RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM219B (Homo sapiens)

Ensembl gene IDs: ENSG00000178761

Ensembl transcript IDs: ENST00000357635.10, ENST00000562698.5, ENST00000563069.5, ENST00000563119.5, ENST00000563413.5, ENST00000563671.5, ENST00000563706.5, ENST00000563877.5, ENST00000564019.1, ENST00000564857.1, ENST00000565772.5, ENST00000566132.5, ENST00000566194.5, ENST00000566894.1, ENST00000567388.5, ENST00000569524.5, ENST00000569761.1, ENST00000570143.5

Found 698 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTTaGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGAGTCCCCAA +
Preference number: 1 (lower is better)
Translates to: WPTGLCRPHGEQGPP*RVMSTGGYRKKSPQ
Trigger: TTGGGGACTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
3UTR GCA 90 bp GAACCTATACCCCAATCCCGACTATTGGGCTGGGAACCCTGTCTATaGCCATTCAAAGCTCACCATGTGGGAGGACTGCTTGGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: EPIPQSRLLGWEPCL*PFKAHHVGGLLGPG
Trigger: CCCAGGCCCAAGCAGTCCTCCCACATGGTGAGCTTTGAATGGGCATAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGGGTATAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR TCA 90 bp GGTCACTTTCTAGGGGTCAGTGACTTCAGTGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGC +
Preference number: 1 (lower is better)
Translates to: GHFLGVSDFSAHCTV*AMSGQQGSVGLMVS
Trigger: GCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR CCA 90 bp GGCAATAGAATGGTCCATGCTGGAGTGAAGGGAGGCCCTCTACACTaGTGGACTGATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGG +
Preference number: 1 (lower is better)
Translates to: GNRMVHAGVKGGPLH*WTDFLRQGSRSWLR
Trigger: CCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCCCTTCACTCCAGCATGGACCATTCTATTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 90 bp ACTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGTCACTTTCT +
Preference number: 1 (lower is better)
Translates to: TTEFYLSAHSPDGGL*PEKQQVRATCRSLS
Trigger: AGAAAGTGACCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR GCA 90 bp GTGGCCACTGGCCCTAAACAACTGACCATTTCTACCCTGCCTCACTaGACTGTCCCACCAGGTCCCTCCAGCTTTTTCTACAAGGTAACA +
Preference number: 1 (lower is better)
Translates to: VATGPKQLTISTLPH*TVPPGPSSFFYKVT
Trigger: TGTTACCTTGTAGAAAAAGCTGGAGGGACCTGGTGGGACAGTGCAGTGAGGCAGGGTAGAAATGGTCAGTTGTTTAGGGCCAGTGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 90 bp AATAGAATGGTCCATGCTGGAGTGAAGGGAGGCCCTCTACACTGGTaGACTGATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCT +
Preference number: 1 (lower is better)
Translates to: NRMVHAGVKGGPLHW*TDFLRQGSRSWLRS
Trigger: AGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCCCTTCACTCCAGCATGGACCATTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR TCA 90 bp TGCTGTGACCAGAAGAATCTGGCAATAGAATGGTCCATGCTGGAGTaGAGGGAGGCCCTCTACACTGGTGGACTGATTTCCTCAGGCAAG +
Preference number: 1 (lower is better)
Translates to: CCDQKNLAIEWSMLE*REALYTGGLISSGK
Trigger: CTTGCCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCCCTTCACTCCAGCATGGACCATTCTATTGCCAGATTCTTCTGGTCACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR TCA 90 bp GAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTAAAGCCCAATCCTaGGTATCCAGTAAGGCCCATGCTGTGACCAGAAGAATCTGGCAA +
Preference number: 1 (lower is better)
Translates to: ERGCVTPRGLLKAQS*VSSKAHAVTRRIWQ
Trigger: TTGCCAGATTCTTCTGGTCACAGCATGGGCCTTACTGGATACTCAGGATTGGGCTTTAAGCAGACCTCTGGGTGTGACACAGCCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 90 bp CAGTTGGGGATGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCTGCTATGATCCCTGTCATAGTTAGA +
Preference number: 1 (lower is better)
Translates to: QLGMPQVQGFWKPGS*CIIKQPAMIPVIVR
Trigger: TCTAACTATGACAGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCATCCCCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
3UTR CCA 90 bp TCACCTGCAGAACACACAGCACTCAGAATTAAGGCAGTTTGGCCCTaGGCACATTGGTGGTATTTTGGTATGTGGCCACTGGCCCTAAAC +
Preference number: 1 (lower is better)
Translates to: SPAEHTALRIKAVWP*AHWWYFGMWPLALN
Trigger: GTTTAGGGCCAGTGGCCACATACCAAAATACCACCAATGTGCCCAGGGCCAAACTGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 90 bp AAACTGTCACCTGCAGAACACACAGCACTCAGAATTAAGGCAGTTTaGCCCTGGGCACATTGGTGGTATTTTGGTATGTGGCCACTGGCC +
Preference number: 1 (lower is better)
Translates to: KLSPAEHTALRIKAV*PWAHWWYFGMWPLA
Trigger: GGCCAGTGGCCACATACCAAAATACCACCAATGTGCCCAGGGCCAAACTGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 90 bp GGGAAGGGGTTCTGGATGGAGATGTTCTTGAGCTCTACAAGCATTTaGACAAAGTGCTCAGAATGTTGGCCACTGCATAGAGCTGCAGAG +
Preference number: 1 (lower is better)
Translates to: GKGFWMEMFLSSTSI*TKCSECWPLHRAAE
Trigger: CTCTGCAGCTCTATGCAGTGGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCAGAACCCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 90 bp ATACTTTCCCATGTAGAACCTATACCCCAATCCCGACTATTGGGCTaGGAACCCTGTCTATGCCCATTCAAAGCTCACCATGTGGGAGGA +
Preference number: 1 (lower is better)
Translates to: ILSHVEPIPQSRLLG*EPCLCPFKAHHVGG
Trigger: TCCTCCCACATGGTGAGCTTTGAATGGGCATAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGGGTATAGGTTCTACATGGGAAAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR TCA 90 bp GTCTGCTTAAAGCCCAATCCTGAGTATCCAGTAAGGCCCATGCTGTaGCCAGAAGAATCTGGCAATAGAATGGTCCATGCTGGAGTGAAG +
Preference number: 1 (lower is better)
Translates to: VCLKPNPEYPVRPML*PEESGNRMVHAGVK
Trigger: CTTCACTCCAGCATGGACCATTCTATTGCCAGATTCTTCTGGTCACAGCATGGGCCTTACTGGATACTCAGGATTGGGCTTTAAGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 90 bp TTCTGGATGGAGATGTTCTTGAGCTCTACAAGCATTTGCACAAAGTaGTCAGAATGTTGGCCACTGCATAGAGCTGCAGAGTCCCATTCC +
Preference number: 1 (lower is better)
Translates to: FWMEMFLSSTSICTK*SECWPLHRAAESHS
Trigger: GGAATGGGACTCTGCAGCTCTATGCAGTGGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 90 bp GCTGTCTTTCTTTACACTGTGCTACATTTGATCCCTTTCCACATGTaGACTTCACCTCTGCAGACACAAGAAAGGCCTGGACATGGTCTC +
Preference number: 1 (lower is better)
Translates to: AVFLYTVLHLIPFHM*TSPLQTQERPGHGL
Trigger: GAGACCATGTCCAGGCCTTTCTTGTGTCTGCAGAGGTGAAGTGCACATGTGGAAAGGGATCAAATGTAGCACAGTGTAAAGAAAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 90 bp TCTCATGCCTCTGGTGGTCACAGGACACTGAGTAAAGCAAGAGACTaGATACTTTCCCATGTAGAACCTATACCCCAATCCCGACTATTG +
Preference number: 1 (lower is better)
Translates to: SHASGGHRTLSKARD*ILSHVEPIPQSRLL
Trigger: CAATAGTCGGGATTGGGGTATAGGTTCTACATGGGAAAGTATCCAGTCTCTTGCTTTACTCAGTGTCCTGTGACCACCAGAGGCATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR TCA 90 bp AGGTGCAACCTGAAGAGGGACAAAAGGACTCACTTTATGCTGTCTTaGAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAG +
Preference number: 1 (lower is better)
Translates to: RCNLKRDKRTHFMLS*RSSLQTILELGRIE
Trigger: CTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTCCTTTTGTCCCTCTTCAGGTTGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp AGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGCCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTA +
Preference number: 2 (lower is better)
Translates to: SPDGGLWPEKQQVRATCRPDGGL*PEKQQV
Trigger: TACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG...CCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp AGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: SPDGGLWPEKQQVRATCRAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...CCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp TTCCACAGCCACCTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTGTTTGGGCTGGGGGCTaGAAGAGGCTGTGTCACACC +
Preference number: 2 (lower is better)
Translates to: FHSHLPAHTGSLYLCCCLVWAGG*KRLCHT
Trigger: GGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAAC...AAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGGTGGCTGTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp TATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGGCCCTGGAATGTACATaGAGGGCCTGTCAGAGTCGA +
Preference number: 2 (lower is better)
Translates to: YEWPTGLCRPHGEQGPPWALECT*RACQSR
Trigger: TCGACTCTGACAGGCCCTTCATGTACATTCCAGGGC...CCAAGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570143.5
3UTR-3UTR CCA 90 bp GGTCCCTCCAGCTTTTTCTACAAGGTAACACCCTCCTACATGGGGTCAGCCAGCGACGGTTGGACCAGTTaGGGATGCCCCAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: GPSSFFYKVTPSYMGSASDGWTS*GCPRSR
Trigger: CCTGGACCTGGGGCATCCCCAACTGGTCCAACCGTC...GCTGGCTGACCCCATGTAGGAGGGTGTTACCTTGTAGAAAAAGCTGGAGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp TGTGTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: CVSYEWPTGLCRPHGEQGAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...GCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000565772.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp TCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGCTTTCTAGGGGTCAGTaGCTTCAGTGCTCACTGCAC +
Preference number: 2 (lower is better)
Translates to: STYQPTAQMGASGLRSNRLSRGQ*LQCSLH
Trigger: GTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAG...CCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CCA 90 bp TATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGTGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: YEWPTGLCRPHGEQGPPWCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...CCAAGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000565772.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CCA 90 bp AAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGACTCACCCGGACGGTTaGACCAGTTGGGGATGCCCC +
Preference number: 2 (lower is better)
Translates to: KGKPESLNSPGRLDQLGMTHPDG*TSWGCP
Trigger: GGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGT...CATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp GGTCCCTCCAGCTTTTTCTACAAGGTAACACCCTCCTACATGGGGTCAGCCAGCTGGTCCATGCTGGAGTaGAGGGAGGCCCTCTACACT +
Preference number: 2 (lower is better)
Translates to: GPSSFFYKVTPSYMGSASWSMLE*REALYT
Trigger: AGTGTAGAGGGCCTCCCTTCACTCCAGCATGGACCA...GCTGGCTGACCCCATGTAGGAGGGTGTTACCTTGTAGAAAAAGCTGGAGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp TTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGTGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: FYLSAHSPDGGLWPEKQQCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...CTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CCA 90 bp TCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGCTATCTAGCACAGCCTaGGCACAAGAGCTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: STYQPTAQMGASGLRSNRLSSTA*AQELPF
Trigger: AAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATAG...CCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CCA 90 bp AGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAGGTCCATGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: RITKLTRTVGPVGDAPGPCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...TGGACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp TATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGCCCTTTTTGCCTCCCTaGAGCACTATGACAAATACC +
Preference number: 2 (lower is better)
Translates to: YEWPTGLCRPHGEQGPPWPFLPP*STMTNT
Trigger: GGTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGG...CCAAGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp GGTGGACTGATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCTCTCTTACTGGTCCATGCTGGAGTaGAGGGAGGCCCTCTACACT +
Preference number: 2 (lower is better)
Translates to: GGLISSGKGLGAGLGLSYWSMLE*REALYT
Trigger: AGTGTAGAGGGCCTCCCTTCACTCCAGCATGGACCA...GTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATCAGTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp GGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCCTGCACTCCAGCCTGGGTaGCAGAGACCCCGGACGGTT +
Preference number: 2 (lower is better)
Translates to: GFWKPGSCCIIKQPAMIPALQPG*QRPRTV
Trigger: AACCGTCCGGGGTCTCTGTCACCCAGGCTGGAGTGC...AGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566132.5
3UTR-3UTR GCA 90 bp TTCCACAGCCACCTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTCAGGTAAGGGCTACCTaGAGGTCACTTTCTAGGGGT +
Preference number: 2 (lower is better)
Translates to: FHSHLPAHTGSLYLCCCLQVRAT*RSLSRG
Trigger: ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTG...AAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGGTGGCTGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR-3UTR CCA 90 bp CCACCTCCCCAACAGAGATGTAGGTCTATACTTACCTTCCACAGCCACCTCCCACCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTA +
Preference number: 2 (lower is better)
Translates to: PPPQQRCRSILTFHSHLPPDGGL*PEKQQV
Trigger: TACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG...TGGGAGGTGGCTGTGGAAGGTAAGTATAGACCTACATCTCTGTTGGGGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR-3UTR CCA 90 bp AAAACTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTCCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTA +
Preference number: 2 (lower is better)
Translates to: KTTEFYLSAHSPDGGLWPPDGGL*PEKQQV
Trigger: TACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG...AGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CCA 90 bp GGTCCCTCCAGCTTTTTCTACAAGGTAACACCCTCCTACATGGGGTCAGCCAGCCCCAAGACCCCAAGCTaGCATGACTCTGGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: GPSSFFYKVTPSYMGSASPKTPS*HDSGLC
Trigger: ACAGAGACCAGAGTCATGCCAGCTTGGGGTCTTGGG...GCTGGCTGACCCCATGTAGGAGGGTGTTACCTTGTAGAAAAAGCTGGAGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp TCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: STYQPTAQMGASGLRSNREGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...CCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CCA 90 bp GGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCCTGAGACCCCGGACGGTTaGACCAGTTGGGGATGCCCC +
Preference number: 2 (lower is better)
Translates to: GFWKPGSCCIIKQPAMIPETPDG*TSWGCP
Trigger: GGGGCATCCCCAACTGGTCCAACCGTCCGGGGTCTC...AGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566132.5
3UTR-3UTR TCA 90 bp GTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: VQVLVIWNLIQVIPILKQALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...CTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp CAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCACTTTCTAGGGGTCAGTaGCTTCAGTGCTCACTGCAC +
Preference number: 2 (lower is better)
Translates to: QTRITKLTRTVGPVGDAPLSRGQ*LQCSLH
Trigger: GTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAG...TGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp AGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGTTGCCCTTATTAAAGTaGCTTCTCCAAACTCTGCTC +
Preference number: 2 (lower is better)
Translates to: SPDGGLWPEKQQVRATCRLPLLK*LLQTLL
Trigger: GAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAA...CCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp CCACCTCCCCAACAGAGATGTAGGTCTATACTTACCTTCCACAGCCACCTCCCAGACCCCAAGCTGGCATaGCTCTGGTCTCTGTCCTAT +
Preference number: 2 (lower is better)
Translates to: PPPQQRCRSILTFHSHLPDPKLA*LWSLSY
Trigger: ATAGGACAGAGACCAGAGTCATGCCAGCTTGGGGTC...TGGGAGGTGGCTGTGGAAGGTAAGTATAGACCTACATCTCTGTTGGGGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp ATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGACACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 2 (lower is better)
Translates to: IWYHSCWEVSLDTPLSSGHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...TCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566132.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTTGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: LVIWNLIQVIPILKQLPACVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...AGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CCA 90 bp ACTAGGGAAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTCCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTA +
Preference number: 2 (lower is better)
Translates to: TREGQTRITKLTRTVGPVPDGGL*PEKQQV
Trigger: TACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG...AACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTTCCCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp TATGTGGCCACTGGCCCTAAACAACTGACCATTTCTACCCTGCCTCACTGCACTCCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTA +
Preference number: 2 (lower is better)
Translates to: YVATGPKQLTISTLPHCTPDGGL*PEKQQV
Trigger: TACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG...AGTGCAGTGAGGCAGGGTAGAAATGGTCAGTTGTTTAGGGCCAGTGGCCACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR-3UTR CCA 90 bp GGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCCTACTCACCCGGACGGTTaGACCAGTTGGGGATGCCCC +
Preference number: 2 (lower is better)
Translates to: GFWKPGSCCIIKQPAMIPTHPDG*TSWGCP
Trigger: GGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGT...AGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp TGCACTTCACCTCTGCAGACACAAGAAAGGCCTGGACATGGTCTCTGCAGATGGTCCCTCTCATGCCTCTaGTGGTCACAGGACACTGAG +
Preference number: 2 (lower is better)
Translates to: CTSPLQTQERPGHGLCRWSLSCL*WSQDTE
Trigger: CTCAGTGTCCTGTGACCACCAGAGGCATGAGAGGGA...CCATCTGCAGAGACCATGTCCAGGCCTTTCTTGTGTCTGCAGAGGTGAAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: PHGEQGPPWRVMSTGGYRHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...CCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp AAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCTTTCTAGGGGTCAGTaGCTTCAGTGCTCACTGCAC +
Preference number: 2 (lower is better)
Translates to: KGKPESLNSPGRLDQLGMLSRGQ*LQCSLH
Trigger: GTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAG...CATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp TATGTGGCCACTGGCCCTAAACAACTGACCATTTCTACCCTGCCTCACTGCACTGACCCCAAGCTGGCATaGCTCTGGTCTCTGTCCTAT +
Preference number: 2 (lower is better)
Translates to: YVATGPKQLTISTLPHCTDPKLA*LWSLSY
Trigger: ATAGGACAGAGACCAGAGTCATGCCAGCTTGGGGTC...AGTGCAGTGAGGCAGGGTAGAAATGGTCAGTTGTTTAGGGCCAGTGGCCACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp AAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 2 (lower is better)
Translates to: KGKPESLNSPGRLDQLGMHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...CATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp CCTGCCTCACTGCACTGTCCCACCAGGTCCCTCCAGCTTTTTCTACAAGGTAACTCACACCCAGAGGTCTaGTTAAAGCCCAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: PASLHCPTRSLQLFLQGNSHPEV*LKPNPE
Trigger: CTCAGGATTGGGCTTTAAGCAGACCTCTGGGTGTGA...GTTACCTTGTAGAAAAAGCTGGAGGGACCTGGTGGGACAGTGCAGTGAGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp TCTGCTGTGATGCTCCTAGCTAGTAGAGTAAGTCAGCCCCCAGATACTGTATATGACGGTTGGACCAGTTaGGGATGCCCCAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: SAVMLLASRVSQPPDTVYDGWTS*GCPRSR
Trigger: CCTGGACCTGGGGCATCCCCAACTGGTCCAACCGTC...ATATACAGTATCTGGGGGCTGACTTACTCTACTAGCTAGGAGCATCACAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp TATGTGGCCACTGGCCCTAAACAACTGACCATTTCTACCCTGCCTCACTGCACTGGAGGCCCTCTACACTaGTGGACTGATTTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: YVATGPKQLTISTLPHCTGGPLH*WTDFLR
Trigger: CCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCC...AGTGCAGTGAGGCAGGGTAGAAATGGTCAGTTGTTTAGGGCCAGTGGCCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTTCTTTACACTGTCATGGTCTCTGCAGATaGGGAAGGGGTTCTGGATGG +
Preference number: 2 (lower is better)
Translates to: LPAHTGSLYLCCCLSLHCHGLCR*GRGSGW
Trigger: CCATCCAGAACCCCTTCCCCATCTGCAGAGACCATG...ACAGTGTAAAGAAAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: HHMVPLLLGGKPGYTPLLEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...GAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566132.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp GATGAGGTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGTGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: DEVQVLVIWNLIQVIPILCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...CAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGACCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566132.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAAGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: QPAMIPVIVRQVQPEEGQALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...TTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp CCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAAAAGGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: PAMIPVIVRQVQPEEGQKALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...CTTTTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp GGGAAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGGACTTCTCCAAACTCTaGTCCAACAGCAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: GKGKPESLNSPGRLDQLGDFSKL*SNSRGK
Trigger: TTTTCCTCTGCTGTTGGAGCAGAGTTTGGAGAAGTC...CCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp GGTGGACTGATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCTCTCTTACTCACACCCAGAGGTCTaGTTAAAGCCCAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: GGLISSGKGLGAGLGLSYSHPEV*LKPNPE
Trigger: CTCAGGATTGGGCTTTAAGCAGACCTCTGGGTGTGA...GTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATCAGTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp TTATGCCTATTTCTGCTGTTTGGGCTGGGGGCTGAAAGAGGCTGTGTCACACCCCTATCTAGCACAGCCTaGGCACAAGAGCTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: LCLFLLFGLGAERGCVTPLSSTA*AQELPF
Trigger: AAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATAG...GGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAGAAATAGGCATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR-3UTR CCA 90 bp ATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGAAAGTGCTCAGAATGTTaGCCACTGCATAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: IWYHSCWEVSLDTPLSSGKCSEC*PLHRAA
Trigger: TGCAGCTCTATGCAGTGGCCAACATTCTGAGCACTT...TCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAGAATTAAGGCACATGGTCTCTGCAGATaGGGAAGGGGTTCTGGATGG +
Preference number: 2 (lower is better)
Translates to: PLLRKLSPAEHTALRIKAHGLCR*GRGSGW
Trigger: CCATCCAGAACCCCTTCCCCATCTGCAGAGACCATG...TGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000563413.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
3UTR-3UTR CCA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000566132.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp TACATAAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCGAAACTGTCACCATGTaGGAGGACTGCTTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: YINTIWYHSCWEVSLDTPETVTM*EDCLGL
Trigger: CAGGCCCAAGCAGTCCTCCCACATGGTGACAGTTTC...GGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566132.5
3UTR-3UTR TCA 90 bp GGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGTTGCCCTTATTAAAGTaGCTTCTCCAAACTCTGCTC +
Preference number: 2 (lower is better)
Translates to: GEQGPPWRVMSTGGYRKKLPLLK*LLQTLL
Trigger: GAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAA...CTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp CTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGTCACTTTCTAGGGGTCTCCCTGAAGCACTATaGCAAATACCAATCAAGCTG +
Preference number: 2 (lower is better)
Translates to: LWPEKQQVRATCRSLSRGLPEAL*QIPIKL
Trigger: CAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAG...ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp TGCACTTCACCTCTGCAGACACAAGAAAGGCCTGGACATGGTCTCTGCAGATGGCCCTTTTTGCCTCCCTaGAGCACTATGACAAATACC +
Preference number: 2 (lower is better)
Translates to: CTSPLQTQERPGHGLCRWPFLPP*STMTNT
Trigger: GGTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGG...CCATCTGCAGAGACCATGTCCAGGCCTTTCTTGTGTCTGCAGAGGTGAAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR-3UTR TCA 90 bp CTGGATACTTTCCCATGTAGAACCTATACCCCAATCCCGACTATTGGGCTGGGATCTACACTGGTGGACTaGTTTCCTCAGGCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: LDTFPCRTYTPIPTIGLGSTLVD*FPQARV
Trigger: GACCCTTGCCTGAGGAAATCAGTCCACCAGTGTAGA...TCCCAGCCCAATAGTCGGGATTGGGGTATAGGTTCTACATGGGAAAGTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp ATGGGGAAGGGGTTCTGGATGGAGATGTTCTTGAGCTCTACAAGCATTTGCACACAGGTCCAGGGATTCTaGAAGCCAGGATCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: MGKGFWMEMFLSSTSICTQVQGF*KPGSCC
Trigger: ACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTG...TGTGCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCAGAACCCCTTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CAGATGGGGAAGGGGTTCTGGATGGAGATGTTCTTGAGCTCTACAAGCATTTGCCAAGGGTCTAGGAGCTaGCTTAGGTCTCTCTTACCC +
Preference number: 2 (lower is better)
Translates to: QMGKGFWMEMFLSSTSICQGSRS*LRSLLP
Trigger: GGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTG...GCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCAGAACCCCTTCCCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CAA 90 bp GACTGGATACTTTCCCATGTAGAACCTATACCCCAATCCCGACTATaGGGCTGGGAACCCTGTCTATGCCCATTCAAAGCTCACCATGTG +
Preference number: 2 (lower is better)
Translates to: DWILSHVEPIPQSRL*GWEPCLCPFKAHHV
Trigger: CACATGGTGAGCTTTGAATGGGCATAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGGGTATAGGTTCTACATGGGAAAGTATCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp GGAGATGTTCTTGAGCTCTACAAGCATTTGCACAAAGTGCTCAGAATGTTGGCCGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: GDVLELYKHLHKVLRMLAAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...GGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR-3UTR TCA 90 bp TATCTCTCTGCTGTGATGCTCCTAGCTAGTAGAGTAAGTCAGCCCCCAGATACTCTTTCTAGGGGTCAGTaGCTTCAGTGCTCACTGCAC +
Preference number: 2 (lower is better)
Translates to: YLSAVMLLASRVSQPPDTLSRGQ*LQCSLH
Trigger: GTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAG...AGTATCTGGGGGCTGACTTACTCTACTAGCTAGGAGCATCACAGCAGAGAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR-3UTR TCA 90 bp TATCTAGCACAGCCTGGGCACAAGAGCTCCCTTTTTGCCTCCCTGAAGCACTATCCCTTTTTGCCTCCCTaGAGCACTATGACAAATACC +
Preference number: 2 (lower is better)
Translates to: YLAQPGHKSSLFASLKHYPFLPP*STMTNT
Trigger: GGTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGG...ATAGTGCTTCAGGGAGGCAAAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAACACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 2 (lower is better)
Translates to: QPAMIPVIVRQVQPEEGQHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...TTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp CCACCTCCCCAACAGAGATGTAGGTCTATACTTACCTTCCACAGCCACCTCCCATGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCT +
Preference number: 2 (lower is better)
Translates to: PPPQQRCRSILTFHSHLPWKPGS*CIIKQP
Trigger: AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCA...TGGGAGGTGGCTGTGGAAGGTAAGTATAGACCTACATCTCTGTTGGGGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp CTGGATACACCCCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAAGCATTTGCACAAAGTaGTCAGAATGTTGGCCACTG +
Preference number: 2 (lower is better)
Translates to: LDTPLSSGNCHLQNTQHSSICTK*SECWPL
Trigger: CAGTGGCCAACATTCTGAGCACTTTGTGCAAATGCT...TGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGGGGTGTATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp ATAGAGCTGCAGAGTCCCATTCCAGAACAGAGTAACCATCTGCCTCTCTTCCCATGTGCACTTCACCTCTaGAGACACAAGAAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: IELQSPIPEQSNHLPLFPCALHL*RHKKGL
