RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM216B (Homo sapiens)

Ensembl gene IDs: ENSG00000179813

Ensembl transcript IDs: ENST00000313851.3, ENST00000537894.5

Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTAGTATAGGCCAAGTTAGGTCTCCCACCAACCTCTCTGCTTTATaGGGGCTACCACGCAGCTCATCCCAGTCCCACTGGAGTCTTTTC +
Preference number: 1 (lower is better)
Translates to: ASIGQVRSPTNLSAL*GLPRSSSQSHWSLF
Trigger: GAAAAGACTCCAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTGGGAGACCTAACTTGGCCTATACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR TCA 90 bp CAGGGCCAGAATTTGCAGAGGTCAAGAAGCTTCTTTATGATTAAGTaGATGACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTT +
Preference number: 1 (lower is better)
Translates to: QGQNLQRSRSFFMIK*MTPARSVLASPRLL
Trigger: AAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTCATTCACTTAATCATAAAGAAGCTTCTTGACCTCTGCAAATTCTGGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR GCA 90 bp AGCTTTAAAAGTCCTTTTACTCTACGGATGTTATGTGGAAAGGCTTaGTTACTCTCGGCTCCATTGCTCTTAAACCTCTTGGTCTTGCTG +
Preference number: 1 (lower is better)
Translates to: SFKSPFTLRMLCGKA*LLSAPLLLNLLVLL
Trigger: CAGCAAGACCAAGAGGTTTAAGAGCAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAACATCCGTAGAGTAAAAGGACTTTTAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR TCA 90 bp GAGGAGAGGAAGGAAATGCACAGGCCAATTGTTGCTGGGATGATATaGTTTTGTAAGCCCTCTATGATCAGTGTTAATCCTGTGTTGTTT +
Preference number: 1 (lower is better)
Translates to: EERKEMHRPIVAGMI*FCKPSMISVNPVLF
Trigger: AAACAACACAGGATTAACACTGATCATAGAGGGCTTACAAAATCATATCATCCCAGCAACAATTGGCCTGTGCATTTCCTTCCTCTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGGGACCTGGCCCTTTCTaGTCACTTGTCCCCTTTCAC +
Preference number: 2 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLGPGPF*SLVPFH
Trigger: GTGAAAGGGGACAAGTGACCAGAAAGGGCCAGGTCC...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR GCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGGAGTGTTTCTTCAGCTaGCAGGGAAAGATGTGTGCA +
Preference number: 2 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLECFFS*QGKMCA
Trigger: TGCACACATCTTTCCCTGGCAGCTGAAGAAACACTC...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGCAAGATGACACAAAGTaGTCAAGCCAGGTGAGAACT +
Preference number: 2 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLQDDTK*SSQVRT
Trigger: AGTTCTCACCTGGCTTGATCACTTTGTGTCATCTTG...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR GCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGCCAGGGAAAGATGTGTaGATGAATTCTCTTACCCAT +
Preference number: 2 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLPGKDV*MNSLTH
Trigger: ATGGGTAAGAGAATTCATGCACACATCTTTCCCTGG...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGGGACCTGGCCCTTTCTaGTCACTTGTCCCCTTTCAC +
Preference number: 2 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGGPGPF*SLVPFH
Trigger: GTGAAAGGGGACAAGTGACCAGAAAGGGCCAGGTCC...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCGAAATGGTCACCCAGTaGCAGAGGACCTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLEMVTQ*QRTWPF
Trigger: AAAGGGCCAGGTCCTCTGTCACTGGGTGACCATTTC...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGTTCTTTATGATTAAGTaGATGACCCCAGCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLFFMIK*MTPARS
Trigger: TGACCTTGCTGGGGTCATTCACTTAATCATAAAGAA...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGTTAAATGCCATTGCCTaGTGGGGAAGAGGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGLNAIA*WGRGEE
Trigger: TTCCTCTCCTCTTCCCCATCAGGCAATGGCATTTAA...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAATTAAATGCCATTGCCTaGTGGGGAAGAGGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKLNAIA*WGRGEE
Trigger: TTCCTCTCCTCTTCCCCATCAGGCAATGGCATTTAA...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR GCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAAAGGAGAGGAAGGAAATaGACAGGCCAATTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKRRGRK*TGQLLL
Trigger: CAGCAACAATTGGCCTGTGCATTTCCTTCCTCTCCT...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR GCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCAGGAGAGGAAGGAAATaGACAGGCCAATTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLRRGRK*TGQLLL
Trigger: CAGCAACAATTGGCCTGTGCATTTCCTTCCTCTCCT...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAAGAAATGGTCACCCAGTaGCAGAGGACCTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: RTVKVFRIHVRARICRGQEMVTQ*QRTWPF
Trigger: AAAGGGCCAGGTCCTCTGTCACTGGGTGACCATTTC...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGGGAAAGATGTGTGCATaGATTCTCTTACCCATGTCA +
Preference number: 2 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGGKMCA*ILLPMS
Trigger: TGACATGGGTAAGAGAATTCATGCACACATCTTTCC...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR GCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCTTATGTGGAAAGGCTTaGTTACTCTCGGCTCCATTG +
Preference number: 2 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLLCGKA*LLSAPL
Trigger: CAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAA...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR GCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGGCACAGGCCAATTGTTaGTGGGATGATATGATTTTG +
Preference number: 2 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGAQANC*WDDMIL
Trigger: CAAAATCATATCATCCCAGCAACAATTGGCCTGTGC...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGCAATTGTTGCTGGGATaGTATGATTTTGTAAGCCCT +
Preference number: 2 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGQLLLG*YDFVSP
