCACTTCCACC +
Preference number: 5 (lower is better)
Translates to: AFRAASFSHWKRLFT*APNSSLCIALATST
Trigger: GGTGGAAGTGGCTAAGGCAATGCATAGAGAGGAGTTTGGTGCTCAAGTGAACAATCTTTTCCAGTGGGAGAAGGATGCAGCCCTGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCAGGGAGGAAAGGCTCTaGGTTGTGGATGTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: FFPYWCCMLPSHPHAFFCREERL*VVDVPQ
Trigger: CTGAGGCACATCCACAACCAAGAGCCTTTCCTCCCT...GCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTTAGTTTTCCTCGGCACTGGCTTACCTaGCAGGGCACCGATATGTCT +
Preference number: 5 (lower is better)
Translates to: LVLYAPFTSSCLLLLSFPRHWLT*QGTDMS
Trigger: AGACATATCGGTGCCCTGCAAGGTAAGCCAGTGCCG...AGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp ATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGATCTGGGCCAGAAGGAAAGGCTCTTGGTaGTGGATGTGCCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IEPSQVPMTPLLLLIWARRKGSW*WMCLSC
Trigger: GCAGCTGAGGCACATCCACAACCAAGAGCCTTTCCT...TCTGGCCCAGATCAGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp GAGGAAATTAGACTCAAAACAGCCGCAGCAACAGCCATGATGCCTGCAGGGATGTACACCAGGGAGGCTTaGTTGAGAGAGCAAGGTATA +
Preference number: 5 (lower is better)
Translates to: EEIRLKTAAATAMMPAGMYTREA*LREQGI
Trigger: TATACCTTGCTCTCTCAACAAAGCCTCCCTGGTGTA...CATCCCTGCAGGCATCATGGCTGTTGCTGCGGCTGTTTTGAGTCTAATTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CAA 90 bp CTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTCCCACTCTATCCTTCTaGAAACTTCCTCCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLSLLGPSRSFSLLASSPPTLSF*KLPPFL
Trigger: CAAGAAGGGAGGAAGTTTCAAGAAGGATAGAGTGGG...AGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTGATCTGGGCCAGCCCTTCACCTCTGCTTaGACCTCATCCCTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: YRAKSGSNDSSFIADLGQPFTSA*TSSLSS
Trigger: GGAGGAAAGGGATGAGGTCAAAGCAGAGGTGAAGGG...CTGGCCCAGATCAGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CAGGCATCTCTTCTCTCTCTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCCACTTTCTTTCCCTATaGGTGCTGTATGCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: QASLLSLLGPSRSFSLLAHFLSL*VLYAPF
Trigger: GAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG...GGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAGAGAGAGAAGAGATGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTCACTTTCTTTCCCTATaGGTGCTGTATGCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETHFLSL*VLYAPF
Trigger: GAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTTCTGAACACTGTCTCTaGTACTCCAACCCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIASEHCL*YSNPCP
Trigger: GGGGCAGGGGTTGGAGTACAAGAGACAGTGTTCAGA...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp AGCCCATTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTCCTTCAACAGGCAGCTaGAATGTGAGTGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: SPLVLESPTPIRTYGLPCPSTGS*NVSVME
Trigger: CTCCATCACACTCACATTCAAGCTGCCTGTTGAAGG...ACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAATGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CCTGCTCCCTACTCTTATCCCTCTTCCCCTGGACCCCAGCCATTGGCCTTATCTAACTCCCTCTGGATATaGTCTGACTTTACTTTTGTA +
Preference number: 5 (lower is better)
Translates to: PAPYSYPSSPGPQPLALSNSLWI*SDFTFV
