RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM217B (Homo sapiens)

Ensembl gene IDs: ENSG00000196227

Ensembl transcript IDs: ENST00000358293.7, ENST00000360816.8, ENST00000421092.1, ENST00000469084.5

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGGTAACACCACTAGCTGCTCTACACAGACCGGCTACTGTAGCTaGGGTTTCACTGACACTTTCCCTGGAGAGGTGCCATTTTATTCC +
Preference number: 1 (lower is better)
Translates to: GGNTTSCSTQTGYCS*GFTDTFPGEVPFYS
Trigger: GGAATAAAATGGCACCTCTCCAGGGAAAGTGTCAGTGAAACCTCAGCTACAGTAGCCGGTCTGTGTAGAGCAGCTAGTGGTGTTACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 90 bp CACCATTTGAAACAGTCTGCACTATTTCATATACTTACGTGCATGTaGAAATGGGGAGGTAACACCACTAGCTGCTCTACACAGACCGGC +
Preference number: 1 (lower is better)
Translates to: HHLKQSALFHILTCM*KWGGNTTSCSTQTG
Trigger: GCCGGTCTGTGTAGAGCAGCTAGTGGTGTTACCTCCCCATTTTCACATGCACGTAAGTATATGAAATAGTGCAGACTGTTTCAAATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 90 bp TACCCTCAACCATTCAAGGTCTCTAAGAGCATGCACATGGATACATaGCGGGGAAAGGCAGCAACTCAGCATAAACACTTTAGTATTAAC +
Preference number: 1 (lower is better)
Translates to: YPQPFKVSKSMHMDT*RGKAATQHKHFSIN
Trigger: GTTAATACTAAAGTGTTTATGCTGAGTTGCTGCCTTTCCCCGTCATGTATCCATGTGCATGCTCTTAGAGACCTTGAATGGTTGAGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR GCA 90 bp CTAATAAATCACTTTACCCTCAACCATTCAAGGTCTCTAAGAGCATaGACATGGATACATGACGGGGAAAGGCAGCAACTCAGCATAAAC +
Preference number: 1 (lower is better)
Translates to: LINHFTLNHSRSLRA*TWIHDGERQQLSIN
Trigger: GTTTATGCTGAGTTGCTGCCTTTCCCCGTCATGTATCCATGTGCATGCTCTTAGAGACCTTGAATGGTTGAGGGTAAAGTGATTTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR CCA 90 bp AATCACTTTACCCTCAACCATTCAAGGTCTCTAAGAGCATGCACATaGATACATGACGGGGAAAGGCAGCAACTCAGCATAAACACTTTA +
Preference number: 1 (lower is better)
Translates to: NHFTLNHSRSLRACT*IHDGERQQLSINTL
Trigger: TAAAGTGTTTATGCTGAGTTGCTGCCTTTCCCCGTCATGTATCCATGTGCATGCTCTTAGAGACCTTGAATGGTTGAGGGTAAAGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 90 bp AGGGCTCTCATTTGCCTAAGACTGACAATACAAAGAAAGGCTTATTaGAAGACACTTCCCTTTGAAAATAACCCCACTCAGGGTAGAAAT +
Preference number: 1 (lower is better)
Translates to: RALICLRLTIQRKAY*KTLPFENNPTQGRN
Trigger: ATTTCTACCCTGAGTGGGGTTATTTTCAAAGGGAAGTGTCTTTCAATAAGCCTTTCTTTGTATTGTCAGTCTTAGGCAAATGAGAGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 90 bp GGGCAAGAAGGACCTTATTTTAAACATTTAGGATTCCACACCATTTaGAACAGTCTGCACTATTTCATATACTTACGTGCATGTGAAAAT +
Preference number: 1 (lower is better)
Translates to: GQEGPYFKHLGFHTI*NSLHYFIYLRACEN
Trigger: ATTTTCACATGCACGTAAGTATATGAAATAGTGCAGACTGTTTCAAATGGTGTGGAATCCTAAATGTTTAAAATAAGGTCCTTCTTGCCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR GCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCGGTAACACCACTAGCTaGTCTACACAGACCGGCTAC +
Preference number: 2 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCGNTTS*STQTGY
Trigger: GTAGCCGGTCTGTGTAGAGCAGCTAGTGGTGTTACC...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCATACTTACGTGCATGTaGAAATGGGGAGGTAACACC +
Preference number: 2 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCILTCM*KWGGNT
Trigger: GGTGTTACCTCCCCATTTTCACATGCACGTAAGTAT...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGCAATGGCACGATCTTaGCTCACCACAACCTCCGCC +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYAMARS*LTTTSA
Trigger: GGCGGAGGTTGTGGTGAGCCAAGATCGTGCCATTGC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACCCTGGGGTGCCTCTCTaGAGAAGCTTTACATGCCAG +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYPGVPL*RSFTCQ
Trigger: CTGGCATGTAAAGCTTCTCCAGAGAGGCACCCCAGG...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCCAAAGAAAGGCTTATTaGAAGACACTTCCCTTTGAA +
Preference number: 2 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCQRKAY*KTLPFE
Trigger: TTCAAAGGGAAGTGTCTTTCAATAAGCCTTTCTTTG...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACACCGGCTACTGTAGCTaGGGTTTCACTGACACTTTC +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYTGYCS*GFTDTF
Trigger: GAAAGTGTCAGTGAAACCTCAGCTACAGTAGCCGGT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGAGAGTTGGGAAGCCTaGAGACCAGATAAGCGAGTT +
Preference number: 2 (lower is better)
Translates to: FSSDIHKASRITNKSLYPESWEA*RPDKRV
Trigger: AACTCGCTTATCTGGTCTTCAGGCTTCCCAACTCTC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTATGCACATGGATACATaGCGGGGAAAGGCAGCAACT +
Preference number: 2 (lower is better)
Translates to: FSSDIHKASRITNKSLYPMHMDT*RGKAAT
Trigger: AGTTGCTGCCTTTCCCCGTCATGTATCCATGTGCAT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR GCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACAGGTCTCTAAGAGCATaGACATGGATACATGACGGG +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYRSLRA*TWIHDG
Trigger: CCCGTCATGTATCCATGTGCATGCTCTTAGAGACCT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACCTAAGAGCATGCACATaGATACATGACGGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYLRACT*IHDGER
Trigger: CCTTTCCCCGTCATGTATCCATGTGCATGCTCTTAG...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR CAA 90 bp AGGAGGTATATGGCAAGACCAATGATATTCTCTTCCCCATCCTTTTaGTCACAGGGTATGAAGTCTATCCTATTCAAGTTAGTTACAAGT +
Preference number: 2 (lower is better)
Translates to: RRYMARPMIFSSPSF*SQGMKSILFKLVTS
Trigger: ACTTGTAACTAACTTGAATAGGATAGACTTCATACCCTGTGACAAAAAGGATGGGGAAGAGAATATCATTGGTCTTGCCATATACCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACCACTACTCCCTGACTTaGGGAAGAACTAAAGCTTCT +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYHYSLT*GRTKAS
Trigger: AGAAGCTTTAGTTCTTCCTCAAGTCAGGGAGTAGTG...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTCACTACTCCCTGACTTaGGGAAGAACTAAAGCTTCT +
Preference number: 2 (lower is better)
Translates to: FSSDIHKASRITNKSLYPHYSLT*GRTKAS
Trigger: AGAAGCTTTAGTTCTTCCTCAAGTCAGGGAGTAGTG...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTAAACTCACTACTCCCTaGCTTGAGGAAGAACTAAAG +
Preference number: 2 (lower is better)
Translates to: FSSDIHKASRITNKSLYPKLTTP*LEEELK
Trigger: CTTTAGTTCTTCCTCAAGTCAGGGAGTAGTGAGTTT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTACACTGCGCAAATATaGACAGAAAACTCACAGCAC +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYYTAQI*TENSQH
Trigger: GTGCTGTGAGTTTTCTGTTCATATTTGCGCAGTGTA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACAATATCTATGGGCCATaGAACTTCATAGAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYNIYGP*NFIESC
Trigger: GCAGCTCTCTATGAAGTTTCATGGCCCATAGATATT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACATATGGCAAGACCAATaGTATTCTCTTCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYIWQDQ*YSLPHP
Trigger: AGGATGGGGAAGAGAATATCATTGGTCTTGCCATAT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGTGAGCATAAAGGAATaGGGAAGTAGACGATATCCA +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYVSIKE*GSRRYP