Trigger: AGGGCTTACAAAATCATATCATCCCAGCAACAATTG...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR GCA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTATCCCACCAACCTCTCTaGTTTATGAGGGCTACCACG +
Preference number: 2 (lower is better)
Translates to: AISGETVSDLQDLSSDNVSHQPL*FMRATT
Trigger: CGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTGGGA...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCAGTTGCTGGGATGATATaGTTTTGTAAGCCCTCTATG +
Preference number: 2 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPVAGMI*FCKPSM
Trigger: CATAGAGGGCTTACAAAATCATATCATCCCAGCAAC...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAATGTTTTGACTTTACATaGGCACTGGTGACTGATTTT +
Preference number: 2 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKCFDFT*ALVTDF
Trigger: AAAATCAGTCACCAGTGCTCATGTAAAGTCAAAACA...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAACAAGATGACACAAAGTaGTCAAGCCAGGTGAGAACT +
Preference number: 2 (lower is better)
Translates to: RTVKVFRIHVRARICRGQQDDTK*SSQVRT
Trigger: AGTTCTCACCTGGCTTGATCACTTTGTGTCATCTTG...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTATTCATAGGCATCAGCTaGTTTGAATGGGGTGACGTA +
Preference number: 2 (lower is better)
Translates to: AISGETVSDLQDLSSDNVFIGIS*FEWGDV
Trigger: TACGTCACCCCATTCAAATCAGCTGATGCCTATGAA...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CCA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTAGATACCAGGGATACATaGGCAAACTTCCTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: AISGETVSDLQDLSSDNVDTRDT*ANFLFL
Trigger: CAGAAACAGGAAGTTTGCCCATGTATCCCTGGTATC...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR GCA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACATTATGTGGAAAGGCTTaGTTACTCTCGGCTCCATTG +
Preference number: 2 (lower is better)
Translates to: IESFAQLRSICPSYGPVTLCGKA*LLSAPL
Trigger: CAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAA...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAACAATTGTTGCTGGGATaGTATGATTTTGTAAGCCCT +
Preference number: 2 (lower is better)
Translates to: RTVKVFRIHVRARICRGQQLLLG*YDFVSP
Trigger: AGGGCTTACAAAATCATATCATCCCAGCAACAATTG...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACAATGAGCACTGGTGACTaGTTTTTAACACACACACAC +
Preference number: 2 (lower is better)
Translates to: IESFAQLRSICPSYGPVTMSTGD*FLTHTH
Trigger: GTGTGTGTGTGTTAAAAATCAGTCACCAGTGCTCAT...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTATTACATGAGCACTGGTaGCTGATTTTTAACACACAC +
Preference number: 2 (lower is better)
Translates to: AISGETVSDLQDLSSDNVLHEHW*LIFNTH
Trigger: GTGTGTGTTAAAAATCAGTCACCAGTGCTCATGTAA...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR TCA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTATTCTTTATGATTAAGTaGATGACCCCAGCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: AISGETVSDLQDLSSDNVFFMIK*MTPARS
Trigger: TGACCTTGCTGGGGTCATTCACTTAATCATAAAGAA...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CCA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCAACCTCTTGGTCTTGCTaGCAAAATTTATATGAATCA +
Preference number: 2 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPTSWSC*QNLYES
Trigger: TGATTCATATAAATTTTGCCAGCAAGACCAAGAGGT...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR TCA 72 bp GGCCAAGTTAGGTCTCCCACCAACCTCTCTGCTTTATaGGGGCTACCACGCAGCTCATCCCAGTCCCACTGG +
Preference number: 3 (lower is better)
Translates to: GQVRSPTNLSAL*GLPRSSSQSHW
Trigger: CCAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTGGGAGACCTAACTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR TCA 72 bp TGTATACATGATAGTTTGCTAGAAATGGTCACCCAGTaGCAGAGGACCTGGCCCTTTCTGGTCACTTGTCCC +
Preference number: 3 (lower is better)
Translates to: CIHDSLLEMVTQ*QRTWPFLVTCP
Trigger: GGGACAAGTGACCAGAAAGGGCCAGGTCCTCTGTCACTGGGTGACCATTTCTAGCAAACTATCATGTATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCTCCCCTTTCACTGTTTaGGGGACTTCTCTAGGAGGT +
Preference number: 3 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLSPFTV*GTSLGG
Trigger: ACCTCCTAGAGAAGTCCCCAAAACAGTGAAAGGGGA...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCGCCCTTTCTGGTCACTaGTCCCCTTTCACTGTTTTG +
Preference number: 3 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLALSGH*SPFTVL
Trigger: CAAAACAGTGAAAGGGGACAAGTGACCAGAAAGGGC...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAATTACTCTCGGCTCCATaGCTCTTAAACCTCTTGGTC +
Preference number: 3 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKLLSAP*LLNLLV
Trigger: GACCAAGAGGTTTAAGAGCAATGGAGCCGAGAGTAA...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCAGCCCTTTCTGGTCACTaGTCCCCTTTCACTGTTTTG +
Preference number: 3 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPALSGH*SPFTVL
Trigger: CAAAACAGTGAAAGGGGACAAGTGACCAGAAAGGGC...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCAAAGTCAGATAGGAGCTaGGAAGTAGTGCTGGACCTC +
Preference number: 3 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPKSDRS*EVVLDL
Trigger: GAGGTCCAGCACTACTTCCAAGCTCCTATCTGACTT...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR GCA 72 bp TCCTTCTTATGGACCTGTGACATTCACCTGTCAATCTaGTCTTACAAGCCTCTATCAGATGCAAGGTGCTTC +
Preference number: 3 (lower is better)
Translates to: SFLWTCDIHLSI*SYKPLSDARCF
Trigger: GAAGCACCTTGCATCTGATAGAGGCTTGTAAGAGCAGATTGACAGGTGAATGTCACAGGTCCATAAGAAGGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGTTGCTCTTAAACCTCTaGGTCTTGCTGGCAAAATTT +
Preference number: 3 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGLLLNL*VLLAKF