Trigger: CAGGCCTTTCTTGTGTCTGCAGAGGTGAAGTGCACA...TGGGAAGAGAGGCAGATGGTTACTCTGTTCTGGAATGGGACTCTGCAGCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp CCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAGAATTAAGGCATGTGCACTTCACCTCTaGAGACACAAGAAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: PLLRKLSPAEHTALRIKACALHL*RHKKGL
Trigger: CAGGCCTTTCTTGTGTCTGCAGAGGTGAAGTGCACA...TGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp CCTGCCTCACTGCACTGTCCCACCAGGTCCCTCCAGCTTTTTCTACAAGGTAACTTATTACAACAACGATaGAGAGGGCCTTGGTTTTGG +
Preference number: 2 (lower is better)
Translates to: PASLHCPTRSLQLFLQGNLLQQR*RGPWFW
Trigger: CCAAAACCAAGGCCCTCTGCATCGTTGTTGTAATAA...GTTACCTTGTAGAAAAAGCTGGAGGGACCTGGTGGGACAGTGCAGTGAGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAAAAGTGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: PAMIPVIVRQVQPEEGQKCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...CTTTTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp ACAGTTGCAGCTGAATATGCCAGAGCTGATTATTACAACAACGATGCAGAGGGCAAAACTGCAGGCTTCTaGGGCCAGCCCCAGTACCTT +
Preference number: 2 (lower is better)
Translates to: TVAAEYARADYYNNDAEGKTAGF*GQPQYL
Trigger: AAGGTACTGGGGCTGGCCCCAGAAGCCTGCAGTTTT...GCCCTCTGCATCGTTGTTGTAATAATCAGCTCTGGCATATTCAGCTGCAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp GAGGAAAACTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 2 (lower is better)
Translates to: EENYRILPISPQPRWGPLQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...CAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAGTTTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp AGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAAGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: SLQTILELGRIEQTEFLEALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...TTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp CATCACTATGAGTCTTCTAACCAAGCCATCCTGGGAAGGGATATTGTTCAGAAGGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: HHYESSNQAILGRDIVQKAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...CTTCTGAACAATATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCATAGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570143.5
3UTR-3UTR TCA 90 bp GGTGGACTGATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCTCTCTTACTTGCCCTTATTAAAGTaGCTTCTCCAAACTCTGCTC +
Preference number: 2 (lower is better)
Translates to: GGLISSGKGLGAGLGLSYLPLLK*LLQTLL
Trigger: GAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAA...GTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATCAGTCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR-3UTR TCA 90 bp GCCTCCCTGAAGCACTATGACAAATACCAATCAAGCTGTCTGCAAGTGTTTTCCCACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 2 (lower is better)
Translates to: ASLKHYDKYQSSCLQVFSHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...GGAAAACACTTGCAGACAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAACTATCTAGCACAGCCTaGGCACAAGAGCTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: QPAMIPVIVRQVQPEEGQLSSTA*AQELPF
Trigger: AAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATAG...TTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CATGCCTCTGGTGGTCACAGGACACTGAGTAAAGCAAGAGACTGGATACTTTCCCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: HASGGHRTLSKARDWILSHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...GGAAAGTATCCAGTCTCTTGCTTTACTCAGTGTCCTGTGACCACCAGAGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569524.5
3UTR-3UTR CCA 90 bp GAGTTCTATAGAGTAGTACATAAACACCATATGGTACCACTCCTGCTGGGAGGTTGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: EFYRVVHKHHMVPLLLGGCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...ACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTACTACTCTATAGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566132.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp CTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTGGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: LQTILELGRIEQTEFLELAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...CAGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp TGTCTGCAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATCTTTCTAGGGGTCAGTaGCTTCAGTGCTCACTGCAC +
Preference number: 2 (lower is better)
Translates to: CLQVFSLATFVTHHKNQNLSRGQ*LQCSLH
Trigger: GTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAG...ATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR GCA 90 bp ATAGAGCTGCAGAGTCCCATTCCAGAACAGAGTAACCATCTGCCTCTCTTCCCATGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCT +
Preference number: 2 (lower is better)
Translates to: IELQSPIPEQSNHLPLFPWKPGS*CIIKQP
Trigger: AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCA...TGGGAAGAGAGGCAGATGGTTACTCTGTTCTGGAATGGGACTCTGCAGCTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp CTGCCTCACTGCACTGTCCCACCAGGTCCCTCCAGCTTTTTCTACAAGGTAACAAGCTCTACAAGCATTTaGACAAAGTGCTCAGAATGT +
Preference number: 2 (lower is better)
Translates to: LPHCTVPPGPSSFFYKVTSSTSI*TKCSEC
Trigger: ACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCT...TGTTACCTTGTAGAAAAAGCTGGAGGGACCTGGTGGGACAGTGCAGTGAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CTGAGTAAAGCAAGAGACTGGATACTTTCCCATGTAGAACCTATACCCCAATCCGGCCCTCTACACTGGTaGACTGATTTCCTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: LSKARDWILSHVEPIPQSGPLHW*TDFLRQ
Trigger: TTGCCTGAGGAAATCAGTCCACCAGTGTAGAGGGCC...GGATTGGGGTATAGGTTCTACATGGGAAAGTATCCAGTCTCTTGCTTTACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTACAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 2 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000566132.5
ENST00000569524.5
3UTR CAA 90 bp GGTCCCTCTACCTGTGTTGCTGTCTTTCTTTACACTGTGCTACATTaGATCCCTTTCCACATGTGCACTTCACCTCTGCAGACACAAGAA +
Preference number: 2 (lower is better)
Translates to: GPSTCVAVFLYTVLH*IPFHMCTSPLQTQE
Trigger: TTCTTGTGTCTGCAGAGGTGAAGTGCACATGTGGAAAGGGATCAAATGTAGCACAGTGTAAAGAAAGACAGCAACACAGGTAGAGGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp ATTTTCTGTCTTGCCCTTATTAAAGTGACTTCTCCAAACTCTGCTCCAACAGCAGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: IFCLALIKVTSPNSAPTAAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...TGCTGTTGGAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAAGACAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAACTCCCTGAAGCACTATaGCAAATACCAATCAAGCTG +
Preference number: 2 (lower is better)
Translates to: QPAMIPVIVRQVQPEEGQLPEAL*QIPIKL
Trigger: CAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAG...TTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp GTCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCAGGTAAGGGCTACCTaGAGGTCACTTTCTAGGGGT +
Preference number: 2 (lower is better)
Translates to: VKPANHLRARKNRANGISQVRAT*RSLSRG
Trigger: ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTG...AGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR GCA 90 bp GCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAAAAGGACTGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCT +
Preference number: 2 (lower is better)
Translates to: AMIPVIVRQVQPEEGQKDWKPGS*CIIKQP
Trigger: AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCA...GTCCTTTTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTTGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: PANHLRARKNRANGISRTCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...AGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CCA 90 bp ACACAGCTGTATACCCACTCTCACGAGTCCATTGCTACTTCTCAAAAGTTTAAAGGAGGCCCTCTACACTaGTGGACTGATTTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: TQLYTHSHESIATSQKFKGGPLH*WTDFLR
Trigger: CCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCC...TTTAAACTTTTGAGAAGTAGCAATGGACTCGTGAGAGTGGGTATACAGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CAA 90 bp CAGGTGCAACCTGAAGAGGGACAAAAGGACTCACTTTATGCTGTCTaGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGA +
Preference number: 2 (lower is better)
Translates to: QVQPEEGQKDSLYAV*KVKPANHLRARKNR
Trigger: TCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTCCTTTTGTCCCTCTTCAGGTTGCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp ACACAGCTGTATACCCACTCTCACGAGTCCATTGCTACTTCTCAAAAGTTTAAATCTACACTGGTGGACTaGTTTCCTCAGGCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: TQLYTHSHESIATSQKFKSTLVD*FPQARV
Trigger: GACCCTTGCCTGAGGAAATCAGTCCACCAGTGTAGA...TTTAAACTTTTGAGAAGTAGCAATGGACTCGTGAGAGTGGGTATACAGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR GCA 90 bp ATTTTCTGTCTTGCCCTTATTAAAGTGACTTCTCCAAACTCTGCTCCAACAGCACAGGTAAGGGCTACCTaGAGGTCACTTTCTAGGGGT +
Preference number: 2 (lower is better)
Translates to: IFCLALIKVTSPNSAPTAQVRAT*RSLSRG
Trigger: ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTG...TGCTGTTGGAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAAGACAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp ATAGTTAGACAGGTGCAACCTGAAGAGGGACAAAAGGACTCACTTTATGCTGTCCTCCCTGAAGCACTATaGCAAATACCAATCAAGCTG +
Preference number: 2 (lower is better)
Translates to: IVRQVQPEEGQKDSLYAVLPEAL*QIPIKL
Trigger: CAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAG...GACAGCATAAAGTGAGTCCTTTTGTCCCTCTTCAGGTTGCACCTGTCTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp AGCCCCCAGATACTGTATATTCCTCTCAACCTTCCATGGTTTGAGAAAAACACACACTTTATGCTGTCTTaGAGGTCAAGCCTGCAAACC +
Preference number: 2 (lower is better)
Translates to: SPQILYIPLNLPWFEKNTHFMLS*RSSLQT
Trigger: GGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTG...TGTGTTTTTCTCAAACCATGGAAGGTTGAGAGGAATATACAGTATCTGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR-3UTR GCA 90 bp ATGGGGAAGGGGTTCTGGATGGAGATGTTCTTGAGCTCTACAAGCATTTGCACAAGCTCTACAAGCATTTaGACAAAGTGCTCAGAATGT +
Preference number: 2 (lower is better)
Translates to: MGKGFWMEMFLSSTSICTSSTSI*TKCSEC
Trigger: ACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCT...TGTGCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCAGAACCCCTTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp AGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAACACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: SLQTILELGRIEQTEFLEHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...TTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR TCA 90 bp TTGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGATTGCCCTTATTAAAGTaGCTTCTCCAAACTCTGCTC +
Preference number: 2 (lower is better)
Translates to: LKVKPANHLRARKNRANGLPLLK*LLQTLL
Trigger: GAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAA...TCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp ATTTTCTGTCTTGCCCTTATTAAAGTGACTTCTCCAAACTCTGCTCCAACAGCACCCTTTTTGCCTCCCTaGAGCACTATGACAAATACC +
Preference number: 2 (lower is better)
Translates to: IFCLALIKVTSPNSAPTAPFLPP*STMTNT
Trigger: GGTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGG...TGCTGTTGGAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAAGACAGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CCA 90 bp ATTGCATTTATTCTTATAAATGTACAGAGCTGTAGAAGTGCAAGCCAAGAGTTCCAGGTCCAGGGATTCTaGAAGCCAGGATCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: IAFILINVQSCRSASQEFQVQGF*KPGSCC
Trigger: ACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTG...GAACTCTTGGCTTGCACTTCTACAGCTCTGTACATTTATAAGAATAAATGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
3UTR-3UTR CCA 90 bp CCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 2 (lower is better)
Translates to: PANHLRARKNRANGISRTQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...AGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CCA 90 bp ATTCTTATAAATGTACAGAGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTATGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: ILINVQSCRSASQEFYRVCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...TACTCTATAGAACTCTTGGCTTGCACTTCTACAGCTCTGTACATTTATAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566132.5
ENST00000569524.5
3UTR-3UTR TCA 90 bp CAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGTTGCCCTTATTAAAGTaGCTTCTCCAAACTCTGCTC +
Preference number: 2 (lower is better)
Translates to: QVFSLATFVTHHKNQNFLLPLLK*LLQTLL
Trigger: GAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAA...CAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR GCA 90 bp AGCTGTATACCCACTCTCACGAGTCCATTGCTACTTCTCAAAAGTTTAAAAAGTGACTTCTCCAAACTCTaGTCCAACAGCAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: SCIPTLTSPLLLLKSLKSDFSKL*SNSRGK
Trigger: TTTTCCTCTGCTGTTGGAGCAGAGTTTGGAGAAGTC...ACTTTTTAAACTTTTGAGAAGTAGCAATGGACTCGTGAGAGTGGGTATACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR-3UTR CCA 90 bp ATTGCATTTATTCTTATAAATGTACAGAGCTGTAGAAGTGCAAGCCAAGAGTTCCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 2 (lower is better)
Translates to: IAFILINVQSCRSASQEFQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...GAACTCTTGGCTTGCACTTCTACAGCTCTGTACATTTATAAGAATAAATGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566132.5
ENST00000569524.5
3UTR CCA 72 bp GTCCATGCTGGAGTGAAGGGAGGCCCTCTACACTGGTaGACTGATTTCCTCAGGCAAGGGTCTAGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: VHAGVKGGPLHW*TDFLRQGSRSW
Trigger: CCAGCTCCTAGACCCTTGCCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCCCTTCACTCCAGCATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp GGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTTaGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAG +
Preference number: 3 (lower is better)
Translates to: GLCRPHGEQGPP*RVMSTGGYRKK
Trigger: CTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
3UTR-3UTR CAA 90 bp ACTAGGGAAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTAACTCACCCGGACGGTaGGACCAGTTGGGGATGCCC +
Preference number: 3 (lower is better)
Translates to: TREGQTRITKLTRTVGPVNSPGR*DQLGMP
Trigger: GGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTT...AACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTTCCCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000569524.5
3UTR TCA 72 bp CTAGGGGTCAGTGACTTCAGTGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTC +
Preference number: 3 (lower is better)
Translates to: LGVSDFSAHCTV*AMSGQQGSVGL
Trigger: GAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGCACTGAAGTCACTGACCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR CCA 72 bp ATGGTCCATGCTGGAGTGAAGGGAGGCCCTCTACACTaGTGGACTGATTTCCTCAGGCAAGGGTCTAGGAGC +
Preference number: 3 (lower is better)
Translates to: MVHAGVKGGPLH*WTDFLRQGSRS
Trigger: GCTCCTAGACCCTTGCCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCCCTTCACTCCAGCATGGACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp TCACCTGCTCTGCAGATGAATACCCGGAGGAGTATCTaGATCCCAGCTCCCCATCACTGTCAGAGTCGAGGG +
Preference number: 3 (lower is better)
Translates to: SPALQMNTRRSI*IPAPHHCQSRG
Trigger: CCCTCGACTCTGACAGTGATGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563413.5
ENST00000563877.5
ENST00000569524.5
3UTR GCA 72 bp TGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTaGTTAAAGCCCAATCCTGAGTATCCAGTAAGGCCC +
Preference number: 3 (lower is better)
Translates to: WGLKEAVSHPEV*LKPNPEYPVRP
Trigger: GGGCCTTACTGGATACTCAGGATTGGGCTTTAAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 72 bp CCCCAATCCCGACTATTGGGCTGGGAACCCTGTCTATaGCCATTCAAAGCTCACCATGTGGGAGGACTGCTT +
Preference number: 3 (lower is better)
Translates to: PQSRLLGWEPCL*PFKAHHVGGLL
Trigger: AAGCAGTCCTCCCACATGGTGAGCTTTGAATGGGCATAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CAA 90 bp CTTTACACTGTGCTACATTTGATCCCTTTCCACATGTGCACTTCACCTCTGCAGGGACGGTTGGACCAGTaGGGGATGCCCCAGGTCCAG +
Preference number: 3 (lower is better)
Translates to: LYTVLHLIPFHMCTSPLQGRLDQ*GMPQVQ
Trigger: CTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCC...CTGCAGAGGTGAAGTGCACATGTGGAAAGGGATCAAATGTAGCACAGTGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CAA 90 bp GGTGGACTGATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCTCTCTTACGCCTATTTCTGCTGTTaGGGCTGGGGGCTGAAAGAG +
Preference number: 3 (lower is better)
Translates to: GGLISSGKGLGAGLGLSYAYFCC*GWGLKE
Trigger: CTCTTTCAGCCCCCAGCCCAAACAGCAGAAATAGGC...GTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATCAGTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 72 bp CCTCTGCAGACACAAGAAAGGCCTGGACATGGTCTCTaGAGATGGGGAAGGGGTTCTGGATGGAGATGTTCT +
Preference number: 3 (lower is better)
Translates to: PLQTQERPGHGL*RWGRGSGWRCS
Trigger: AGAACATCTCCATCCAGAACCCCTTCCCCATCTGCAGAGACCATGTCCAGGCCTTTCTTGTGTCTGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 72 bp GGCCCTAAACAACTGACCATTTCTACCCTGCCTCACTaGACTGTCCCACCAGGTCCCTCCAGCTTTTTCTAC +
Preference number: 3 (lower is better)
Translates to: GPKQLTISTLPH*TVPPGPSSFFY
Trigger: GTAGAAAAAGCTGGAGGGACCTGGTGGGACAGTGCAGTGAGGCAGGGTAGAAATGGTCAGTTGTTTAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 72 bp ATGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCTGCTATGATCCCTGTC +
Preference number: 3 (lower is better)
Translates to: MPQVQGFWKPGS*CIIKQPAMIPV
Trigger: GACAGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
3UTR CCA 72 bp TGGTGGACTGATTTCCTCAGGCAAGGGTCTAGGAGCTaGCTTAGGTCTCTCTTACCCTTCCTGTCTGTAAGC +
Preference number: 3 (lower is better)
Translates to: WWTDFLRQGSRS*LRSLLPFLSVS
Trigger: GCTTACAGACAGGAAGGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATCAGTCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp CACAGCAGAAATTATGCCTATTTCTGCTGTTTGGGCTaGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTC +
Preference number: 3 (lower is better)
Translates to: HSRNYAYFCCLG*GLKEAVSHPEV
Trigger: GACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAGAAATAGGCATAATTTCTGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp TCCTGGGAAGGGATATTGTTCAGAAGAGAACGGCCCTaGAATGTACATGAAGGGCCTGTCAGAGTCGAGGGA +
Preference number: 3 (lower is better)
Translates to: SWEGILFRRERP*NVHEGPVRVEG
Trigger: TCCCTCGACTCTGACAGGCCCTTCATGTACATTCCAGGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570143.5
3UTR-3UTR CAA 90 bp CCACCTCCCCAACAGAGATGTAGGTCTATACTTACCTTCCACAGCCACCTCCCAGTCCCTCTACCTGTGTaGCTGTCTTTCTTTACACTG +
Preference number: 3 (lower is better)
Translates to: PPPQQRCRSILTFHSHLPVPLPV*LSFFTL
Trigger: CAGTGTAAAGAAAGACAGCAACACAGGTAGAGGGAC...TGGGAGGTGGCTGTGGAAGGTAAGTATAGACCTACATCTCTGTTGGGGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR TCA 72 bp CAGAAGAATCTGGCAATAGAATGGTCCATGCTGGAGTaGAGGGAGGCCCTCTACACTGGTGGACTGATTTCC +
Preference number: 3 (lower is better)
Translates to: QKNLAIEWSMLE*REALYTGGLIS
Trigger: GGAAATCAGTCCACCAGTGTAGAGGGCCTCCCTTCACTCCAGCATGGACCATTCTATTGCCAGATTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR TCA 72 bp TGTGTCACACCCAGAGGTCTGCTTAAAGCCCAATCCTaGGTATCCAGTAAGGCCCATGCTGTGACCAGAAGA +
Preference number: 3 (lower is better)
Translates to: CVTPRGLLKAQS*VSSKAHAVTRR
Trigger: TCTTCTGGTCACAGCATGGGCCTTACTGGATACTCAGGATTGGGCTTTAAGCAGACCTCTGGGTGTGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp GCACTCAGAATTAAGGCAGTTTGGCCCTGGGCACATTaGTGGTATTTTGGTATGTGGCCACTGGCCCTAAAC +
Preference number: 3 (lower is better)
Translates to: ALRIKAVWPWAH*WYFGMWPLALN
Trigger: GTTTAGGGCCAGTGGCCACATACCAAAATACCACCAATGTGCCCAGGGCCAAACTGCCTTAATTCTGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp GGGCCTGTCAGAGTCGAGGGACACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGTATAGCCCTTGTTAAA +
Preference number: 3 (lower is better)
Translates to: GPVRVEGHQVFI*TLAKSSIALVK
Trigger: TTTAACAAGGGCTATACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570143.5
3UTR CCA 72 bp CTCCCCATCACTATGAGTCTTCTAACCAAGCCATCCTaGGAAGGGATATTGTTCAGAAGAGAACGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: LPITMSLLTKPS*EGILFRRERPW
Trigger: CCAGGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCATAGTGATGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570143.5
3UTR-3UTR CAA 90 bp CCACCTCCCCAACAGAGATGTAGGTCTATACTTACCTTCCACAGCCACCTCCCATGGATGGAGATGTTCTaGAGCTCTACAAGCATTTGC +
Preference number: 3 (lower is better)
Translates to: PPPQQRCRSILTFHSHLPWMEMF*SSTSIC
Trigger: GCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCA...TGGGAGGTGGCTGTGGAAGGTAAGTATAGACCTACATCTCTGTTGGGGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp CATGTAGAACCTATACCCCAATCCCGACTATTGGGCTaGGAACCCTGTCTATGCCCATTCAAAGCTCACCAT +
Preference number: 3 (lower is better)
Translates to: HVEPIPQSRLLG*EPCLCPFKAHH
Trigger: ATGGTGAGCTTTGAATGGGCATAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGGGTATAGGTTCTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp CTCAGAATTAAGGCAGTTTGGCCCTGGGCACATTGGTaGTATTTTGGTATGTGGCCACTGGCCCTAAACAAC +
Preference number: 3 (lower is better)
Translates to: LRIKAVWPWAHW*YFGMWPLALNN
Trigger: GTTGTTTAGGGCCAGTGGCCACATACCAAAATACCACCAATGTGCCCAGGGCCAAACTGCCTTAATTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp CCTGCTGTCAGAGTCGAGGGACACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGTATAGCCCTTGTTAAA +
Preference number: 3 (lower is better)
Translates to: PAVRVEGHQVFI*TLAKSSIALVK
Trigger: TTTAACAAGGGCTATACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569761.1
3UTR TCA 72 bp AAGCCCAATCCTGAGTATCCAGTAAGGCCCATGCTGTaGCCAGAAGAATCTGGCAATAGAATGGTCCATGCT +
Preference number: 3 (lower is better)
Translates to: KPNPEYPVRPML*PEESGNRMVHA
Trigger: AGCATGGACCATTCTATTGCCAGATTCTTCTGGTCACAGCATGGGCCTTACTGGATACTCAGGATTGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 72 bp CAAGCATTTGCACAAAGTGCTCAGAATGTTGGCCACTaGATAGAGCTGCAGAGTCCCATTCCAGAACAGAGT +
Preference number: 3 (lower is better)
Translates to: QAFAQSAQNVGH*IELQSPIPEQS
Trigger: ACTCTGTTCTGGAATGGGACTCTGCAGCTCTATGCAGTGGCCAACATTCTGAGCACTTTGTGCAAATGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CAA 90 bp CCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAGAATTAAGGCATACACTGTGCTACATTaGATCCCTTTCCACATGTGC +
Preference number: 3 (lower is better)
Translates to: PLLRKLSPAEHTALRIKAYTVLH*IPFHMC
Trigger: GCACATGTGGAAAGGGATCAAATGTAGCACAGTGTA...TGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR-3UTR CAA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAATCACTTTATGCTGTCTaGAAGGTCAAGCCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: QPAMIPVIVRQVQPEEGQSLYAV*KVKPAN
Trigger: GTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGA...TTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR-3UTR CAA 90 bp TCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTTCTTTACACTGTGACTCTCACGAGTCCATaGCTACTTCTCAAAAGTTTA +
Preference number: 3 (lower is better)
Translates to: SQHTLGPSTCVAVFLYTVTLTSP*LLLKSL
Trigger: TAAACTTTTGAGAAGTAGCAATGGACTCGTGAGAGT...CACAGTGTAAAGAAAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 72 bp GAGATGTTCTTGAGCTCTACAAGCATTTGCACAAAGTaGTCAGAATGTTGGCCACTGCATAGAGCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: EMFLSSTSICTK*SECWPLHRAAE
Trigger: CTCTGCAGCTCTATGCAGTGGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR GCA 72 bp CTTTACACTGTGCTACATTTGATCCCTTTCCACATGTaGACTTCACCTCTGCAGACACAAGAAAGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: LYTVLHLIPFHM*TSPLQTQERPG
Trigger: TCCAGGCCTTTCTTGTGTCTGCAGAGGTGAAGTGCACATGTGGAAAGGGATCAAATGTAGCACAGTGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp TCTGGTGGTCACAGGACACTGAGTAAAGCAAGAGACTaGATACTTTCCCATGTAGAACCTATACCCCAATCC +
Preference number: 3 (lower is better)
Translates to: SGGHRTLSKARD*ILSHVEPIPQS
Trigger: GGATTGGGGTATAGGTTCTACATGGGAAAGTATCCAGTCTCTTGCTTTACTCAGTGTCCTGTGACCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CCA 72 bp ATCACTGTCAGAGTCGAGGGACACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGTATAGCCCTTGTTAAA +
Preference number: 3 (lower is better)
Translates to: ITVRVEGHQVFI*TLAKSSIALVK
Trigger: TTTAACAAGGGCTATACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563413.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
3UTR TCA 72 bp GCACAAGAGCTCCCTTTTTGCCTCCCTGAAGCACTATaGCAAATACCAATCAAGCTGTCTGCAAGTGTTTTC +
Preference number: 3 (lower is better)
Translates to: AQELPFCLPEAL*QIPIKLSASVF
Trigger: GAAAACACTTGCAGACAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGGAGCTCTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
3UTR TCA 72 bp CTGAAGAGGGACAAAAGGACTCACTTTATGCTGTCTTaGAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGA +
Preference number: 3 (lower is better)
Translates to: LKRDKRTHFMLS*RSSLQTILELG
Trigger: TCCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTCCTTTTGTCCCTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
3UTR GCA 72 bp TTCTGGATGGAGATGTTCTTGAGCTCTACAAGCATTTaGACAAAGTGCTCAGAATGTTGGCCACTGCATAGA +
Preference number: 3 (lower is better)
Translates to: FWMEMFLSSTSI*TKCSECWPLHR
Trigger: TCTATGCAGTGGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp TGTGTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCGCCCTGCCGGATGGTaGAACCCCGCCCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: CVSYEWPTGLCRPHGEQGRPAGW*NPARGE
Trigger: TTCGCCACGGGCGGGGTTGCACCATCCGGCAGGGCG...GCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
CDS-3UTR GCA 90 bp AGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAGGTCCACGCCCTGCCGGATGGTaGAACCCCGCCCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: RITKLTRTVGPVGDAPGPRPAGW*NPARGE
Trigger: TTCGCCACGGGCGGGGTTGCACCATCCGGCAGGGCG...TGGACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGCGCCCTGCCGGATGGTaGAACCCCGCCCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: HGEQGPPWRVMSTGGYRKRPAGW*NPARGE
Trigger: TTCGCCACGGGCGGGGTTGCACCATCCGGCAGGGCG...CTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
CDS-3UTR TCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACCCCGTGGCGAAAGAGTaGCCGGCCGAGGGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHPVAKE*PAEGEA
Trigger: CGCCTCTCCCTCGGCCGGTCACTCTTTCGCCACGGG...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000569761.1
CDS-3UTR GCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACCGCCCTGCCGGATGGTaGAACCCCGCCCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHRPAGW*NPARGE
Trigger: TTCGCCACGGGCGGGGTTGCACCATCCGGCAGGGCG...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000569761.1
CDS-3UTR GCA 90 bp AAGCAGCTGCCGGCTCACATCCTGGTTCACCTGCTGTCAGAGTCGAGGGACACCGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: KQLPAHILVHLLSESRDTALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...GGTGTCCCTCGACTCTGACAGCAGGTGAACCAGGATGTGAGCCGGCAGCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569761.1
CDS-3UTR TCA 90 bp CTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGAAACTGTCACCCGGACGGTTCTGCAGCTTGGCTTaGATGGAGGGTGCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LGGKPGYTPLLRKLSPGRFCSLA*MEGARV
Trigger: GACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAA...CCGTCCGGGTGACAGTTTCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563671.5
CDS-3UTR TCA 90 bp TATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGGTTTGGGCTGGGGGCTaGAAGAGGCTGTGTCACACC +