Trigger: TGGATATCGTCTACTTCCTCATTCCTTTATGCTCAC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR GCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTGGAGAAGCTTTACATaGCAGCAATTCCAGAATGTC +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYWRSFT*QQFQNV
Trigger: GACATTCTGGAATTGCTGGCATGTAAAGCTTCTCCA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR GCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTTGGAGAAGCTTTACATaGCAGCAATTCCAGAATGTC +
Preference number: 2 (lower is better)
Translates to: FSSDIHKASRITNKSLYPWRSFT*QQFQNV
Trigger: GACATTCTGGAATTGCTGGCATGTAAAGCTTCTCCA...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR CAA 90 bp CACCTCATGTTATTCACTAGGAGCTATGATCTAGTCGTGACAATATaGGTTAAAATAGTCAATCTGAGGCAGAAAGTAAACAAGCAAAGT +
Preference number: 2 (lower is better)
Translates to: HLMLFTRSYDLVVTI*VKIVNLRQKVNKQS
Trigger: ACTTTGCTTGTTTACTTTCTGCCTCAGATTGACTATTTTAACCAATATTGTCACGACTAGATCATAGCTCCTAGTGAATAACATGAGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTACAGATCATTATTTTTaGCTAAGGACCACAGGGTGT +
Preference number: 2 (lower is better)
Translates to: FSSDIHKASRITNKSLYPTDHYF*LRTTGC
Trigger: ACACCCTGTGGTCCTTAGTCAAAAATAATGATCTGT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACACAGATCATTATTTTTaGCTAAGGACCACAGGGTGT +
Preference number: 2 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYTDHYF*LRTTGC
Trigger: ACACCCTGTGGTCCTTAGTCAAAAATAATGATCTGT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 72 bp ACCACTAGCTGCTCTACACAGACCGGCTACTGTAGCTaGGGTTTCACTGACACTTTCCCTGGAGAGGTGCCA +
Preference number: 3 (lower is better)
Translates to: TTSCSTQTGYCS*GFTDTFPGEVP
Trigger: TGGCACCTCTCCAGGGAAAGTGTCAGTGAAACCTCAGCTACAGTAGCCGGTCTGTGTAGAGCAGCTAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CAA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCGGAAGCGCTCTAACATaGAGGTACCTGCAGGTCTTG +
Preference number: 3 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCGSALT*RYLQVL
Trigger: CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCC...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR GCA 72 bp CACTTTACCCTCAACCATTCAAGGTCTCTAAGAGCATaGACATGGATACATGACGGGGAAAGGCAGCAACTC +
Preference number: 3 (lower is better)
Translates to: HFTLNHSRSLRA*TWIHDGERQQL
Trigger: GAGTTGCTGCCTTTCCCCGTCATGTATCCATGTGCATGCTCTTAGAGACCTTGAATGGTTGAGGGTAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 72 bp CCATTCAAGGTCTCTAAGAGCATGCACATGGATACATaGCGGGGAAAGGCAGCAACTCAGCATAAACACTTT +
Preference number: 3 (lower is better)
Translates to: PFKVSKSMHMDT*RGKAATQHKHF
Trigger: AAAGTGTTTATGCTGAGTTGCTGCCTTTCCCCGTCATGTATCCATGTGCATGCTCTTAGAGACCTTGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR CCA 72 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTaGAGAAGCTTTACATGCCAGCAATTCCAGAATGTC +
Preference number: 3 (lower is better)
Translates to: QIVKSDFPGVPL*RSFTCQQFQNV
Trigger: GACATTCTGGAATTGCTGGCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CAA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCCTAAAGGGCTCTCATTaGCCTAAGACTGACAATACA +
Preference number: 3 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCLKGSH*PKTDNT
Trigger: TGTATTGTCAGTCTTAGGCAAATGAGAGCCCTTTAG...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CAA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCATCATGCTAAGCCCATaGACTTTGGAAAATTCTGCA +
Preference number: 3 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCIMLSP*TLENSA
Trigger: TGCAGAATTTTCCAAAGTCAATGGGCTTAGCATGAT...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGGAAGCGCTCTAACATaGAGGTACCTGCAGGTCTTG +
Preference number: 3 (lower is better)
Translates to: FSSDIHKASRITNKSLYPGSALT*RYLQVL
Trigger: CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 72 bp AAACAGTCTGCACTATTTCATATACTTACGTGCATGTaGAAATGGGGAGGTAACACCACTAGCTGCTCTACA +
Preference number: 3 (lower is better)
Translates to: KQSALFHILTCM*KWGGNTTSCST
Trigger: TGTAGAGCAGCTAGTGGTGTTACCTCCCCATTTTCACATGCACGTAAGTATATGAAATAGTGCAGACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 72 bp ACTGTCTCTCTAGAAAGCAACCAGCTTAGTGAGAAATaGCTACTCAAAATACAAACTCACTACTCCCTGACT +
Preference number: 3 (lower is better)
Translates to: TVSLESNQLSEK*LLKIQTHYSLT
Trigger: AGTCAGGGAGTAGTGAGTTTGTATTTTGAGTAGTCATTTCTCACTAAGCTGGTTGCTTTCTAGAGAGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACAGGTACCTGCAGGTCTaGGCAATTCAGCATTTTAGA +
Preference number: 3 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYRYLQV*AIQHFR
Trigger: TCTAAAATGCTGAATTGCCAAGACCTGCAGGTACCT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGTAGGTCCATGTGTTTaGATCCTTTTACAGGCCCTT +
Preference number: 3 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYVGPCV*ILLQAL
Trigger: AAGGGCCTGTAAAAGGATCAAAACACATGGACCTAC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGTAGGTCCATGTGTTTaGATCCTTTTACAGGCCCTT +
Preference number: 3 (lower is better)
Translates to: FSSDIHKASRITNKSLYPVGPCV*ILLQAL
Trigger: AAGGGCCTGTAAAAGGATCAAAACACATGGACCTAC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTCTTCCCCATCCTTTTaGTCACAGGGTATGAAGTCT +
Preference number: 3 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYSSPSF*SQGMKS
Trigger: AGACTTCATACCCTGTGACAAAAAGGATGGGGAAGA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 72 bp AGAAATGACTACTCAAAATACAAACTCACTACTCCCTaGCTTGAGGAAGAACTAAAGCTTCTCCTAAGGGTA +
Preference number: 3 (lower is better)
Translates to: RNDYSKYKLTTP*LEEELKLLLRV
Trigger: TACCCTTAGGAGAAGCTTTAGTTCTTCCTCAAGTCAGGGAGTAGTGAGTTTGTATTTTGAGTAGTCATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 72 bp ATTTGCCTAAGACTGACAATACAAAGAAAGGCTTATTaGAAGACACTTCCCTTTGAAAATAACCCCACTCAG +
Preference number: 3 (lower is better)
Translates to: ICLRLTIQRKAY*KTLPFENNPTQ
Trigger: CTGAGTGGGGTTATTTTCAAAGGGAAGTGTCTTTCAATAAGCCTTTCTTTGTATTGTCAGTCTTAGGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACATCATGCTAAGCCCATaGACTTTGGAAAATTCTGCA +
Preference number: 3 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYIMLSP*TLENSA
Trigger: TGCAGAATTTTCCAAAGTCAATGGGCTTAGCATGAT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACCTAAGCCCATTGACTTaGGAAAATTCTGCAAGTTAT +
Preference number: 3 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYLSPLT*ENSASY
Trigger: ATAACTTGCAGAATTTTCCAAAGTCAATGGGCTTAG...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 72 bp GGACCTTATTTTAAACATTTAGGATTCCACACCATTTaGAACAGTCTGCACTATTTCATATACTTACGTGCA +
Preference number: 3 (lower is better)
Translates to: GPYFKHLGFHTI*NSLHYFIYLRA
Trigger: TGCACGTAAGTATATGAAATAGTGCAGACTGTTTCAAATGGTGTGGAATCCTAAATGTTTAAAATAAGGTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR TCA 72 bp TTACAAGTCTTCAGCCCATTTAGTCATCTAAGAAGTTaGGAAAGTCTAAACCTAAGTAATCACAGCAAATAC +
Preference number: 3 (lower is better)