Trigger: AAATTTTGCCAGCAAGACCAAGAGGTTTAAGAGCAA...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCAGTTATGTGGAAAGGCTaGCTTACTCTCGGCTCCATT +
Preference number: 3 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPVMWKG*LTLGSI
Trigger: AATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAAC...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR GCA 72 bp TTAAGAGTGTTTCTTCAGCTGCCAGGGAAAGATGTGTaGATGAATTCTCTTACCCATGTCAAGGCCAGTTAC +
Preference number: 3 (lower is better)
Translates to: LRVFLQLPGKDV*MNSLTHVKASY
Trigger: GTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCTGGCAGCTGAAGAAACACTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR GCA 72 bp TCACCTGTCAATCTGCTCTTACAAGCCTCTATCAGATaGAAGGTGCTTCTGAGATTTTTGATACAGGGATGC +
Preference number: 3 (lower is better)
Translates to: SPVNLLLQASIR*KVLLRFLIQGC
Trigger: GCATCCCTGTATCAAAAATCTCAGAAGCACCTTGCATCTGATAGAGGCTTGTAAGAGCAGATTGACAGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR GCA 72 bp GACTTGTTGTCTCATCACCTGTCCTTGATATTCTACTaGTACTCCTCATCAACAATTGTGGGTTACTGGGAC +
Preference number: 3 (lower is better)
Translates to: DLLSHHLSLIFY*YSSSTIVGYWD
Trigger: GTCCCAGTAACCCACAATTGTTGATGAGGAGTAGCAGTAGAATATCAAGGACAGGTGATGAGACAACAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR GCA 72 bp TGTTTTCAAATTCTTTCCAGTGTACCCTCTATTCCCTaGCCTTTGCGGGATAGACTTGTTGTCTCATCACCT +
Preference number: 3 (lower is better)
Translates to: CFQILSSVPSIP*PLRDRLVVSSP
Trigger: AGGTGATGAGACAACAAGTCTATCCCGCAAAGGGCAGGGAATAGAGGGTACACTGGAAAGAATTTGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAATGCAATACTATGCCTTaGTATGATGAACTGACTCAC +
Preference number: 3 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKCNTMP*YDELTH
Trigger: GTGAGTCAGTTCATCATACAAAGGCATAGTATTGCA...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR CCA 72 bp TTCTACTGCTACTCCTCATCAACAATTGTGGGTTACTaGGACTCTAGAATAATATCACAAAGCCAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: FYCYSSSTIVGY*DSRIISQSQRP
Trigger: TGGCCTCTGGCTTTGTGATATTATTCTAGAGTCCCAGTAACCCACAATTGTTGATGAGGAGTAGCAGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR TCA 72 bp TCTTTGAAAACCTCATTATTATTCAAAGAGTATTATTaGTTGCCTACCGCAACCGGGGGCCATTCTAGGTGC +
Preference number: 3 (lower is better)
Translates to: SLKTSLLFKEYY*LPTATGGHSRC
Trigger: GCACCTAGAATGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTTTTCAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCATTGCTCTTAAACCTCTaGGTCTTGCTGGCAAAATTT +
Preference number: 3 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPLLLNL*VLLAKF
Trigger: AAATTTTGCCAGCAAGACCAAGAGGTTTAAGAGCAA...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACATTACTCTCGGCTCCATaGCTCTTAAACCTCTTGGTC +
Preference number: 3 (lower is better)
Translates to: IESFAQLRSICPSYGPVTLLSAP*LLNLLV
Trigger: GACCAAGAGGTTTAAGAGCAATGGAGCCGAGAGTAA...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTATCTAAAAGTTACAGGTaGTCCTCTCTTCCTTCCCCT +
Preference number: 3 (lower is better)
Translates to: AISGETVSDLQDLSSDNVSKSYR*SSLPSP
Trigger: AGGGGAAGGAAGAGAGGACAACCTGTAACTTTTAGA...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAACTTTGCTTAAAACATTaGAGGCCACAGAAAGGTTGG +
Preference number: 3 (lower is better)
Translates to: RTVKVFRIHVRARICRGQLCLKH*RPQKGW
Trigger: CCAACCTTTCTGTGGCCTCAAATGTTTTAAGCAAAG...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR TCA 72 bp AAGGAAATGCACAGGCCAATTGTTGCTGGGATGATATaGTTTTGTAAGCCCTCTATGATCAGTGTTAATCCT +
Preference number: 3 (lower is better)
Translates to: KEMHRPIVAGMI*FCKPSMISVNP
Trigger: AGGATTAACACTGATCATAGAGGGCTTACAAAATCATATCATCCCAGCAACAATTGGCCTGTGCATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR-3UTR CAA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAATGTATACATGATAGTTaGCTAGAAATGGTCACCCAG +
Preference number: 3 (lower is better)
Translates to: RTVKVFRIHVRARICRGQCIHDS*LEMVTQ
Trigger: CTGGGTGACCATTTCTAGCAAACTATCATGTATACA...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR TCA 72 bp GACTCTAGAATAATATCACAAAGCCAGAGGCCAGTCTaGCTTGCAGAATCTTTGAAAACCTCATTATTATTC +
Preference number: 3 (lower is better)
Translates to: DSRIISQSQRPV*LAESLKTSLLF
Trigger: GAATAATAATGAGGTTTTCAAAGATTCTGCAAGTCAGACTGGCCTCTGGCTTTGTGATATTATTCTAGAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR TCA 72 bp TGCTTAAAACATTTGAGGCCACAGAAAGGTTGGACATaGAATAAAGTCTTCGGGGTTATTTCATATTCTTTT +
Preference number: 3 (lower is better)
Translates to: CLKHLRPQKGWT*NKVFGVISYSF
Trigger: AAAAGAATATGAAATAACCCCGAAGACTTTATTTCATGTCCAACCTTTCTGTGGCCTCAAATGTTTTAAGCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGGCTGTTGCCCTTGGTTaGGGGCCTTTAGTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLAVALG*GPLVRK
Trigger: CTTCCTTACTAAAGGCCCTCAACCAAGGGCAACAGC...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGAGCCAGAGGCCAGTCTaGCTTGCAGAATCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLSQRPV*LAESLK
Trigger: TTTCAAAGATTCTGCAAGTCAGACTGGCCTCTGGCT...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGTTCATAGGCATCAGCTaGTTTGAATGGGGTGACGTA +
Preference number: 4 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLFIGIS*FEWGDV
Trigger: TACGTCACCCCATTCAAATCAGCTGATGCCTATGAA...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGCTCATCACCTGTCCTTaGTATTCTACTGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLLITCP*YSTATP
Trigger: AGGAGTAGCAGTAGAATATCAAGGACAGGTGATGAG...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGGATACCAGGGATACATaGGCAAACTTCCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLDTRDT*ANFLFL
