Pregenerated sensors for FAM216A (Homo sapiens)
Ensembl gene IDs: ENSG00000204856Ensembl transcript IDs: ENST00000377673.10, ENST00000538285.6, ENST00000546396.1, ENST00000547539.1, ENST00000548449.1, ENST00000548869.1
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATaGAGCTGCGATATCAGAAGACCCCGAGTCCTCTCTCTCCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: HWPPKGMLYEHFRCR*SCDIRRPRVLSLQL Trigger: CAACTGGAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR GCA 90 bp | CCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGCTaGGATATCAGAAGACCCCGAGTCCTCTCTCTCCAGTTGATGTCG | + |
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Preference number: 1 (lower is better) Translates to: PPKGMLYEHFRCRCS*DIRRPRVLSLQLMS Trigger: CGACATCAACTGGAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR GCA 90 bp | GTTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTaGAGATGCAGCTGCGATATCAGAAGACCCCGAGTCCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: VSHWPPKGMLYEHFR*RCSCDIRRPRVLSL Trigger: GAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR TCA 90 bp | CTCCAGTTGATGTCGCCATGTAGTGCAAGGGTAATGCTGTTTCTGTaGGTAACGGGAGCTAAGGCGGCTTCTGTGATGAGTGAGGACACC | + |
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Preference number: 1 (lower is better) Translates to: LQLMSPCSARVMLFL*VTGAKAASVMSEDT Trigger: GGTGTCCTCACTCATCACAGAAGCCGCCTTAGCTCCCGTTACTCACAGAAACAGCATTACCCTTGCACTACATGGCGACATCAACTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGCAGATGCAGCTGCGATATCAGAAGACCCCGAGTCCTCTCTCTCCAGTTGACACCTGGCTTTTGTaGGCTGTGCTGAAGTACGTG | + |
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Preference number: 2 (lower is better) Translates to: QVQMQLRYQKTPSPLSPVDTWLL*AVLKYV Trigger: CACGTACTTCAGCACAGCTCACAAAAGCCAGGTGTC...AACTGGAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGCAGATGCAGCTGCGATATCAGAAGACCCCGAGTCCTCTCTCTCCAGTTGTAATGCTGTTTCTGTaGGTAACGGGAGCTAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: QVQMQLRYQKTPSPLSPVVMLFL*VTGAKA Trigger: CGCCTTAGCTCCCGTTACTCACAGAAACAGCATTAC...AACTGGAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGGCTTCTGTGATGAGTaGGGACACCTGGCTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: FLTGRQRECCMSISGADAGFCDE*GHLAFV Trigger: CACAAAAGCCAGGTGTCCTCACTCATCACAGAAGCC...TGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR-3UTR TCA 90 bp | CGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGCTGCGATATCATCCTCTCTCTCCAGTTaGTGTCGCCATGTAGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: RQRECCMSISGADAAAISSSLSS*CRHVVQ Trigger: TTGCACTACATGGCGACATCAACTGGAGAGAGAGGA...TGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCATTTTGTGAGCTGTGCTaGAGTACGTGCATGTACTGC | + |
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Preference number: 2 (lower is better) Translates to: FLTGRQRECCMSISGADAFCELC*STCMYC Trigger: GCAGTACATGCACGTACTTCAGCACAGCTCACAAAA...TGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTGAGAGTACCTTGGCCAACATAGTGAGATGCTTTCTGTACAAACAATTTAGGTGCAGATGCAGCTaGGATATCAGAAGACCCCGA | + |
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Preference number: 2 (lower is better) Translates to: GGESTLANIVRCFLYKQFRCRCS*DIRRPR Trigger: TCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCT...AAATTGTTTGTACAGAAAGCATCTCACTATGTTGGCCAAGGTACTCTCACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTGAGAGTACCTTGGCCAACATAGTGAGATGCTTTCTGTACAAACAATTTCACTACACTCCAGCCTaGGTGAGAGAACAAAACCCT | + |
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Preference number: 2 (lower is better) Translates to: GGESTLANIVRCFLYKQFHYTPA*VREQNP Trigger: AGGGTTTTGTTCTCTCACCCAGGCTGGAGTGTAGTG...AAATTGTTTGTACAGAAAGCATCTCACTATGTTGGCCAAGGTACTCTCACCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTGAGAGTACCTTGGCCAACATAGTGAGATGCTTTCTGTACAAACAATTTAGTACGTGCATGTACTaGCTCTTCATTAACATCTTC | + |