Preference number: 4 (lower is better)
Translates to: YEWPTGLCRPHGEQGPPWVWAGG*KRLCHT
Trigger: GGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAAC...CCAAGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp CACATCCTGGTTCACCTGCTGTCAGAGTCGAGGGACACCAGGTTTTCATCTGGACCCGTGGCGAAAGAGTaGCCGGCCGAGGGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: HILVHLLSESRDTRFSSGPVAKE*PAEGEA
Trigger: CGCCTCTCCCTCGGCCGGTCACTCTTTCGCCACGGG...TCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGCAGGTGAACCAGGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569761.1
CDS-3UTR GCA 90 bp CACCCAGAGGTCTGCTTAAAGCCCAATCCTGAGTATCCAGTAAGGCCCATGCTGCGCCCTGCCGGATGGTaGAACCCCGCCCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: HPEVCLKPNPEYPVRPMLRPAGW*NPARGE
Trigger: TTCGCCACGGGCGGGGTTGCACCATCCGGCAGGGCG...CAGCATGGGCCTTACTGGATACTCAGGATTGGGCTTTAAGCAGACCTCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR GCA 90 bp CACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: HSPDGGLWPEKQQVRATCGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...GCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp TGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGGCGAGGCCCCCAGCATaGCTTTTCTCCGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: CRPHGEQGPPWRVMSTGGARPPA*LFSAER
Trigger: CCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCTCGC...CCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563069.5
CDS-3UTR CCA 90 bp AGCAGCTGCCGGCTCACATCCTGGTTCACCTGCTGTCAGAGTCGAGGGACACCAGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: SSCRLTSWFTCCQSRGTPAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...TGGTGTCCCTCGACTCTGACAGCAGGTGAACCAGGATGTGAGCCGGCAGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569761.1
CDS-3UTR CCA 90 bp CTCAGGAAACTGTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAGGTCCAGGGTGCTTCTGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: LRKLSPGRLDQLGMPQVQGASAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCAGAAGCACC...CTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGACAGTTTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563671.5
CDS-3UTR CCA 90 bp CTGCTGTTTGGGCTGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTGACGGTTGGACCAGTTaGGGATGCCCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLFGLGAERGCVTPRGLLDGWTS*GCPRSR
Trigger: CCTGGACCTGGGGCATCCCCAACTGGTCCAACCGTC...AAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGACTCACCCGGACGGTTaGACCAGTTGGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: CRPHGEQGPPWRVMSTGGTHPDG*TSWGCP
Trigger: GGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGT...CCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CTGCTGTTTGGGCTGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTACTCACCCGGACGGTTaGACCAGTTGGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: LLFGLGAERGCVTPRGLLTHPDG*TSWGCP
Trigger: GGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGT...AAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTCGATGCAGAGGGCCTTaGTTTTGGGGTCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SYEWPTGLCRPHGEQGPPRCRGP*FWGPAT
Trigger: GGTGGCAGGACCCCAAAACCAAGGCCCTCTGCATCG...AGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
3UTR CAA 72 bp CTCCTCAGGAAACTGTCACCCGGACGGTTGGACCAGTaGGGGATGCCCCAGGTCCAGGGATTCTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LLRKLSPGRLDQ*GMPQVQGFWKP
Trigger: TGGCTTCCAGAATCCCTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGACAGTTTCCTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563671.5
CDS-3UTR TCA 90 bp AGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SYEWPTGLCRPHGEQGPPALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...AGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000565772.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp TTCCACAGCCACCTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: FHSHLPAHTGSLYLCCCLALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...AAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGGTGGCTGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: HGEQGPPWRVMSTGGYRKALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...CTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp TGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGAAACGCGAGGCCCCCAGCATaGCTTTTCTCCGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: WYHSCWEVSLDTPLSSGNARPPA*LFSAER
Trigger: CCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCTCGC...GTTTCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
CDS-3UTR CCA 90 bp TGTGTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: CVSYEWPTGLCRPHGEQGAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...GCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp GGGGTCCTGCCACCCTCACCCCTAGAAGCTGCTAAACACCCAGGCCATTCTGCCGAGCAGGGCCCACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: GVLPPSPLEAAKHPGHSAEQGPP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTC...GGCAGAATGGCCTGGGTGTTTAGCAGCTTCTAGGGGTGAGGGTGGCAGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp AGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAGGTCCAGACGGTTGGACCAGTTaGGGATGCCCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RITKLTRTVGPVGDAPGPDGWTS*GCPRSR
Trigger: CCTGGACCTGGGGCATCCCCAACTGGTCCAACCGTC...TGGACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCGACGGTTGGACCAGTTaGGGATGCCCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HHMVPLLLGGKPGYTPLLDGWTS*GCPRSR
Trigger: CCTGGACCTGGGGCATCCCCAACTGGTCCAACCGTC...GAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCTCCCTCTCATGCCTCTaGTGGTCACAGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: HSPDGGLWPEKQQVRATCSLSCL*WSQDTE
Trigger: CTCAGTGTCCTGTGACCACCAGAGGCATGAGAGGGA...GCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp CCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGTGCAACCCCGCCCGTaGCGAAAGAGTGACCGGCCG +
Preference number: 4 (lower is better)
Translates to: PQVQGFWKPGSCCIIKQPVQPRP*RKSDRP
Trigger: CGGCCGGTCACTCTTTCGCCACGGGCGGGGTTGCAC...AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGTGCAACCCCGCCCGTaGCGAAAGAGTGACCGGCCG +
Preference number: 4 (lower is better)
Translates to: SPRHLESHPGDTHPEAAAVQPRP*RKSDRP
Trigger: CGGCCGGTCACTCTTTCGCCACGGGCGGGGTTGCAC...GGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000569761.1
CDS-3UTR CCA 90 bp CTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAGCGTCTCCCGAAGGCTaGGAGGCCGCTCTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LQNSTYQPTAQMGASGLRASPEG*EAALSE
Trigger: TTCGGAAAGAGCGGCCTCCCAGCCTTCGGGAGACGC...TCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565772.5
CDS-3UTR CCA 90 bp GCAGCTGCCGGCTCACATCCTGGTTCACCTGCTGTCAGAGTCGAGGGACACCAGTGCCGGCTCACATCCTaGTTCACCTGCTGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: AAAGSHPGSPAVRVEGHQCRLTS*FTCCQS
Trigger: ACTCTGACAGCAGGTGAACCAGGATGTGAGCCGGCA...CTGGTGTCCCTCGACTCTGACAGCAGGTGAACCAGGATGTGAGCCGGCAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569761.1
CDS-3UTR CCA 90 bp ATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGAGAGACCCCGGACGGTTaGACCAGTTGGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: IWYHSCWEVSLDTPLSSGETPDG*TSWGCP
Trigger: GGGGCATCCCCAACTGGTCCAACCGTCCGGGGTCTC...TCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566132.5
CDS-3UTR TCA 90 bp AGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGCACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: SPDGGLWPEKQQVRATCRHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...CCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FYLSAHSPDGGLWPEKQQALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...CTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp CCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGTGGTCCATGCTGGAGTaGAGGGAGGCCCTCTACACT +
Preference number: 4 (lower is better)
Translates to: PHGEQGPPWRVMSTGGYRWSMLE*REALYT
Trigger: AGTGTAGAGGGCCTCCCTTCACTCCAGCATGGACCA...CCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR GCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000564019.1
ENST00000566194.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR GCA 90 bp TGTGTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: CVSYEWPTGLCRPHGEQGGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...GCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp ATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGAGCGAGGCCCCCAGCATaGCTTTTCTCCGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: IWYHSCWEVSLDTPLSSGARPPA*LFSAER
Trigger: CCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCTCGC...TCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
CDS-3UTR CCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACGCGCGTCACCATGTATaGCCCCCGCTTTTCCACGGC +
Preference number: 4 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHARHHV*PPLFHG
Trigger: GCCGTGGAAAAGCGGGGGCCATACATGGTGACGCGC...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000564019.1
ENST00000566194.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR CCA 90 bp TCCTGGTTCACCTGCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCGCGCGTCACCATGTATaGCCCCCGCTTTTCCACGGC +
Preference number: 4 (lower is better)
Translates to: SWFTCSADEYPEEYLDPSARHHV*PPLFHG
Trigger: GCCGTGGAAAAGCGGGGGCCATACATGGTGACGCGC...GCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTGAACCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGAGTCCGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: AGPTLEGNVYWRVQEEESAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...GGACTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: PRHLESHPGDTHPEAAAGAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...GCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000564019.1
ENST00000566194.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR CCA 90 bp AACCATCTGCCTCTCTTCCCAAGACCCCAAGCTGGCATGACTCTGGTCTCTGTCTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NHLPLFPRPQAGMTLVSVSAERP*PGPGAS
Trigger: AGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGA...GACAGAGACCAGAGTCATGCCAGCTTGGGGTCTTGGGAAGAGAGGCAGATGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000563119.5
CDS-3UTR CCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHSAERP*PGPGAS
Trigger: AGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGA...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000564019.1
ENST00000566194.5
CDS-3UTR CCA 90 bp AGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGTGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SPDGGLWPEKQQVRATCRCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...CCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CTGCTGTTTGGGCTGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTCCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: LLFGLGAERGCVTPRGLLPDGGL*PEKQQV
Trigger: TACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG...AAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp GGATGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCGACGGTTGGACCAGTTaGGGATGCCCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GCPRSRDSGSQDPAVSLSDGWTS*GCPRSR
Trigger: CCTGGACCTGGGGCATCCCCAACTGGTCCAACCGTC...GCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACACTCACCCGGACGGTTaGACCAGTTGGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHTHPDG*TSWGCP
Trigger: GGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGT...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCGATGCAGAGGGCCTTaGTTTTGGGGTCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: GKPESLNSPGRLDQLGMPRCRGP*FWGPAT
Trigger: GGTGGCAGGACCCCAAAACCAAGGCCCTCTGCATCG...GGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GAGGTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGGTGCAACCCCGCCCGTaGCGAAAGAGTGACCGGCCG +
Preference number: 4 (lower is better)
Translates to: EVQVLVIWNLIQVIPILKVQPRP*RKSDRP
Trigger: CGGCCGGTCACTCTTTCGCCACGGGCGGGGTTGCAC...CTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000569761.1
CDS-3UTR TCA 90 bp CTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGTCACTTTCTAGGGGTTTCTGCAGCTTGGCTTaGATGGAGGGTGCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LWPEKQQVRATCRSLSRGFCSLA*MEGARV
Trigger: GACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAA...ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000563069.5
CDS-3UTR TCA 90 bp AGGCCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: RPHGEQGPPWRVMSTGGYAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...GTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp GGCTGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTAAAGCCCAATTGGTCCATGCTGGAGTaGAGGGAGGCCCTCTACACT +
Preference number: 4 (lower is better)
Translates to: GWGLKEAVSHPEVCLKPNWSMLE*REALYT
Trigger: AGTGTAGAGGGCCTCCCTTCACTCCAGCATGGACCA...ATTGGGCTTTAAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp GTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGCAGGCCATTCTGCCCTaGCCACCTCCCCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: VLVIWNLIQVIPILKQLPQAILP*PPPQQR
Trigger: TCTCTGTTGGGGAGGTGGTCAGGGCAGAATGGCCTG...CGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR TCA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAACCCGTGGCGAAAGAGTaGCCGGCCGAGGGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: QPAMIPVIVRQVQPEEGQPVAKE*PAEGEA
Trigger: CGCCTCTCCCTCGGCCGGTCACTCTTTCGCCACGGG...TTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000569524.5
CDS-3UTR GCA 90 bp AGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: SPRHLESHPGDTHPEAAAALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...GGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000564019.1
ENST00000566194.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR GCA 90 bp CCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: PQVQGFWKPGSCCIIKQPALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: HGEQGPPWRVMSTGGYRKGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...CTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp GCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGAGTCCGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: AGPTLEGNVYWRVQEEESGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...GGACTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp ACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCATCACTAGCGAGGCCCCCAGCATaGCTTTTCTCCGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: TSADEYPEEYLDPSSPSLARPPA*LFSAER
Trigger: CCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCTCGC...TAGTGATGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564019.1
ENST00000567388.5
CDS-3UTR GCA 90 bp AAAACTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGCGAGGCCCCCAGCATaGCTTTTCTCCGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: KTTEFYLSAHSPDGGLWPARPPA*LFSAER
Trigger: CCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCTCGC...AGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
CDS-3UTR GCA 90 bp CATCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTGCGAGGCCCCCAGCATaGCTTTTCTCCGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: HPGSPLQMNTRRSIWIPAARPPA*LFSAER
Trigger: CCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCTCGC...AGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564019.1
ENST00000567388.5
CDS-3UTR GCA 90 bp AACCATCTGCCTCTCTTCCCAAGACCCCAAGCTGGCATGACTCTGGTCTCTGTCTCTACCCTGCCTCACTaGACTGTCCCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: NHLPLFPRPQAGMTLVSVSTLPH*TVPPGP
Trigger: GGGACCTGGTGGGACAGTGCAGTGAGGCAGGGTAGA...GACAGAGACCAGAGTCATGCCAGCTTGGGGTCTTGGGAAGAGAGGCAGATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCATCTACCCTGCCTCACTaGACTGTCCCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QTRITKLTRTVGPVGDAPSTLPH*TVPPGP
Trigger: GGGACCTGGTGGGACAGTGCAGTGAGGCAGGGTAGA...TGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CCACCTCCCCAACAGAGATGTAGGTCTATACTTACCTTCCACAGCCACCTCCCAGCGCGTCACCATGTATaGCCCCCGCTTTTCCACGGC +
Preference number: 4 (lower is better)
Translates to: PPPQQRCRSILTFHSHLPARHHV*PPLFHG
Trigger: GCCGTGGAAAAGCGGGGGCCATACATGGTGACGCGC...TGGGAGGTGGCTGTGGAAGGTAAGTATAGACCTACATCTCTGTTGGGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GATCCCAGCTCCCCATCACTGTCAGAGTCGAGGGACACCAGGTTTTCATCTGGAGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: DPSSPSLSESRDTRFSSGAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...TCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGTGATGGGGAGCTGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563413.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: LVIWNLIQVIPILKQLPAAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...AGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000564019.1
ENST00000566194.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR CCA 90 bp CCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCGGTGCTTCTGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: PGSPLQMNTRRSIWIPAPGASAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCAGAAGCACC...GGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564019.1
ENST00000566194.5
CDS-3UTR CCA 90 bp GTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCATGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VSYEWPTGLCRPHGEQGPCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...TGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000565772.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGACCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: LQNSTYQPTAQMGASGLRPDGGL*PEKQQV
Trigger: TACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG...TCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp AGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGCTATCTAGCACAGCCTaGGCACAAGAGCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: SPDGGLWPEKQQVRATCRLSSTA*AQELPF
Trigger: AAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATAG...CCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp AAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCGACGGTTGGACCAGTTaGGGATGCCCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KHHMVPLLLGGKPGYTPLDGWTS*GCPRSR
Trigger: CCTGGACCTGGGGCATCCCCAACTGGTCCAACCGTC...GAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGGGTCCTGCCACCCTCACCCCTAGAAGCTGCTAAACACCCAGGCCATTCTGCCAGAATTAAGGCAGTTTaGCCCTGGGCACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: GVLPPSPLEAAKHPGHSARIKAV*PWAHWW
Trigger: CCACCAATGTGCCCAGGGCCAAACTGCCTTAATTCT...GGCAGAATGGCCTGGGTGTTTAGCAGCTTCTAGGGGTGAGGGTGGCAGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CTGCTGTTTGGGCTGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTCTTTCTAGGGGTCAGTaGCTTCAGTGCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: LLFGLGAERGCVTPRGLLLSRGQ*LQCSLH
Trigger: GTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAG...AAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp TGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGCTTTCTAGGGGTCAGTaGCTTCAGTGCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: CRPHGEQGPPWRVMSTGGLSRGQ*LQCSLH
Trigger: GTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAG...CCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp GGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGGACCCCAAGCTGGCATaGCTCTGGTCTCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: GEQGPPWRVMSTGGYRKKDPKLA*LWSLSY
Trigger: ATAGGACAGAGACCAGAGTCATGCCAGCTTGGGGTC...CTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR GCA 90 bp TCCCAGCTCCCCATCACTATGAGTCTTCTAACCAAGCCATCCTGGGAAGGGATAGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: SQLPITMSLLTKPSWEGIALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...TATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCATAGTGATGGGGAGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564019.1
ENST00000570143.5
CDS-3UTR GCA 90 bp TCACATCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: SHPGSPLQMNTRRSIWIPALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...TGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564019.1
ENST00000566194.5
ENST00000570143.5
CDS-3UTR GCA 90 bp CCTGCCTCACTGCACTGTCCCACCAGGTCCCTCCAGCTTTTTCTACAAGGTAACGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: PASLHCPTRSLQLFLQGNGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...GTTACCTTGTAGAAAAAGCTGGAGGGACCTGGTGGGACAGTGCAGTGAGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: LVIWNLIQVIPILKQLPAGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...AGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000564019.1
ENST00000566194.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR GCA 90 bp GGGGTCCTGCCACCCTCACCCCTAGAAGCTGCTAAACACCCAGGCCATTCTGCCTGGGAACCCTGTCTATaGCCATTCAAAGCTCACCAT +
Preference number: 4 (lower is better)
Translates to: GVLPPSPLEAAKHPGHSAWEPCL*PFKAHH
Trigger: ATGGTGAGCTTTGAATGGGCATAGACAGGGTTCCCA...GGCAGAATGGCCTGGGTGTTTAGCAGCTTCTAGGGGTGAGGGTGGCAGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp AGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAGGTCCAGTGTTGTCCCTCTCATaGCTCTGGTGGTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: RITKLTRTVGPVGDAPGPVLSLS*LWWSQD
Trigger: GTCCTGTGACCACCAGAGGCATGAGAGGGACAACAC...TGGACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGCCACCTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTTCTTTAGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: SHLPAHTGSLYLCCCLSLAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...TAAAGAAAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCTCTCTTACCCTTCCTGGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: DFLRQGSRSWLRSLLPFLAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...CAGGAAGGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: SPRHLESHPGDTHPEAAAAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...GGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000564019.1
ENST00000566194.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR CCA 90 bp TGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCAGGTGCTTCTGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: WFTSADEYPEEYLDPSSPGASAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCAGAAGCACC...TGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564019.1
ENST00000566194.5
CDS-3UTR CCA 90 bp ATGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAATCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: MPQVQGFWKPGSCCIIKQSAERP*PGPGAS
Trigger: AGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGA...TTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
CDS-3UTR CCA 90 bp GAGGTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EVQVLVIWNLIQVIPILKSAERP*PGPGAS
Trigger: AGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGA...CTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000566194.5
CDS-3UTR CCA 90 bp GGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGGAGCAGGGCCCACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: GEQGPPWRVMSTGGYRKKEQGPP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTC...CTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp ACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAGGTGAGCAGGGCCCACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: TRITKLTRTVGPVGDAPGEQGPP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTC...ACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: CRPHGEQGPPWRVMSTGGCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...CCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp TCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: SWFTSADEYPEEYLDPSSPDGGL*PEKQQV
Trigger: TACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG...GGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570143.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGGACGGTTGGACCAGTTaGGGATGCCCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VQVLVIWNLIQVIPILKQDGWTS*GCPRSR
Trigger: CCTGGACCTGGGGCATCCCCAACTGGTCCAACCGTC...CTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TTCCACAGCCACCTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTAAAACTGCAGGCTTCTaGGGCCAGCCCCAGTACCTT +
Preference number: 4 (lower is better)
Translates to: FHSHLPAHTGSLYLCCCLKTAGF*GQPQYL
Trigger: AAGGTACTGGGGCTGGCCCCAGAAGCCTGCAGTTTT...AAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGGTGGCTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCATGGTCTCTGCAGATaGGGAAGGGGTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: GKPESLNSPGRLDQLGMPHGLCR*GRGSGW
Trigger: CCATCCAGAACCCCTTCCCCATCTGCAGAGACCATG...GGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGATGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCCCTCCCAGCACACACTaGGTCCCTCTACCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: GCPRSRDSGSQDPAVSLSPPSTH*VPLPVL
Trigger: CAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGG...GCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGAGAATTAAGGCAGTTTaGCCCTGGGCACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: STYQPTAQMGASGLRSNRRIKAV*PWAHWW
Trigger: CCACCAATGTGCCCAGGGCCAAACTGCCTTAATTCT...CCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp CTCAGGAAACTGTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAGGTCCAGAGACAGGTGCAACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: LRKLSPGRLDQLGMPQVQRQVQP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTTGCACCTGTCT...CTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGACAGTTTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563671.5
CDS-3UTR CCA 90 bp CCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGTGCCGGCTCACATCCTaGTTCACCTCTGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: PHGEQGPPWRVMSTGGYRCRLTS*FTSADE
Trigger: TTCATCTGCAGAGGTGAACCAGGATGTGAGCCGGCA...CCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566194.5
ENST00000570143.5
CDS-3UTR TCA 90 bp TCACATCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCATTCTGCAGCTTGGCTTaGATGGAGGGTGCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: SHPGSPLQMNTRRSIWIPFCSLA*MEGARV
Trigger: GACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAA...TGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGATGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564019.1
ENST00000566194.5