Trigger: TACAAAAGTAAAGTCAGACAATATCCAGAGGGAGTT...AGATAAGGCCAATGGCTGGGGTCCAGGGGAAGAGGGATAAGAGTAGGGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTTCTGGGTCCTTCAAGGTCCTTTAGTCTACTGGCCTCTTCCCCTTTTCCTTCCTACAAAAGTACTTCCTaGACTCCACAACTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LLGPSRSFSLLASSPFPSYKSTS*TPQLPL
Trigger: CAGAGGGAGTTGTGGAGTCAAGGAAGTACTTTTGTA...GGAAGGAAAAGGGGAAGAGGCCAGTAGACTAAAGGACCTTGAAGGACCCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TTAGGCAGTCTCTCCCTGGGCTGGGATCTACCTGCCCCATATAGAGCCAAGTCATCCTCATGCCTTCTTTaGCTTAGTTTTCCTGATCTT +
Preference number: 5 (lower is better)
Translates to: LGSLSLGWDLPAPYRAKSSSCLL*LSFPDL
Trigger: AAGATCAGGAAAACTAAGCAAAAGAAGGCATGAGGA...TGACTTGGCTCTATATGGGGCAGGTAGATCCCAGCCCAGGGAGAGACTGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTACCTGCCCCATATAGAGCCAAGTCAGGTTCCAATGACTCCTCTTTTATTGCTTCCATCCTCTGGGCTTaGGCTTGGTTGTTACAAGTC +
Preference number: 5 (lower is better)
Translates to: LPAPYRAKSGSNDSSFIASILWA*AWLLQV
Trigger: GACTTGTAACAACCAAGCCAAAGCCCAGAGGATGGA...AGCAATAAAAGAGGAGTCATTGGAACCTGACTTGGCTCTATATGGGGCAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTCCATCCTCTGGGCTTaGGCTTGGTTGTTACAAGTC +
Preference number: 5 (lower is better)
Translates to: FFPYWCCMLPSHPHAFFCSILWA*AWLLQV
Trigger: GACTTGTAACAACCAAGCCAAAGCCCAGAGGATGGA...GCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTACCAGGGAGGCTTTGTaGAGAGAGCAAGGTATAGGC +
Preference number: 5 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTTREAL*REQGIG
Trigger: GCCTATACCTTGCTCTCTCAACAAAGCCTCCCTGGT...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS-3UTR CAA 90 bp CACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTGTCTCTCCCTTCTTGACTTCCTaGAAGCCACTTTCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: HLPSSERCYALQPLNTVSPFLTS*KPLSFN
Trigger: GTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG...AGAGACAGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CCAGATCCAGGCTTTCTCCTGTGTCTAATAGGTGTCAACTCTAAGTTATTAGGCGAAACTCACTGCTGTTaGACTCCTGCCTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: PDPGFLLCLIGVNSKLLGETHCC*TPASTA
Trigger: TGCAGTGGAGGCAGGAGTCAAACAGCAGTGAGTTTC...GCCTAATAACTTAGAGTTGACACCTATTAGACACAGGAGAAAGCCTGGATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTGACTTCTCCATCTCTGGGATCTaGTCTCACCAGGCATCTCTT +
Preference number: 5 (lower is better)
Translates to: LVLESPTPIRTYGLPCDFSISGI*SHQASL
Trigger: AAGAGATGCCTGGTGAGACAAGATCCCAGAGATGGA...GAAGTCACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp AGCCCATTAGTGCTGGAATCTCCTACTCCCATAAGAACCTATGGACTCCCTTGTTCCTCTTCCTTCGTCTaGGTCATAGGAAGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: SPLVLESPTPIRTYGLPCSSSFV*VIGSGV
Trigger: AACACCACTTCCTATGACCAAGACGAAGGAAGAGGA...ACAAGGGAGTCCATAGGTTCTTATGGGAGTAGGAGATTCCAGCACTAATGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACAAGAGGGACAGTGACTaGCCTGGGTTCACAGAGCCC +
Preference number: 5 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHKRDSD*PGFTEP
Trigger: GGGCTCTGTGAACCCAGGCAAGTCACTGTCCCTCTT...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp AATGGTTATCATGGGGCATATAACCACTGTTGGGGAACTTTGCTTCTAGAGATAAAGAGGGACAGTGACTaGCCTGGGTTCACAGAGCCC +