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Preference number: 2 (lower is better) Translates to: GGESTLANIVRCFLYKQFSTCMY*LFINIF Trigger: GAAGATGTTAATGAAGAGGCAGTACATGCACGTACT...AAATTGTTTGTACAGAAAGCATCTCACTATGTTGGCCAAGGTACTCTCACCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR GCA 72 bp | GGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGCTaGGATATCAGAAGACCCCGAGTCCTCTCTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: GMLYEHFRCRCS*DIRRPRVLSLQ Trigger: CTGGAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR GCA 72 bp | GACCCTTCTTTGTTTCTCACTGGCCGCCAAAGGGAATaGTGTATGAGCATTTCAGGTGCAGATGCAGCTGCG | + |
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Preference number: 3 (lower is better) Translates to: DPSLFLTGRQRE*CMSISGADAAA Trigger: CGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAACAAAGAAGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR-3UTR CAA 90 bp | TTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGTCCTCTCTCTCCAGTaGATGTCGCCATGTAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: FLTGRQRECCMSISGADAVLSLQ*MSPCSA Trigger: TGCACTACATGGCGACATCAACTGGAGAGAGAGGAC...TGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | AGGTGCAGATGCAGCTGCGATATCAGAAGACCCCGAGTCCTCTCTCTCCAGTTGAGACCGCGAGCCGTGTaGGGGAGCAGCTGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RCRCSCDIRRPRVLSLQLRPRAV*GSSCPS Trigger: GCTGGGACAGCTGCTCCCGCACACGGCTCGCGGTCT...CAACTGGAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | AGGTGCAGATGCAGCTGCGATATCAGAAGACCCCGAGTCCTCTCTCTCCAGTTGCCCCGACAGCACGCGTaGGTCAGGCTGCTGGTATTC | + |
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Preference number: 4 (lower is better) Translates to: RCRCSCDIRRPRVLSLQLPRQHA*VRLLVF Trigger: GAATACCAGCAGCCTGACGCACGCGTGCTGTCGGGG...CAACTGGAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | CCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGCTGCGATATCAGAGAGAGGCGGCTCGGATaGTGGCTTCTCGCCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PKGMLYEHFRCRCSCDIRERRLG*WLLAPP Trigger: CGGAGGGGCGAGAAGCCAGCATCCGAGCCGCCTCTC...TCTGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR CCA 90 bp | TTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAAGGCGGCTCGGATGCTaGCTTCTCGCCCCTCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: FLTGRQRECCMSISGADARRLGC*LLAPPK Trigger: CTTCGGAGGGGCGAGAAGCCAGCATCCGAGCCGCCT...TGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | ATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACAGACCGCGAGCCGTGTaGGGGAGCAGCTGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: IQDTTHNPLPSPLARIQYRPRAV*GSSCPS Trigger: GCTGGGACAGCTGCTCCCGCACACGGCTCGCGGTCT...GTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR CCA 90 bp | CGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGCTGCGATATCACGTGCGTCAGGCTGCTaGTATTCCGGAGAGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: RQRECCMSISGADAAAISRASGC*YSGEAA Trigger: AGCCGCCTCTCCGGAATACCAGCAGCCTGACGCACG...TGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | GCCCAGGAGTTTGAGAATACAGTAAACTGTATCACACCACTACACTCCAGCCTGCACAGCGGGCGGCTCTaGAGAAGAGCTACGCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: AQEFENTVNCITPLHSSLHSGRL*RRATLR Trigger: ACGGAGCGTAGCTCTTCTGCAGAGCCGCCCGCTGTG...CAGGCTGGAGTGTAGTGGTGTGATACAGTTTACTGTATTCTCAAACTCCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | AGACCCTTCTTTGTTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCACGCGTGCGTCAGGCTaGTGGTATTCCGGAGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: RPFFVSHWPPKGMLYEHFTRASG*WYSGEA Trigger: CGCCTCTCCGGAATACCAGCAGCCTGACGCACGCGT...GAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAACAAAGAAGGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR TCA 90 bp | CATTTCAGGTGCAGATGCAGCTGCGATATCAGAAGACCCCGAGTCCTCTCTCTCACACTCCAGCCTGGGTaGGAGAACAAAACCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: HFRCRCSCDIRRPRVLSLTLQPG*ENKTLS Trigger: AGACAGGGTTTTGTTCTCTCACCCAGGCTGGAGTGT...GAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCTGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | AACATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAACACAGCGGGCGGCTCTaGAGAAGAGCTACGCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: NIQDTTHNPLPSPLARIQHSGRL*RRATLR Trigger: ACGGAGCGTAGCTCTTCTGCAGAGCCGCCCGCTGTG...TTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR CCA 90 bp | CAGGTGCAGATGCAGCTGCGATATCAGAAGACCCCGAGTCCTCTCTCTCCAGTTCACTACACTCCAGCCTaGGTGAGAGAACAAAACCCT | + |