CDS-3UTR TCA 90 bp AGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAGGTCCACACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: RITKLTRTVGPVGDAPGPHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...TGGACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGAAACTGTCACACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: PLLLGGKPGYTPLLRKLSHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...TGACAGTTTCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR TCA 90 bp AAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KGKPESLNSPGRLDQLGMALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...CATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: LVIWNLIQVIPILKQLPAAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...AGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp TCACCTGCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCATGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: SPALQMNTRRSIWIPAPHAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...ATGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCCTTTCTAGGGGTCAGTaGCTTCAGTGCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: PRHLESHPGDTHPEAAAGLSRGQ*LQCSLH
Trigger: GTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAG...GCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp GTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACACTTTATGCTGTCTTaGAGGTCAAGCCTGCAAACC +
Preference number: 4 (lower is better)
Translates to: VSYEWPTGLCRPHGEQGPHFMLS*RSSLQT
Trigger: GGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTG...TGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGCACTTTATGCTGTCTTaGAGGTCAAGCCTGCAAACC +
Preference number: 4 (lower is better)
Translates to: YEWPTGLCRPHGEQGPPWHFMLS*RSSLQT
Trigger: GGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTG...CCAAGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR TCA 90 bp GATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCTCTCTTACCCTTCCTGTGGTCCATGCTGGAGTaGAGGGAGGCCCTCTACACT +
Preference number: 4 (lower is better)
Translates to: DFLRQGSRSWLRSLLPFLWSMLE*REALYT
Trigger: AGTGTAGAGGGCCTCCCTTCACTCCAGCATGGACCA...CAGGAAGGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp AGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTCTTAAAGCCCAATCCTaGGTATCCAGTAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SYEWPTGLCRPHGEQGPPLKAQS*VSSKAH
Trigger: ATGGGCCTTACTGGATACTCAGGATTGGGCTTTAAG...AGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp CTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGTCACTTTCTAGGGGTGCCCTGGAATGTACATaGAGGGCCTGTCAGAGTCGA +
Preference number: 4 (lower is better)
Translates to: LWPEKQQVRATCRSLSRGALECT*RACQSR
Trigger: TCGACTCTGACAGGCCCTTCATGTACATTCCAGGGC...ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000570143.5
CDS-3UTR TCA 90 bp GGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCATGCCCTGGAATGTACATaGAGGGCCTGTCAGAGTCGA +
Preference number: 4 (lower is better)
Translates to: GSPLQMNTRRSIWIPAPHALECT*RACQSR
Trigger: TCGACTCTGACAGGCCCTTCATGTACATTCCAGGGC...ATGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567388.5
ENST00000570143.5
CDS-3UTR TCA 90 bp TTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCCTGTCGCACTCCAGCCTGGGTaGCAGAGACCCCGGACGGTT +
Preference number: 4 (lower is better)
Translates to: FWKPGSCCIIKQPAMIPVALQPG*QRPRTV
Trigger: AACCGTCCGGGGTCTCTGTCACCCAGGCTGGAGTGC...GACAGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566132.5
CDS-3UTR GCA 90 bp CCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAGAATTAAGGCAGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: PLLRKLSPAEHTALRIKAALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...TGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CTCACATCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: LTSWFTSADEYPEEYLDPGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...GGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGATGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564019.1
ENST00000566194.5
ENST00000570143.5
CDS-3UTR GCA 90 bp GCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGAGTCCCAGGTAAGGGCTACCTaGAGGTCACTTTCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: AGPTLEGNVYWRVQEEESQVRAT*RSLSRG
Trigger: ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTG...GGACTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp AGGCCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACTCACACCCAGAGGTCTaGTTAAAGCCCAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: RPHGEQGPPWRVMSTGGYSHPEV*LKPNPE
Trigger: CTCAGGATTGGGCTTTAAGCAGACCTCTGGGTGTGA...GTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR GCA 90 bp TCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTGGGAACCCTGTCTATaGCCATTCAAAGCTCACCAT +
Preference number: 4 (lower is better)
Translates to: STYQPTAQMGASGLRSNRWEPCL*PFKAHH
Trigger: ATGGTGAGCTTTGAATGGGCATAGACAGGGTTCCCA...CCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp AAGCAGCTGCCGGCTCACATCCTGGTTCACCTGCTGTCAGAGTCGAGGGACACCCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: KQLPAHILVHLLSESRDTHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...GGTGTCCCTCGACTCTGACAGCAGGTGAACCAGGATGTGAGCCGGCAGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569761.1
CDS-3UTR CCA 90 bp TCACCTGCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCATTGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SPALQMNTRRSIWIPAPHCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...ATGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TCCTGGTTCACCTGCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SWFTCSADEYPEEYLDPSCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...GCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTGAACCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp ATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGATGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: IWYHSCWEVSLDTPLSSGCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...TCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: SPDGGLWPEKQQVRATCRQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...CCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp GGGCTACCTGCAGGTCACTTTCTAGGGGTCAGTGACTTCAGTGCTCACTGCACTGAGCAGGGCCCACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: GLPAGHFLGVSDFSAHCTEQGPP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTC...AGTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAGTGACCTGCAGGTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp TGTGTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCTATCTAGCACAGCCTaGGCACAAGAGCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: CVSYEWPTGLCRPHGEQGLSSTA*AQELPF
Trigger: AAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATAG...GCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp TACATAAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCGACGGTTGGACCAGTTaGGGATGCCCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: YINTIWYHSCWEVSLDTPDGWTS*GCPRSR
Trigger: CCTGGACCTGGGGCATCCCCAACTGGTCCAACCGTC...GGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAGATGGGGAAGGGGTTCTGGATGGAGATGTTCTTGAGCTCTACAAGCATTTGCACTCACCCGGACGGTTaGACCAGTTGGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: QMGKGFWMEMFLSSTSICTHPDG*TSWGCP
Trigger: GGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGT...GCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCAGAACCCCTTCCCCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGCTGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTAAAGCCCAATCAAGGGTCTAGGAGCTaGCTTAGGTCTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: GWGLKEAVSHPEVCLKPNQGSRS*LRSLLP
Trigger: GGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTG...ATTGGGCTTTAAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTATACTCTCCAATTTGTaGGTAGGGGGTGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: SYEWPTGLCRPHGEQGPPILSNL*VGGVTA
Trigger: TGCTGTGACACCCCCTACCCACAAATTGGAGAGTAT...AGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp ACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAGGTCCCAATCCCGACTATTaGGCTGGGAACCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: TRITKLTRTVGPVGDAPGPNPDY*AGNPVY
Trigger: ATAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGG...ACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGAAACCCCAATCCCGACTATTaGGCTGGGAACCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: WYHSCWEVSLDTPLSSGNPNPDY*AGNPVY
Trigger: ATAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGG...GTTTCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGCCCAATCCCGACTATTaGGCTGGGAACCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: GEQGPPWRVMSTGGYRKKPNPDY*AGNPVY
Trigger: ATAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGG...CTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR CCA 90 bp GATCCCAGCTCCCCATCACTGTCAGAGTCGAGGGACACCAGGTTTTCATCTGGACCCAAGACCCCAAGCTaGCATGACTCTGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: DPSSPSLSESRDTRFSSGPKTPS*HDSGLC
Trigger: ACAGAGACCAGAGTCATGCCAGCTTGGGGTCTTGGG...TCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGTGATGGGGAGCTGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR CCA 90 bp GATCCCAGCTCCCCATCACTGTCAGAGTCGAGGGACACCAGGTTTTCATCTGGATTCACTGACGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: DPSSPSLSESRDTRFSSGFTDAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCGTCAGTGAA...TCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGTGATGGGGAGCTGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563413.5
ENST00000563877.5
ENST00000569524.5
CDS-3UTR TCA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATTCTGCAGCTTGGCTTaGATGGAGGGTGCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLFCSLA*MEGARV
Trigger: GACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAA...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
CDS-3UTR TCA 90 bp GTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGTTCTGCAGCTTGGCTTaGATGGAGGGTGCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: VQGFWKPGSCCIIKQPAMFCSLA*MEGARV
Trigger: GACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAA...CATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
CDS-3UTR TCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACCACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TATGTGGCCACTGGCCCTAAACAACTGACCATTTCTACCCTGCCTCACTGCACTGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: YVATGPKQLTISTLPHCTALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...AGTGCAGTGAGGCAGGGTAGAAATGGTCAGTTGTTTAGGGCCAGTGGCCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp CAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QVLVIWNLIQVIPILKQLALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...CAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp TTCCACAGCCACCTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTGTAAGGCCCATGCTGTaGCCAGAAGAATCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: FHSHLPAHTGSLYLCCCLVRPML*PEESGN
Trigger: ATTGCCAGATTCTTCTGGTCACAGCATGGGCCTTAC...AAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGGTGGCTGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TTCCTGTCTGTAAGCCTCAGTCTAGGACAAAGCCCACACAGCTGTATACCCACTCAGGCCATTCTGCCCTaGCCACCTCCCCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: FLSVSLSLGQSPHSCIPTQAILP*PPPQQR
Trigger: TCTCTGTTGGGGAGGTGGTCAGGGCAGAATGGCCTG...AGTGGGTATACAGCTGTGTGGGCTTTGTCCTAGACTGAGGCTTACAGACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCGTTCACCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: PRHLESHPGDTHPEAAAGVHLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGGTGAAC...GCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564019.1
ENST00000566194.5
ENST00000567388.5
ENST00000570143.5
CDS-3UTR GCA 90 bp CAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: QVLVIWNLIQVIPILKQLGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...CAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR GCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACCAGGTAAGGGCTACCTaGAGGTCACTTTCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHQVRAT*RSLSRG
Trigger: ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTG...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp TTCACCTGCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCACAGGTAAGGGCTACCTaGAGGTCACTTTCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: FTCSADEYPEEYLDPSSPQVRAT*RSLSRG
Trigger: ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTG...TGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGTCAGACTTCTCCAAACTCTaGTCCAACAGCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PDGGLWPEKQQVRATCRSDFSKL*SNSRGK
Trigger: TTTTCCTCTGCTGTTGGAGCAGAGTTTGGAGAAGTC...TGACCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp CACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAACAGAGTAACCATCTaGCTCTCTTCCCAAGACCCC +
Preference number: 4 (lower is better)
Translates to: HHMVPLLLGGKPGYTPLLNRVTI*LSSQDP
Trigger: GGGGTCTTGGGAAGAGAGGCAGATGGTTACTCTGTT...GAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp TCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGAGCATTTGCACAAAGTaGTCAGAATGTTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: STYQPTAQMGASGLRSNRSICTK*SECWPL
Trigger: CAGTGGCCAACATTCTGAGCACTTTGTGCAAATGCT...CCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR GCA 90 bp CCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAGAATTAAGGCAACACCCAGGCCATTCTaGCCTGACCACCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PLLRKLSPAEHTALRIKATPRPF*PDHLPN
Trigger: GTTGGGGAGGTGGTCAGGGCAGAATGGCCTGGGTGT...TGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AAGCAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTTGGAGGGTAGCGCGTCACCATGTATaGCCCCCGCTTTTCCACGGC +
Preference number: 4 (lower is better)
Translates to: KQPAMIPVIVRQVQPWRVARHHV*PPLFHG
Trigger: GCCGTGGAAAAGCGGGGGCCATACATGGTGACGCGC...TACCCTCCAAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
CDS-3UTR CCA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTTGGAGGGTAATGGCGCGTCACCATGTATaGCCCCCGCTTTTCCACGGC +
Preference number: 4 (lower is better)
Translates to: QPAMIPVIVRQVQPWRVMARHHV*PPLFHG
Trigger: GCCGTGGAAAAGCGGGGGCCATACATGGTGACGCGC...CATTACCCTCCAAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
CDS-3UTR CCA 90 bp CAGATGGGGAAGGGGTTCTGGATGGAGATGTTCTTGAGCTCTACAAGCATTTGCGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: QMGKGFWMEMFLSSTSICAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...GCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCAGAACCCCTTCCCCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAAAAGTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PAMIPVIVRQVQPEEGQKSAERP*PGPGAS
Trigger: AGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGA...CTTTTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
CDS-3UTR CCA 90 bp CTGGATACACCCCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCATGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LDTPLSSGNCHLQNTQHSCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...TGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGGGGTGTATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TGTGTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CVSYEWPTGLCRPHGEQGEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...GCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563877.5
ENST00000565772.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp TGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CRPHGEQGPPWRVMSTGGEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...CCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGGAGCAGGGCCCACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: PRSRDSGSQDPAVSLSNLEQGPP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTC...CAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCATGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QTRITKLTRTVGPVGDAPCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...TGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAGCCTGGGCACAAGAGCTCCCTTTTTGCCTCCCTGAAGCACTATGACAAATACCCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: QPGHKSSLFASLKHYDKYPDGGL*PEKQQV
Trigger: TACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG...GTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGGAGCTCTTGTGCCCAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp TGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCAGGTCCAGGGATTCTaGAAGCCAGGATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CPRSRDSGSQDPAVSLSNQVQGF*KPGSCC
Trigger: ACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTG...GTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCAGGTCCAGGGATTCTaGAAGCCAGGATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PRSRDSGSQDPAVSLSNLQVQGF*KPGSCC
Trigger: ACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTG...CAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GAGGAAAACTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGTCCCGACTATTGGGCTaGGAACCCTGTCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: EENYRILPISPQPRWGPLSRLLG*EPCLCP
Trigger: TGGGCATAGACAGGGTTCCCAGCCCAATAGTCGGGA...CAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAGTTTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp GATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCTCTCTTACCCTTCCTGCCCAAGACCCCAAGCTaGCATGACTCTGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: DFLRQGSRSWLRSLLPFLPKTPS*HDSGLC
Trigger: ACAGAGACCAGAGTCATGCCAGCTTGGGGTCTTGGG...CAGGAAGGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCATGGTCTCTGCAGATaGGGAAGGGGTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: KGKPESLNSPGRLDQLGMHGLCR*GRGSGW
Trigger: CCATCCAGAACCCCTTCCCCATCTGCAGAGACCATG...CATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GTACATAAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCGATGCAGAGGGCCTTaGTTTTGGGGTCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: VHKHHMVPLLLGGKPGYTRCRGP*FWGPAT
Trigger: GGTGGCAGGACCCCAAAACCAAGGCCCTCTGCATCG...GGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CTGCTGTTTGGGCTGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTACATTGGTGGTATTTTaGTATGTGGCCACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLFGLGAERGCVTPRGLLTLVVF*YVATGP
Trigger: AGGGCCAGTGGCCACATACCAAAATACCACCAATGT...AAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGGAAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGCCCTGGGCACATTGGTaGTATTTTGGTATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GKGKPESLNSPGRLDQLGPWAHW*YFGMWP
Trigger: TGGCCACATACCAAAATACCACCAATGTGCCCAGGG...CCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp ATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGATGGTACCACTCCTGCTaGGAGGTAAGCCTGGATACA +
Preference number: 4 (lower is better)
Translates to: IWYHSCWEVSLDTPLSSGWYHSC*EVSLDT
Trigger: TGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCA...TCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACATTTCACTGACGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: HLESHPGDTHPEAAAGSHFTDAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCGTCAGTGAA...ATGTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563413.5
ENST00000563877.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR CCA 90 bp GCTCACATCCTGGTTCACCTGCTGTCAGAGTCGAGGGACACCAGGTTTTCATCTTTCACTGACGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: AHILVHLLSESRDTRFSSFTDAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCGTCAGTGAA...AGATGAAAACCTGGTGTCCCTCGACTCTGACAGCAGGTGAACCAGGATGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569761.1
CDS-3UTR CCA 90 bp GGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCCTTGTCACCCGGACGGTTaGACCAGTTGGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: GFWKPGSCCIIKQPAMIPCHPDG*TSWGCP
Trigger: GGGGCATCCCCAACTGGTCCAACCGTCCGGGTGACA...AGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563671.5
CDS-3UTR CCA 90 bp GGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCATTGCCGGCTCACATCCTaGTTCACCTCTGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: GSPLQMNTRRSIWIPAPHCRLTS*FTSADE
Trigger: TTCATCTGCAGAGGTGAACCAGGATGTGAGCCGGCA...ATGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000564019.1
ENST00000566194.5
ENST00000567388.5
ENST00000570143.5
CDS-3UTR TCA 90 bp GAGGAAAACTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGCTTTCTAGGGGTCAGTaGCTTCAGTGCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: EENYRILPISPQPRWGPLLSRGQ*LQCSLH
Trigger: GTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAG...CAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAGTTTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp GTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCATTGCCCTTATTAAAGTaGCTTCTCCAAACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VSYEWPTGLCRPHGEQGPLPLLK*LLQTLL
Trigger: GAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAA...TGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp TGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGCTCCCTGAAGCACTATaGCAAATACCAATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: CRPHGEQGPPWRVMSTGGLPEAL*QIPIKL
Trigger: CAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAG...CCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp GAGGAAAACTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGTCTACACTGGTGGACTaGTTTCCTCAGGCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: EENYRILPISPQPRWGPLSTLVD*FPQARV
Trigger: GACCCTTGCCTGAGGAAATCAGTCCACCAGTGTAGA...CAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAGTTTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp TATCTCTCTGCTGTGATGCTCCTAGCTAGTAGAGTAAGTCAGCCCCCAGATACTCAGGCCATTCTGCCCTaGCCACCTCCCCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: YLSAVMLLASRVSQPPDTQAILP*PPPQQR
Trigger: TCTCTGTTGGGGAGGTGGTCAGGGCAGAATGGCCTG...AGTATCTGGGGGCTGACTTACTCTACTAGCTAGGAGCATCACAGCAGAGAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TCTTTAGCTCAAAGACTGGGTGAAGAAACTCACCCAGACCAAGGAAATACAAATCCCGTGGCGAAAGAGTaGCCGGCCGAGGGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: SLAQRLGEETHPDQGNTNPVAKE*PAEGEA
Trigger: CGCCTCTCCCTCGGCCGGTCACTCTTTCGCCACGGG...ATTTGTATTTCCTTGGTCTGGGTGAGTTTCTTCACCCAGTCTTTGAGCTAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGGCCCTGGAATGTACATaGAGGGCCTGTCAGAGTCGA +
Preference number: 4 (lower is better)
Translates to: QVLVIWNLIQVIPILKQLALECT*RACQSR
Trigger: TCGACTCTGACAGGCCCTTCATGTACATTCCAGGGC...CAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000567388.5
ENST00000570143.5
CDS-3UTR TCA 90 bp CTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTGTTCACCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: LVIWNLIQVIPILKQLPAVHLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGGTGAAC...AGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564019.1
ENST00000566194.5
ENST00000567388.5
ENST00000570143.5
CDS-3UTR GCA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTAGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000569524.5
CDS-3UTR GCA 90 bp GAGGAAAACTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGCAGGTAAGGGCTACCTaGAGGTCACTTTCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: EENYRILPISPQPRWGPLQVRAT*RSLSRG
Trigger: ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTG...CAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAGTTTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp TGTGTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCTGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: CVSYEWPTGLCRPHGEQGWKPGS*CIIKQP
Trigger: AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCA...GCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR GCA 90 bp TCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTTCTTTACACTGTGGTGTTGTCCCTCTCATaGCTCTGGTGGTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: SQHTLGPSTCVAVFLYTVVLSLS*LWWSQD
Trigger: GTCCTGTGACCACCAGAGGCATGAGAGGGACAACAC...CACAGTGTAAAGAAAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp GATCCCAGCTCCCCATCACTGTCAGAGTCGAGGGACACCAGGTTTTCATCTGGAAACAGAGTAACCATCTaGCTCTCTTCCCAAGACCCC +
Preference number: 4 (lower is better)
Translates to: DPSSPSLSESRDTRFSSGNRVTI*LSSQDP
Trigger: GGGGTCTTGGGAAGAGAGGCAGATGGTTACTCTGTT...TCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGTGATGGGGAGCTGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR GCA 90 bp AAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCAGAATGTTGGCCACTaGATAGAGCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KHHMVPLLLGGKPGYTPLQNVGH*IELQSP
Trigger: GGGACTCTGCAGCTCTATGCAGTGGCCAACATTCTG...GAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CTGCTGTTTGGGCTGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTAGCATTTGCACAAAGTaGTCAGAATGTTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: LLFGLGAERGCVTPRGLLSICTK*SECWPL
Trigger: CAGTGGCCAACATTCTGAGCACTTTGTGCAAATGCT...AAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTTGGAGGGTAATGGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCA +
Preference number: 4 (lower is better)
Translates to: QPAMIPVIVRQVQPWRVMAAWLE*RVRASP
Trigger: TGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGC...CATTACCCTCCAAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
CDS-3UTR CCA 90 bp GACTCACTTTATGCTGTCTTGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: DSLYAVLKVKPANHLRARSAERP*PGPGAS
Trigger: AGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGA...CCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
CDS-3UTR CCA 90 bp GCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGAGTCCCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AGPTLEGNVYWRVQEEESHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...GGACTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp ATGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAATGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: MPQVQGFWKPGSCCIIKQCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...TTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GATGAGGTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGGAGCAGGGCCCACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: DEVQVLVIWNLIQVIPILEQGPP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTC...CAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGACCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACATTGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: HLESHPGDTHPEAAAGSHCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...ATGTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp TCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCTATCTAGCACAGCCTaGGCACAAGAGCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: SWFTSADEYPEEYLDPSSLSSTA*AQELPF
Trigger: AAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATAG...GGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570143.5
CDS-3UTR CCA 90 bp AGACTTGCTCATCTTCTAGTCACCCCTTGTGGTAGAGCGAAAAGAGTGTGTTGTACTCACCCGGACGGTTaGACCAGTTGGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: RLAHLLVTPCGRAKRVCCTHPDG*TSWGCP
Trigger: GGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGT...ACAACACACTCTTTTCGCTCTACCACAAGGGGTGACTAGAAGATGAGCAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AAAACTACAGAATTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGGCCCTCTACACTGGTaGACTGATTTCCTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: KTTEFYLSAHSPDGGLWPGPLHW*TDFLRQ