Trigger: CAGAAACAGGAAGTTTGCCCATGTATCCCTGGTATC...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGCGGGGAATGGTTCTTTaGGGAGCTACCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGRGMVL*GATLAE
Trigger: CTCAGCCAAGGTAGCTCCTCAAAGAACCATTCCCCG...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAACGGGGAATGGTTCTTTaGGGAGCTACCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKRGMVL*GATLAE
Trigger: CTCAGCCAAGGTAGCTCCTCAAAGAACCATTCCCCG...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGCAATTGTTGCTGGGATaGTATGATTTTGTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLQLLLG*YDFVSP
Trigger: AGGGCTTACAAAATCATATCATCCCAGCAACAATTG...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCGGACCTGGCCCTTTCTaGTCACTTGTCCCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLGPGPF*SLVPFH
Trigger: GTGAAAGGGGACAAGTGACCAGAAAGGGCCAGGTCC...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp ACGGATGTTATGTGGAAAGGCTTGCTTACTCTCGGCTCCATTGCTCTTAAACCTGGACCTGGCCCTTTCTaGTCACTTGTCCCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: TDVMWKGLLTLGSIALKPGPGPF*SLVPFH
Trigger: GTGAAAGGGGACAAGTGACCAGAAAGGGCCAGGTCC...AGGTTTAAGAGCAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAACATCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAAGCTGTTGCCCTTGGTTaGGGGCCTTTAGTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKAVALG*GPLVRK
Trigger: CTTCCTTACTAAAGGCCCTCAACCAAGGGCAACAGC...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAAAACCTCTCTGCTTTATaGGGGCTACCACGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKNLSAL*GLPRSS
Trigger: TGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTT...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGTGCTGGTGGTGGTGGTaGAAGTCTGTTGATAAGCTG +
Preference number: 4 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGCWWWW*KSVDKL
Trigger: CAGCTTATCAACAGACTTCCACCACCACCACCAGCA...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537894.5
3UTR CAA 72 bp GTGTACCCTCTATTCCCTGCCCTTTGCGGGATAGACTaGTTGTCTCATCACCTGTCCTTGATATTCTACTGC +
Preference number: 4 (lower is better)
Translates to: VYPLFPALCGID*LSHHLSLIFYC
Trigger: GCAGTAGAATATCAAGGACAGGTGATGAGACAACAAGTCTATCCCGCAAAGGGCAGGGAATAGAGGGTACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGGAAATGGTCACCCAGTaGCAGAGGACCTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWEMVTQ*QRTWPF
Trigger: AAAGGGCCAGGTCCTCTGTCACTGGGTGACCATTTC...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCCGGACTCTGTTTATATaGTGGTGGTGGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLRTLFI*WWWWWK
Trigger: CTTCCACCACCACCACCAGCATATAAACAGAGTCCG...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537894.5
CDS-3UTR TCA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCACCAAGTCTCAGTTCCTaGGCACTTGGCGCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPPSLSS*ALGAFY
Trigger: GTAAAAGGCGCCAAGTGCTCAGGAACTGAGACTTGG...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp ACGGATGTTATGTGGAAAGGCTTGCTTACTCTCGGCTCCATTGCTCTTAAACCTTTAAATGCCATTGCCTaGTGGGGAAGAGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: TDVMWKGLLTLGSIALKPLNAIA*WGRGEE
Trigger: TTCCTCTCCTCTTCCCCATCAGGCAATGGCATTTAA...AGGTTTAAGAGCAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAACATCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGAACCTCTCTGCTTTATaGGGGCTACCACGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWNLSAL*GLPRSS
Trigger: TGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTT...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCAGCCAGAGGCCAGTCTaGCTTGCAGAATCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLSQRPV*LAESLK
Trigger: TTTCAAAGATTCTGCAAGTCAGACTGGCCTCTGGCT...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGTCCCACCAACCTCTCTaGTTTATGAGGGCTACCACG +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWSHQPL*FMRATT
Trigger: CGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTGGGA...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGAAGTTTTCCGGGGAATaGTTCTTTGAGGAGCTACCT +
Preference number: 4 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGKFSGE*FFEELP
Trigger: AGGTAGCTCCTCAAAGAACCATTCCCCGGAAAACTT...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR CAA 72 bp TACCCTCTATTCCCTGCCCTTTGCGGGATAGACTTGTaGTCTCATCACCTGTCCTTGATATTCTACTGCTAC +
Preference number: 4 (lower is better)
Translates to: YPLFPALCGIDL*SHHLSLIFYCY
Trigger: GTAGCAGTAGAATATCAAGGACAGGTGATGAGACAACAAGTCTATCCCGCAAAGGGCAGGGAATAGAGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGGTTGCTGGGATGATATaGTTTTGTAAGCCCTCTATG +
Preference number: 4 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGVAGMI*FCKPSM
Trigger: CATAGAGGGCTTACAAAATCATATCATCCCAGCAAC...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAACAAGATGACACAAAGTaGTCAAGCCAGGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKQDDTK*SSQVRT
Trigger: AGTTCTCACCTGGCTTGATCACTTTGTGTCATCTTG...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCCTCATCACCTGTCCTTaGTATTCTACTGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLLITCP*YSTATP
Trigger: AGGAGTAGCAGTAGAATATCAAGGACAGGTGATGAG...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAATTATGTGGAAAGGCTTaGTTACTCTCGGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKLCGKA*LLSAPL
Trigger: CAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAA...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCGAGGCCAGTCTGACTTaGAGAATCTTTGAAAACCTC +
Preference number: 4 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLEASLT*RIFENL