Translates to: LQVFSPFSHLRS*ESLNLSNHSKY
Trigger: GTATTTGCTGTGATTACTTAGGTTTAGACTTTCTCAACTTCTTAGATGACTAAATGGGCTGAAGACTTGTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCTGCGGCAGGGGAGCTaGAGGCGGAGGCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLLRQGS*RRRRAA
Trigger: AGCTGCGCGCCTCCGCCTCCAGCTCCCCTGCCGCAG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360816.8
CDS-3UTR CCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCAGAGCACTGAGGGCCTaGCCTGAGCCGCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCRALRA*PEPRPQ
Trigger: CTGTGGGCGCGGCTCAGGCCAGGCCCTCAGTGCTCT...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358293.7
CDS-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTACTGAGGGCCTGGCCTaGGCCGCGCCCACAGCGTCC +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPTEGLA*AAPTAS
Trigger: GGACGCTGTGGGCGCGGCTCAGGCCAGGCCCTCAGT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358293.7
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCGAAGCCCCTTCCTGGTaGGGTAGTGGCTTGGACAGA +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCEAPSW*GSGLDR
Trigger: TCTGTCCAAGCCACTACCTCACCAGGAAGGGGCTTC...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGGAACTGTTTCGCGACTaGAGCGGACACGTGACGAGG +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLELFRD*SGHVTR
Trigger: CCTCGTCACGTGTCCGCTGCAGTCGCGAAACAGTTC...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360816.8
CDS-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACCCACAGCGTCCCCCTTaGCTCAGGCCTCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYPQRPP*LRPRAT
Trigger: GGTCGCCCGAGGCCTGAGCCAAGGGGGACGCTGTGG...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358293.7
CDS-3UTR CCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCCCTGGGGTGCCTCTCTaGAGAAGCTTTACATGCCAG +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCPGVPL*RSFTCQ
Trigger: CTGGCATGTAAAGCTTCTCCAGAGAGGCACCCCAGG...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCAAACAGTTTATTCCCTaGGGCCCCCTGACACCTGGA +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCKQFIP*GPLTPG
Trigger: TCCAGGTGTCAGGGGGCCTCAGGGAATAAACTGTTT...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCCTGGGGTGCCTCTCTaGAGAAGCTTTACATGCCAG +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLPGVPL*RSFTCQ
Trigger: CTGGCATGTAAAGCTTCTCCAGAGAGGCACCCCAGG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCACCGGCTACTGTAGCTaGGGTTTCACTGACACTTTC +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCTGYCS*GFTDTF
Trigger: GAAAGTGTCAGTGAAACCTCAGCTACAGTAGCCGGT...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCCGAGTGGATTCCTTTTaGGTCTTGCTTCCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCRVDSF*VLLPGK
Trigger: TTTCCCCGGAAGCAAGACGCAAAAGGAATCCACTCG...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGGGTAACACCACTAGCTaGTCTACACAGACCGGCTAC +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLGNTTS*STQTGY
Trigger: GTAGCCGGTCTGTGTAGAGCAGCTAGTGGTGTTACC...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCGTGATTTCCCTGGGGTaGCTCTCTGGAGAAGCTTTA +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCVISLG*LSGEAL
Trigger: TAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCAC...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCACACCTGGAACCGAGTaGATTCCTTTTGCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCTPGTE*IPFASC
Trigger: GCAAGACGCAAAAGGAATCCACTCGGTTCCAGGTGT...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGTCACAGCTGCCTGTTTaGGAACTCGAATGTGACCGC +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLSQLPV*ELECDR
Trigger: GCGGTCACATTCGAGTTCCCAAACAGGCAGCTGTGA...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCTCTCACTCGATACAGTaGCATGACCACAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCSHSIQ*HDHSSL
Trigger: CAGAGAGCTGTGGTCATGCCACTGTATCGAGTGAGA...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTTCCCTGAGGCCCCCTaGCACCTGGAACCGAGTGGA +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYFPEAP*HLEPSG
Trigger: TCCACTCGGTTCCAGGTGTCAGGGGGCCTCAGGGAA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGTTGGGAACTCGAATGTaGCCGCTGGTTTCCACCTTA +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLLGTRM*PLVSTL
Trigger: TAAGGTGGAAACCAGCGGTCACATTCGAGTTCCCAA...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGGAGAGTTGGGAAGCCTaGAGACCAGATAAGCGAGTT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLESWEA*RPDKRV
Trigger: AACTCGCTTATCTGGTCTTCAGGCTTCCCAACTCTC...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGGACAGATCCCAGCGCTaGAGCTTCGTACTCTTACTT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLDRSQR*SFVLLL
Trigger: AAGTAAGAGTACGAAGCTGCAGCGCTGGGATCTGTC...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCTCTTGCTCAATCTGCTaGAAGATGATGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCSCSIC*KMMTAG
Trigger: CCCAGCTGTCATCATCTTCCAGCAGATTGAGCAAGA...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGTTTTCTTCAGTAGGCTaGGTGACAGCTGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLFSSVG*VTAVRL
Trigger: CAGCCTCACAGCTGTCACCCAGCCTACTGAAGAAAA...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGTCACACTGTACAGTCTaGACTTGCAGCCACTCAAGC +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLSHCTV*TCSHSS
Trigger: GCTTGAGTGGCTGCAAGTCCAGACTGTACAGTGTGA...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGTCTCACTCGATACAGTaGCATGACCACAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLSHSIQ*HDHSSL
Trigger: CAGAGAGCTGTGGTCATGCCACTGTATCGAGTGAGA...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCTCATCATCTCGGGTTTaGTGGACTGTCTTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCSSSRV*WTVFPV
Trigger: TACAGGAAAGACAGTCCATCAAACCCGAGATGATGA...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGACAACTCCCCAGAAATaGGAGGCACTTCTCGGAAAT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLTTPQK*EALLGN
Trigger: ATTTCCGAGAAGTGCCTCTCATTTCTGGGGAGTTGT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGATGACCACAGCTCTCTaGCTTTCCCTTTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLMTTAL*LSLFPR
Trigger: CCTAGGAAAAAGGGAAAGGCAGAGAGCTGTGGTCAT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGGGGGAGAAGGAGGAATaGGAATTCTTTCCGAATCAG +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLGEKEE*EFFPNQ
Trigger: CTGATTCGGAAAGAATTCCCATTCCTCCTTCTCCCC...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCCTTTCTCCAGTAGGATaGTGTGAGAGGGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCLSPVG*CERERM
Trigger: CATTCTTTCCCTCTCACACCATCCTACTGGAGAAAG...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCTGCAGCCACTCAAGCTaGATAAGTCTATCGATATAC +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCCSHSS*ISLSIY