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Preference number: 4 (lower is better) Translates to: QVQMQLRYQKTPSPLSPVHYTPA*VREQNP Trigger: AGGGTTTTGTTCTCTCACCCAGGCTGGAGTGTAGTG...AACTGGAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR TCA 90 bp | CGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGCTGCGATATCAGGCTTCTGTGATGAGTaGGGACACCTGGCTTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: RQRECCMSISGADAAAISGFCDE*GHLAFV Trigger: CACAAAAGCCAGGTGTCCTCACTCATCACAGAAGCC...TGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR TCA 90 bp | CTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACAAGACTGGCTTCTGTGATGAGTaGGGACACCTGGCTTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: LTTPYPHLWHEFNTRDKTGFCDE*GHLAFV Trigger: CACAAAAGCCAGGTGTCCTCACTCATCACAGAAGCC...AGTCTTGTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR TCA 90 bp | CGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGCTGCGATATCAGTAATGCTGTTTCTGTaGGTAACGGGAGCTAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: RQRECCMSISGADAAAISVMLFL*VTGAKA Trigger: CGCCTTAGCTCCCGTTACTCACAGAAACAGCATTAC...TGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | GACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGAGTGGTGAGGTCTGGATaGTTGAAAAAGGACGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: DTTHNPLPSPLARIQYTRVVRSG*LKKDAS Trigger: GGAGGCGTCCTTTTTCAAGCATCCAGACCTCACCAC...TCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR GCA 90 bp | ACAGACCCTTCTTTGTTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTAGGTGCAGATGCAGCTaGGATATCAGAAGACCCCGA | + |
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Preference number: 4 (lower is better) Translates to: TDPSLFLTGRQRECCMSIRCRCS*DIRRPR Trigger: TCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCT...AATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAACAAAGAAGGGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | TTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGGCCGCCAAAGGGAATaGTGTATGAGCATTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: FLTGRQRECCMSISGADAGRQRE*CMSISG Trigger: ACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCC...TGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR CCA 90 bp | ACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACGCCTGTGGTGAGGTCTaGATGCTTGAAAAAGGACGC | + |
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Preference number: 4 (lower is better) Translates to: TQLTTPYPHLWHEFNTRDACGEV*MLEKGR Trigger: GCGTCCTTTTTCAAGCATCCAGACCTCACCACAGGC...GTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR CCA 90 bp | TTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAACCCTTCAAAAGAGATaGGGAAGGCTGGGCACAGTA | + |
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Preference number: 4 (lower is better) Translates to: FLTGRQRECCMSISGADATLQKR*GRLGTV Trigger: TACTGTGCCCAGCCTTCCCCATCTCTTTTGAAGGGT...TGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR CCA 90 bp | CGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGCTGCGATATCAGCCTGTGGTGAGGTCTaGATGCAGAACCTTTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: RQRECCMSISGADAAAISACGEV*MQNLWN Trigger: ATTCCAAAGGTTCTGCATCCAGACCTCACCACAGGC...TGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| 3UTR CAA 72 bp | TGCGATATCAGAAGACCCCGAGTCCTCTCTCTCCAGTaGATGTCGCCATGTAGTGCAAGGGTAATGCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: CDIRRPRVLSLQ*MSPCSARVMLF Trigger: AAACAGCATTACCCTTGCACTACATGGCGACATCAACTGGAGAGAGAGGACTCGGGGTCTTCTGATATCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR TCA 90 bp | AACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACAAGAGACACCTGGCTTTTGTaGGCTGTGCTGAAGTACGTG | + |