Trigger: GAGGTTTTCAAAGATTCTGCAAGTCAGACTGGCCTC...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGTGGCGCCTTTTACTTTaGGCCCTAGGTAGAACCACA +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWWRLLL*ALGRTT
Trigger: TGTGGTTCTACCTAGGGCCCAAAGTAAAAGGCGCCA...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCATGGCGCCTTTTACTTTaGGCCCTAGGTAGAACCACA +
Preference number: 4 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPWRLLL*ALGRTT
Trigger: TGTGGTTCTACCTAGGGCCCAAAGTAAAAGGCGCCA...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGTTTATATGCTGGTGGTaGTGGTGGAAGTCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGFICWW*WWKSVD
Trigger: ATCAACAGACTTCCACCACCACCACCAGCATATAAA...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537894.5
CDS-3UTR CCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAAACTCTGTTTATATGCTaGTGGTGGTGGTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKTLFIC*WWWWKS
Trigger: AGACTTCCACCACCACCACCAGCATATAAACAGAGT...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537894.5
3UTR CAA 72 bp CTTCCCATTCCTCCCAAAGAAAAGTCAGATAGGAGCTaGGAAGTAGTGCTGGACCTCAATACTAGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LPIPPKEKSDRS*EVVLDLNTSVQ
Trigger: CTGAACACTAGTATTGAGGTCCAGCACTACTTCCAAGCTCCTATCTGACTTTTCTTTGGGAGGAATGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAACCAAGTCTCAGTTCCTaGGCACTTGGCGCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: RTVKVFRIHVRARICRGQPSLSS*ALGAFY
Trigger: GTAAAAGGCGCCAAGTGCTCAGGAACTGAGACTTGG...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGAGGAGAGGAAGGAAATaGACAGGCCAATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWRRGRK*TGQLLL
Trigger: CAGCAACAATTGGCCTGTGCATTTCCTTCCTCTCCT...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCCCAGGGAAAGATGTGTaGATGAATTCTCTTACCCAT +
Preference number: 4 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLPGKDV*MNSLTH
Trigger: ATGGGTAAGAGAATTCATGCACACATCTTTCCCTGG...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCAGAGTGTTTCTTCAGCTaGCAGGGAAAGATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPECFFS*QGKMCA
Trigger: TGCACACATCTTTCCCTGGCAGCTGAAGAAACACTC...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGATTCACCTGTCAATCTaGTCTTACAAGCCTCTATCA +
Preference number: 4 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGIHLSI*SYKPLS
Trigger: TGATAGAGGCTTGTAAGAGCAGATTGACAGGTGAAT...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTACAGTTCCTGAGCACTTaGCGCCTTTTACTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: AISGETVSDLQDLSSDNVQFLST*RLLLWA
Trigger: GGCCCAAAGTAAAAGGCGCCAAGTGCTCAGGAACTG...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp ACGGATGTTATGTGGAAAGGCTTGCTTACTCTCGGCTCCATTGCTCTTAAACCTCAATTGTTGCTGGGATaGTATGATTTTGTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TDVMWKGLLTLGSIALKPQLLLG*YDFVSP
Trigger: AGGGCTTACAAAATCATATCATCCCAGCAACAATTG...AGGTTTAAGAGCAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAACATCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGCAAGATGACACAAAGTaGTCAAGCCAGGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWQDDTK*SSQVRT
Trigger: AGTTCTCACCTGGCTTGATCACTTTGTGTCATCTTG...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAATTCTTTATGATTAAGTaGATGACCCCAGCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKFFMIK*MTPARS
Trigger: TGACCTTGCTGGGGTCATTCACTTAATCATAAAGAA...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGTTATGTGGAAAGGCTTaGTTACTCTCGGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWLCGKA*LLSAPL
Trigger: CAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAA...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGGAGGCCAGTCTGACTTaGAGAATCTTTGAAAACCTC +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWEASLT*RIFENL
Trigger: GAGGTTTTCAAAGATTCTGCAAGTCAGACTGGCCTC...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAATATTTGTCCTTCTTATaGACCTGTGACATTCACCTG +
Preference number: 4 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKYLSFL*TCDIHL
Trigger: CAGGTGAATGTCACAGGTCCATAAGAAGGACAAATA...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGATATGCTGGTGGTGGTaGTGGAAGTCTGTTGATAAG +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWICWWW*WKSVDK
Trigger: CTTATCAACAGACTTCCACCACCACCACCAGCATAT...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537894.5
3UTR CAA 72 bp ATGTTATGTGGAAAGGCTTGCTTACTCTCGGCTCCATaGCTCTTAAACCTCTTGGTCTTGCTGGCAAAATTT +
Preference number: 4 (lower is better)
Translates to: MLCGKACLLSAP*LLNLLVLLAKF
Trigger: AAATTTTGCCAGCAAGACCAAGAGGTTTAAGAGCAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
3UTR CAA 72 bp AAGTCCTTTTACTCTACGGATGTTATGTGGAAAGGCTaGCTTACTCTCGGCTCCATTGCTCTTAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: KSFYSTDVMWKG*LTLGSIALKPL
Trigger: AAGAGGTTTAAGAGCAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAACATCCGTAGAGTAAAAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAATCTTCTTGTCATGGCTaGAGTTTTCCGGGGAATGGT +
Preference number: 4 (lower is better)
Translates to: RTVKVFRIHVRARICRGQSSCHG*SFPGNG
Trigger: ACCATTCCCCGGAAAACTTCAGCCATGACAAGAAGA...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGGTTGCTGGGATGATATaGTTTTGTAAGCCCTCTATG +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWVAGMI*FCKPSM
Trigger: CATAGAGGGCTTACAAAATCATATCATCCCAGCAAC...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGATGAGCACTGGTGACTaGTTTTTAACACACACACAC +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWMSTGD*FLTHTH
Trigger: GTGTGTGTGTGTTAAAAATCAGTCACCAGTGCTCAT...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCAATGAGCACTGGTGACTaGTTTTTAACACACACACAC +