Preference number: 5 (lower is better)
Translates to: NGYHGAYNHCWGTLLLEIKRDSD*PGFTEP
Trigger: GGGCTCTGTGAACCCAGGCAAGTCACTGTCCCTCTT...TATCTCTAGAAGCAAAGTTCCCCAACAGTGGTTATATGCCCCATGATAACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp GAAGCCAGTCTGGAGGATAGGTGGATACAAAGCACTTTGAAATTAGTTATTTCTAAAGGCCTGTGCCAGTaGCTGACAGTGTCTGTCCCG +
Preference number: 5 (lower is better)
Translates to: EASLEDRWIQSTLKLVISKGLCQ*LTVSVP
Trigger: CGGGACAGACACTGTCAGCAACTGGCACAGGCCTTT...AGAAATAACTAATTTCAAAGTGCTTTGTATCCACCTATCCTCCAGACTGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CCTTTCTCCTCTAAAGGGCAGACATTTGATTCTGTGATTTTCCCCAGGGATCCTTCCTCTTCCTTCGTCTaGGTCATAGGAAGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: PFSSKGQTFDSVIFPRDPSSSFV*VIGSGV
Trigger: AACACCACTTCCTATGACCAAGACGAAGGAAGAGGA...AGGATCCCTGGGGAAAATCACAGAATCAAATGTCTGCCCTTTAGAGGAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCCTCTGAACACTAACTTCCACAGGTTCTaGTTCCCTGAAACTCTAGGA +
Preference number: 5 (lower is better)
Translates to: HLHLPSSERCYALQPLNTNFHRF*FPETLG
Trigger: TCCTAGAGTTTCAGGGAACAAGAACCTGTGGAAGTT...AGTGTTCAGAGGCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTCTTGTACTCCAACCCCTGCCCCTACGTCTGCTACTGTACCTCATTAGAGACTTCCTCATGCCTTCTTTaGCTTAGTTTTCCTGATCTT +
Preference number: 5 (lower is better)
Translates to: LLYSNPCPYVCYCTSLETSSCLL*LSFPDL
Trigger: AAGATCAGGAAAACTAAGCAAAAGAAGGCATGAGGA...AGTCTCTAATGAGGTACAGTAGCAGACGTAGGGGCAGGGGTTGGAGTACAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CCCACATTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTCCCACTCTATCCTTCTaGAAACTTCCTCCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PTFTDFDPWPTVFSTSSTPTLSF*KLPPFL
Trigger: CAAGAAGGGAGGAAGTTTCAAGAAGGATAGAGTGGG...AGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAATGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTAACTTCCACAGGTTCTaGTTCCCTGAAACTCTAGGA +
Preference number: 5 (lower is better)
Translates to: HFLSLLVLYAPFTSSCLLNFHRF*FPETLG
Trigger: TCCTAGAGTTTCAGGGAACAAGAACCTGTGGAAGTT...AAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CCCTTCTTGACTTCCTTGAAGCCACTTTCCTTCAACAGGCAGCTTGAATGTGAGGAGACTTCTCTTCCTTaGACTGCTCCCTTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: PFLTSLKPLSFNRQLECEETSLP*TAPFFN
Trigger: ATTGAAAAAGGGAGCAGTCAAAGGAAGAGAAGTCTC...CTCACATTCAAGCTGCCTGTTGAAGGAAAGTGGCTTCAAGGAAGTCAAGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CAAGCACTTATCACCTTCACTTGCCCTCATCTGAAAGATGTTATGCTCTGCAGCGAGACTTCTCTTCCTTaGACTGCTCCCTTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: QALITFTCPHLKDVMLCSETSLP*TAPFFN
Trigger: ATTGAAAAAGGGAGCAGTCAAAGGAAGAGAAGTCTC...GCTGCAGAGCATAACATCTTTCAGATGAGGGCAAGTGAAGGTGATAAGTGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTTTGCTTAGTTTTCCTGAAAAGATTGTTCACTaGAGCACCAAACTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LVLYAPFTSSCLLLLSFPEKIVH*STKLLS
Trigger: AGAGAGGAGTTTGGTGCTCAAGTGAACAATCTTTTC...AGGAAAACTAAGCAAAAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CTTCCTTTGACTGCTCCCTTTTTCAATCTGTCATTTGCCTCCTGGCATCACTTTGAAAAGATTGTTCACTaGAGCACCAAACTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LPLTAPFFNLSFASWHHFEKIVH*STKLLS