Trigger: GTATATCGATAGACTTATTCAGCTTGAGTGGCTGCA...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCACTACTCCCTGACTTaGGGAAGAACTAAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLHYSLT*GRTKAS
Trigger: AGAAGCTTTAGTTCTTCCTCAAGTCAGGGAGTAGTG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCAAACTCACTACTCCCTaGCTTGAGGAAGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCKLTTP*LEEELK
Trigger: CTTTAGTTCTTCCTCAAGTCAGGGAGTAGTGAGTTT...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGACAAATTGTAAAGAGTaGTTTCCCTGGGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLTNCKE*FPWGAS
Trigger: AGAGGCACCCCAGGGAAATCACTCTTTACAATTTGT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCTACACTGCGCAAATATaGACAGAAAACTCACAGCAC +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCYTAQI*TENSQH
Trigger: GTGCTGTGAGTTTTCTGTTCATATTTGCGCAGTGTA...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGTCCAGTAGGATGGTGTaGGAGGGAAAGAATGTAAGA +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLSSRMV*EGKNVR
Trigger: TCTTACATTCTTTCCCTCTCACACCATCCTACTGGA...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCTGGAGAAGCTTTACATaGCAGCAATTCCAGAATGTC +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCWRSFT*QQFQNV
Trigger: GACATTCTGGAATTGCTGGCATGTAAAGCTTCTCCA...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACAGGCTGCTTCTCGGCTaGGAAGAAGCGTGGGGTACT +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYRLLLG*EEAWGT
Trigger: AGTACCCCACGCTTCTTCCCAGCCGAGAAGCAGCCT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCATGTGCTTGTGTTTTaGAGGCCTTACAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLHVLVF*RPYRNL
Trigger: CAGATTCCTGTAAGGCCTCCAAAACACAAGCACATG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCTGGATTTCTTCATGGTaGAAAGCTTTCTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCWISSW*KAFFRE
Trigger: TTCCCGAAAGAAAGCTTTTCACCATGAAGAAATCCA...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCACAGATCATTATTTTTaGCTAAGGACCACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCTDHYF*LRTTGC
Trigger: ACACCCTGTGGTCCTTAGTCAAAAATAATGATCTGT...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGAATATCTATGGGCCATaGAACTTCATAGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLNIYGP*NFIESC
Trigger: GCAGCTCTCTATGAAGTTTCATGGCCCATAGATATT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGATATGGCAAGACCAATaGTATTCTCTTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLIWQDQ*YSLPHP
Trigger: AGGATGGGGAAGAGAATATCATTGGTCTTGCCATAT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCTATTCTTGCTCAATCTaGTGGAAGATGATGACAGCT +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCYSCSI*WKMMTA
Trigger: AGCTGTCATCATCTTCCAGCAGATTGAGCAAGAATA...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGATCAGAGAGATCACTTaGACTGTCCTCATCAGCATT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLIREIT*TVLISI
Trigger: AATGCTGATGAGGACAGTGCAAGTGATCTCTCTGAT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCCTTTTTCCTAGGATGTaGATGTGCTTGTGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCLFPRM*MCLCFG
Trigger: TCCAAAACACAAGCACATGCACATCCTAGGAAAAAG...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTAGGCCCCCTGACACCTaGAACCGAGTGGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPRPPDT*NRVDSF
Trigger: AAAGGAATCCACTCGGTTCCAGGTGTCAGGGGGCCT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACAGGCCCCCTGACACCTaGAACCGAGTGGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYRPPDT*NRVDSF
Trigger: AAAGGAATCCACTCGGTTCCAGGTGTCAGGGGGCCT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGTCTGAGAACAAAACCTaGTACCACCAAGCACATCAA +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLSENKT*YHQAHQ
Trigger: TTGATGTGCTTGGTGGTACCAGGTTTTGTTCTCAGA...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTAAACAGTTTATTCCCTaGGGCCCCCTGACACCTGGA +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPKQFIP*GPLTPG
Trigger: TCCAGGTGTCAGGGGGCCTCAGGGAATAAACTGTTT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCTCAAATGCATAATGTaGTGGGTGGATTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLLKCIM*WVDFFM
Trigger: CATGAAGAAATCCACCCATCACATTATGCATTTGAG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGACAGATCATTATTTTTaGCTAAGGACCACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLTDHYF*LRTTGC
Trigger: ACACCCTGTGGTCCTTAGTCAAAAATAATGATCTGT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCAACACTCAGTGCTTTTaGCTTGATGAATTGAATGAG +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCNTQCF*LDELNE
Trigger: CTCATTCAATTCATCAAGTCAAAAGCACTGAGTGTT...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCTTTTGTCACAGGGTATaGAGTCTATCCTATTCAAGT +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCFCHRV*SLSYSS
Trigger: ACTTGAATAGGATAGACTTCATACCCTGTGACAAAA...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCTTTTTCCTAGGATGTaGATGTGCTTGTGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLLFPRM*MCLCFG
Trigger: TCCAAAACACAAGCACATGCACATCCTAGGAAAAAG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCACTTTATTCCAAGATaGGCCAGCATTCATATTGCT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLHFIPR*ASIHIA
Trigger: AGCAATATGAATGCTGGCCCATCTTGGAATAAAGTG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGGCTGGGAAGAAGCGTaGGGTACTTGGGATTTACTC +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYGWEEA*GTWDLL
Trigger: GAGTAAATCCCAAGTACCCCACGCTTCTTCCCAGCC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGGCTGGGAAGAAGCGTaGGGTACTTGGGATTTACTC +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPGWEEA*GTWDLL
Trigger: GAGTAAATCCCAAGTACCCCACGCTTCTTCCCAGCC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTTGGGAACTCGAATGTaGCCGCTGGTTTCCACCTTA +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYLGTRM*PLVSTL
Trigger: TAAGGTGGAAACCAGCGGTCACATTCGAGTTCCCAA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCCTGCTCTTGCAAACTaGAACAGATCATTATTTTTG +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLPALAN*NRSLFL
Trigger: CAAAAATAATGATCTGTTTCAGTTTGCAAGAGCAGG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACATGCACATGGATACATaGCGGGGAAAGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYMHMDT*RGKAAT
Trigger: AGTTGCTGCCTTTCCCCGTCATGTATCCATGTGCAT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGTGCTCAAAATATTCTTaGTCAATCTGCTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLCSKYS*SICWKM
Trigger: CATCTTCCAGCAGATTGAGCAAGAATATTTTGAGCA...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGACTTGGGATTTACTCTaGCTTTTTCCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLTWDLL*LFPEEF
Trigger: GAATTCTTCAGGAAAAAGGCAGAGTAAATCCCAAGT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGACAGATCCCAGCGCTaGAGCTTCGTACTCTTACTT +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYDRSQR*SFVLLL