Trigger: TTGCCTGAGGAAATCAGTCCACCAGTGTAGAGGGCC...AGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAATTCTGTAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp TGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACGGCCCTCTACACTGGTaGACTGATTTCCTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: CPRSRDSGSQDPAVSLSNGPLHW*TDFLRQ
Trigger: TTGCCTGAGGAAATCAGTCCACCAGTGTAGAGGGCC...GTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGGGAGGCCCTCTACACTaGTGGACTGATTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QVLVIWNLIQVIPILKQLGGPLH*WTDFLR
Trigger: CCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCC...CAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR CCA 90 bp TATCTAGCACAGCCTGGGCACAAGAGCTCCCTTTTTGCCTCCCTGAAGCACTATTCCCTCTCATGCCTCTaGTGGTCACAGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: YLAQPGHKSSLFASLKHYSLSCL*WSQDTE
Trigger: CTCAGTGTCCTGTGACCACCAGAGGCATGAGAGGGA...ATAGTGCTTCAGGGAGGCAAAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp CCTCAGTCTAGGACAAAGCCCACACAGCTGTATACCCACTCTCACGAGTCCATTCCCAAGACCCCAAGCTaGCATGACTCTGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PQSRTKPTQLYTHSHESIPKTPS*HDSGLC
Trigger: ACAGAGACCAGAGTCATGCCAGCTTGGGGTCTTGGG...AATGGACTCGTGAGAGTGGGTATACAGCTGTGTGGGCTTTGTCCTAGACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGCTGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTAAAGCCCAATAAGGCAGTTTGGCCCTaGGCACATTGGTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: GWGLKEAVSHPEVCLKPNKAVWP*AHWWYF
Trigger: AAAATACCACCAATGTGCCCAGGGCCAAACTGCCTT...ATTGGGCTTTAAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCATAGAAGAGAACGGCCCTaGAATGTACATGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GSPLQMNTRRSIWIPAPHRRERP*NVHEGP
Trigger: AGGCCCTTCATGTACATTCCAGGGCCGTTCTCTTCT...ATGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567388.5
ENST00000570143.5
CDS-3UTR CCA 90 bp AGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCTGCCGGCTCACATCCTaGTTCACCTCTGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: SPRHLESHPGDTHPEAAACRLTS*FTSADE
Trigger: TTCATCTGCAGAGGTGAACCAGGATGTGAGCCGGCA...GGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564019.1
ENST00000566194.5
ENST00000567388.5
ENST00000570143.5
CDS-3UTR TCA 90 bp ATGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: MPQVQGFWKPGSCCIIKQHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...TTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR TCA 90 bp ACAGGTGCAACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGAGTCCCACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: TGATLEGNVYWRVQEEESHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...GGACTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTTGCACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563413.5
ENST00000566132.5
CDS-3UTR TCA 90 bp CTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGTCACTTTCTAGGGGTCCCTTTTTGCCTCCCTaGAGCACTATGACAAATACC +
Preference number: 4 (lower is better)
Translates to: LWPEKQQVRATCRSLSRGPFLPP*STMTNT
Trigger: GGTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGG...ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp ATAGTTAGACAGGTGCAACCTGAAGAGGGACAAAAGGACTCACTTTATGCTGTCGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: IVRQVQPEEGQKDSLYAVALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...GACAGCATAAAGTGAGTCCTTTTGTCCCTCTTCAGGTTGCACCTGTCTAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTTGGAGGGTAATGGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: QPAMIPVIVRQVQPWRVMGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...CATTACCCTCCAAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
CDS-3UTR GCA 90 bp GCTCCCCATCACTATGAGTCTTCTAACCAAGCCATCCTGGGAAGGGATATTGTTGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGG +
Preference number: 4 (lower is better)
Translates to: APHHYESSNQAILGRDIVGLNGG*ARHHVW
Trigger: CCATACATGGTGACGCGCGCACCCTCCATTCAAGCC...AACAATATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCATAGTGATGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570143.5
CDS-3UTR GCA 90 bp GATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCTCTCTTACCCTTCCTGAACAGAGTAACCATCTaGCTCTCTTCCCAAGACCCC +
Preference number: 4 (lower is better)
Translates to: DFLRQGSRSWLRSLLPFLNRVTI*LSSQDP
Trigger: GGGGTCTTGGGAAGAGAGGCAGATGGTTACTCTGTT...CAGGAAGGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp GTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCAGAATGTTGGCCACTaGATAGAGCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: VQVLVIWNLIQVIPILKQQNVGH*IELQSP
Trigger: GGGACTCTGCAGCTCTATGCAGTGGCCAACATTCTG...CTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR GCA 90 bp AGACTTGCTCATCTTCTAGTCACCCCTTGTGGTAGAGCGAAAAGAGTGTGTTGTACACCCAGGCCATTCTaGCCTGACCACCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: RLAHLLVTPCGRAKRVCCTPRPF*PDHLPN
Trigger: GTTGGGGAGGTGGTCAGGGCAGAATGGCCTGGGTGT...ACAACACACTCTTTTCGCTCTACCACAAGGGGTGACTAGAAGATGAGCAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp GACTCACTTTATGCTGTCTTGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGACACCCAGGCCATTCTaGCCTGACCACCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: DSLYAVLKVKPANHLRARTPRPF*PDHLPN
Trigger: GTTGGGGAGGTGGTCAGGGCAGAATGGCCTGGGTGT...CCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR GCA 90 bp TTCTACCTATCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGTTATTACAACAACGATaGAGAGGGCCTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: FYLSAHSPDGGLWPEKQQLLQQR*RGPWFW
Trigger: CCAAAACCAAGGCCCTCTGCATCGTTGTTGTAATAA...CTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGATAGGTAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR GCA 90 bp ACAGTTGCAGCTGAATATGCCAGAGCTGATTATTACAACAACGATGCAGAGGGCTCTACCCTGCCTCACTaGACTGTCCCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TVAAEYARADYYNNDAEGSTLPH*TVPPGP
Trigger: GGGACCTGGTGGGACAGTGCAGTGAGGCAGGGTAGA...GCCCTCTGCATCGTTGTTGTAATAATCAGCTCTGGCATATTCAGCTGCAACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CCACCTCCCCAACAGAGATGTAGGTCTATACTTACCTTCCACAGCCACCTCCCACAGGAAACTGTCACCTaGAGAACACACAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: PPPQQRCRSILTFHSHLPQETVT*RTHSTQ
Trigger: CTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTG...TGGGAGGTGGCTGTGGAAGGTAAGTATAGACCTACATCTCTGTTGGGGAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp ATGGGGAAGGGGTTCTGGATGGAGATGTTCTTGAGCTCTACAAGCATTTGCACAGGTGCTTCTGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: MGKGFWMEMFLSSTSICTGASAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCAGAAGCACC...TGTGCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCAGAACCCCTTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000563119.5
CDS-3UTR CCA 90 bp GTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VLVIWNLIQVIPILKQLPHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...CGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000564019.1
ENST00000566194.5
ENST00000567388.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR CCA 90 bp ACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAGGTCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: TRITKLTRTVGPVGDAPGQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...ACCTGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: HMVPLLLGGKPGYTPLLRQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...CCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: PRHLESHPGDTHPEAAAGQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...GCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566132.5
ENST00000566194.5
ENST00000567388.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR CCA 90 bp CATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: HGEQGPPWRVMSTGGYRKQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...CTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563877.5
ENST00000566194.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp TTCACCTGCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCAGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FTCSADEYPEEYLDPSSPEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...TGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TCACATCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCATGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SHPGSPLQMNTRRSIWIPCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...TGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566194.5
ENST00000570143.5
CDS-3UTR CCA 90 bp TCTCATGCCTCTGGTGGTCACAGGACACTGAGTAAAGCAAGAGACTGGATACTTCCAGATGGGGGCCTCTaGCCTGAGAAGCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: SHASGGHRTLSKARDWILPDGGL*PEKQQV
Trigger: TACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGG...AAGTATCCAGTCTCTTGCTTTACTCAGTGTCCTGTGACCACCAGAGGCATGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp CCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTCTATCTAGCACAGCCTaGGCACAAGAGCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: PQVQGFWKPGSCCIIKQPLSSTA*AQELPF
Trigger: AAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATAG...AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTACAGGTCCAGGGATTCTaGAAGCCAGGATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLQVQGF*KPGSCC
Trigger: ACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTG...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TTAAGGCAGTTTGGCCCTGGGCACATTGGTGGTATTTTGGTATGTGGCCACTGGGGCCCTCTACACTGGTaGACTGATTTCCTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LRQFGPGHIGGILVCGHWGPLHW*TDFLRQ
Trigger: TTGCCTGAGGAAATCAGTCCACCAGTGTAGAGGGCC...CCAGTGGCCACATACCAAAATACCACCAATGTGCCCAGGGCCAAACTGCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CTGGATACTTTCCCATGTAGAACCTATACCCCAATCCCGACTATTGGGCTGGGATTCTGCTGTTTGGGCTaGGGGCTGAAAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LDTFPCRTYTPIPTIGLGFCCLG*GLKEAV
Trigger: CACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAGAA...TCCCAGCCCAATAGTCGGGATTGGGGTATAGGTTCTACATGGGAAAGTATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AACCATCTGCCTCTCTTCCCAAGACCCCAAGCTGGCATGACTCTGGTCTCTGTCATACTCTCCAATTTGTaGGTAGGGGGTGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: NHLPLFPRPQAGMTLVSVILSNL*VGGVTA
Trigger: TGCTGTGACACCCCCTACCCACAAATTGGAGAGTAT...GACAGAGACCAGAGTCATGCCAGCTTGGGGTCTTGGGAAGAGAGGCAGATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AACCATCTGCCTCTCTTCCCAAGACCCCAAGCTGGCATGACTCTGGTCTCTGTCAAGGCAGTTTGGCCCTaGGCACATTGGTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: NHLPLFPRPQAGMTLVSVKAVWP*AHWWYF
Trigger: AAAATACCACCAATGTGCCCAGGGCCAAACTGCCTT...GACAGAGACCAGAGTCATGCCAGCTTGGGGTCTTGGGAAGAGAGGCAGATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GAGGTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGTGGTACCACTCCTGCTaGGAGGTAAGCCTGGATACA +
Preference number: 4 (lower is better)
Translates to: EVQVLVIWNLIQVIPILKWYHSC*EVSLDT
Trigger: TGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCA...CTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCTACATAAACACCATATaGTACCACTCCTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HHMVPLLLGGKPGYTPLLYINTI*YHSCWE
Trigger: CTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTA...GAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TCCTGGTTCACCTGCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCAGACAGGTGCAACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: SWFTCSADEYPEEYLDPSRQVQP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTTGCACCTGTCT...GCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTGAACCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563413.5
ENST00000566132.5
CDS-3UTR CCA 90 bp GTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTCACAGACAGGTGCAACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: VIWNLIQVIPILKQLPAHRQVQP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTTGCACCTGTCT...GTGAGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563413.5
ENST00000566132.5
CDS-3UTR TCA 90 bp GATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCTCTCTTACCCTTCCTGCCCTTTTTGCCTCCCTaGAGCACTATGACAAATACC +
Preference number: 4 (lower is better)
Translates to: DFLRQGSRSWLRSLLPFLPFLPP*STMTNT
Trigger: GGTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGG...CAGGAAGGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp GTACATAAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCTCTACACTGGTGGACTaGTTTCCTCAGGCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VHKHHMVPLLLGGKPGYTSTLVD*FPQARV
Trigger: GACCCTTGCCTGAGGAAATCAGTCCACCAGTGTAGA...GGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp GCCACCTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTTCTTTACGGATGGAGATGTTCTTaGGCTCTACAAGCATTTGCA +
Preference number: 4 (lower is better)
Translates to: ATSQHTLGPSTCVAVFLYGWRCS*ALQAFA
Trigger: TGCAAATGCTTGTAGAGCTCAAGAACATCTCCATCC...GTAAAGAAAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp GGATGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCACACTGTGCTACATTTaGTCCCTTTCCACATGTGCA +
Preference number: 4 (lower is better)
Translates to: GCPRSRDSGSQDPAVSLSTLCYI*SLSTCA
Trigger: TGCACATGTGGAAAGGGATCAAATGTAGCACAGTGT...GCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TCCCAGCTCCCCATCACTATGAGTCTTCTAACCAAGCCATCCTGGGAAGGGATAGTTCACCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: SQLPITMSLLTKPSWEGIVHLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGGTGAAC...TATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCATAGTGATGGGGAGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564019.1
ENST00000570143.5
CDS-3UTR GCA 90 bp GCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATATGGTACCACTCCTGGCGAGGCCCCCAGCATaGCTTTTCTCCGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: ASQEFYRVVHKHHMVPLLARPPA*LFSAER
Trigger: CCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCTCGC...CAGGAGTGGTACCATATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
CDS-3UTR GCA 90 bp GCCACCTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTTCTTTACGACTTCTCCAAACTCTaGTCCAACAGCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: ATSQHTLGPSTCVAVFLYDFSKL*SNSRGK
Trigger: TTTTCCTCTGCTGTTGGAGCAGAGTTTGGAGAAGTC...GTAAAGAAAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR GCA 90 bp CCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAGAATTAAGGCACAGAATGTTGGCCACTaGATAGAGCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PLLRKLSPAEHTALRIKAQNVGH*IELQSP
Trigger: GGGACTCTGCAGCTCTATGCAGTGGCCAACATTCTG...TGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp TGCACTTCACCTCTGCAGACACAAGAAAGGCCTGGACATGGTCTCTGCAGATGGATCCCTTTCCACATGTaGACTTCACCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: CTSPLQTQERPGHGLCRWIPFHM*TSPLQT
Trigger: TGTCTGCAGAGGTGAAGTGCACATGTGGAAAGGGAT...CCATCTGCAGAGACCATGTCCAGGCCTTTCTTGTGTCTGCAGAGGTGAAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CTGCCTCACTGCACTGTCCCACCAGGTCCCTCCAGCTTTTTCTACAAGGTAACAATCCCTTTCCACATGTaGACTTCACCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: LPHCTVPPGPSSFFYKVTIPFHM*TSPLQT
Trigger: TGTCTGCAGAGGTGAAGTGCACATGTGGAAAGGGAT...TGTTACCTTGTAGAAAAAGCTGGAGGGACCTGGTGGGACAGTGCAGTGAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp GGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGAAGAAGTTATTACAACAACGATaGAGAGGGCCTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GEQGPPWRVMSTGGYRKKLLQQR*RGPWFW
Trigger: CCAAAACCAAGGCCCTCTGCATCGTTGTTGTAATAA...CTTCTTCCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR CCA 90 bp CCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PANHLRARKNRANGISRTSAERP*PGPGAS
Trigger: AGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGA...AGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
CDS-3UTR CCA 90 bp CATCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HPGSPLQMNTRRSIWIPAHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...AGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000564019.1
ENST00000566194.5
ENST00000567388.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAAAAGTGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PAMIPVIVRQVQPEEGQKCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...CTTTTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TCTCATGCCTCTGGTGGTCACAGGACACTGAGTAAAGCAAGAGACTGGATACTTTGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SHASGGHRTLSKARDWILCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...AAGTATCCAGTCTCTTGCTTTACTCAGTGTCCTGTGACCACCAGAGGCATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCCTTGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GFWKPGSCCIIKQPAMIPCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...AGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: VLVIWNLIQVIPILKQLPQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...CGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566132.5
ENST00000566194.5
ENST00000567388.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR CCA 90 bp CCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCATCACTATGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLQMNTRRSIWIPAPHHYEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...ATAGTGATGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567388.5
ENST00000570143.5
CDS-3UTR CCA 90 bp ATTTGCACAAAGTGCTCAGAATGTTGGCCACTGCATAGAGCTGCAGAGTCCCATCAGGTCCAGGGATTCTaGAAGCCAGGATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ICTKCSECWPLHRAAESHQVQGF*KPGSCC
Trigger: ACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTG...ATGGGACTCTGCAGCTCTATGCAGTGGCCAACATTCTGAGCACTTTGTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCTTCTGCTGTTTGGGCTaGGGGCTGAAAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QGFWKPGSCCIIKQPAMIFCCLG*GLKEAV
Trigger: CACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAGAA...GATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CTGGATACACCCCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAATACTCTCCAATTTGTaGGTAGGGGGTGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: LDTPLSSGNCHLQNTQHSILSNL*VGGVTA
Trigger: TGCTGTGACACCCCCTACCCACAAATTGGAGAGTAT...TGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGGGGTGTATCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CCACCTCCCCAACAGAGATGTAGGTCTATACTTACCTTCCACAGCCACCTCCCAAAGTGCTCAGAATGTTaGCCACTGCATAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPPQQRCRSILTFHSHLPKCSEC*PLHRAA
Trigger: TGCAGCTCTATGCAGTGGCCAACATTCTGAGCACTT...TGGGAGGTGGCTGTGGAAGGTAAGTATAGACCTACATCTCTGTTGGGGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp ACTAGGGAAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTATGGGGAAGGGGTTCTaGATGGAGATGTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TREGQTRITKLTRTVGPVMGKGF*MEMFLS
Trigger: GCTCAAGAACATCTCCATCCAGAACCCCTTCCCCAT...AACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTTCCCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GACTCACTTTATGCTGTCTTGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGCCTCCCAGCACACACTaGGTCCCTCTACCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: DSLYAVLKVKPANHLRARPPSTH*VPLPVL
Trigger: CAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGG...CCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp AGCCACCTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTTCTTTAAAGGCAGTTTGGCCCTaGGCACATTGGTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: SHLPAHTGSLYLCCCLSLKAVWP*AHWWYF
Trigger: AAAATACCACCAATGTGCCCAGGGCCAAACTGCCTT...TAAAGAAAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GTCACCCCTTGTGGTAGAGCGAAAAGAGTGTGTTGTCCCTCTCATGCCTCTGGTAGACAGGTGCAACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: VTPCGRAKRVCCPSHASGRQVQP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTTGCACCTGTCT...ACCAGAGGCATGAGAGGGACAACACACTCTTTTCGCTCTACCACAAGGGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563119.5
CDS-3UTR TCA 90 bp TTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCCTGTCCACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: FWKPGSCCIIKQPAMIPVHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...GACAGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR TCA 90 bp ATTTGCACAAAGTGCTCAGAATGTTGGCCACTGCATAGAGCTGCAGAGTCCCATCACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: ICTKCSECWPLHRAAESHHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...ATGGGACTCTGCAGCTCTATGCAGTGGCCAACATTCTGAGCACTTTGTGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp GCCTCCCTGAAGCACTATGACAAATACCAATCAAGCTGTCTGCAAGTGTTTTCCGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: ASLKHYDKYQSSCLQVFSAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...GGAAAACACTTGCAGACAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp CCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTCTCCCTGAAGCACTATaGCAAATACCAATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PQVQGFWKPGSCCIIKQPLPEAL*QIPIKL
Trigger: CAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAG...AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR TCA 90 bp GCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATATGGTACCACTCCTGGTTTGGGCTGGGGGCTaGAAGAGGCTGTGTCACACC +
Preference number: 4 (lower is better)
Translates to: ASQEFYRVVHKHHMVPLLVWAGG*KRLCHT
Trigger: GGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAAC...CAGGAGTGGTACCATATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CTTTACACTGTGCTACATTTGATCCCTTTCCACATGTGCACTTCACCTCTGCAGGACCCCAAGCTGGCATaGCTCTGGTCTCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: LYTVLHLIPFHMCTSPLQDPKLA*LWSLSY
Trigger: ATAGGACAGAGACCAGAGTCATGCCAGCTTGGGGTC...CTGCAGAGGTGAAGTGCACATGTGGAAAGGGATCAAATGTAGCACAGTGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TTATGCCTATTTCTGCTGTTTGGGCTGGGGGCTGAAAGAGGCTGTGTCACACCCACACTGTGCTACATTTaGTCCCTTTCCACATGTGCA +
Preference number: 4 (lower is better)
Translates to: LCLFLLFGLGAERGCVTPTLCYI*SLSTCA
Trigger: TGCACATGTGGAAAGGGATCAAATGTAGCACAGTGT...GGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAGAAATAGGCATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTTGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: PQVQGFWKPGSCCIIKQPWKPGS*CIIKQP
Trigger: AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCA...AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR GCA 90 bp AAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCTGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: KHHMVPLLLGGKPGYTPLWKPGS*CIIKQP
Trigger: AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCA...GAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR GCA 90 bp GTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGTGTGCACTTCACCTCTaGAGACACAAGAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VQGFWKPGSCCIIKQPAMCALHL*RHKKGL
Trigger: CAGGCCTTTCTTGTGTCTGCAGAGGTGAAGTGCACA...CATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp ATAGAGCTGCAGAGTCCCATTCCAGAACAGAGTAACCATCTGCCTCTCTTCCCACAGGAAACTGTCACCTaGAGAACACACAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: IELQSPIPEQSNHLPLFPQETVT*RTHSTQ
Trigger: CTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTG...TGGGAAGAGAGGCAGATGGTTACTCTGTTCTGGAATGGGACTCTGCAGCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp TTCCTGTCTGTAAGCCTCAGTCTAGGACAAAGCCCACACAGCTGTATACCCACTCAGGAAACTGTCACCTaGAGAACACACAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: FLSVSLSLGQSPHSCIPTQETVT*RTHSTQ
Trigger: CTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTG...AGTGGGTATACAGCTGTGTGGGCTTTGTCCTAGACTGAGGCTTACAGACAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTAATATGGTACCACTCCTaGTGGGAGGTAAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLIWYHS*WEVSLD
Trigger: ATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATAT...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TTGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAGGTGCTTCTGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: LKVKPANHLRARKNRANGGASAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCAGAAGCACC...TCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000563069.5
CDS-3UTR CCA 90 bp TATCTAGCACAGCCTGGGCACAAGAGCTCCCTTTTTGCCTCCCTGAAGCACTATCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: YLAQPGHKSSLFASLKHYHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...ATAGTGCTTCAGGGAGGCAAAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QVLVIWNLIQVIPILKQLHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...CAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566194.5
ENST00000567388.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR CCA 90 bp GCCTCCCTGAAGCACTATGACAAATACCAATCAAGCTGTCTGCAAGTGTTTTCCTGCCGGCTCACATCCTaGTTCACCTGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: ASLKHYDKYQSSCLQVFSCRLTS*FTCSAD
Trigger: ATCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCA...GGAAAACACTTGCAGACAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CACCCAGAGGTCTGCTTAAAGCCCAATCCTGAGTATCCAGTAAGGCCCATGCTGCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: HPEVCLKPNPEYPVRPMLQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...CAGCATGGGCCTTACTGGATACTCAGGATTGGGCTTTAAGCAGACCTCTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TATCTAGCACAGCCTGGGCACAAGAGCTCCCTTTTTGCCTCCCTGAAGCACTATGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: YLAQPGHKSSLFASLKHYEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...ATAGTGCTTCAGGGAGGCAAAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp GAGGTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: EVQVLVIWNLIQVIPILKEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...CTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566132.5
ENST00000566194.5
ENST00000567388.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp ATGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAAGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: MPQVQGFWKPGSCCIIKQEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...TTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TCACATCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SHPGSPLQMNTRRSIWIPEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...TGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566194.5
ENST00000567388.5
ENST00000570143.5
CDS-3UTR CCA 90 bp GCCTCCCTGAAGCACTATGACAAATACCAATCAAGCTGTCTGCAAGTGTTTTCCGAGCAGGGCCCACCTTaGAGGGTAATGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: ASLKHYDKYQSSCLQVFSEQGPP*RVMSTG
Trigger: TCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTC...GGAAAACACTTGCAGACAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp GGAGATGTTCTTGAGCTCTACAAGCATTTGCACAAAGTGCTCAGAATGTTGGCCGGAGGCCCTCTACACTaGTGGACTGATTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GDVLELYKHLHKVLRMLAGGPLH*WTDFLR