Trigger: AGAGAGGAGTTTGGTGCTCAAGTGAACAATCTTTTC...AAAGTGATGCCAGGAGGCAAATGACAGATTGAAAAAGGGAGCAGTCAAAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp CACTTTCTTTCCCTATTGGTGCTGTATGCTCCCTTCACATCCTCATGCCTTCTTAACTCCCTCTGGATATaGTCTGACTTTACTTTTGTA +
Preference number: 5 (lower is better)
Translates to: HFLSLLVLYAPFTSSCLLNSLWI*SDFTFV
Trigger: TACAAAAGTAAAGTCAGACAATATCCAGAGGGAGTT...AAGAAGGCATGAGGATGTGAAGGGAGCATACAGCACCAATAGGGAAAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS-3UTR CAA 90 bp TTCACTGATTTTGATCCTTGGCCCACAGTTTTCTCTACTTCAAGCACTTATCACTACAAAAGTACTTCCTaGACTCCACAACTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: FTDFDPWPTVFSTSSTYHYKSTS*TPQLPL
Trigger: CAGAGGGAGTTGTGGAGTCAAGGAAGTACTTTTGTA...GTGATAAGTGCTTGAAGTAGAGAAAACTGTGGGCCAAGGATCAAAATCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388950.8
ENST00000423537.7
CDS CCA 72 bp AACTTCGCAAAGGAGCTCTGGCATGACCTGGGGAAGTaGGTAGGGACAAGGGGTCTAGGGCCAATGAGGGAG +
Preference number: 6 (lower is better)
Translates to: NFAKELWHDLGK*VGTRGLGPMRE
Trigger: CTCCCTCATTGGCCCTAGACCCCTTGTCCCTACCCACTTCCCCAGGTCATGCCAGAGCTCCTTTGCGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388950.8
ENST00000423537.7
ENST00000472182.1
CDS GCA 72 bp GGCTTTGTTGAGAGAGCAAGGTATAGGCAGTCACAATaGAGGTGGGCGGGAGCCAGGATTCCACTAGAGGAG +
Preference number: 6 (lower is better)
Translates to: GFVERARYRQSQ*RWAGARIPLEE
Trigger: CTCCTCTAGTGGAATCCTGGCTCCCGCCCACCTGCATTGTGACTGCCTATACCTTGCTCTCTCAACAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS CAA 72 bp GTAGTGCCAGTGCCCCCTTACACCAGGGAGGCTTTGTaGAGAGAGCAAGGTATAGGCAGTCACAATGCAGGT +
Preference number: 6 (lower is better)
Translates to: VVPVPPYTREAL*REQGIGSHNAG
Trigger: ACCTGCATTGTGACTGCCTATACCTTGCTCTCTCAACAAAGCCTCCCTGGTGTAAGGGGGCACTGGCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388950.8
CDS CAA 90 bp AAGTCCTTAGGTCAAGACCTTGACTTAGGATGGCAGGGGGAGGTGTaGATCCTCAGGGAGGAAAGGCTCTTGGTTGTGGATGTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: KSLGQDLDLGWQGEV*ILREERLLVVDVPQ
Trigger: CTGAGGCACATCCACAACCAAGAGCCTTTCCTCCCTGAGGATCAACACCTCCCCCTGCCATCCTAAGTCAAGGTCTTGACCTAAGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
ENST00000472182.1
CDS TCA 72 bp GCTGTGTTACCTAGTTGGTGTCCAGGTTGGGCTGTGTaGGCAGTGCTGTCACTGGCATCTACTCCCTTTTCA +
Preference number: 6 (lower is better)
Translates to: AVLPSWCPGWAV*AVLSLASTPFS
Trigger: TGAAAAGGGAGTAGATGCCAGTGACAGCACTGCTCACACAGCCCAACCTGGACACCAACTAGGTAACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS GCA 72 bp TACCTAGTTGGTGTCCAGGTTGGGCTGTGTGAGCAGTaGTGTCACTGGCATCTACTCCCTTTTCAACCTCTC +
Preference number: 6 (lower is better)
Translates to: YLVGVQVGLCEQ*CHWHLLPFQPL
Trigger: GAGAGGTTGAAAAGGGAGTAGATGCCAGTGACAGCACTGCTCACACAGCCCAACCTGGACACCAACTAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS CCA 72 bp CCTGCTTCTTCCTCCTGCTTTTCGGTTGTGTCCACTTaGACCTGGGATGAAGGGCCTGAAAGACAGTGTTCT +
Preference number: 6 (lower is better)
Translates to: PASSSCFSVVST*TWDEGPERQCS
Trigger: AGAACACTGTCTTTCAGGCCCTTCATCCCAGGTCCAAGTGGACACAACCGAAAAGCAGGAGGAAGAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS CAA 90 bp CTACTCCCTTTTCAACCTCTCCTGCTTCTTCCTCCTGCTTTTCGGTaGTGTCCACTTGGACCTGGGATGAAGGGCCTGAAAGACAGTGTT +