Trigger: AAGTAAGAGTACGAAGCTGCAGCGCTGGGATCTGTC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGTGATTTCCCTGGGGTaGCTCTCTGGAGAAGCTTTA +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYVISLG*LSGEAL
Trigger: TAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCAC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTTTTCTTCAGTAGGCTaGGTGACAGCTGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYFSSVG*VTAVRL
Trigger: CAGCCTCACAGCTGTCACCCAGCCTACTGAAGAAAA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTACACCTGGAACCGAGTaGATTCCTTTTGCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPTPGTE*IPFASC
Trigger: GCAAGACGCAAAAGGAATCCACTCGGTTCCAGGTGT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTTCGAAGATTGAGATCTaGAGGTGTGAGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPSKIEI*RCEGRR
Trigger: CCTTCTCCCCTCACACCTCCAGATCTCAATCTTCGA...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCGCTTTTGAATATCTATaGGCCATGAAACTTCATAGA +
Preference number: 4 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCAFEYL*AMKLHR
Trigger: TCTATGAAGTTTCATGGCCCATAGATATTCAAAAGC...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTACAACTCCCCAGAAATaGGAGGCACTTCTCGGAAAT +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPTTPQK*EALLGN
Trigger: ATTTCCGAGAAGTGCCTCTCATTTCTGGGGAGTTGT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCAGCATTCATATTGCTaGTTTTCTGATGAGATTCAT +
Preference number: 4 (lower is better)
Translates to: HSILTFGSALTLRYLQVLQHSYC*FSDEIH
Trigger: ATGAATCTCATCAGAAAAGCAGCAATATGAATGCTG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGTCCAGAATCACAGCTaGCTGTTTGGGAACTCGAAT +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPVQNHS*LFGNSN
Trigger: ATTCGAGTTCCCAAACAGGCAGCTGTGATTCTGGAC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTATGACCACAGCTCTCTaGCTTTCCCTTTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPMTTAL*LSLFPR
Trigger: CCTAGGAAAAAGGGAAAGGCAGAGAGCTGTGGTCAT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTAGGTCTCTAAGAGCATaGACATGGATACATGACGGG +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPRSLRA*TWIHDG
Trigger: CCCGTCATGTATCCATGTGCATGCTCTTAGAGACCT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTTCTTGCTCAATCTGCTaGAAGATGATGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPSCSIC*KMMTAG
Trigger: CCCAGCTGTCATCATCTTCCAGCAGATTGAGCAAGA...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGGGGAGAAGGAGGAATaGGAATTCTTTCCGAATCAG +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYGEKEE*EFFPNQ
Trigger: CTGATTCGGAAAGAATTCCCATTCCTCCTTCTCCCC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR CAA 72 bp ATTCACAGTATTTTGACTTTTGGAAGCGCTCTAACATaGAGGTACCTGCAGGTCTTGGCAATTCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: IHSILTFGSALT*RYLQVLAIQHF
Trigger: AAAATGCTGAATTGCCAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTCATCATCTCGGGTTTaGTGGACTGTCTTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYSSSRV*WTVFPV
Trigger: TACAGGAAAGACAGTCCATCAAACCCGAGATGATGA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACATACTTACGTGCATGTaGAAATGGGGAGGTAACACC +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYILTCM*KWGGNT
Trigger: GGTGTTACCTCCCCATTTTCACATGCACGTAAGTAT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACACAAATTGTAAAGAGTaGTTTCCCTGGGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYTNCKE*FPWGAS
Trigger: AGAGGCACCCCAGGGAAATCACTCTTTACAATTTGT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTCCAGTAGGATGGTGTaGGAGGGAAAGAATGTAAGA +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYSSRMV*EGKNVR
Trigger: TCTTACATTCTTTCCCTCTCACACCATCCTACTGGA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGAAGCGTGGGGTACTTaGGATTTACTCTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPEAWGT*DLLCLF
Trigger: AAAAAGGCAGAGTAAATCCCAAGTACCCCACGCTTC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTCATGTGCTTGTGTTTTaGAGGCCTTACAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPHVLVF*RPYRNL
Trigger: CAGATTCCTGTAAGGCCTCCAAAACACAAGCACATG...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR CAA 72 bp ATGGCAAGACCAATGATATTCTCTTCCCCATCCTTTTaGTCACAGGGTATGAAGTCTATCCTATTCAAGTTA +
Preference number: 4 (lower is better)
Translates to: MARPMIFSSPSF*SQGMKSILFKL
Trigger: TAACTTGAATAGGATAGACTTCATACCCTGTGACAAAAAGGATGGGGAAGAGAATATCATTGGTCTTGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACCCCTATTCCTCTTCTTaGAAAAATCACGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYPYSSS*KNHVAD
Trigger: ATCAGCCACGTGATTTTTTCAAGAAGAGGAATAGGG...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTGCAGCCACTCAAGCTaGATAAGTCTATCGATATAC +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYCSHSS*ISLSIY
Trigger: GTATATCGATAGACTTATTCAGCTTGAGTGGCTGCA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGGATTCCACACCATTTaGAACAGTCTGCACTATTTC +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPGFHTI*NSLHYF
Trigger: GAAATAGTGCAGACTGTTTCAAATGGTGTGGAATCC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACAAACTCACTACTCCCTaGCTTGAGGAAGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYKLTTP*LEEELK
Trigger: CTTTAGTTCTTCCTCAAGTCAGGGAGTAGTGAGTTT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTAATATCTATGGGCCATaGAACTTCATAGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPNIYGP*NFIESC
Trigger: GCAGCTCTCTATGAAGTTTCATGGCCCATAGATATT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGTGAGCATAAAGGAATaGGGAAGTAGACGATATCCA +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPVSIKE*GSRRYP
Trigger: TGGATATCGTCTACTTCCTCATTCCTTTATGCTCAC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTCAGCATTCATCTTTTaGGAGTCCAGTTACAAGGTG +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYSAFIF*ESSYKV
Trigger: CACCTTGTAACTGGACTCCCAAAAGATGAATGCTGA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358293.7
CDS-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGGTACCTGCAGGTCTTaGCAATTCAGCATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYGTCRS*QFSILD
Trigger: ATCTAAAATGCTGAATTGCCAAGACCTGCAGGTACC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGGTACCTGCAGGTCTTaGCAATTCAGCATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPGTCRS*QFSILD
Trigger: ATCTAAAATGCTGAATTGCCAAGACCTGCAGGTACC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTTGGATTTCTTCATGGTaGAAAGCTTTCTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPWISSW*KAFFRE
Trigger: TTCCCGAAAGAAAGCTTTTCACCATGAAGAAATCCA...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTCTCAAATGCATAATGTaGTGGGTGGATTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPLKCIM*WVDFFM
Trigger: CATGAAGAAATCCACCCATCACATTATGCATTTGAG...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTTATTCTTGCTCAATCTaGTGGAAGATGATGACAGCT +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPYSCSI*WKMMTA