Trigger: CCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCC...GGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGAGATGTTCTTGAGCTCTACAAGCATTTGCACAAAGTGCTCAGAATGTTGGCCTCCCGACTATTGGGCTaGGAACCCTGTCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: GDVLELYKHLHKVLRMLASRLLG*EPCLCP
Trigger: TGGGCATAGACAGGGTTCCCAGCCCAATAGTCGGGA...GGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TGTCTGCAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATCCTCCCAGCACACACTaGGTCCCTCTACCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: CLQVFSLATFVTHHKNQNPPSTH*VPLPVL
Trigger: CAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGG...ATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp CCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGTGGTATTTTGGTATGTaGCCACTGGCCCTAAACAAC +
Preference number: 4 (lower is better)
Translates to: PRSRDSGSQDPAVSLSNLWYFGM*PLALNN
Trigger: GTTGTTTAGGGCCAGTGGCCACATACCAAAATACCA...CAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACTACATAAACACCATATaGTACCACTCCTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CPRSRDSGSQDPAVSLSNYINTI*YHSCWE
Trigger: CTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTA...GTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CTGCCTCACTGCACTGTCCCACCAGGTCCCTCCAGCTTTTTCTACAAGGTAACATACATAAACACCATATaGTACCACTCCTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPHCTVPPGPSSFFYKVTYINTI*YHSCWE
Trigger: CTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTA...TGTTACCTTGTAGAAAAAGCTGGAGGGACCTGGTGGGACAGTGCAGTGAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TGTCTGCAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATCACACTCACGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: CLQVFSLATFVTHHKNQNHTHAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCGTGAGTGTG...ATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565772.5
3UTR CAA 72 bp CTTTCCCATGTAGAACCTATACCCCAATCCCGACTATaGGGCTGGGAACCCTGTCTATGCCCATTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSHVEPIPQSRL*GWEPCLCPFKA
Trigger: AGCTTTGAATGGGCATAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGGGTATAGGTTCTACATGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSLQTILELGRIEQTEFLALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...GAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp AGCCCCCAGATACTGTATATTCCTCTCAACCTTCCATGGTTTGAGAAAAACACAGCACTGTGTGAGCTATaGGTGGCCAACAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPQILYIPLNLPWFEKNTALCEL*VANRAL
Trigger: CAGAGCCCTGTTGGCCACTCATAGCTCACACAGTGC...TGTGTTTTTCTCAAACCATGGAAGGTTGAGAGGAATATACAGTATCTGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp TGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACTTGCCCTTATTAAAGTaGCTTCTCCAAACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CPRSRDSGSQDPAVSLSNLPLLK*LLQTLL
Trigger: GAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAA...GTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCTCCCTGAAGCACTATaGCAAATACCAATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: QVLVIWNLIQVIPILKQLLPEAL*QIPIKL
Trigger: CAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAG...CAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp GCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAAAAGGACGTAAGGCCCATGCTGTaGCCAGAAGAATCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: AMIPVIVRQVQPEEGQKDVRPML*PEESGN
Trigger: ATTGCCAGATTCTTCTGGTCACAGCATGGGCCTTAC...GTCCTTTTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp GTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGCTTAAAGCCCAATCCTaGGTATCCAGTAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VQGFWKPGSCCIIKQPAMLKAQS*VSSKAH
Trigger: ATGGGCCTTACTGGATACTCAGGATTGGGCTTTAAG...CATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp ATTTTCTGTCTTGCCCTTATTAAAGTGACTTCTCCAAACTCTGCTCCAACAGCAGTTTGGGCTGGGGGCTaGAAGAGGCTGTGTCACACC +
Preference number: 4 (lower is better)
Translates to: IFCLALIKVTSPNSAPTAVWAGG*KRLCHT
Trigger: GGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAAC...TGCTGTTGGAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAAGACAGAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp TCTGCTGTGATGCTCCTAGCTAGTAGAGTAAGTCAGCCCCCAGATACTGTATATCTGGCCCTAAACAACTaGCCATTTCTACCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SAVMLLASRVSQPPDTVYLALNN*PFLPCL
Trigger: GAGGCAGGGTAGAAATGGTCAGTTGTTTAGGGCCAG...ATATACAGTATCTGGGGGCTGACTTACTCTACTAGCTAGGAGCATCACAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGTTTCCGAACGGATTTTaGGGGGCGAGAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVFSLATFVTHHKNQNFLFPNGF*GARAGC
Trigger: GCAGCCTGCTCTCGCCCCTCAAAATCCGTTCGGAAA...CAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565772.5
CDS-3UTR TCA 90 bp GATGAGGTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGCTTGTTAAACTTCACTaGCCTTTTCTCCGCAGAACG +
Preference number: 4 (lower is better)
Translates to: DEVQVLVIWNLIQVIPILLVKLH*PFLRRT
Trigger: CGTTCTGCGGAGAAAAGGTCAGTGAAGTTTAACAAG...CAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGACCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566194.5
CDS-3UTR GCA 90 bp CTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTGGTCTCAAACAGTTTCTTTGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: LGRIEQTEFLELVSNSFFALLPI*PEGGPA
Trigger: TGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGC...AAAGAAACTGTTTGAGACCAGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp GACTCACTTTATGCTGTCTTGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGCAGGTAAGGGCTACCTaGAGGTCACTTTCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: DSLYAVLKVKPANHLRARQVRAT*RSLSRG
Trigger: ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTG...CCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR GCA 90 bp GAGGTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGTGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: EVQVLVIWNLIQVIPILKWKPGS*CIIKQP
Trigger: AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCA...CTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTTGGAGGGTAATGTCACACCCAGAGGTCTaGTTAAAGCCCAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: QPAMIPVIVRQVQPWRVMSHPEV*LKPNPE
Trigger: CTCAGGATTGGGCTTTAAGCAGACCTCTGGGTGTGA...CATTACCCTCCAAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563119.5
CDS-3UTR GCA 90 bp AGCTTTTTCTACAAGGTAACACCCTCCTACATGGGGTCAGCCAGCTCAGAAACCTGGGAACCCTGTCTATaGCCATTCAAAGCTCACCAT +
Preference number: 4 (lower is better)
Translates to: SFFYKVTPSYMGSASSETWEPCL*PFKAHH
Trigger: ATGGTGAGCTTTGAATGGGCATAGACAGGGTTCCCA...GGTTTCTGAGCTGGCTGACCCCATGTAGGAGGGTGTTACCTTGTAGAAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp TTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCCTGTCTGTGCACTTCACCTCTaGAGACACAAGAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FWKPGSCCIIKQPAMIPVCALHL*RHKKGL
Trigger: CAGGCCTTTCTTGTGTCTGCAGAGGTGAAGTGCACA...GACAGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAAGGTGCTTCTGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: SLQTILELGRIEQTEFLEGASAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCAGAAGCACC...TTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000563069.5
CDS-3UTR CCA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTACACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAGCTCCCCATCACTATGAGTCTTCTAACCAAGCCATCCTGGGAAGGGATATTGCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QLPITMSLLTKPSWEGILHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...CAATATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCATAGTGATGGGGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564019.1
ENST00000570143.5
CDS-3UTR CCA 90 bp ACCAAGCCATCCTGGGAAGGGATATTGTTCAGAAGAGAACGGCCCTGGAATGTACACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: TKPSWEGILFRRERPWNVHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...TACATTCCAGGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGATGGCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570143.5
CDS-3UTR CCA 90 bp GTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: VQVLVIWNLIQVIPILKQQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...CTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000563877.5
ENST00000566132.5
ENST00000566194.5
ENST00000567388.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS-3UTR CCA 90 bp CAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCATCACTATGAGTCTCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: QMNTRRSIWIPAPHHYESQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...AGACTCATAGTGATGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000566132.5
ENST00000567388.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CATGCCTCTGGTGGTCACAGGACACTGAGTAAAGCAAGAGACTGGATACTTTCCGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HASGGHRTLSKARDWILSEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...GGAAAGTATCCAGTCTCTTGCTTTACTCAGTGTCCTGTGACCACCAGAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGACTTGCTCATCTTCTAGTCACCCCTTGTGGTAGAGCGAAAAGAGTGTGTTGTCAAGGGTCTAGGAGCTaGCTTAGGTCTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: RLAHLLVTPCGRAKRVCCQGSRS*LRSLLP
Trigger: GGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTG...ACAACACACTCTTTTCGCTCTACCACAAGGGGTGACTAGAAGATGAGCAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TGTCTGCAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTCTGCTGTTTGGGCTaGGGGCTGAAAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CLQVFSLATFVTHHKNQNFCCLG*GLKEAV
Trigger: CACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAGAA...ATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp CCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAGAATTAAGGCAAAGTGCTCAGAATGTTaGCCACTGCATAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PLLRKLSPAEHTALRIKAKCSEC*PLHRAA
Trigger: TGCAGCTCTATGCAGTGGCCAACATTCTGAGCACTT...TGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CCTCAGTCTAGGACAAAGCCCACACAGCTGTATACCCACTCTCACGAGTCCATTTGGTATTTTGGTATGTaGCCACTGGCCCTAAACAAC +
Preference number: 4 (lower is better)
Translates to: PQSRTKPTQLYTHSHESIWYFGM*PLALNN
Trigger: GTTGTTTAGGGCCAGTGGCCACATACCAAAATACCA...AATGGACTCGTGAGAGTGGGTATACAGCTGTGTGGGCTTTGTCCTAGACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCCTAGAATTAAGGCAGTTTaGCCCTGGGCACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: GFWKPGSCCIIKQPAMIPRIKAV*PWAHWW
Trigger: CCACCAATGTGCCCAGGGCCAAACTGCCTTAATTCT...AGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GGAGATGTTCTTGAGCTCTACAAGCATTTGCACAAAGTGCTCAGAATGTTGGCCTGGTACCACTCCTGCTaGGAGGTAAGCCTGGATACA +
Preference number: 4 (lower is better)
Translates to: GDVLELYKHLHKVLRMLAWYHSC*EVSLDT
Trigger: TGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCA...GGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp ATTCTTATAAATGTACAGAGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTGCAACCCCGCCCGTaGCGAAAGAGTGACCGGCCG +
Preference number: 4 (lower is better)
Translates to: ILINVQSCRSASQEFYRVVQPRP*RKSDRP
Trigger: CGGCCGGTCACTCTTTCGCCACGGGCGGGGTTGCAC...TACTCTATAGAACTCTTGGCTTGCACTTCTACAGCTCTGTACATTTATAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR CCA 90 bp TATAGAGTAGTACATAAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGAAACTGTCACCATGTaGGAGGACTGCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: YRVVHKHHMVPLLLGGKPETVTM*EDCLGL
Trigger: CAGGCCCAAGCAGTCCTCCCACATGGTGACAGTTTC...AGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTACTACTCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566132.5
CDS-3UTR TCA 90 bp TCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: SSLQTILELGRIEQTEFLAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...GAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp CAGCCTGGGCACAAGAGCTCCCTTTTTGCCTCCCTGAAGCACTATGACAAATACTTGCCCTTATTAAAGTaGCTTCTCCAAACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QPGHKSSLFASLKHYDKYLPLLK*LLQTLL
Trigger: GAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAA...GTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGGAGCTCTTGTGCCCAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp AGCCCCCAGATACTGTATATTCCTCTCAACCTTCCATGGTTTGAGAAAAACACAGACCCCAAGCTGGCATaGCTCTGGTCTCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: SPQILYIPLNLPWFEKNTDPKLA*LWSLSY
Trigger: ATAGGACAGAGACCAGAGTCATGCCAGCTTGGGGTC...TGTGTTTTTCTCAAACCATGGAAGGTTGAGAGGAATATACAGTATCTGGGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TATAGAGTAGTACATAAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTCTGGCCCTAAACAACTaGCCATTTCTACCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: YRVVHKHHMVPLLLGGKPLALNN*PFLPCL
Trigger: GAGGCAGGGTAGAAATGGTCAGTTGTTTAGGGCCAG...AGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTACTACTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLWKPGS*CIIKQP
Trigger: AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCA...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR GCA 90 bp TCTGCTGTGATGCTCCTAGCTAGTAGAGTAAGTCAGCCCCCAGATACTGTATATTCACACCCAGAGGTCTaGTTAAAGCCCAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: SAVMLLASRVSQPPDTVYSHPEV*LKPNPE
Trigger: CTCAGGATTGGGCTTTAAGCAGACCTCTGGGTGTGA...ATATACAGTATCTGGGGGCTGACTTACTCTACTAGCTAGGAGCATCACAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAGAATTAAGGCAAGCATTTGCACAAAGTaGTCAGAATGTTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: PLLRKLSPAEHTALRIKASICTK*SECWPL
Trigger: CAGTGGCCAACATTCTGAGCACTTTGTGCAAATGCT...TGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp GATTTCCTCAGGCAAGGGTCTAGGAGCTGGCTTAGGTCTCTCTTACCCTTCCTGAGCTCTACAAGCATTTaGACAAAGTGCTCAGAATGT +
Preference number: 4 (lower is better)
Translates to: DFLRQGSRSWLRSLLPFLSSTSI*TKCSEC
Trigger: ACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCT...CAGGAAGGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TGTCTGCAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTGTGTGAGCTATGAGTaGCCAACAGGGCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: CLQVFSLATFVTHHKNQNCVSYE*PTGLCR
Trigger: CCTACAGAGCCCTGTTGGCCACTCATAGCTCACACA...ATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGCAGGTCCAGGGATTCTaGAAGCCAGGATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QVFSLATFVTHHKNQNFLQVQGF*KPGSCC
Trigger: ACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTG...CAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGCCCCCAGATACTGTATATTCCTCTCAACCTTCCATGGTTTGAGAAAAACACAAAAACTGCAGGCTTCTaGGGCCAGCCCCAGTACCTT +
Preference number: 4 (lower is better)
Translates to: SPQILYIPLNLPWFEKNTKTAGF*GQPQYL
Trigger: AAGGTACTGGGGCTGGCCCCAGAAGCCTGCAGTTTT...TGTGTTTTTCTCAAACCATGGAAGGTTGAGAGGAATATACAGTATCTGGGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCAAGTAAAGCAAGAGACTaGATACTTTCCCATGTAGAA +
Preference number: 4 (lower is better)
Translates to: QTRITKLTRTVGPVGDAPSKARD*ILSHVE
Trigger: TTCTACATGGGAAAGTATCCAGTCTCTTGCTTTACT...TGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGTCTCATGGTCTCTGCAGATaGGGAAGGGGTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: VFSLATFVTHHKNQNFLSHGLCR*GRGSGW
Trigger: CCATCCAGAACCCCTTCCCCATCTGCAGAGACCATG...AGACAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGGTATTTTGGTATGTaGCCACTGGCCCTAAACAAC +
Preference number: 4 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLWYFGM*PLALNN
Trigger: GTTGTTTAGGGCCAGTGGCCACATACCAAAATACCA...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CACAAAGATAGATGTCCATCAGGCACTCACAGGATTACCATCGTAAGGATGGTTTGGTACCACTCCTGCTaGGAGGTAAGCCTGGATACA +
Preference number: 4 (lower is better)
Translates to: HKDRCPSGTHRITIVRMVWYHSC*EVSLDT
Trigger: TGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCA...AACCATCCTTACGATGGTAATCCTGTGAGTGCCTGATGGACATCTATCTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CTGGATACTTTCCCATGTAGAACCTATACCCCAATCCCGACTATTGGGCTGGGATACATAAACACCATATaGTACCACTCCTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LDTFPCRTYTPIPTIGLGYINTI*YHSCWE
Trigger: CTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTA...TCCCAGCCCAATAGTCGGGATTGGGGTATAGGTTCTACATGGGAAAGTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTTTCACTGACGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: PANHLRARKNRANGISRTFTDAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCGTCAGTGAA...AGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTGTTCACTGACGCAGCTTaGCTTGAATGGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: LQTILELGRIEQTEFLELFTDAA*LEWRVR
Trigger: GCGCACCCTCCATTCAAGCCAAGCTGCGTCAGTGAA...CAGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp AGCCCCCAGATACTGTATATTCCTCTCAACCTTCCATGGTTTGAGAAAAACACACACCTGCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: SPQILYIPLNLPWFEKNTHLLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTG...TGTGTTTTTCTCAAACCATGGAAGGTTGAGAGGAATATACAGTATCTGGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TCTTTAGCTCAAAGACTGGGTGAAGAAACTCACCCAGACCAAGGAAATACAAATGCTCACTGCACTGTGTaGGCTATGAGTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: SLAQRLGEETHPDQGNTNAHCTV*AMSGQQ
Trigger: CTGTTGGCCACTCATAGCTCACACAGTGCAGTGAGC...ATTTGTATTTCCTTGGTCTGGGTGAGTTTCTTCACCCAGTCTTTGAGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGCTTTCTAGGGGTCAGTaGCTTCAGTGCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: QVFSLATFVTHHKNQNFLLSRGQ*LQCSLH
Trigger: GTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAG...CAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATTGCCCTTATTAAAGTaGCTTCTCCAAACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLLPLLK*LLQTLL
Trigger: GAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAA...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR TCA 90 bp GGAGATGTTCTTGAGCTCTACAAGCATTTGCACAAAGTGCTCAGAATGTTGGCCCACTTTATGCTGTCTTaGAGGTCAAGCCTGCAAACC +
Preference number: 4 (lower is better)
Translates to: GDVLELYKHLHKVLRMLAHFMLS*RSSLQT
Trigger: GGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTG...GGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp GCCTCCCTGAAGCACTATGACAAATACCAATCAAGCTGTCTGCAAGTGTTTTCCCACTTTATGCTGTCTTaGAGGTCAAGCCTGCAAACC +
Preference number: 4 (lower is better)
Translates to: ASLKHYDKYQSSCLQVFSHFMLS*RSSLQT
Trigger: GGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTG...GGAAAACACTTGCAGACAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR TCA 90 bp CTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTGTCTACACTGGTGGACTaGTTTCCTCAGGCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LQTILELGRIEQTEFLELSTLVD*FPQARV
Trigger: GACCCTTGCCTGAGGAAATCAGTCCACCAGTGTAGA...CAGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTGAAGAGGGACAAACACTGTGCTACATTTaGTCCCTTTCCACATGTGCA +
Preference number: 4 (lower is better)
Translates to: QPAMIPVIVRQVQPEEGQTLCYI*SLSTCA
Trigger: TGCACATGTGGAAAGGGATCAAATGTAGCACAGTGT...TTGTCCCTCTTCAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR TCA 90 bp AGCCCCCAGATACTGTATATTCCTCTCAACCTTCCATGGTTTGAGAAAAACACACTGGCCCTAAACAACTaGCCATTTCTACCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SPQILYIPLNLPWFEKNTLALNN*PFLPCL
Trigger: GAGGCAGGGTAGAAATGGTCAGTTGTTTAGGGCCAG...TGTGTTTTTCTCAAACCATGGAAGGTTGAGAGGAATATACAGTATCTGGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR TCA 90 bp TGTCTGCAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATGTTCACCTCTGCAGATaGATACCCGGAGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: CLQVFSLATFVTHHKNQNVHLCR*IPGGVS
Trigger: AGATACTCCTCCGGGTATTCATCTGCAGAGGTGAAC...ATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570143.5
CDS-3UTR GCA 90 bp CAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGCAGGTAAGGGCTACCTaGAGGTCACTTTCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: QVFSLATFVTHHKNQNFLQVRAT*RSLSRG
Trigger: ACCCCTAGAAAGTGACCTGCAGGTAGCCCTTACCTG...CAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp TATCTCTCTGCTGTGATGCTCCTAGCTAGTAGAGTAAGTCAGCCCCCAGATACTTGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: YLSAVMLLASRVSQPPDTWKPGS*CIIKQP
Trigger: AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCA...AGTATCTGGGGGCTGACTTACTCTACTAGCTAGGAGCATCACAGCAGAGAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp TATGTGGCCACTGGCCCTAAACAACTGACCATTTCTACCCTGCCTCACTGCACTAGCTCTACAAGCATTTaGACAAAGTGCTCAGAATGT +
Preference number: 4 (lower is better)
Translates to: YVATGPKQLTISTLPHCTSSTSI*TKCSEC
Trigger: ACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCT...AGTGCAGTGAGGCAGGGTAGAAATGGTCAGTTGTTTAGGGCCAGTGGCCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: QGFWKPGSCCIIKQPAMIQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...GATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GACTCACTTTATGCTGTCTTGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: DSLYAVLKVKPANHLRAREGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...CCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAGAGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATGGAGGCCCTCTACACTaGTGGACTGATTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QSCRSASQEFYRVVHKHHGGPLH*WTDFLR
Trigger: CCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCC...ATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTAGTAAAGCAAGAGACTaGATACTTTCCCATGTAGAA +
Preference number: 4 (lower is better)
Translates to: PQVQGFWKPGSCCIIKQPSKARD*ILSHVE
Trigger: TTCTACATGGGAAAGTATCCAGTCTCTTGCTTTACT...AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GTCACCCCTTGTGGTAGAGCGAAAAGAGTGTGTTGTCCCTCTCATGCCTCTGGTAGTAAAGCAAGAGACTaGATACTTTCCCATGTAGAA +
Preference number: 4 (lower is better)
Translates to: VTPCGRAKRVCCPSHASGSKARD*ILSHVE
Trigger: TTCTACATGGGAAAGTATCCAGTCTCTTGCTTTACT...ACCAGAGGCATGAGAGGGACAACACACTCTTTTCGCTCTACCACAAGGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAGAGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATTCCCTCTCATGCCTCTaGTGGTCACAGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: QSCRSASQEFYRVVHKHHSLSCL*WSQDTE
Trigger: CTCAGTGTCCTGTGACCACCAGAGGCATGAGAGGGA...ATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp ATAGTTAGACAGGTGCAACCTGAAGAGGGACAAAAGGACTCACTTTATGCTGTCCCCTGGGCACATTGGTaGTATTTTGGTATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: IVRQVQPEEGQKDSLYAVPWAHW*YFGMWP
Trigger: TGGCCACATACCAAAATACCACCAATGTGCCCAGGG...GACAGCATAAAGTGAGTCCTTTTGTCCCTCTTCAGGTTGCACCTGTCTAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp GATATACTCTCCAATTTGTGGGTAGGGGGTGTCACAGCAGAAATTATGCCTATTTGGTACCACTCCTGCTaGGAGGTAAGCCTGGATACA +
Preference number: 4 (lower is better)
Translates to: DILSNLWVGGVTAEIMPIWYHSC*EVSLDT
Trigger: TGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCA...AATAGGCATAATTTCTGCTGTGACACCCCCTACCCACAAATTGGAGAGTATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp ATTTTCTGTCTTGCCCTTATTAAAGTGACTTCTCCAAACTCTGCTCCAACAGCAGTCCCGGTGCTTCTCTaGAAGTTAAAGGACCCGGGT +
Preference number: 4 (lower is better)
Translates to: IFCLALIKVTSPNSAPTAVPVLL*KLKDPG
Trigger: ACCCGGGTCCTTTAACTTCCAGAGAAGCACCGGGAC...TGCTGTTGGAGCAGAGTTTGGAGAAGTCACTTTAATAAGGGCAAGACAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565772.5
3UTR CAA 72 bp CCTGAAGAGGGACAAAAGGACTCACTTTATGCTGTCTaGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: PEEGQKDSLYAV*KVKPANHLRAR
Trigger: CCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTCCTTTTGTCCCTCTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR GCA 90 bp TATGCTGTCTTGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGATGTGCACTTCACCTCTaGAGACACAAGAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: YAVLKVKPANHLRARKNRCALHL*RHKKGL
Trigger: CAGGCCTTTCTTGTGTCTGCAGAGGTGAAGTGCACA...TCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR GCA 90 bp ATAGTTAGACAGGTGCAACCTGAAGAGGGACAAAAGGACTCACTTTATGCTGTCATCCCTTTCCACATGTaGACTTCACCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: IVRQVQPEEGQKDSLYAVIPFHM*TSPLQT
Trigger: TGTCTGCAGAGGTGAAGTGCACATGTGGAAAGGGAT...GACAGCATAAAGTGAGTCCTTTTGTCCCTCTTCAGGTTGCACCTGTCTAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR GCA 90 bp TCTCATGCCTCTGGTGGTCACAGGACACTGAGTAAAGCAAGAGACTGGATACTTTTATTACAACAACGATaGAGAGGGCCTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SHASGGHRTLSKARDWILLLQQR*RGPWFW
Trigger: CCAAAACCAAGGCCCTCTGCATCGTTGTTGTAATAA...AAGTATCCAGTCTCTTGCTTTACTCAGTGTCCTGTGACCACCAGAGGCATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp GTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGTCTATATGGTACCACTCCTaGTGGGAGGTAAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: VFSLATFVTHHKNQNFLSIWYHS*WEVSLD
Trigger: ATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATAT...AGACAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp CACAAAGATAGATGTCCATCAGGCACTCACAGGATTACCATCGTAAGGATGGTTGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HKDRCPSGTHRITIVRMVEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...AACCATCCTTACGATGGTAATCCTGTGAGTGCCTGATGGACATCTATCTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GTCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCTATCTAGCACAGCCTaGGCACAAGAGCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: VKPANHLRARKNRANGISLSSTA*AQELPF
Trigger: AAAAGGGAGCTCTTGTGCCCAGGCTGTGCTAGATAG...AGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp AGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATATGCAGGTCCAGGGATTCTaGAAGCCAGGATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SCRSASQEFYRVVHKHHMQVQGF*KPGSCC
Trigger: ACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTG...CATATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TCTTTAGCTCAAAGACTGGGTGAAGAAACTCACCCAGACCAAGGAAATACAAATCAAGGGTCTAGGAGCTaGCTTAGGTCTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: SLAQRLGEETHPDQGNTNQGSRS*LRSLLP
Trigger: GGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTG...ATTTGTATTTCCTTGGTCTGGGTGAGTTTCTTCACCCAGTCTTTGAGCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATATGTCCCGACTATTGGGCTaGGAACCCTGTCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: SCRSASQEFYRVVHKHHMSRLLG*EPCLCP
Trigger: TGGGCATAGACAGGGTTCCCAGCCCAATAGTCGGGA...CATATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp TTTATTAGACTTGCTCATCTTCTAGTCACCCCTTGTGGTAGAGCGAAAAGAGTGATGGGGAAGGGGTTCTaGATGGAGATGTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: FIRLAHLLVTPCGRAKRVMGKGF*MEMFLS
Trigger: GCTCAAGAACATCTCCATCCAGAACCCCTTCCCCAT...CACTCTTTTCGCTCTACCACAAGGGGTGACTAGAAGATGAGCAAGTCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CTGAGTAAAGCAAGAGACTGGATACTTTCCCATGTAGAACCTATACCCCAATCCACATTGGTGGTATTTTaGTATGTGGCCACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LSKARDWILSHVEPIPQSTLVVF*YVATGP
Trigger: AGGGCCAGTGGCCACATACCAAAATACCACCAATGT...GGATTGGGGTATAGGTTCTACATGGGAAAGTATCCAGTCTCTTGCTTTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGTCTTGGCCCTGGGCACATTaGTGGTATTTTGGTATGTGG +
Preference number: 4 (lower is better)
Translates to: VFSLATFVTHHKNQNFLSWPWAH*WYFGMW