Preference number: 4 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPMSTGD*FLTHTH
Trigger: GTGTGTGTGTGTTAAAAATCAGTCACCAGTGCTCAT...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCTGTTTTGACTTTACATaGGCACTGGTGACTGATTTT +
Preference number: 4 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLCFDFT*ALVTDF
Trigger: AAAATCAGTCACCAGTGCTCATGTAAAGTCAAAACA...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGACCTCTTGGTCTTGCTaGCAAAATTTATATGAATCA +
Preference number: 4 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGTSWSC*QNLYES
Trigger: TGATTCATATAAATTTTGCCAGCAAGACCAAGAGGT...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCATTACATGAGCACTGGTaGCTGATTTTTAACACACAC +
Preference number: 4 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPLHEHW*LIFNTH
Trigger: GTGTGTGTTAAAAATCAGTCACCAGTGCTCATGTAA...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAATTCATAGGCATCAGCTaGTTTGAATGGGGTGACGTA +
Preference number: 4 (lower is better)
Translates to: RTVKVFRIHVRARICRGQFIGIS*FEWGDV
Trigger: TACGTCACCCCATTCAAATCAGCTGATGCCTATGAA...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACAGTCAGGGCCAGAATTTaGAGAGGTCAAGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IESFAQLRSICPSYGPVTVRARI*RGQEAS
Trigger: AGAAGCTTCTTGACCTCTGCAAATTCTGGCCCTGAC...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGATTCACCTGTCAATCTaGTCTTACAAGCCTCTATCA +
Preference number: 4 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWIHLSI*SYKPLS
Trigger: TGATAGAGGCTTGTAAGAGCAGATTGACAGGTGAAT...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCTCCTTGATATTCTACTaGTACTCCTCATCAACAATT +
Preference number: 4 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLSLIFY*YSSSTI
Trigger: AATTGTTGATGAGGAGTAGCAGTAGAATATCAAGGA...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAAAAGTTTTCCGGGGAATaGTTCTTTGAGGAGCTACCT +
Preference number: 4 (lower is better)
Translates to: RTVKVFRIHVRARICRGQKFSGE*FFEELP
Trigger: AGGTAGCTCCTCAAAGAACCATTCCCCGGAAAACTT...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAAGATACCAGGGATACATaGGCAAACTTCCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RTVKVFRIHVRARICRGQDTRDT*ANFLFL
Trigger: CAGAAACAGGAAGTTTGCCCATGTATCCCTGGTATC...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTACCAGGGAAAGATGTGTaGATGAATTCTCTTACCCAT +
Preference number: 4 (lower is better)
Translates to: AISGETVSDLQDLSSDNVPGKDV*MNSLTH
Trigger: ATGGGTAAGAGAATTCATGCACACATCTTTCCCTGG...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTATTTGTAAGCCCTCTATaGTCAGTGTTAATCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AISGETVSDLQDLSSDNVFVSPL*SVLILC
Trigger: ACACAGGATTAACACTGATCATAGAGGGCTTACAAA...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAATTTGTAAGCCCTCTATaGTCAGTGTTAATCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RTVKVFRIHVRARICRGQFVSPL*SVLILC
Trigger: ACACAGGATTAACACTGATCATAGAGGGCTTACAAA...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACAGGAAAGATGTGTGCATaGATTCTCTTACCCATGTCA +
Preference number: 4 (lower is better)
Translates to: IESFAQLRSICPSYGPVTGKMCA*ILLPMS
Trigger: TGACATGGGTAAGAGAATTCATGCACACATCTTTCC...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR GCA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCATCCTTGATATTCTACTaGTACTCCTCATCAACAATT +
Preference number: 4 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPSLIFY*YSSSTI
Trigger: AATTGTTGATGAGGAGTAGCAGTAGAATATCAAGGA...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTATATTTGTCCTTCTTATaGACCTGTGACATTCACCTG +
Preference number: 4 (lower is better)
Translates to: AISGETVSDLQDLSSDNVYLSFL*TCDIHL
Trigger: CAGGTGAATGTCACAGGTCCATAAGAAGGACAAATA...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR TCA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTATGTTTTGACTTTACATaGGCACTGGTGACTGATTTT +
Preference number: 4 (lower is better)
Translates to: AISGETVSDLQDLSSDNVCFDFT*ALVTDF
Trigger: AAAATCAGTCACCAGTGCTCATGTAAAGTCAAAACA...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAAACCTCTTGGTCTTGCTaGCAAAATTTATATGAATCA +
Preference number: 4 (lower is better)
Translates to: RTVKVFRIHVRARICRGQTSWSC*QNLYES
Trigger: TGATTCATATAAATTTTGCCAGCAAGACCAAGAGGT...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CCA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAAACAATTGTGGGTTACTaGGACTCTAGAATAATATCA +
Preference number: 4 (lower is better)
Translates to: RTVKVFRIHVRARICRGQTIVGY*DSRIIS
Trigger: TGATATTATTCTAGAGTCCCAGTAACCCACAATTGT...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGTCCCCTTTCACTGTTTaGGGGACTTCTCTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLSPFTV*GTSLGG
Trigger: ACCTCCTAGAGAAGTCCCCAAAACAGTGAAAGGGGA...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGACTCCTCATCAACAATaGTGGGTTACTGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLTPHQQ*WVTGTL
Trigger: TAGAGTCCCAGTAACCCACAATTGTTGATGAGGAGT...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp CACCAACCTCTCTGCTTTATGAGGGCTACCACGCAGCTCATCCCAGTCCCACTGGTGCTTCTGAGATTTTaGATACAGGGATGCAGCTTA +
Preference number: 5 (lower is better)
Translates to: HQPLCFMRATTQLIPVPLVLLRF*IQGCSL
Trigger: TAAGCTGCATCCCTGTATCAAAAATCTCAGAAGCAC...CAGTGGGACTGGGATGAGCTGCGTGGTAGCCCTCATAAAGCAGAGAGGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS TCA 90 bp GGACATCTTCTTGTCATGGCTGAAGTTTTCCGGGGAATGGTTCTTTaGGGAGCTACCTTGGCTGAGGCTCTCTTGGTTGAATCTCTAAGT +
Preference number: 5 (lower is better)
Translates to: GHLLVMAEVFRGMVL*GATLAEALLVESLS