Trigger: AGCTGTCATCATCTTCCAGCAGATTGAGCAAGAATA...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGGCCAGCATTCATATTaGTGCTTTTCTGATGAGATT +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYGQHSY*CFSDEI
Trigger: AATCTCATCAGAAAAGCAGCAATATGAATGCTGGCC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGGCCAGCATTCATATTaGTGCTTTTCTGATGAGATT +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPGQHSY*CFSDEI
Trigger: AATCTCATCAGAAAAGCAGCAATATGAATGCTGGCC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTATTCCTCTTATATTTaGAAAGGTCTCCTCACCACC +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYYSSYI*KGLLTT
Trigger: GGTGGTGAGGAGACCTTTCCAAATATAAGAGGAATA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTTATTCCTCTTATATTTaGAAAGGTCTCCTCACCACC +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPYSSYI*KGLLTT
Trigger: GGTGGTGAGGAGACCTTTCCAAATATAAGAGGAATA...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTCACTTTATTCCAAGATaGGCCAGCATTCATATTGCT +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPHFIPR*ASIHIA
Trigger: AGCAATATGAATGCTGGCCCATCTTGGAATAAAGTG...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACAACACTCAGTGCTTTTaGCTTGATGAATTGAATGAG +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYNTQCF*LDELNE
Trigger: CTCATTCAATTCATCAAGTCAAAAGCACTGAGTGTT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTTTTGTCACAGGGTATaGAGTCTATCCTATTCAAGT +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYFCHRV*SLSYSS
Trigger: ACTTGAATAGGATAGACTTCATACCCTGTGACAAAA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTATTTTCAAGCCATTTTaGATGGTGTCCTGTACATGT +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPIFKPF*MVSCTC
Trigger: ACATGTACAGGACACCATTCAAAATGGCTTGAAAAT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR TCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACATTTTCAAGCCATTTTaGATGGTGTCCTGTACATGT +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYIFKPF*MVSCTC
Trigger: ACATGTACAGGACACCATTCAAAATGGCTTGAAAAT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACACTTGGGATTTACTCTaGCTTTTTCCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYTWDLL*LFPEEF
Trigger: GAATTCTTCAGGAAAAAGGCAGAGTAAATCCCAAGT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR CAA 72 bp TTTGTAACTATTACACTGAATGTAGGTCCATGTGTTTaGATCCTTTTACAGGCCCTTCCTTTACAAATTGTA +
Preference number: 4 (lower is better)
Translates to: FVTITLNVGPCV*ILLQALPLQIV
Trigger: TACAATTTGTAAAGGAAGGGCCTGTAAAAGGATCAAAACACATGGACCTACATTCAGTGTAATAGTTACAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
3UTR CAA 72 bp TTATTCACTAGGAGCTATGATCTAGTCGTGACAATATaGGTTAAAATAGTCAATCTGAGGCAGAAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: LFTRSYDLVVTI*VKIVNLRQKVN
Trigger: GTTTACTTTCTGCCTCAGATTGACTATTTTAACCAATATTGTCACGACTAGATCATAGCTCCTAGTGAATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTCAGCATTCATATTGCTaGTTTTCTGATGAGATTCAT +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPQHSYC*FSDEIH
Trigger: ATGAATCTCATCAGAAAAGCAGCAATATGAATGCTG...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTCTATTCCCCAGATTATaGAACCAGCTTCAATTTAAA +
Preference number: 4 (lower is better)
Translates to: FSSDIHKASRITNKSLYPLFPRL*NQLQFK
Trigger: TTTAAATTGAAGCTGGTTGCATAATCTGGGGAATAG...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR GCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACCTATTCCCCAGATTATaGAACCAGCTTCAATTTAAA +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYLFPRL*NQLQFK
Trigger: TTTAAATTGAAGCTGGTTGCATAATCTGGGGAATAG...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CCA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGCTTTTGAATATCTATaGGCCATGAAACTTCATAGA +
Preference number: 4 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYAFEYL*AMKLHR
Trigger: TCTATGAAGTTTCATGGCCCATAGATATTCAAAAGC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS TCA 90 bp AGGTCTCCTCACCACCGGAACTGTTTCGCGACTGCAGCGGACACGTaGCGAGGCTGCCAGCCTTCCTTCCTCTCCGGCGCCCGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: RSPHHRNCFATAADT*RGCQPSFLSGARAG
Trigger: CCCCGCGCGGGCGCCGGAGAGGAAGGAAGGCTGGCAGCCTCGTCACGTGTCCGCTGCAGTCGCGAAACAGTTCCGGTGGTGAGGAGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360816.8
ENST00000469084.5
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCCCACAGCGTCCCCCTaGGCTCAGGCCTCGGGCGAC +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLPTASP*AQASGD
Trigger: GTCGCCCGAGGCCTGAGCCAAGGGGGACGCTGTGGG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358293.7
CDS TCA 90 bp TCTGCTGAGTCCAGAATCACAGCTGCCTGTTTGGGAACTCGAATGTaGCCGCTGGTTTCCACCTTAGAGCTGCTTCCACTGCCGGACAGA +
Preference number: 5 (lower is better)
Translates to: SAESRITAACLGTRM*PLVSTLELLPLPDR
Trigger: TCTGTCCGGCAGTGGAAGCAGCTCTAAGGTGGAAACCAGCGGTCACATTCGAGTTCCCAAACAGGCAGCTGTGATTCTGGACTCAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000469084.5
CDS CCA 90 bp GGCTGGGTGACAGCTGTGAGGCTGCTTCTCGGCTGGGAAGAAGCGTaGGGTACTTGGGATTTACTCTGCCTTTTTCCTGAAGAATTCTTT +
Preference number: 5 (lower is better)
Translates to: GWVTAVRLLLGWEEA*GTWDLLCLFPEEFF
Trigger: AAAGAATTCTTCAGGAAAAAGGCAGAGTAAATCCCAAGTACCCCACGCTTCTTCCCAGCCGAGAAGCAGCCTCACAGCTGTCACCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000421092.1
CDS CCA 90 bp CTTGCTTCCGGGGAAATGCTTTCTTTAAGTTTTTCTTCAGTAGGCTaGGTGACAGCTGTGAGGCTGCTTCTCGGCTGGGAAGAAGCGTGG +
Preference number: 5 (lower is better)
Translates to: LASGEMLSLSFSSVG*VTAVRLLLGWEEAW
Trigger: CCACGCTTCTTCCCAGCCGAGAAGCAGCCTCACAGCTGTCACCCAGCCTACTGAAGAAAAACTTAAAGAAAGCATTTCCCCGGAAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCGGGAAGGGCCTGACTTaGAAGCCCCTTCCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCGKGLT*KPLPGE
Trigger: CTCACCAGGAAGGGGCTTCAAAGTCAGGCCCTTCCC...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS TCA 90 bp AAAGCTTTCTTTCGGGAAGGGCCTGACTTTGAAGCCCCTTCCTGGTaGGGTAGTGGCTTGGACAGAGCACTAGCAATTAGCTTACTTCTC +
Preference number: 5 (lower is better)
Translates to: KAFFREGPDFEAPSW*GSGLDRALAISLLL
Trigger: GAGAAGTAAGCTAATTGCTAGTGCTCTGTCCAAGCCACTACCTCACCAGGAAGGGGCTTCAAAGTCAGGCCCTTCCCGAAAGAAAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000469084.5
CDS-3UTR CAA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCCCGAGTGGATTCCTTTaGCGTCTTGCTTCCGGGGAA +
Preference number: 5 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCPSGFL*RLASGE
Trigger: TTCCCCGGAAGCAAGACGCAAAAGGAATCCACTCGG...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS CCA 90 bp ACAGCTGTGAGGCTGCTTCTCGGCTGGGAAGAAGCGTGGGGTACTTaGGATTTACTCTGCCTTTTTCCTGAAGAATTCTTTGAATGTTGC +
Preference number: 5 (lower is better)
Translates to: TAVRLLLGWEEAWGT*DLLCLFPEEFFECC