Preference number: 6 (lower is better)
Translates to: LLPFQPLLLLPPAFR*CPLGPGMKGLKDSV
Trigger: AACACTGTCTTTCAGGCCCTTCATCCCAGGTCCAAGTGGACACAACCGAAAAGCAGGAGGAAGAAGCAGGAGAGGTTGAAAAGGGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS CCA 72 bp TGTTACAAGTCCTTAGGTCAAGACCTTGACTTAGGATaGCAGGGGGAGGTGTTGATCCTCAGGGAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: CYKSLGQDLDLG*QGEVLILREER
Trigger: CCTTTCCTCCCTGAGGATCAACACCTCCCCCTGCCATCCTAAGTCAAGGTCTTGACCTAAGGACTTGTAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
ENST00000472182.1
CDS CCA 72 bp CTCAGATTCAGAGAGATGGGTAGACCTCCTTGTCCATaGGACCTCATTGGAAGAAGACTCAGAGGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: LRFREMGRPPCP*DLIGRRLRGEV
Trigger: GACCTCTCCTCTGAGTCTTCTTCCAATGAGGTCCCATGGACAAGGAGGTCTACCCATCTCTCTGAATCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS CCA 72 bp TCCGGTGCTCTCTCAACAAGTGTCCACAAAAGCATCTaGACTCATCCCCAATCCGGAAACAGTCCCATAGGT +
Preference number: 6 (lower is better)
Translates to: SGALSTSVHKSI*THPQSGNSPIG
Trigger: ACCTATGGGACTGTTTCCGGATTGGGGATGAGTCCAGATGCTTTTGTGGACACTTGTTGAGAGAGCACCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS CAA 72 bp GAGAGATGGGTAGACCTCCTTGTCCATGGGACCTCATaGGAAGAAGACTCAGAGGAGAGGTCTTCCTTCAGA +
Preference number: 6 (lower is better)
Translates to: ERWVDLLVHGTS*EEDSEERSSFR
Trigger: TCTGAAGGAAGACCTCTCCTCTGAGTCTTCTTCCAATGAGGTCCCATGGACAAGGAGGTCTACCCATCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS TCA 72 bp TTGGCTTGGTTGTTACAAGTCCTTAGGTCAAGACCTTaGCTTAGGATGGCAGGGGGAGGTGTTGATCCTCAG +
Preference number: 6 (lower is better)
Translates to: LAWLLQVLRSRP*LRMAGGGVDPQ
Trigger: CTGAGGATCAACACCTCCCCCTGCCATCCTAAGTCAAGGTCTTGACCTAAGGACTTGTAACAACCAAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
ENST00000472182.1
CDS CCA 72 bp TCAGAGGTGGAAGGCTTCAAGAAGCTTTCAGAGATATaGTTCTCCTGTAAGTCCTCAGCAGAGGGGTCCTTT +
Preference number: 6 (lower is better)
Translates to: SEVEGFKKLSEI*FSCKSSAEGSF
Trigger: AAAGGACCCCTCTGCTGAGGACTTACAGGAGAACCATATCTCTGAAAGCTTCTTGAAGCCTTCCACCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
ENST00000472182.1
CDS CCA 72 bp ATTCAGAGGTATGGGGCTCTAACGGGGTCTCAGAGGTaGAAGGCTTCAAGAAGCTTTCAGAGATATGGTTCT +
Preference number: 6 (lower is better)
Translates to: IQRYGALTGSQR*KASRSFQRYGS
Trigger: AGAACCATATCTCTGAAAGCTTCTTGAAGCCTTCCACCTCTGAGACCCCGTTAGAGCCCCATACCTCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
ENST00000472182.1
CDS CAA 90 bp TCAGATTCAGAGAGATGGGTAGACCTCCTTGTCCATGGGACCTCATaGGAAGAAGACTCAGAGGAGAGGTCTTCCTTCAGAGTATCAGAA +
Preference number: 6 (lower is better)
Translates to: SDSERWVDLLVHGTS*EEDSEERSSFRVSE
Trigger: TTCTGATACTCTGAAGGAAGACCTCTCCTCTGAGTCTTCTTCCAATGAGGTCCCATGGACAAGGAGGTCTACCCATCTCTCTGAATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7
CDS TCA 72 bp CAGAGTATCAGAAGAAGACAGACAGACATAGTCTCGTaGTTGGGGAGGAAGAGTAAGGTGTTTCTCTGGCAC +
Preference number: 6 (lower is better)
Translates to: QSIRRRQTDIVS*LGRKSKVFLWH
Trigger: GTGCCAGAGAAACACCTTACTCTTCCTCCCCAATCACGAGACTATGTCTGTCTGTCTTCTTCTGATACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377984.2
ENST00000388950.8
ENST00000423537.7