Trigger: ACTTAGAGATTCAACCAAGAGAGCCTCAGCCAAGGTAGCTCCTCAAAGAACCATTCCCCGGAAAACTTCAGCCATGACAAGAAGATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS CCA 90 bp GTACTGATGGACATCTTCTTGTCATGGCTGAAGTTTTCCGGGGAATaGTTCTTTGAGGAGCTACCTTGGCTGAGGCTCTCTTGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: VLMDIFLSWLKFSGE*FFEELPWLRLSWLN
Trigger: ATTCAACCAAGAGAGCCTCAGCCAAGGTAGCTCCTCAAAGAACCATTCCCCGGAAAACTTCAGCCATGACAAGAAGATGTCCATCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ACGGATGTTATGTGGAAAGGCTTGCTTACTCTCGGCTCCATTGCTCTTAAACCTTCCCCTTTCACTGTTTaGGGGACTTCTCTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: TDVMWKGLLTLGSIALKPSPFTV*GTSLGG
Trigger: ACCTCCTAGAGAAGTCCCCAAAACAGTGAAAGGGGA...AGGTTTAAGAGCAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAACATCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCAAGTCAGATAGGAGCTaGGAAGTAGTGCTGGACCTC +
Preference number: 5 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLKSDRS*EVVLDL
Trigger: GAGGTCCAGCACTACTTCCAAGCTCCTATCTGACTT...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS CCA 90 bp GTAGAACCACAGATACAGGTAGTACTGATGGACATCTTCTTGTCATaGCTGAAGTTTTCCGGGGAATGGTTCTTTGAGGAGCTACCTTGG +
Preference number: 5 (lower is better)
Translates to: VEPQIQVVLMDIFLS*LKFSGEWFFEELPW
Trigger: CCAAGGTAGCTCCTCAAAGAACCATTCCCCGGAAAACTTCAGCCATGACAAGAAGATGTCCATCAGTACTACCTGTATCTGTGGTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCACGCTGTTGCCCTTGGTaGAGGGCCTTTAGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPRCCPW*RAFSKE
Trigger: TTCCTTACTAAAGGCCCTCAACCAAGGGCAACAGCG...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGCTGATGGACATCTTCTaGTCATGGCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGLMDIF*SWLKFS
Trigger: GGAAAACTTCAGCCATGACAAGAAGATGTCCATCAG...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCATCAGTTCCTGAGCACTaGGCGCCTTTTACTTTGGGC +
Preference number: 5 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPSVPEH*APFTLG
Trigger: GCCCAAAGTAAAAGGCGCCAAGTGCTCAGGAACTGA...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AGACTTCTTATCAGACTAGTGGGCCAACCACACTTCCCATTCCTCCCAAAGAAAGTTATGTGGAAAGGCTaGCTTACTCTCGGCTCCATT +
Preference number: 5 (lower is better)
Translates to: RLLIRLVGQPHFPFLPKKVMWKG*LTLGSI
Trigger: AATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAAC...TTTCTTTGGGAGGAATGGGAAGTGTGGTTGGCCCACTAGTCTGATAAGAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCTCTAAAAGTTACAGGTaGTCCTCTCTTCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLSKSYR*SSLPSP
Trigger: AGGGGAAGGAAGAGAGGACAACCTGTAACTTTTAGA...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp GACCCCAGCAAGGTCAGTATTAGCTTCACCAAGACTTCTTATCAGACTAGTGGGATTCAAAGAGTATTATaGATTGCCTACCGCAACCGG +
Preference number: 5 (lower is better)
Translates to: DPSKVSISFTKTSYQTSGIQRVL*IAYRNR
Trigger: CCGGTTGCGGTAGGCAATCAATAATACTCTTTGAAT...CCCACTAGTCTGATAAGAAGTCTTGGTGAAGCTAATACTGACCTTGCTGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ACGGATGTTATGTGGAAAGGCTTGCTTACTCTCGGCTCCATTGCTCTTAAACCTTCTCATCACCTGTCCTaGATATTCTACTGCTACTCC +
Preference number: 5 (lower is better)
Translates to: TDVMWKGLLTLGSIALKPSHHLS*IFYCYS
Trigger: GGAGTAGCAGTAGAATATCAAGGACAGGTGATGAGA...AGGTTTAAGAGCAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAACATCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTACGCTGTTGCCCTTGGTaGAGGGCCTTTAGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: AISGETVSDLQDLSSDNVRCCPW*RAFSKE
Trigger: TTCCTTACTAAAGGCCCTCAACCAAGGGCAACAGCG...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTATCAGTTCCTGAGCACTaGGCGCCTTTTACTTTGGGC +
Preference number: 5 (lower is better)
Translates to: AISGETVSDLQDLSSDNVSVPEH*APFTLG
Trigger: GCCCAAAGTAAAAGGCGCCAAGTGCTCAGGAACTGA...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGGTTATGTGGAAAGGCTaGCTTACTCTCGGCTCCATT +
Preference number: 5 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWVMWKG*LTLGSI
Trigger: AATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAAC...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACAGTAAAAGTAGCGCTGTaGCCCTTGGTTGAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: IESFAQLRSICPSYGPVTVKVAL*PLVEGL
Trigger: AAGGCCCTCAACCAAGGGCAACAGCGCTACTTTTAC...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGTTGGCTGAGGCTCTCTaGGTTGAATCTCTAAGTACA +
Preference number: 5 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWLAEAL*VESLST
Trigger: TGTACTTAGAGATTCAACCAAGAGAGCCTCAGCCAA...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCACTGATGGACATCTTCTaGTCATGGCTGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPLMDIF*SWLKFS
Trigger: GGAAAACTTCAGCCATGACAAGAAGATGTCCATCAG...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ACGGATGTTATGTGGAAAGGCTTGCTTACTCTCGGCTCCATTGCTCTTAAACCTTTGCTCTTAAACCTCTaGGTCTTGCTGGCAAAATTT +
Preference number: 5 (lower is better)
Translates to: TDVMWKGLLTLGSIALKPLLLNL*VLLAKF
Trigger: AAATTTTGCCAGCAAGACCAAGAGGTTTAAGAGCAA...AGGTTTAAGAGCAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAACATCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAAGCCCTTTCTGGTCACTaGTCCCCTTTCACTGTTTTG +
Preference number: 5 (lower is better)
Translates to: RTVKVFRIHVRARICRGQALSGH*SPFTVL
Trigger: CAAAACAGTGAAAGGGGACAAGTGACCAGAAAGGGC...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTAGCCCTTTCTGGTCACTaGTCCCCTTTCACTGTTTTG +
Preference number: 5 (lower is better)
Translates to: AISGETVSDLQDLSSDNVALSGH*SPFTVL
Trigger: CAAAACAGTGAAAGGGGACAAGTGACCAGAAAGGGC...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAAAAGTCAGATAGGAGCTaGGAAGTAGTGCTGGACCTC +