Trigger: GCAACATTCAAAGAATTCTTCAGGAAAAAGGCAGAGTAAATCCCAAGTACCCCACGCTTCTTCCCAGCCGAGAAGCAGCCTCACAGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000421092.1
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGGGAAGCGCTCTAACATaGAGGTACCTGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLGSALT*RYLQVL
Trigger: CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCC...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGTCTTCAGCTCGAAGATaGAGATCTGGAGGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLSSARR*RSGGVR
Trigger: CCTCACACCTCCAGATCTCAATCTTCGAGCTGAAGA...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGCTGTACAGTCTGGACTaGCAGCCACTCAAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLLYSLD*QPLKLN
Trigger: ATTCAGCTTGAGTGGCTGCAAGTCCAGACTGTACAG...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS TCA 90 bp TTTGCTTTTTCACACTGTACAGTCTGGACTTGCAGCCACTCAAGCTaGATAAGTCTATCGATATACTTCCCAAGAAGTCCTCCCACTCGG +
Preference number: 5 (lower is better)
Translates to: FAFSHCTVWTCSHSS*ISLSIYFPRSPPTR
Trigger: CCGAGTGGGAGGACTTCTTGGGAAGTATATCGATAGACTTATTCAGCTTGAGTGGCTGCAAGTCCAGACTGTACAGTGTGAAAAAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000469084.5
CDS-3UTR CAA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCGTCAGCATTCATCTTTaGGGAGTCCAGTTACAAGGT +
Preference number: 5 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCVSIHL*GVQLQG
Trigger: ACCTTGTAACTGGACTCCCAAAAGATGAATGCTGAC...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358293.7
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGGATTCCTTTTGCGTCTaGCTTCCGGGGAAATGCTTT +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLDSFCV*LPGKCF
Trigger: AAAGCATTTCCCCGGAAGCAAGACGCAAAAGGAATC...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCAATCAGAGAGATCACTaGCACTGTCCTCATCAGCAT +
Preference number: 5 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCNQRDH*HCPHQH
Trigger: ATGCTGATGAGGACAGTGCAAGTGATCTCTCTGATT...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGGGAAGGGCCTGACTTaGAAGCCCCTTCCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYGKGLT*KPLPGE
Trigger: CTCACCAGGAAGGGGCTTCAAAGTCAGGCCCTTCCC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCCCTCATTTCAAGGGTTaGCCTCTGAGAACAAAACCT +
Preference number: 5 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCPHFKG*PLRTKP
Trigger: AGGTTTTGTTCTCAGAGGCAAACCCTTGAAATGAGG...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGGCATGTGCTTGTGTTTaGGAGGCCTTACAGGAATCT +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLACACV*EALQES
Trigger: AGATTCCTGTAAGGCCTCCAAAACACAAGCACATGC...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGAGGATGTGCATGTGCTaGTGTTTTGGAGGCCTTACA +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLRMCMC*CFGGLT
Trigger: TGTAAGGCCTCCAAAACACAAGCACATGCACATCCT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGATCATCATCTCGGGTTaGATGGACTGTCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLIIISG*MDCLSC
Trigger: ACAGGAAAGACAGTCCATCAAACCCGAGATGATGAT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGAATCAGAGAGATCACTaGCACTGTCCTCATCAGCAT +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLNQRDH*HCPHQH
Trigger: ATGCTGATGAGGACAGTGCAAGTGATCTCTCTGATT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGAATAGTATTCAGGTTTaGTATGGCCCTGACCAGGGT +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLNSIQV*YGPDQG
Trigger: ACCCTGGTCAGGGCCATACAAAACCTGAATACTATT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGAGGTACCTGCAGGTCTaGGCAATTCAGCATTTTAGA +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLRYLQV*AIQHFR
Trigger: TCTAAAATGCTGAATTGCCAAGACCTGCAGGTACCT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGGTAGGTCCATGTGTTTaGATCCTTTTACAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLVGPCV*ILLQAL
Trigger: AAGGGCCTGTAAAAGGATCAAAACACATGGACCTAC...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CAAATTGTAAAGAGTGATTTCCCTGGGGTGCCTCTCTGGAGAAGCTTTACATGCTTATTCCTCTTATATTaGGAAAGGTCTCCTCACCAC +
Preference number: 5 (lower is better)
Translates to: QIVKSDFPGVPLWRSFTCLFLLY*ERSPHH
Trigger: GTGGTGAGGAGACCTTTCCAAATATAAGAGGAATAA...GCATGTAAAGCTTCTCCAGAGAGGCACCCCAGGGAAATCACTCTTTACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTCCGAGTGGATTCCTTTaGCGTCTTGCTTCCGGGGAA +
Preference number: 5 (lower is better)
Translates to: FSSDIHKASRITNKSLYPPSGFL*RLASGE
Trigger: TTCCCCGGAAGCAAGACGCAAAAGGAATCCACTCGG...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTGGCACGGCTTCCGTTTaGTTCTCTGCGTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: FSSDIHKASRITNKSLYPGTASV*FSAFRS
Trigger: GCTTCTGAACGCAGAGAACAAAACGGAAGCCGTGCC...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACGGCACGGCTTCCGTTTaGTTCTCTGCGTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYGTASV*FSAFRS
Trigger: GCTTCTGAACGCAGAGAACAAAACGGAAGCCGTGCC...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGATCATGCTAAGCCCATaGACTTTGGAAAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLIMLSP*TLENSA
Trigger: TGCAGAATTTTCCAAAGTCAATGGGCTTAGCATGAT...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTTCTTCAGCTCGAAGATaGAGATCTGGAGGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: FSSDIHKASRITNKSLYPSSARR*RSGGVR
Trigger: CCTCACACCTCCAGATCTCAATCTTCGAGCTGAAGA...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTCTGTACAGTCTGGACTaGCAGCCACTCAAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: FSSDIHKASRITNKSLYPLYSLD*QPLKLN
Trigger: ATTCAGCTTGAGTGGCTGCAAGTCCAGACTGTACAG...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp CACAGTATTTTGACTTTTGGAAGCGCTCTAACATTGAGGTACCTGCAGGTCTTGTATTTTCAAGCCATTTaGAATGGTGTCCTGTACATG +
Preference number: 5 (lower is better)
Translates to: HSILTFGSALTLRYLQVLYFQAI*NGVLYM
Trigger: CATGTACAGGACACCATTCAAAATGGCTTGAAAATA...CAAGACCTGCAGGTACCTCAATGTTAGAGCGCTTCCAAAAGTCAAAATACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACAGAAGCGTGGGGTACTaGGGATTTACTCTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYRSVGY*GFTLPF
Trigger: AAAAGGCAGAGTAAATCCCAAGTACCCCACGCTTCT...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS GCA 90 bp ACTTGGGATTTACTCTGCCTTTTTCCTGAAGAATTCTTTGAATGTTaGACTTTATTCCAAGATGGGCCAGCATTCATATTGCTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: TWDLLCLFPEEFFEC*TLFQDGPAFILLLF
Trigger: GAAAAGCAGCAATATGAATGCTGGCCCATCTTGGAATAAAGTGCAACATTCAAAGAATTCTTCAGGAAAAAGGCAGAGTAAATCCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000421092.1
CDS-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTATCATCATCTCGGGTTaGATGGACTGTCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: FSSDIHKASRITNKSLYPIIISG*MDCLSC
Trigger: ACAGGAAAGACAGTCCATCAAACCCGAGATGATGAT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTAATAGTATTCAGGTTTaGTATGGCCCTGACCAGGGT +
Preference number: 5 (lower is better)