Trigger: CCACATACCAAAATACCACCAATGTGCCCAGGGCCA...AGACAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp TCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCAGAAGAGAACGGCCCTaGAATGTACATGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSLQTILELGRIEQTEFLRRERP*NVHEGP
Trigger: AGGCCCTTCATGTACATTCCAGGGCCGTTCTCTTCT...GAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000570143.5
CDS-3UTR CCA 90 bp AGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAAAGAAGAGAACGGCCCTaGAATGTACATGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLQTILELGRIEQTEFLERRERP*NVHEGP
Trigger: AGGCCCTTCATGTACATTCCAGGGCCGTTCTCTTCT...TTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000570143.5
3UTR CAA 72 bp ACCTGTGTTGCTGTCTTTCTTTACACTGTGCTACATTaGATCCCTTTCCACATGTGCACTTCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TCVAVFLYTVLH*IPFHMCTSPLQ
Trigger: CTGCAGAGGTGAAGTGCACATGTGGAAAGGGATCAAATGTAGCACAGTGTAAAGAAAGACAGCAACACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
3UTR CAA 72 bp ATGAGTCTTCTAACCAAGCCATCCTGGGAAGGGATATaGTTCAGAAGAGAACGGCCCTGGAATGTACATGAA +
Preference number: 4 (lower is better)
Translates to: MSLLTKPSWEGI*FRRERPWNVHE
Trigger: TTCATGTACATTCCAGGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570143.5
CDS-3UTR TCA 90 bp TCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCCCCTTTTTGCCTCCCTaGAGCACTATGACAAATACC +
Preference number: 4 (lower is better)
Translates to: SSLQTILELGRIEQTEFLPFLPP*STMTNT
Trigger: GGTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGG...GAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp GTCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCCCTTTTTGCCTCCCTaGAGCACTATGACAAATACC +
Preference number: 4 (lower is better)
Translates to: VKPANHLRARKNRANGISPFLPP*STMTNT
Trigger: GGTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGG...AGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp TTTATTAGACTTGCTCATCTTCTAGTCACCCCTTGTGGTAGAGCGAAAAGAGTGCTTAAAGCCCAATCCTaGGTATCCAGTAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FIRLAHLLVTPCGRAKRVLKAQS*VSSKAH
Trigger: ATGGGCCTTACTGGATACTCAGGATTGGGCTTTAAG...CACTCTTTTCGCTCTACCACAAGGGGTGACTAGAAGATGAGCAAGTCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp ATGTTCTTGAGCTCTACAAGCATTTGCACAAAGTGCTCAGAATGTTGGCCACTGTGGAAGCCAGGATCCTaGTGTATCATTAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: MFLSSTSICTKCSECWPLWKPGS*CIIKQP
Trigger: AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCA...CAGTGGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CAGAGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATATATGGTACCACTCCTaGTGGGAGGTAAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: QSCRSASQEFYRVVHKHHIWYHS*WEVSLD
Trigger: ATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATAT...ATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTGCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LQTILELGRIEQTEFLELHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...CAGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp CAAGAGTTCTATAGAGTAGTACATAAACACCATATGGTACCACTCCTGCTGGGAAAGTGCTCAGAATGTTaGCCACTGCATAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QEFYRVVHKHHMVPLLLGKCSEC*PLHRAA
Trigger: TGCAGCTCTATGCAGTGGCCAACATTCTGAGCACTT...TCCCAGCAGGAGTGGTACCATATGGTGTTTATGTACTACTCTATAGAACTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp CAGAGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATTGGCCCTGGGCACATTaGTGGTATTTTGGTATGTGG +
Preference number: 4 (lower is better)
Translates to: QSCRSASQEFYRVVHKHHWPWAH*WYFGMW
Trigger: CCACATACCAAAATACCACCAATGTGCCCAGGGCCA...ATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GAGTTCTATAGAGTAGTACATAAACACCATATGGTACCACTCCTGCTGGGAGGTTACATAAACACCATATaGTACCACTCCTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EFYRVVHKHHMVPLLLGGYINTI*YHSCWE
Trigger: CTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTA...ACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTACTACTCTATAGAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR TCA 90 bp AGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTCCCTGAAGCACTATaGCAAATACCAATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLQTILELGRIEQTEFLELPEAL*QIPIKL
Trigger: CAGCTTGATTGGTATTTGTCATAGTGCTTCAGGGAG...TTCGAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR TCA 90 bp TCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGGATGGAGATGTTCTTaGGCTCTACAAGCATTTGCA +
Preference number: 4 (lower is better)
Translates to: SSLQTILELGRIEQTEFLGWRCS*ALQAFA
Trigger: TGCAAATGCTTGTAGAGCTCAAGAACATCTCCATCC...GAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR GCA 90 bp GATATACTCTCCAATTTGTGGGTAGGGGGTGTCACAGCAGAAATTATGCCTATTGACTTCTCCAAACTCTaGTCCAACAGCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DILSNLWVGGVTAEIMPIDFSKL*SNSRGK
Trigger: TTTTCCTCTGCTGTTGGAGCAGAGTTTGGAGAAGTC...AATAGGCATAATTTCTGCTGTGACACCCCCTACCCACAAATTGGAGAGTATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR GCA 90 bp GTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGTCTGACTTCTCCAAACTCTaGTCCAACAGCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VFSLATFVTHHKNQNFLSDFSKL*SNSRGK
Trigger: TTTTCCTCTGCTGTTGGAGCAGAGTTTGGAGAAGTC...AGACAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp TCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCGACTTCTCCAAACTCTaGTCCAACAGCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SSLQTILELGRIEQTEFLDFSKL*SNSRGK
Trigger: TTTTCCTCTGCTGTTGGAGCAGAGTTTGGAGAAGTC...GAGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR GCA 90 bp ATTCTTATAAATGTACAGAGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTGTTGTCCCTCTCATaGCTCTGGTGGTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: ILINVQSCRSASQEFYRVVLSLS*LWWSQD
Trigger: GTCCTGTGACCACCAGAGGCATGAGAGGGACAACAC...TACTCTATAGAACTCTTGGCTTGCACTTCTACAGCTCTGTACATTTATAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp CTTTACACTGTGCTACATTTGATCCCTTTCCACATGTGCACTTCACCTCTGCAGAGCTCTACAAGCATTTaGACAAAGTGCTCAGAATGT +
Preference number: 4 (lower is better)
Translates to: LYTVLHLIPFHMCTSPLQSSTSI*TKCSEC
Trigger: ACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCT...CTGCAGAGGTGAAGTGCACATGTGGAAAGGGATCAAATGTAGCACAGTGTAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp GTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGTCTCAAGTCCTCGTCATCTaGAATCTCATCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: VFSLATFVTHHKNQNFLSQVLVI*NLIQVI
Trigger: TATCACCTGGATGAGATTCCAGATGACGAGGACTTG...AGACAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CCA 90 bp AGCTGTATACCCACTCTCACGAGTCCATTGCTACTTCTCAAAAGTTTAAAAAGTTGGCCCTGGGCACATTaGTGGTATTTTGGTATGTGG +
Preference number: 4 (lower is better)
Translates to: SCIPTLTSPLLLLKSLKSWPWAH*WYFGMW
Trigger: CCACATACCAAAATACCACCAATGTGCCCAGGGCCA...ACTTTTTAAACTTTTGAGAAGTAGCAATGGACTCGTGAGAGTGGGTATACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATATGCACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SCRSASQEFYRVVHKHHMHQVFI*TLAKSS
Trigger: ACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTG...CATATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000569524.5
CDS-3UTR CCA 90 bp AGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATATGGAGGGTAATGTCTACTaGAGGGTACAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SCRSASQEFYRVVHKHHMEGNVY*RVQEEE
Trigger: CTCTTCTTCCTGTACCCTCCAGTAGACATTACCCTC...CATATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR TCA 90 bp ACCTGTTGGAAAAATTCTAGAAAGAGGCTTGGTATAGAGTATAGCAAGATATACGTAAGGCCCATGCTGTaGCCAGAAGAATCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TCWKNSRKRLGIEYSKIYVRPML*PEESGN
Trigger: ATTGCCAGATTCTTCTGGTCACAGCATGGGCCTTAC...GTATATCTTGCTATACTCTATACCAAGCCTCTTTCTAGAATTTTTCCAACAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR GCA 90 bp ATTGCATTTATTCTTATAAATGTACAGAGCTGTAGAAGTGCAAGCCAAGAGTTCATATGGTACCACTCCTaGTGGGAGGTAAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: IAFILINVQSCRSASQEFIWYHS*WEVSLD
Trigger: ATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATAT...GAACTCTTGGCTTGCACTTCTACAGCTCTGTACATTTATAAGAATAAATGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR TCA 90 bp ATTGCATTTATTCTTATAAATGTACAGAGCTGTAGAAGTGCAAGCCAAGAGTTCCCCTTTTTGCCTCCCTaGAGCACTATGACAAATACC +
Preference number: 4 (lower is better)
Translates to: IAFILINVQSCRSASQEFPFLPP*STMTNT
Trigger: GGTATTTGTCATAGTGCTTCAGGGAGGCAAAAAGGG...GAACTCTTGGCTTGCACTTCTACAGCTCTGTACATTTATAAGAATAAATGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CCA 90 bp ATTGCATTTATTCTTATAAATGTACAGAGCTGTAGAAGTGCAAGCCAAGAGTTCACATTGGTGGTATTTTaGTATGTGGCCACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: IAFILINVQSCRSASQEFTLVVF*YVATGP
Trigger: AGGGCCAGTGGCCACATACCAAAATACCACCAATGT...GAACTCTTGGCTTGCACTTCTACAGCTCTGTACATTTATAAGAATAAATGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS GCA 90 bp CTGGGCTCCGCGGTCGCCATGGCCGGGCCCCGCCCTGCCGGATGGTaGAACCCCGCCCGTGGCGAAAGAGTGACCGGCCGAGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: LGSAVAMAGPRPAGW*NPARGERVTGRGRG
Trigger: GCCTCTCCCTCGGCCGGTCACTCTTTCGCCACGGGCGGGGTTGCACCATCCGGCAGGGCGGGGCCCGGCCATGGCGACCGCGGAGCCCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562698.5
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000569761.1
CDS CCA 90 bp CCGCTGGGCTCCGCGGTCGCCATGGCCGGGCCCCGCCCTGCCGGATaGTGCAACCCCGCCCGTGGCGAAAGAGTGACCGGCCGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: PLGSAVAMAGPRPAG*CNPARGERVTGRGR
Trigger: TCTCCCTCGGCCGGTCACTCTTTCGCCACGGGCGGGGTTGCACCATCCGGCAGGGCGGGGCCCGGCCATGGCGACCGCGGAGCCCAGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562698.5
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000569761.1
CDS GCA 90 bp CTTGGCCAGGTCCCGGTGCTTCTGCAGCTTGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGGCCCCCGCTTTTCCACGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: LGQVPVLLQLGLNGG*ARHHVWPPLFHGRG
Trigger: CCCGCGGCCGTGGAAAAGCGGGGGCCATACATGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAAGCACCGGGACCTGGCCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357635.10
ENST00000562698.5
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
ENST00000564019.1
ENST00000564857.1
ENST00000566194.5
ENST00000566894.1
CDS-3UTR CAA 90 bp CACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCCTCCGCAGAACGGCCTaGGCCAGGTCCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: HSPDGGLWPEKQQVRATCLRRTA*ARSRCF
Trigger: GAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAG...GCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
CDS CCA 90 bp GGTTCGGCGAGGCCCCCAGCATGCCTTTTCTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCTGCAGCTTGGCTTGAATGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: GSARPPACLFSAERP*PGPGASAAWLEWRV
Trigger: CACCCTCCATTCAAGCCAAGCTGCAGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCTCGCCGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000357635.10
ENST00000562698.5
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
ENST00000564019.1
ENST00000564857.1
ENST00000566894.1
CDS CCA 90 bp GCCTTTTCTCCGCAGAACGGCCTTGGCCAGGTCCCGGTGCTTCTCTaGAAGTTAAAGGACCCGGGTCAGCCGGGTCTTCCCCACTCCGCC +
Preference number: 5 (lower is better)
Translates to: AFSPQNGLGQVPVLL*KLKDPGQPGLPHSA
Trigger: GGCGGAGTGGGGAAGACCCGGCTGACCCGGGTCCTTTAACTTCCAGAGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAGAAAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565772.5
CDS-3UTR CAA 90 bp GGGGTCCTGCCACCCTCACCCCTAGAAGCTGCTAAACACCCAGGCCATTCTGCCGGACGGTTGGACCAGTaGGGGATGCCCCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GVLPPSPLEAAKHPGHSAGRLDQ*GMPQVQ
Trigger: CTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCC...GGCAGAATGGCCTGGGTGTTTAGCAGCTTCTAGGGGTGAGGGTGGCAGGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS CCA 90 bp GGTTCGGCGAGGCCCCCAGCATGCCTTTTCTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCTCTGGAAGTTAAAGGACCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: GSARPPACLFSAERP*PGPGASLEVKGPGS
Trigger: TGACCCGGGTCCTTTAACTTCCAGAGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCTCGCCGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565772.5
CDS-3UTR CAA 90 bp CCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGTACAGGCTCCGCAGAACGGCCTaGGCCAGGTCCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PHGEQGPPWRVMSTGGYRLRRTA*ARSRCF
Trigger: GAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAG...CCTGTACCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000566194.5
CDS-3UTR CAA 90 bp CCTGAAGCAGCTGCCGGCTCACATCCTGGTTCACCTGCTGTCAGAGTCGAGGGACTGACGCAGCTTGGCTaGAATGGAGGGTGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: PEAAAGSHPGSPAVRVEGLTQLG*NGGCAR
Trigger: ACGCGCGCACCCTCCATTCAAGCCAAGCTGCGTCAG...TCCCTCGACTCTGACAGCAGGTGAACCAGGATGTGAGCCGGCAGCTGCTTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569761.1
CDS-3UTR CAA 90 bp CCTCTCCTCAGGAAACTGTCACCATGTGGGAGGACTGCTTGGGCCTGGGAGGTTAGAGACCCCGGACGGTaGGACCAGTTGGGGATGCCC +
Preference number: 5 (lower is better)
Translates to: PLLRKLSPCGRTAWAWEVRDPGR*DQLGMP
Trigger: GGGCATCCCCAACTGGTCCAACCGTCCGGGGTCTCT...AACCTCCCAGGCCCAAGCAGTCCTCCCACATGGTGACAGTTTCCTGAGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566132.5
CDS-3UTR CAA 90 bp TCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCTCCGCAGAACGGCCTaGGCCAGGTCCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: SWFTSADEYPEEYLDPSSLRRTA*ARSRCF
Trigger: GAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAG...GGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564019.1
ENST00000566194.5
CDS-3UTR CAA 90 bp GGGAAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGGGACGGTTGGACCAGTaGGGGATGCCCCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GKGKPESLNSPGRLDQLGGRLDQ*GMPQVQ
Trigger: CTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCC...CCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTTCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp TCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTCTTTCCGAACGGATTTaGAGGGGCGAGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SAHSPDGGLWPEKQQVRALSERI*RGESRL
Trigger: CAGCCTGCTCTCGCCCCTCAAAATCCGTTCGGAAAG...AGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565772.5
CDS-3UTR CAA 90 bp CCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTCTCCGCAGAACGGCCTaGGCCAGGTCCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PQVQGFWKPGSCCIIKQPLRRTA*ARSRCF
Trigger: GAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAG...AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
CDS-3UTR CAA 90 bp TGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTCCGCAGAACGGCCTaGGCCAGGTCCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: CPRSRDSGSQDPAVSLSNLRRTA*ARSRCF
Trigger: GAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAG...GTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
CDS-3UTR CAA 90 bp TTCACCTGCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTCCCCAGGACGGTTGGACCAGTaGGGGATGCCCCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: FTCSADEYPEEYLDPSSPGRLDQ*GMPQVQ
Trigger: CTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCC...TGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000563413.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GTGAGCTATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCCCAATCCCGACTATaGGGCTGGGAACCCTGTCTA +
Preference number: 5 (lower is better)
Translates to: VSYEWPTGLCRPHGEQGPPQSRL*GWEPCL
Trigger: TAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGGG...TGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATAGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CAA 90 bp CCTCAGTCTAGGACAAAGCCCACACAGCTGTATACCCACTCTCACGAGTCCATTCTCCGCAGAACGGCCTaGGCCAGGTCCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PQSRTKPTQLYTHSHESILRRTA*ARSRCF
Trigger: GAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAG...AATGGACTCGTGAGAGTGGGTATACAGCTGTGTGGGCTTTGTCCTAGACTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000563119.5
CDS-3UTR CAA 90 bp TTATGCCTATTTCTGCTGTTTGGGCTGGGGGCTGAAAGAGGCTGTGTCACACCCGGACGGTTGGACCAGTaGGGGATGCCCCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: LCLFLLFGLGAERGCVTPGRLDQ*GMPQVQ
Trigger: CTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCC...GGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAGAAATAGGCATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GGGCTACCTGCAGGTCACTTTCTAGGGGTCAGTGACTTCAGTGCTCACTGCACTAACTCACCCGGACGGTaGGACCAGTTGGGGATGCCC +
Preference number: 5 (lower is better)
Translates to: GLPAGHFLGVSDFSAHCTNSPGR*DQLGMP
Trigger: GGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTT...AGTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAGTGACCTGCAGGTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CAA 90 bp TGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGAGGGTAATGTCTACTGGAGGGCCCCAATCCCGACTATaGGGCTGGGAACCCTGTCTA +
Preference number: 5 (lower is better)
Translates to: CRPHGEQGPPWRVMSTGGPQSRL*GWEPCL
Trigger: TAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGGG...CCCTCCAGTAGACATTACCCTCCAAGGTGGGCCCTGCTCACCATGAGGCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569524.5
CDS-3UTR CAA 90 bp TCAGCCCACAGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTCACATTGGTGGTATTTaGGTATGTGGCCACTGGCCC +
Preference number: 5 (lower is better)
Translates to: SAHSPDGGLWPEKQQVRAHIGGI*VCGHWP
Trigger: GGGCCAGTGGCCACATACCAAAATACCACCAATGTG...AGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCTGTGGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CAA 90 bp GGGCTACCTGCAGGTCACTTTCTAGGGGTCAGTGACTTCAGTGCTCACTGCACTCTTCTGCAGCTTGGCTaGAATGGAGGGTGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: GLPAGHFLGVSDFSAHCTLLQLG*NGGCAR
Trigger: ACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAAG...AGTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAGTGACCTGCAGGTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000563069.5
CDS-3UTR CAA 90 bp CAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCCACTTCTGCAGCTTGGCTaGAATGGAGGGTGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: QTRITKLTRTVGPVGDAPLLQLG*NGGCAR
Trigger: ACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAAG...TGGGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
CDS-3UTR CAA 90 bp TGCCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACAACTCACCCGGACGGTaGGACCAGTTGGGGATGCCC +
Preference number: 5 (lower is better)
Translates to: CPRSRDSGSQDPAVSLSNNSPGR*DQLGMP
Trigger: GGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTT...GTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000569524.5
CDS-3UTR CAA 90 bp AAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGAACTCACCCGGACGGTaGGACCAGTTGGGGATGCCC +
Preference number: 5 (lower is better)
Translates to: KGKPESLNSPGRLDQLGMNSPGR*DQLGMP
Trigger: GGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTT...CATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CCCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTCTGACGCAGCTTGGCTaGAATGGAGGGTGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: PQVQGFWKPGSCCIIKQPLTQLG*NGGCAR
Trigger: ACGCGCGCACCCTCCATTCAAGCCAAGCTGCGTCAG...AGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563413.5
ENST00000569524.5
CDS-3UTR CAA 90 bp AAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTTCTGCAGCTTGGCTaGAATGGAGGGTGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: KHHMVPLLLGGKPGYTPLLLQLG*NGGCAR
Trigger: ACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAAG...GAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
CDS-3UTR CAA 90 bp TGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGAAACGCCTATTTCTGCTGTTaGGGCTGGGGGCTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: WYHSCWEVSLDTPLSSGNAYFCC*GWGLKE
Trigger: CTCTTTCAGCCCCCAGCCCAAACAGCAGAAATAGGC...GTTTCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCTGACGCAGCTTGGCTaGAATGGAGGGTGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: QVLVIWNLIQVIPILKQLLTQLG*NGGCAR
Trigger: ACGCGCGCACCCTCCATTCAAGCCAAGCTGCGTCAG...CAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563413.5
ENST00000563877.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS GCA 90 bp CACAGGGATAGGCAGAGTCCTCGCCCTGAAGGAGAAAGAATTGACTaGACTACTGACTTGCCTTCTCCCTGGTCACAGCCACCACTGCCT +
Preference number: 5 (lower is better)
Translates to: HRDRQSPRPEGERID*TTDLPSPWSQPPLP
Trigger: AGGCAGTGGTGGCTGTGACCAGGGAGAAGGCAAGTCAGTAGTGCAGTCAATTCTTTCTCCTTCAGGGCGAGGACTCTGCCTATCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS-3UTR CAA 90 bp TCACATCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCACTTCTGCAGCTTGGCTaGAATGGAGGGTGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: SHPGSPLQMNTRRSIWIPLLQLG*NGGCAR
Trigger: ACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAAG...TGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGATGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564019.1
ENST00000566194.5
CDS-3UTR CAA 90 bp GACTCACTTTATGCTGTCTTGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGCTCCGCAGAACGGCCTaGGCCAGGTCCCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: DSLYAVLKVKPANHLRARLRRTA*ARSRCF
Trigger: GAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAG...CCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
CDS-3UTR CAA 90 bp AGCCCAGATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGTCACTTTATGCTGTCTaGAAGGTCAAGCCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: SPDGGLWPEKQQVRATCRSLYAV*KVKPAN
Trigger: GTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGA...CCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCCCTGGACGGTTGGACCAGTaGGGGATGCCCCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GFWKPGSCCIIKQPAMIPGRLDQ*GMPQVQ
Trigger: CTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCC...AGGGATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CAA 90 bp AGCTTTTTCTACAAGGTAACACCCTCCTACATGGGGTCAGCCAGCTCAGAAACCAACTCACCCGGACGGTaGGACCAGTTGGGGATGCCC +
Preference number: 5 (lower is better)
Translates to: SFFYKVTPSYMGSASSETNSPGR*DQLGMP
Trigger: GGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTT...GGTTTCTGAGCTGGCTGACCCCATGTAGGAGGGTGTTACCTTGTAGAAAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp TGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCCTCTCCTCAGGAAACAGCGAAAAGAGTGTGTaGTCCCTCTCATGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: WYHSCWEVSLDTPLSSGNSEKSV*SLSCLW
Trigger: CCAGAGGCATGAGAGGGACAACACACTCTTTTCGCT...GTTTCCTGAGGAGAGGGGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp AGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTACTGACGCAGCTTGGCTaGAATGGAGGGTGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: RSRDSGSQDPAVSLSNLLLTQLG*NGGCAR
Trigger: ACGCGCGCACCCTCCATTCAAGCCAAGCTGCGTCAG...TAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563413.5
ENST00000569524.5
CDS GCA 90 bp TTGACTGCACTACTGACTTGCCTTCTCCCTGGTCACAGCCACCACTaGCTGCAGCTCCATGTACCTGGCTACAGTGCCTCAGAATGTGTA +
Preference number: 5 (lower is better)
Translates to: LTALLTCLLPGHSHH*LQLHVPGYSASECV
Trigger: TACACATTCTGAGGCACTGTAGCCAGGTACATGGAGCTGCAGGCAGTGGTGGCTGTGACCAGGGAGAAGGCAAGTCAGTAGTGCAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS CCA 90 bp CCTGAAGGAGAAAGAATTGACTGCACTACTGACTTGCCTTCTCCCTaGTCACAGCCACCACTGCCTGCAGCTCCATGTACCTGGCTACAG +
Preference number: 5 (lower is better)
Translates to: PEGERIDCTTDLPSP*SQPPLPAAPCTWLQ
Trigger: CTGTAGCCAGGTACATGGAGCTGCAGGCAGTGGTGGCTGTGACCAGGGAGAAGGCAAGTCAGTAGTGCAGTCAATTCTTTCTCCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS-3UTR CAA 90 bp CCTCTCCTCAGGAAACTGTCACCTGCAGAACACACAGCACTCAGAATTAAGGCACTTCTGCAGCTTGGCTaGAATGGAGGGTGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: PLLRKLSPAEHTALRIKALLQLG*NGGCAR
Trigger: ACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAAG...TGCCTTAATTCTGAGTGCTGTGTGTTCTGCAGGTGACAGTTTCCTGAGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000563119.5
CDS-3UTR CAA 90 bp TATGAGTGGCCAACAGGGCTCTGTAGGCCTCATGGTGAGCAGGGCCCACCTTGGTACACTGTGCTACATTaGATCCCTTTCCACATGTGC +
Preference number: 5 (lower is better)
Translates to: YEWPTGLCRPHGEQGPPWYTVLH*IPFHMC
Trigger: GCACATGTGGAAAGGGATCAAATGTAGCACAGTGTA...CCAAGGTGGGCCCTGCTCACCATGAGGCCTACAGAGCCCTGTTGGCCACTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CAA 90 bp GATGGGGGCCTCTGGCCTGAGAAGCAACAGGTAAGGGCTACCTGCAGGTCACTTGTCCCTCTACCTGTGTaGCTGTCTTTCTTTACACTG +
Preference number: 5 (lower is better)
Translates to: DGGLWPEKQQVRATCRSLVPLPV*LSFFTL
Trigger: CAGTGTAAAGAAAGACAGCAACACAGGTAGAGGGAC...AAGTGACCTGCAGGTAGCCCTTACCTGTTGCTTCTCAGGCCAGAGGCCCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CAA 90 bp GGCTGGGGGCTGAAAGAGGCTGTGTCACACCCAGAGGTCTGCTTAAAGCCCAATCTTCTTCAGGGACAGTaGCAGCTGAATATGCCAGAG +
Preference number: 5 (lower is better)
Translates to: GWGLKEAVSHPEVCLKPNLLQGQ*QLNMPE
Trigger: CTCTGGCATATTCAGCTGCAACTGTCCCTGAAGAAG...ATTGGGCTTTAAGCAGACCTCTGGGTGTGACACAGCCTCTTTCAGCCCCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCCCTTGGCCCTGGGCACATaGGTGGTATTTTGGTATGTG +
Preference number: 5 (lower is better)
Translates to: GKPESLNSPGRLDQLGMPLALGT*VVFWYV
Trigger: CACATACCAAAATACCACCAATGTGCCCAGGGCCAA...GGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGCTGCCGGCTTCCTGGGAAGGGATATaGTTCAGAAGAGAACGGCCC +
Preference number: 5 (lower is better)
Translates to: LVIWNLIQVIPILKQLPASWEGI*FRRERP
Trigger: GGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGA...AGCCGGCAGCTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563069.5
ENST00000564019.1
ENST00000567388.5
ENST00000570143.5
CDS-3UTR CAA 90 bp GGGCTACCTGCAGGTCACTTTCTAGGGGTCAGTGACTTCAGTGCTCACTGCACTTCCTGGGAAGGGATATaGTTCAGAAGAGAACGGCCC +
Preference number: 5 (lower is better)
Translates to: GLPAGHFLGVSDFSAHCTSWEGI*FRRERP
Trigger: GGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGA...AGTGCAGTGAGCACTGAAGTCACTGACCCCTAGAAAGTGACCTGCAGGTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000570143.5
CDS GCA 90 bp AACAAAAACAGGTCTAGCCATTCCCACACTGCTCTTCGTCCTCATTaGTGGGGACTCCAGCCACCATTCTCCTCCCTAACAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: NKNRSSHSHTALRPH*WGLQPPFSSLTEEE
Trigger: CTCCTCCTCTGTTAGGGAGGAGAATGGTGGCTGGAGTCCCCAGCAATGAGGACGAAGAGCAGTGTGGGAATGGCTAGACCTGTTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563706.5
ENST00000566894.1
CDS-3UTR CAA 90 bp GAGTTCTATAGAGTAGTACATAAACACCATATGGTACCACTCCTGCTGGGAGGTGGACGGTTGGACCAGTaGGGGATGCCCCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: EFYRVVHKHHMVPLLLGGGRLDQ*GMPQVQ
Trigger: CTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCC...ACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTACTACTCTATAGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000563671.5
ENST00000566132.5
ENST00000569524.5
CDS-3UTR CAA 90 bp AAGGGCAAACCAGAATCACTAAACTCACCCGGACGGTTGGACCAGTTGGGGATGCACATTGGTGGTATTTaGGTATGTGGCCACTGGCCC +