Preference number: 5 (lower is better)
Translates to: RTVKVFRIHVRARICRGQKSDRS*EVVLDL
Trigger: GAGGTCCAGCACTACTTCCAAGCTCCTATCTGACTT...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGTCTAAAAGTTACAGGTaGTCCTCTCTTCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWSKSYR*SSLPSP
Trigger: AGGGGAAGGAAGAGAGGACAACCTGTAACTTTTAGA...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCAACTCCTCATCAACAATaGTGGGTTACTGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPTPHQQ*WVTGTL
Trigger: TAGAGTCCCAGTAACCCACAATTGTTGATGAGGAGT...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AGGGAAAGATGTGTGCATGAATTCTCTTACCCATGTCAAGGCCAGTTACAGCTCTTGTCTTTTCCAGTTTaGTCCCATCGTTTATCCCTA +
Preference number: 5 (lower is better)
Translates to: RERCVHEFSYPCQGQLQLLSFPV*SHRLSL
Trigger: TAGGGATAAACGATGGGACAAAACTGGAAAAGACAA...GAGCTGTAACTGGCCTTGACATGGGTAAGAGAATTCATGCACACATCTTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537894.5
CDS-3UTR CAA 90 bp ACGGATGTTATGTGGAAAGGCTTGCTTACTCTCGGCTCCATTGCTCTTAAACCTTTGTCTTTTCCAGTTTaGTCCCATCGTTTATCCTAT +
Preference number: 5 (lower is better)
Translates to: TDVMWKGLLTLGSIALKPLSFPV*SHRLSY
Trigger: ATAGGATAAACGATGGGACAAAACTGGAAAAGACAA...AGGTTTAAGAGCAATGGAGCCGAGAGTAAGCAAGCCTTTCCACATAACATCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313851.3
CDS-3UTR CAA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCACTTTGCTTAAAACATTaGAGGCCACAGAAAGGTTGG +
Preference number: 5 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPLCLKH*RPQKGW
Trigger: CCAACCTTTCTGTGGCCTCAAATGTTTTAAGCAAAG...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ACTGTCATTCAACAAATATGCACAAAGCACCCACTAGATACCAGGGATACATGGGTGCTTCTGAGATTTTaGATACAGGGATGCAGCTTA +
Preference number: 5 (lower is better)
Translates to: TVIQQICTKHPLDTRDTWVLLRF*IQGCSL
Trigger: TAAGCTGCATCCCTGTATCAAAAATCTCAGAAGCAC...CCATGTATCCCTGGTATCTAGTGGGTGCTTTGTGCATATTTGTTGAATGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AACCTCATTATTATTCAAAGAGTATTATTGATTGCCTACCGCAACCGGGGGCCAATTCAAAGAGTATTATaGATTGCCTACCGCAACCGG +
Preference number: 5 (lower is better)
Translates to: NLIIIQRVLLIAYRNRGPIQRVL*IAYRNR
Trigger: CCGGTTGCGGTAGGCAATCAATAATACTCTTTGAAT...TGGCCCCCGGTTGCGGTAGGCAATCAATAATACTCTTTGAATAATAATGAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACAAGACAAGGCTTCCCGTaGAGTAATATAGCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: IESFAQLRSICPSYGPVTRQGFP*SNIAKQ
Trigger: CTGCTTGGCTATATTACTCAACGGGAAGCCTTGTCT...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp GCAATTTCAGGTGAAACAGTCTCTGATCTCCAGGACTTAAGTTCTGATAATGTATTGGCTGAGGCTCTCTaGGTTGAATCTCTAAGTACA +
Preference number: 5 (lower is better)
Translates to: AISGETVSDLQDLSSDNVLAEAL*VESLST
Trigger: TGTACTTAGAGATTCAACCAAGAGAGCCTCAGCCAA...TACATTATCAGAACTTAAGTCCTGGAGATCAGAGACTGTTTCACCTGAAATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACATCTCATCACCTGTCCTaGATATTCTACTGCTACTCC +
Preference number: 5 (lower is better)
Translates to: IESFAQLRSICPSYGPVTSHHLS*IFYCYS
Trigger: GGAGTAGCAGTAGAATATCAAGGACAGGTGATGAGA...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACACTTTGCTTAAAACATTaGAGGCCACAGAAAGGTTGG +
Preference number: 5 (lower is better)
Translates to: IESFAQLRSICPSYGPVTLCLKH*RPQKGW
Trigger: CCAACCTTTCTGTGGCCTCAAATGTTTTAAGCAAAG...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp AGAACTGTAAAGGTATTTAGAATACATGTCAGGGCCAGAATTTGCAGAGGTCAATGCAATACTATGCCTTaGTATGATGAACTGACTCAC +
Preference number: 5 (lower is better)
Translates to: RTVKVFRIHVRARICRGQCNTMP*YDELTH
Trigger: GTGAGTCAGTTCATCATACAAAGGCATAGTATTGCA...TTGACCTCTGCAAATTCTGGCCCTGACATGTATTCTAAATACCTTTACAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACATTGCTCTTAAACCTCTaGGTCTTGCTGGCAAAATTT +
Preference number: 5 (lower is better)
Translates to: IESFAQLRSICPSYGPVTLLLNL*VLLAKF
Trigger: AAATTTTGCCAGCAAGACCAAGAGGTTTAAGAGCAA...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS-3UTR CAA 90 bp ATAGAATCTTTTGCCCAACTTAGATCTATTTGTCCTTCTTATGGACCTGTGACATGCAATACTATGCCTTaGTATGATGAACTGACTCAC +
Preference number: 5 (lower is better)
Translates to: IESFAQLRSICPSYGPVTCNTMP*YDELTH
Trigger: GTGAGTCAGTTCATCATACAAAGGCATAGTATTGCA...TGTCACAGGTCCATAAGAAGGACAAATAGATCTAAGTTGGGCAAAAGATTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS TCA 72 bp CTTGTCATGGCTGAAGTTTTCCGGGGAATGGTTCTTTaGGGAGCTACCTTGGCTGAGGCTCTCTTGGTTGAA +
Preference number: 6 (lower is better)
Translates to: LVMAEVFRGMVL*GATLAEALLVE
Trigger: TTCAACCAAGAGAGCCTCAGCCAAGGTAGCTCCTCAAAGAACCATTCCCCGGAAAACTTCAGCCATGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS CCA 72 bp GACATCTTCTTGTCATGGCTGAAGTTTTCCGGGGAATaGTTCTTTGAGGAGCTACCTTGGCTGAGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: DIFLSWLKFSGE*FFEELPWLRLS
Trigger: AGAGAGCCTCAGCCAAGGTAGCTCCTCAAAGAACCATTCCCCGGAAAACTTCAGCCATGACAAGAAGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS CAA 72 bp ATCTCTAAGTACAAGAGCATAAGACAAGGCTTCCCGTaGAGTAATATAGCCAAGCAGCTGTTGGTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: ISKYKSIRQGFP*SNIAKQLLVLK
Trigger: CTTCAGCACCAACAGCTGCTTGGCTATATTACTCAACGGGAAGCCTTGTCTTATGCTCTTGTACTTAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5
CDS CAA 72 bp GAACCACAGATACAGGTAGTACTGATGGACATCTTCTaGTCATGGCTGAAGTTTTCCGGGGAATGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: EPQIQVVLMDIF*SWLKFSGEWFF
Trigger: AAAGAACCATTCCCCGGAAAACTTCAGCCATGACAAGAAGATGTCCATCAGTACTACCTGTATCTGTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313851.3
ENST00000537894.5