Translates to: FSSDIHKASRITNKSLYPNSIQV*YGPDQG
Trigger: ACCCTGGTCAGGGCCATACAAAACCTGAATACTATT...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTCCTCATTTCAAGGGTTaGCCTCTGAGAACAAAACCT +
Preference number: 5 (lower is better)
Translates to: FSSDIHKASRITNKSLYPPHFKG*PLRTKP
Trigger: AGGTTTTGTTCTCAGAGGCAAACCCTTGAAATGAGG...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTTCTTCCCCATCCTTTTaGTCACAGGGTATGAAGTCT +
Preference number: 5 (lower is better)
Translates to: FSSDIHKASRITNKSLYPSSPSF*SQGMKS
Trigger: AGACTTCATACCCTGTGACAAAAAGGATGGGGAAGA...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACCTAAAGGGCTCTCATTaGCCTAAGACTGACAATACA +
Preference number: 5 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYLKGSH*PKTDNT
Trigger: TGTATTGTCAGTCTTAGGCAAATGAGAGCCCTTTAG...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACCACCACCGGAACTTTTaGATGATTAAGGTGACTATT +
Preference number: 5 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYHHRNF*MIKVTI
Trigger: AATAGTCACCTTAATCATCAAAAAGTTCCGGTGGTG...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358293.7
CDS-3UTR CAA 90 bp TTCAGCTCAGACATACACAAGGCAAGTAGAATTACTAATAAATCACTTTACCCTTTATTCCTCTTATATTaGGAAAGGTCTCCTCACCAC +
Preference number: 5 (lower is better)
Translates to: FSSDIHKASRITNKSLYPLFLLY*ERSPHH
Trigger: GTGGTGAGGAGACCTTTCCAAATATAAGAGGAATAA...AGGGTAAAGTGATTTATTAGTAATTCTACTTGCCTTGTGTATGTCTGAGCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS-3UTR CAA 90 bp GCAAATAACAAACATGCTGAATATTTTCAAGCCATTTTGAATGGTGTCCTGTACTATTTTCAAGCCATTTaGAATGGTGTCCTGTACATG +
Preference number: 5 (lower is better)
Translates to: ANNKHAEYFQAILNGVLYYFQAI*NGVLYM
Trigger: CATGTACAGGACACCATTCAAAATGGCTTGAAAATA...GTACAGGACACCATTCAAAATGGCTTGAAAATATTCAGCATGTTTGTTATTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS CCA 72 bp GTAGGCTGGGTGACAGCTGTGAGGCTGCTTCTCGGCTaGGAAGAAGCGTGGGGTACTTGGGATTTACTCTGC +
Preference number: 6 (lower is better)
Translates to: VGWVTAVRLLLG*EEAWGTWDLLC
Trigger: GCAGAGTAAATCCCAAGTACCCCACGCTTCTTCCCAGCCGAGAAGCAGCCTCACAGCTGTCACCCAGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000421092.1
CDS CAA 72 bp CCAAGAAGTCCTCCCACTCGGGGCACGGCTTCCGTTTaGTTCTCTGCGTTCAGAAGCAGGGCCATATCTCGT +
Preference number: 6 (lower is better)
Translates to: PRSPPTRGTASV*FSAFRSRAISR
Trigger: ACGAGATATGGCCCTGCTTCTGAACGCAGAGAACAAAACGGAAGCCGTGCCCCGAGTGGGAGGACTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000469084.5
CDS TCA 72 bp TTTCGGGAAGGGCCTGACTTTGAAGCCCCTTCCTGGTaGGGTAGTGGCTTGGACAGAGCACTAGCAATTAGC +
Preference number: 6 (lower is better)
Translates to: FREGPDFEAPSW*GSGLDRALAIS
Trigger: GCTAATTGCTAGTGCTCTGTCCAAGCCACTACCTCACCAGGAAGGGGCTTCAAAGTCAGGCCCTTCCCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000469084.5
CDS CCA 72 bp ACAGCTGTGAGGCTGCTTCTCGGCTGGGAAGAAGCGTaGGGTACTTGGGATTTACTCTGCCTTTTTCCTGAA +
Preference number: 6 (lower is better)
Translates to: TAVRLLLGWEEA*GTWDLLCLFPE
Trigger: TTCAGGAAAAAGGCAGAGTAAATCCCAAGTACCCCACGCTTCTTCCCAGCCGAGAAGCAGCCTCACAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000421092.1
CDS CAA 72 bp CATGGTGAAAAGCTTTCTTTCGGGAAGGGCCTGACTTaGAAGCCCCTTCCTGGTGAGGTAGTGGCTTGGACA +
Preference number: 6 (lower is better)
Translates to: HGEKLSFGKGLT*KPLPGEVVAWT
Trigger: TGTCCAAGCCACTACCTCACCAGGAAGGGGCTTCAAAGTCAGGCCCTTCCCGAAAGAAAGCTTTTCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000469084.5
CDS CCA 72 bp GGGGAAATGCTTTCTTTAAGTTTTTCTTCAGTAGGCTaGGTGACAGCTGTGAGGCTGCTTCTCGGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: GEMLSLSFSSVG*VTAVRLLLGWE
Trigger: TTCCCAGCCGAGAAGCAGCCTCACAGCTGTCACCCAGCCTACTGAAGAAAAACTTAAAGAAAGCATTTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS CAA 90 bp AAGATGATGACAGCTGGGGAGGTGACTTCTTTATTCCTCTTATATTaGGAAAGGTCTCCTCACCACCGGAACTGTTTCGCGACTGCAGCG +
Preference number: 6 (lower is better)
Translates to: KMMTAGEVTSLFLLY*ERSPHHRNCFATAA
Trigger: CGCTGCAGTCGCGAAACAGTTCCGGTGGTGAGGAGACCTTTCCAAATATAAGAGGAATAAAGAAGTCACCTCCCCAGCTGTCATCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360816.8
ENST00000469084.5
CDS GCA 72 bp TTTCTCACTCGATACAGTGGCATGACCACAGCTCTCTaGCTTTCCCTTTTTCCTAGGATGTGCATGTGCTTG +
Preference number: 6 (lower is better)
Translates to: FLTRYSGMTTAL*LSLFPRMCMCL
Trigger: CAAGCACATGCACATCCTAGGAAAAAGGGAAAGGCAGAGAGCTGTGGTCATGCCACTGTATCGAGTGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8
CDS CCA 72 bp AGGCTGCTTCTCGGCTGGGAAGAAGCGTGGGGTACTTaGGATTTACTCTGCCTTTTTCCTGAAGAATTCTTT +
Preference number: 6 (lower is better)
Translates to: RLLLGWEEAWGT*DLLCLFPEEFF
Trigger: AAAGAATTCTTCAGGAAAAAGGCAGAGTAAATCCCAAGTACCCCACGCTTCTTCCCAGCCGAGAAGCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000421092.1
CDS TCA 72 bp TCACACTGTACAGTCTGGACTTGCAGCCACTCAAGCTaGATAAGTCTATCGATATACTTCCCAAGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: SHCTVWTCSHSS*ISLSIYFPRSP
Trigger: AGGACTTCTTGGGAAGTATATCGATAGACTTATTCAGCTTGAGTGGCTGCAAGTCCAGACTGTACAGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000469084.5
CDS CAA 90 bp AAGATGATGACAGCTGGGGAGGTGACTTCTTTATTCCTCTTATATTaGGAAAGGTCTCCTCACCACCGGAACTTTTTGATGATTAAGGTG +
Preference number: 6 (lower is better)
Translates to: KMMTAGEVTSLFLLY*ERSPHHRNFLMIKV
Trigger: CACCTTAATCATCAAAAAGTTCCGGTGGTGAGGAGACCTTTCCAAATATAAGAGGAATAAAGAAGTCACCTCCCCAGCTGTCATCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358293.7
CDS CAA 90 bp CGTGGGGTACTTGGGATTTACTCTGCCTTTTTCCTGAAGAATTCTTaGAATGTTGCACTTTATTCCAAGATGGGCCAGCATTCATATTGC +
Preference number: 6 (lower is better)
Translates to: RGVLGIYSAFFLKNS*NVALYSKMGQHSYC
Trigger: GCAATATGAATGCTGGCCCATCTTGGAATAAAGTGCAACATTCAAAGAATTCTTCAGGAAAAAGGCAGAGTAAATCCCAAGTACCCCACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000421092.1
CDS TCA 72 bp ATCAATGGGTCTAGGGGAAGTCTCAAATGCATAATGTaGTGGGTGGATTTCTTCATGGTGAAAAGCTTTCTT +
Preference number: 6 (lower is better)
Translates to: INGSRGSLKCIM*WVDFFMVKSFL
Trigger: AAGAAAGCTTTTCACCATGAAGAAATCCACCCATCACATTATGCATTTGAGACTTCCCCTAGACCCATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358293.7
ENST00000360816.8
ENST00000469084.5
CDS GCA 72 bp ACTAGAAGCAACAGAATACTGTCAGTAACTATTGATTaGAAATGGTCCTACCACCAGTATCGGGTTGGTTTT +
Preference number: 6 (lower is better)
Translates to: TRSNRILSVTID*KWSYHQYRVGF
Trigger: AAAACCAACCCGATACTGGTGGTAGGACCATTTGCAATCAATAGTTACTGACAGTATTCTGTTGCTTCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421092.1
CDS GCA 72 bp AGGAATGGGAATTCTTTCCGAATCAGAGAGATCACTTaGACTGTCCTCATCAGCATTCTCTTTAATAATTTT +
Preference number: 6 (lower is better)
Translates to: RNGNSFRIREIT*TVLISILFNNF
Trigger: AAAATTATTAAAGAGAATGCTGATGAGGACAGTGCAAGTGATCTCTCTGATTCGGAAAGAATTCCCATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358293.7
ENST00000360816.8