Preference number: 5 (lower is better)
Translates to: KGKPESLNSPGRLDQLGMHIGGI*VCGHWP
Trigger: GGGCCAGTGGCCACATACCAAAATACCACCAATGTG...CATCCCCAACTGGTCCAACCGTCCGGGTGAGTTTAGTGATTCTGGTTTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GAGTTCTATAGAGTAGTACATAAACACCATATGGTACCACTCCTGCTGGGAGGTCTGTCACCCGGACGGTaGGACCAGTTGGGGATGCCC +
Preference number: 5 (lower is better)
Translates to: EFYRVVHKHHMVPLLLGGLSPGR*DQLGMP
Trigger: GGGCATCCCCAACTGGTCCAACCGTCCGGGTGACAG...ACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTACTACTCTATAGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563671.5
CDS-3UTR CAA 90 bp CATCCTGGTTCACCTCTGCAGATGAATACCCGGAGGAGTATCTGGATCCCAGCTTCCTGGGAAGGGATATaGTTCAGAAGAGAACGGCCC +
Preference number: 5 (lower is better)
Translates to: HPGSPLQMNTRRSIWIPASWEGI*FRRERP
Trigger: GGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGA...AGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGGTGAACCAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564019.1
ENST00000567388.5
ENST00000570143.5
CDS CCA 90 bp AAAAACAGGTCTAGCCATTCCCACACTGCTCTTCGTCCTCATTGCTaGGGACTCCAGCCACCATTCTCCTCCCTAACAGAGGAGGAGAAT +
Preference number: 5 (lower is better)
Translates to: KNRSSHSHTALRPHC*GLQPPFSSLTEEEN
Trigger: ATTCTCCTCCTCTGTTAGGGAGGAGAATGGTGGCTGGAGTCCCCAGCAATGAGGACGAAGAGCAGTGTGGGAATGGCTAGACCTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563706.5
ENST00000566894.1
CDS-3UTR CAA 90 bp CAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGGGACGGTTGGACCAGTaGGGGATGCCCCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: QVFSLATFVTHHKNQNFLGRLDQ*GMPQVQ
Trigger: CTGGACCTGGGGCATCCCCAACTGGTCCAACCGTCC...CAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CAACCTGCTATGATCCCTGTCATAGTTAGACAGGTGCAACCTTGGAGGGTAATGCCCCAATCCCGACTATaGGGCTGGGAACCCTGTCTA +
Preference number: 5 (lower is better)
Translates to: QPAMIPVIVRQVQPWRVMPQSRL*GWEPCL
Trigger: TAGACAGGGTTCCCAGCCCAATAGTCGGGATTGGGG...CATTACCCTCCAAGGTTGCACCTGTCTAACTATGACAGGGATCATAGCAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563119.5
CDS-3UTR CAA 90 bp CCCAGGTCCAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGTTGGCCCTGGGCACATaGGTGGTATTTTGGTATGTG +
Preference number: 5 (lower is better)
Translates to: PRSRDSGSQDPAVSLSNLLALGT*VVFWYV
Trigger: CACATACCAAAATACCACCAATGTGCCCAGGGCCAA...CAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTGGACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp TTATGCCTATTTCTGCTGTTTGGGCTGGGGGCTGAAAGAGGCTGTGTCACACCCTTGGCCCTGGGCACATaGGTGGTATTTTGGTATGTG +
Preference number: 5 (lower is better)
Translates to: LCLFLLFGLGAERGCVTPLALGT*VVFWYV
Trigger: CACATACCAAAATACCACCAATGTGCCCAGGGCCAA...GGGTGTGACACAGCCTCTTTCAGCCCCCAGCCCAAACAGCAGAAATAGGCATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GTCCAAGTCCTCGTCATCTGGAATCTCATCCAGGTGATACCCATCCTGAAGCAGTCCTGGGAAGGGATATaGTTCAGAAGAGAACGGCCC +
Preference number: 5 (lower is better)
Translates to: VQVLVIWNLIQVIPILKQSWEGI*FRRERP
Trigger: GGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGA...CTGCTTCAGGATGGGTATCACCTGGATGAGATTCCAGATGACGAGGACTTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563069.5
ENST00000567388.5
ENST00000570143.5
CDS CCA 90 bp ACCAAGCCATCCTGGGAAGGGATATTGTTCAGAAGAGAACGGCCCTaGAATGTACATGAAGGGCCTTGGAGGAGACAGGGAACAAGCAAA +
Preference number: 5 (lower is better)
Translates to: TKPSWEGILFRRERP*NVHEGPWRRQGTSK
Trigger: TTTGCTTGTTCCCTGTCTCCTCCAAGGCCCTTCATGTACATTCCAGGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGATGGCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS-3UTR CAA 90 bp GCCACCTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTTCTTTACGAGCTCTACAAGCATTaGCACAAAGTGCTCAGAATG +
Preference number: 5 (lower is better)
Translates to: ATSQHTLGPSTCVAVFLYELYKH*HKVLRM
Trigger: CATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTC...GTAAAGAAAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GGTCCCTCCAGCTTTTTCTACAAGGTAACACCCTCCTACATGGGGTCAGCCAGCTACACTGTGCTACATTaGATCCCTTTCCACATGTGC +
Preference number: 5 (lower is better)
Translates to: GPSSFFYKVTPSYMGSASYTVLH*IPFHMC
Trigger: GCACATGTGGAAAGGGATCAAATGTAGCACAGTGTA...GCTGGCTGACCCCATGTAGGAGGGTGTTACCTTGTAGAAAAAGCTGGAGGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GTACATAAACACCATATGGTACCACTCCTGCTGGGAGGTAAGCCTGGATACACCCACATTGGTGGTATTTaGGTATGTGGCCACTGGCCC +
Preference number: 5 (lower is better)
Translates to: VHKHHMVPLLLGGKPGYTHIGGI*VCGHWP
Trigger: GGGCCAGTGGCCACATACCAAAATACCACCAATGTG...GGTGTATCCAGGCTTACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CAGAGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATAACTCACCCGGACGGTaGGACCAGTTGGGGATGCCC +
Preference number: 5 (lower is better)
Translates to: QSCRSASQEFYRVVHKHHNSPGR*DQLGMP
Trigger: GGGCATCCCCAACTGGTCCAACCGTCCGGGTGAGTT...ATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTTCTTTACACTGTGATATACTCTCCAATTaGTGGGTAGGGGGTGTCACA +
Preference number: 5 (lower is better)
Translates to: LPAHTGSLYLCCCLSLHCDILSN*WVGGVT
Trigger: TGTGACACCCCCTACCCACAAATTGGAGAGTATATC...ACAGTGTAAAGAAAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GGTCCCTCCAGCTTTTTCTACAAGGTAACACCCTCCTACATGGGGTCAGCCAGCACTCTCACGAGTCCATaGCTACTTCTCAAAAGTTTA +
Preference number: 5 (lower is better)
Translates to: GPSSFFYKVTPSYMGSASTLTSP*LLLKSL
Trigger: TAAACTTTTGAGAAGTAGCAATGGACTCGTGAGAGT...GCTGGCTGACCCCATGTAGGAGGGTGTTACCTTGTAGAAAAAGCTGGAGGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GAGTTCTATAGAGTAGTACATAAACACCATATGGTACCACTCCTGCTGGGAGGTGCCTATTTCTGCTGTTaGGGCTGGGGGCTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: EFYRVVHKHHMVPLLLGGAYFCC*GWGLKE
Trigger: CTCTTTCAGCCCCCAGCCCAAACAGCAGAAATAGGC...ACCTCCCAGCAGGAGTGGTACCATATGGTGTTTATGTACTACTCTATAGAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CTCCCAGCACACACTGGGTCCCTCTACCTGTGTTGCTGTCTTTCTTTACACTGTTGGATGGAGATGTTCTaGAGCTCTACAAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: LPAHTGSLYLCCCLSLHCWMEMF*SSTSIC
Trigger: GCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCA...ACAGTGTAAAGAAAGACAGCAACACAGGTAGAGGGACCCAGTGTGTGCTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTGGTCTCAAACAGTTTCTTTCTGACGCAGCTTGGCTaGAATGGAGGGTGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: LGRIEQTEFLELVSNSFFLTQLG*NGGCAR
Trigger: ACGCGCGCACCCTCCATTCAAGCCAAGCTGCGTCAG...AAAGAAACTGTTTGAGACCAGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569524.5
ENST00000570143.5
CDS-3UTR CAA 90 bp ATAGAGCTGCAGAGTCCCATTCCAGAACAGAGTAACCATCTGCCTCTCTTCCCAGAGCTCTACAAGCATTaGCACAAAGTGCTCAGAATG +
Preference number: 5 (lower is better)
Translates to: IELQSPIPEQSNHLPLFPELYKH*HKVLRM
Trigger: CATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTC...TGGGAAGAGAGGCAGATGGTTACTCTGTTCTGGAATGGGACTCTGCAGCTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS CCA 90 bp TCTAGAGCAGCACGATTACCTATGAGTCTTCTAACCAAGCCATCCTaGGAAGGGATATTGTTCAGAAGAGAACGGCCCTGGAATGTACAT +
Preference number: 5 (lower is better)
Translates to: SRAARLPMSLLTKPS*EGILFRRERPWNVH
Trigger: ATGTACATTCCAGGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCATAGGTAATCGTGCTGCTCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS-3UTR CAA 90 bp CAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCTCACTTTATGCTGTCTaGAAGGTCAAGCCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: QGFWKPGSCCIIKQPAMISLYAV*KVKPAN
Trigger: GTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGA...GATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GGAGATGTTCTTGAGCTCTACAAGCATTTGCACAAAGTGCTCAGAATGTTGGCCGATATACTCTCCAATTaGTGGGTAGGGGGTGTCACA +
Preference number: 5 (lower is better)
Translates to: GDVLELYKHLHKVLRMLADILSN*WVGGVT
Trigger: TGTGACACCCCCTACCCACAAATTGGAGAGTATATC...GGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CAAGTGTTTTCCTTAGCCACCTTTGTCACCCACCATAAGAACCAGAATTTTCTGAGCGAAAAGAGTGTGTaGTCCCTCTCATGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: QVFSLATFVTHHKNQNFLSEKSV*SLSCLW
Trigger: CCAGAGGCATGAGAGGGACAACACACTCTTTTCGCT...CAGAAAATTCTGGTTCTTATGGTGGGTGACAAAGGTGGCTAAGGAAAACACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CAA 90 bp CAGGGATTCTGGAAGCCAGGATCCTGCTGTATCATTAAGCAACCTGCTATGATCTACACTGTGCTACATTaGATCCCTTTCCACATGTGC +
Preference number: 5 (lower is better)
Translates to: QGFWKPGSCCIIKQPAMIYTVLH*IPFHMC
Trigger: GCACATGTGGAAAGGGATCAAATGTAGCACAGTGTA...GATCATAGCAGGTTGCTTAATGATACAGCAGGATCCTGGCTTCCAGAATCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS TCA 90 bp ATCTGGACTCTGGCTAAGAGCAGTATAGCCCTTGTTAAACTTCACTaGCCTTCACTTCTCCGAGTTTCAACCCTCATCTGTAAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: IWTLAKSSIALVKLH*PSLLRVSTLICKRR
Trigger: CCTCCTTTTACAGATGAGGGTTGAAACTCGGAGAAGTGAAGGTCAGTGAAGTTTAACAAGGGCTATACTGCTCTTAGCCAGAGTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563706.5
CDS-3UTR CAA 90 bp TTCCTGTCTGTAAGCCTCAGTCTAGGACAAAGCCCACACAGCTGTATACCCACTACTCTCACGAGTCCATaGCTACTTCTCAAAAGTTTA +
Preference number: 5 (lower is better)
Translates to: FLSVSLSLGQSPHSCIPTTLTSP*LLLKSL
Trigger: TAAACTTTTGAGAAGTAGCAATGGACTCGTGAGAGT...AGTGGGTATACAGCTGTGTGGGCTTTGTCCTAGACTGAGGCTTACAGACAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CAGAGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATAGCGAAAAGAGTGTGTaGTCCCTCTCATGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: QSCRSASQEFYRVVHKHHSEKSV*SLSCLW
Trigger: CCAGAGGCATGAGAGGGACAACACACTCTTTTCGCT...ATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GACTCACTTTATGCTGTCTTGAAGGTCAAGCCTGCAAACCATCTTAGAGCTAGGTGGATGGAGATGTTCTaGAGCTCTACAAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: DSLYAVLKVKPANHLRARWMEMF*SSTSIC
Trigger: GCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCA...CCTAGCTCTAAGATGGTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS-3UTR CAA 90 bp GGAGATGTTCTTGAGCTCTACAAGCATTTGCACAAAGTGCTCAGAATGTTGGCCTGGATGGAGATGTTCTaGAGCTCTACAAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: GDVLELYKHLHKVLRMLAWMEMF*SSTSIC
Trigger: GCAAATGCTTGTAGAGCTCAAGAACATCTCCATCCA...GGCCAACATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTCAAGAACATCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GTCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTCTTCTTCAGGGACAGTaGCAGCTGAATATGCCAGAG +
Preference number: 5 (lower is better)
Translates to: VKPANHLRARKNRANGISLLQGQ*QLNMPE
Trigger: CTCTGGCATATTCAGCTGCAACTGTCCCTGAAGAAG...AGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS TCA 90 bp GAGCCTGTGCACTCACAGAACTCCCTTATTCCGAAGCCCTTTATCTaGTCCTATCACATCCTTAAAGGAAAAGAGAGATTGTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: EPVHSQNSLIPKPFI*SYHILKGKERLFLF
Trigger: GAAGAGGAACAATCTCTCTTTTCCTTTAAGGATGTGATAGGATCAGATAAAGGGCTTCGGAATAAGGGAGTTCTGTGAGTGCACAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563706.5
ENST00000566894.1
CDS-3UTR CAA 90 bp AGCCCCCAGATACTGTATATTCCTCTCAACCTTCCATGGTTTGAGAAAAACACAGATATACTCTCCAATTaGTGGGTAGGGGGTGTCACA +
Preference number: 5 (lower is better)
Translates to: SPQILYIPLNLPWFEKNTDILSN*WVGGVT
Trigger: TGTGACACCCCCTACCCACAAATTGGAGAGTATATC...TGTGTTTTTCTCAAACCATGGAAGGTTGAGAGGAATATACAGTATCTGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp TCTTTAGCTCAAAGACTGGGTGAAGAAACTCACCCAGACCAAGGAAATACAAATCTTCTTCAGGGACAGTaGCAGCTGAATATGCCAGAG +
Preference number: 5 (lower is better)
Translates to: SLAQRLGEETHPDQGNTNLLQGQ*QLNMPE
Trigger: CTCTGGCATATTCAGCTGCAACTGTCCCTGAAGAAG...ATTTGTATTTCCTTGGTCTGGGTGAGTTTCTTCACCCAGTCTTTGAGCTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp GTCAAGCCTGCAAACCATCTTAGAGCTAGGAAGAATAGAGCAAACGGAATTTCTTCACTTTATGCTGTCTaGAAGGTCAAGCCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: VKPANHLRARKNRANGISSLYAV*KVKPAN
Trigger: GTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGA...AGAAATTCCGTTTGCTCTATTCTTCCTAGCTCTAAGATGGTTTGCAGGCTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000565772.5
ENST00000569524.5
CDS-3UTR CAA 90 bp ACAGTTGCAGCTGAATATGCCAGAGCTGATTATTACAACAACGATGCAGAGGGCACTCTCACGAGTCCATaGCTACTTCTCAAAAGTTTA +
Preference number: 5 (lower is better)
Translates to: TVAAEYARADYYNNDAEGTLTSP*LLLKSL
Trigger: TAAACTTTTGAGAAGTAGCAATGGACTCGTGAGAGT...GCCCTCTGCATCGTTGTTGTAATAATCAGCTCTGGCATATTCAGCTGCAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CAGAGCTGTAGAAGTGCAAGCCAAGAGTTCTATAGAGTAGTACATAAACACCATGTCCCTCTACCTGTGTaGCTGTCTTTCTTTACACTG +
Preference number: 5 (lower is better)
Translates to: QSCRSASQEFYRVVHKHHVPLPV*LSFFTL
Trigger: CAGTGTAAAGAAAGACAGCAACACAGGTAGAGGGAC...ATGGTGTTTATGTACTACTCTATAGAACTCTTGGCTTGCACTTCTACAGCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp TCTTTAGCTCAAAGACTGGGTGAAGAAACTCACCCAGACCAAGGAAATACAAATTCACTTTATGCTGTCTaGAAGGTCAAGCCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: SLAQRLGEETHPDQGNTNSLYAV*KVKPAN
Trigger: GTTTGCAGGCTTGACCTTCAAGACAGCATAAAGTGA...ATTTGTATTTCCTTGGTCTGGGTGAGTTTCTTCACCCAGTCTTTGAGCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563069.5
ENST00000569524.5
CDS-3UTR CAA 90 bp AGCTGTATACCCACTCTCACGAGTCCATTGCTACTTCTCAAAAGTTTAAAAAGTGTCCCTCTACCTGTGTaGCTGTCTTTCTTTACACTG +
Preference number: 5 (lower is better)
Translates to: SCIPTLTSPLLLLKSLKSVPLPV*LSFFTL
Trigger: CAGTGTAAAGAAAGACAGCAACACAGGTAGAGGGAC...ACTTTTTAAACTTTTGAGAAGTAGCAATGGACTCGTGAGAGTGGGTATACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357635.10
ENST00000563119.5
ENST00000569524.5
CDS-3UTR CAA 90 bp CTAGGAAGAATAGAGCAAACGGAATTTCTCGAACTGGTCTCAAACAGTTTCTTTGAGCTCTACAAGCATTaGCACAAAGTGCTCAGAATG +
Preference number: 5 (lower is better)
Translates to: LGRIEQTEFLELVSNSFFELYKH*HKVLRM
Trigger: CATTCTGAGCACTTTGTGCAAATGCTTGTAGAGCTC...AAAGAAACTGTTTGAGACCAGTTCGAGAAATTCCGTTTGCTCTATTCTTCCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357635.10
ENST00000569524.5
CDS GCA 72 bp GCGGTCGCCATGGCCGGGCCCCGCCCTGCCGGATGGTaGAACCCCGCCCGTGGCGAAAGAGTGACCGGCCGA +
Preference number: 6 (lower is better)
Translates to: AVAMAGPRPAGW*NPARGERVTGR
Trigger: TCGGCCGGTCACTCTTTCGCCACGGGCGGGGTTGCACCATCCGGCAGGGCGGGGCCCGGCCATGGCGACCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562698.5
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000569761.1
CDS CCA 72 bp CGGGCCCCGCCCTGCCGGATGGTGCAACCCCGCCCGTaGCGAAAGAGTGACCGGCCGAGGGAGAGGCGGGCT +
Preference number: 6 (lower is better)
Translates to: RAPPCRMVQPRP*RKSDRPRERRA
Trigger: AGCCCGCCTCTCCCTCGGCCGGTCACTCTTTCGCCACGGGCGGGGTTGCACCATCCGGCAGGGCGGGGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562698.5
ENST00000563069.5
ENST00000563877.5
ENST00000569524.5
ENST00000569761.1
CDS GCA 72 bp GTGCGCTCCCCCAGACGGAGGGCTCTATTACCGATCTaGCCGGAGGGTGGCCCCGCAGCTCCCGGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: VRSPRRRALLPI*PEGGPAAPGAR
Trigger: CCGCGCGCCGGGAGCTGCGGGGCCACCCTCCGGGCAGATCGGTAATAGAGCCCTCCGTCTGGGGGAGCGCAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000357635.10
ENST00000562698.5
ENST00000563069.5
ENST00000563119.5
ENST00000563413.5
ENST00000563671.5
ENST00000563877.5
ENST00000564019.1
ENST00000564857.1
ENST00000566194.5
ENST00000566894.1
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS GCA 72 bp CTGAAGAGTCTGGGCGGTTCGGCGAGGCCCCCAGCATaGCTTTTCTCCGCAGAACGGCCTTGGCCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: LKSLGGSARPPA*LFSAERPWPGP
Trigger: GGGACCTGGCCAAGGCCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCTCGCCGAACCGCCCAGACTCTTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357635.10
ENST00000562698.5
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
ENST00000564019.1
ENST00000564857.1
ENST00000565772.5
ENST00000566894.1
CDS TCA 72 bp GCACAGAGGAGGTGGCGCCTGCTGAGACCTTTTCCCTaGAGAGTCTGGGCGGTTCGGCGAGGCCCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: AQRRWRLLRPFP*RVWAVRRGPQH
Trigger: ATGCTGGGGGCCTCGCCGAACCGCCCAGACTCTTCAGGGAAAAGGTCTCAGCAGGCGCCACCTCCTCTGTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS CCA 72 bp TGGCCAGGTCCCGGTGCTTCTGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCATGTATGGCCCCCGCT +
Preference number: 6 (lower is better)
Translates to: WPGPGASAAWLE*RVRASPCMAPA
Trigger: AGCGGGGGCCATACATGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAAGCACCGGGACCTGGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357635.10
ENST00000562698.5
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
ENST00000564019.1
ENST00000564857.1
ENST00000566194.5
ENST00000566894.1
CDS CCA 72 bp CCGCAGAACGGCCTTGGCCAGGTCCCGGTGCTTCTCTaGAAGTTAAAGGACCCGGGTCAGCCGGGTCTTCCC +
Preference number: 6 (lower is better)
Translates to: PQNGLGQVPVLL*KLKDPGQPGLP
Trigger: GGGAAGACCCGGCTGACCCGGGTCCTTTAACTTCCAGAGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565772.5
CDS GCA 72 bp GTCCCGGTGCTTCTGCAGCTTGGCTTGAATGGAGGGTaGGCGCGTCACCATGTATGGCCCCCGCTTTTCCAC +
Preference number: 6 (lower is better)
Translates to: VPVLLQLGLNGG*ARHHVWPPLFH
Trigger: GTGGAAAAGCGGGGGCCATACATGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGCAGAAGCACCGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357635.10
ENST00000562698.5
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
ENST00000564019.1
ENST00000564857.1
ENST00000566194.5
ENST00000566894.1
CDS CCA 72 bp AGGCCCCCAGCATGCCTTTTCTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCTGCAGCTTGGCTTGAA +
Preference number: 6 (lower is better)
Translates to: RPPACLFSAERP*PGPGASAAWLE
Trigger: TTCAAGCCAAGCTGCAGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000357635.10
ENST00000562698.5
ENST00000563069.5
ENST00000563119.5
ENST00000563671.5
ENST00000564019.1
ENST00000564857.1
ENST00000566894.1
CDS CCA 72 bp AGGCCCCCAGCATGCCTTTTCTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCTCTGGAAGTTAAAGGA +
Preference number: 6 (lower is better)
Translates to: RPPACLFSAERP*PGPGASLEVKG
Trigger: TCCTTTAACTTCCAGAGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAGAAAAGGCATGCTGGGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565772.5
CDS GCA 72 bp CCCAGGCTGCAGTGCAGTGGCGCGATCTCGGCTCACTaGAATCTCCGCCTACCATGCTCAAGTGATTTTCCT +
Preference number: 6 (lower is better)
Translates to: PRLQCSGAISAH*NLRLPCSSDFP
Trigger: AGGAAAATCACTTGAGCATGGTAGGCGGAGATTGCAGTGAGCCGAGATCGCGCCACTGCACTGCAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS GCA 72 bp CTACTGACTTGCCTTCTCCCTGGTCACAGCCACCACTaGCTGCAGCTCCATGTACCTGGCTACAGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: LLTCLLPGHSHH*LQLHVPGYSAS
Trigger: TGAGGCACTGTAGCCAGGTACATGGAGCTGCAGGCAGTGGTGGCTGTGACCAGGGAGAAGGCAAGTCAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS CCA 72 bp CCCTTGTTAAACTTCACTGACGCAGCTTGGCTTGAATaGAGGGTGCGCGCGTCACCATGTATGGCCCCCGCT +
Preference number: 6 (lower is better)
Translates to: PLLNFTDAAWLE*RVRASPCMAPA
Trigger: AGCGGGGGCCATACATGGTGACGCGCGCACCCTCCATTCAAGCCAAGCTGCGTCAGTGAAGTTTAACAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000563413.5
ENST00000563877.5
ENST00000569524.5
ENST00000569761.1
ENST00000570143.5
CDS CCA 72 bp AGCTCGGCCTTAAACCAGAGCACCCTGCCTCCGTCCTaGGGATTAAAGCCTTCTCTAAAGCTGCTGGCACAG +
Preference number: 6 (lower is better)
Translates to: SSALNQSTLPPS*GLKPSLKLLAQ
Trigger: CTGTGCCAGCAGCTTTAGAGAAGGCTTTAATCCCCAGGACGGAGGCAGGGTGCTCTGGTTTAAGGCCGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS CAA 90 bp CAGGGAACAAGCAAAGGCATCAGGCGATCTTCAGTCCCAGCCAAGTaGCTTCCCAAGGGGGTATTTCCAAGGGGAGCACTCACCTGTCAG +
Preference number: 6 (lower is better)
Translates to: QGTSKGIRRSSVPAK*LPKGVFPRGALTCQ
Trigger: CTGACAGGTGAGTGCTCCCCTTGGAAATACCCCCTTGGGAAGCAACTTGGCTGGGACTGAAGATCGCCTGATGCCTTTGCTTGTTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS CAA 72 bp AGCAAAGGCATCAGGCGATCTTCAGTCCCAGCCAAGTaGCTTCCCAAGGGGGTATTTCCAAGGGGAGCACTC +
Preference number: 6 (lower is better)
Translates to: SKGIRRSSVPAK*LPKGVFPRGAL
Trigger: GAGTGCTCCCCTTGGAAATACCCCCTTGGGAAGCAACTTGGCTGGGACTGAAGATCGCCTGATGCCTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS CAA 72 bp CGCCCTGAAGGAGAAAGAATTGACTGCACTACTGACTaGCCTTCTCCCTGGTCACAGCCACCACTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: RPEGERIDCTTD*PSPWSQPPLPA
Trigger: TGCAGGCAGTGGTGGCTGTGACCAGGGAGAAGGCAAGTCAGTAGTGCAGTCAATTCTTTCTCCTTCAGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS GCA 72 bp AGGCAGAGTCCTCGCCCTGAAGGAGAAAGAATTGACTaGACTACTGACTTGCCTTCTCCCTGGTCACAGCCA +
Preference number: 6 (lower is better)
Translates to: RQSPRPEGERID*TTDLPSPWSQP
Trigger: TGGCTGTGACCAGGGAGAAGGCAAGTCAGTAGTGCAGTCAATTCTTTCTCCTTCAGGGCGAGGACTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS CCA 72 bp TTAAACTTCACTGACCTTTTCTCCGCAGAACGGCCTTaGCCAGGTCCCGGTGCTTCTGCAGCTTGGCTTGAA +
Preference number: 6 (lower is better)
Translates to: LNFTDLFSAERP*PGPGASAAWLE
Trigger: TTCAAGCCAAGCTGCAGAAGCACCGGGACCTGGCCAAGGCCGTTCTGCGGAGAAAAGGTCAGTGAAGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566194.5
CDS CCA 72 bp GAAAGAATTGACTGCACTACTGACTTGCCTTCTCCCTaGTCACAGCCACCACTGCCTGCAGCTCCATGTACC +
Preference number: 6 (lower is better)
Translates to: ERIDCTTDLPSP*SQPPLPAAPCT
Trigger: GGTACATGGAGCTGCAGGCAGTGGTGGCTGTGACCAGGGAGAAGGCAAGTCAGTAGTGCAGTCAATTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS CAA 72 bp GGGATAGGCAGAGTCCTCGCCCTGAAGGAGAAAGAATaGACTGCACTACTGACTTGCCTTCTCCCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: GIGRVLALKEKE*TALLTCLLPGH
Trigger: GTGACCAGGGAGAAGGCAAGTCAGTAGTGCAGTCAATTCTTTCTCCTTCAGGGCGAGGACTCTGCCTATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS CAA 90 bp CATTTCACAGGGATAGGCAGAGTCCTCGCCCTGAAGGAGAAAGAATaGACTGCACTACTGACTTGCCTTCTCCCTGGTCACAGCCACCAC +
Preference number: 6 (lower is better)
Translates to: HFTGIGRVLALKEKE*TALLTCLLPGHSHH
Trigger: GTGGTGGCTGTGACCAGGGAGAAGGCAAGTCAGTAGTGCAGTCAATTCTTTCTCCTTCAGGGCGAGGACTCTGCCTATCCCTGTGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS CCA 72 bp GAGAAGAGGAAAACAGTCAGTTCCGGGAGGTACCTGTaGTGCACAGCTGTAAATCATCAGGCGGAGAGCATG +
Preference number: 6 (lower is better)
Translates to: EKRKTVSSGRYL*CTAVNHQAESM
Trigger: CATGCTCTCCGCCTGATGATTTACAGCTGTGCACCACAGGTACCTCCCGGAACTGACTGTTTTCCTCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS CCA 72 bp TGGTCACAGCCACCACTGCCTGCAGCTCCATGTACCTaGCTACAGTGCCTCAGAATGTGTATGTTCTCATTC +
Preference number: 6 (lower is better)
Translates to: WSQPPLPAAPCT*LQCLRMCMFSF
Trigger: GAATGAGAACATACACATTCTGAGGCACTGTAGCCAGGTACATGGAGCTGCAGGCAGTGGTGGCTGTGACCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566894.1
CDS GCA 72 bp AAGAGGAAAACAGTCAGTTCCGGGAGGTACCTGTGGTaGACAGCTGTAAATCATCAGGCGGAGAGCATGCAA +
Preference number: 6 (lower is better)
Translates to: KRKTVSSGRYLW*TAVNHQAESMQ
Trigger: TTGCATGCTCTCCGCCTGATGATTTACAGCTGTGCACCACAGGTACCTCCCGGAACTGACTGTTTTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS CCA 72 bp TCACCTGCTCTGCAGATGAATACCCGGAGGAGTATCTaGATCCCAGCTCCCCATCACTATGAGTCTTCTAAC +
Preference number: 6 (lower is better)
Translates to: SPALQMNTRRSI*IPAPHHYESSN
Trigger: GTTAGAAGACTCATAGTGATGGGGAGCTGGGATCCAGATACTCCTCCGGGTATTCATCTGCAGAGCAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563069.5
ENST00000566132.5
CDS CCA 72 bp GGCCCTGTCAGAGTCGAGGGACACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGTATAGCCCTTGTTAAA +
Preference number: 6 (lower is better)
Translates to: GPVRVEGHQVFI*TLAKSSIALVK
Trigger: TTTAACAAGGGCTATACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564019.1
CDS CAA 72 bp ATGAGTCTTCTAACCAAGCCATCCTGGGAAGGGATATaGTTCAGAAGAGAACGGCCCTGTCAGAGTCGAGGG +
Preference number: 6 (lower is better)
Translates to: MSLLTKPSWEGI*FRRERPCQSRG
Trigger: CCCTCGACTCTGACAGGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564019.1
CDS CAA 90 bp TGTAAATCATCAGGCGGAGAGCATGCAAGGGCATCTGGAAGACTTTaGAAGCAAAGGCCACACACAACAGAACTCAAGTCCGAACAGGCC +
Preference number: 6 (lower is better)
Translates to: CKSSGGEHARASGRL*KQRPHTTELKSEQA
Trigger: GGCCTGTTCGGACTTGAGTTCTGTTGTGTGTGGCCTTTGCTTCAAAAGTCTTCCAGATGCCCTTGCATGCTCTCCGCCTGATGATTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS TCA 72 bp GGCCACACACAACAGAACTCAAGTCCGAACAGGCCTTaGATAATACTGGTTCCCTCAATTGGTTCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: GHTQQNSSPNRP*IILVPSIGSGR
Trigger: CCTGCCAGAACCAATTGAGGGAACCAGTATTATTCAAGGCCTGTTCGGACTTGAGTTCTGTTGTGTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS CCA 72 bp CTCCCCATCACTATGAGTCTTCTAACCAAGCCATCCTaGGAAGGGATATTGTTCAGAAGAGAACGGCCCTGT +
Preference number: 6 (lower is better)
Translates to: LPITMSLLTKPS*EGILFRRERPC
Trigger: ACAGGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCATAGTGATGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564019.1
CDS CCA 72 bp GCACGATTACCTATGAGTCTTCTAACCAAGCCATCCTaGGAAGGGATATTGTTCAGAAGAGAACGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: ARLPMSLLTKPS*EGILFRRERPW
Trigger: CCAGGGCCGTTCTCTTCTGAACAATATCCCTTCCCAGGATGGCTTGGTTAGAAGACTCATAGGTAATCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS CAA 90 bp TTGAAGCAAAGGCCACACACAACAGAACTCAAGTCCGAACAGGCCTaGAATAATACTGGTTCCCTCAATTGGTTCTGGCAGGGACAGGGT +
Preference number: 6 (lower is better)
Translates to: LKQRPHTTELKSEQA*NNTGSLNWFWQGQG
Trigger: ACCCTGTCCCTGCCAGAACCAATTGAGGGAACCAGTATTATTCAAGGCCTGTTCGGACTTGAGTTCTGTTGTGTGTGGCCTTTGCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS GCA 72 bp CCTCTTCCCATTTTAAAGATAGTGAACCTGACAGGTTaGATCAGGGGAATCGCTAGCTCGGCCTTAAACCAG +
Preference number: 6 (lower is better)
Translates to: PLPILKIVNLTG*IRGIASSALNQ
Trigger: CTGGTTTAAGGCCGAGCTAGCGATTCCCCTGATGCAACCTGTCAGGTTCACTATCTTTAAAATGGGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563706.5
ENST00000566894.1
CDS CCA 72 bp TCACCTGTCAGAGTCGAGGGACACCAGGTTTTCATCTaGACTCTGGCTAAGAGCAGTATAGCCCTTGTTAAA +
Preference number: 6 (lower is better)
Translates to: SPVRVEGHQVFI*TLAKSSIALVK
Trigger: TTTAACAAGGGCTATACTGCTCTTAGCCAGAGTCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS CAA 72 bp AGGCCACACACAACAGAACTCAAGTCCGAACAGGCCTaGAATAATACTGGTTCCCTCAATTGGTTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: RPHTTELKSEQA*NNTGSLNWFWQ
Trigger: CTGCCAGAACCAATTGAGGGAACCAGTATTATTCAAGGCCTGTTCGGACTTGAGTTCTGTTGTGTGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564857.1
ENST00000566894.1
CDS TCA 72 bp CTGGCTAAGAGCAGTATAGCCCTTGTTAAACTTCACTaGCCTTCACTTCTCCGAGTTTCAACCCTCATCTGT +
Preference number: 6 (lower is better)
Translates to: LAKSSIALVKLH*PSLLRVSTLIC
Trigger: ACAGATGAGGGTTGAAACTCGGAGAAGTGAAGGTCAGTGAAGTTTAACAAGGGCTATACTGCTCTTAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563706.5
CDS TCA 72 bp CACTCACAGAACTCCCTTATTCCGAAGCCCTTTATCTaGTCCTATCACATCCTTAAAGGAAAAGAGAGATTG +
Preference number: 6 (lower is better)
Translates to: HSQNSLIPKPFI*SYHILKGKERL
Trigger: CAATCTCTCTTTTCCTTTAAGGATGTGATAGGATCAGATAAAGGGCTTCGGAATAAGGGAGTTCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563706.5
ENST00000566894.1
CDS CAA 72 bp ACTTATTTAATCAGAGGACACAAAAACTGCAAGTCTTaGGGTAAAAGGTTAGGGTTAACCTTCACTTCTCCG +
Preference number: 6 (lower is better)
Translates to: TYLIRGHKNCKS*GKRLGLTFTSP
Trigger: CGGAGAAGTGAAGGTTAACCCTAACCTTTTACCCAAAGACTTGCAGTTTTTGTGTCCTCTGATTAAATAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566894.1