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Preference number: 4 (lower is better) Translates to: NSQPLTLTFGTNSIHETRDTWLL*AVLKYV Trigger: CACGTACTTCAGCACAGCTCACAAAAGCCAGGTGTC...TCTTGTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR TCA 90 bp | CCTAAACATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATGTAATGCTGTTTCTGTaGGTAACGGGAGCTAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: PKHTGHNSQPLTLTFGTNVMLFL*VTGAKA Trigger: CGCCTTAGCTCCCGTTACTCACAGAAACAGCATTAC...ATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTATGTTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR TCA 90 bp | CTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACAAGACTTCCTCTCTCTCCAGTTaGTGTCGCCATGTAGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: LTTPYPHLWHEFNTRDKTSSLSS*CRHVVQ Trigger: TTGCACTACATGGCGACATCAACTGGAGAGAGAGGA...AGTCTTGTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR TCA 90 bp | GCCCAGGAGTTTGAGAATACAGTAAACTGTATCACACCACTACACTCCAGCCTGTCCTCTCTCTCCAGTTaGTGTCGCCATGTAGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: AQEFENTVNCITPLHSSLSSLSS*CRHVVQ Trigger: TTGCACTACATGGCGACATCAACTGGAGAGAGAGGA...CAGGCTGGAGTGTAGTGGTGTGATACAGTTTACTGTATTCTCAAACTCCTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | ATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACAGGTGCAGATGCAGCTaGGATATCAGAAGACCCCGA | + |
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Preference number: 4 (lower is better) Translates to: IQDTTHNPLPSPLARIQYRCRCS*DIRRPR Trigger: TCGGGGTCTTCTGATATCGCAGCTGCATCTGCACCT...GTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR GCA 90 bp | ACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACGGCCGCCAAAGGGAATaGTGTATGAGCATTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TQLTTPYPHLWHEFNTRDGRQRE*CMSISG Trigger: ACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCC...GTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR TCA 90 bp | ACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACGGACGCCTCCATCATTaGTTTAGAGAGGTGGATTGT | + |
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Preference number: 4 (lower is better) Translates to: TQLTTPYPHLWHEFNTRDGRLHH*FREVDC Trigger: ACAATCCACCTCTCTAAATCAATGATGGAGGCGTCC...GTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR TCA 90 bp | CTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACAAGACTTTTTGTGAGCTGTGCTaGAGTACGTGCATGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: LTTPYPHLWHEFNTRDKTFCELC*STCMYC Trigger: GCAGTACATGCACGTACTTCAGCACAGCTCACAAAA...AGTCTTGTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377673.10 |
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| CDS-3UTR TCA 90 bp | TTTGTTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATTTTGTGAGCTGTGCTaGAGTACGTGCATGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: FVSHWPPKGMLYEHFRCRFCELC*STCMYC Trigger: GCAGTACATGCACGTACTTCAGCACAGCTCACAAAA...TCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR GCA 90 bp | TTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCATATGAGCATTTCAGGTaGAGATGCAGCTGCGATATC | + |
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Preference number: 4 (lower is better) Translates to: FLTGRQRECCMSISGADAYEHFR*RCSCDI Trigger: GATATCGCAGCTGCATCTGCACCTGAAATGCTCATA...TGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
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| CDS-3UTR CCA 90 bp | CTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACAAGACTTTCTTTGTTTCTCACTaGCCGCCAAAGGGAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTTPYPHLWHEFNTRDKTFFVSH*PPKGML Trigger: CAGCATTCCCTTTGGCGGCCAGTGAGAAACAAAGAA...AGTCTTGTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGAGTTTGAGAATACAGTAAACTGTATCACACCACTACACTCCAGCCTGTTCTTTGTTTCTCACTaGCCGCCAAAGGGAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQEFENTVNCITPLHSSLFFVSH*PPKGML Trigger: CAGCATTCCCTTTGGCGGCCAGTGAGAAACAAAGAA...CAGGCTGGAGTGTAGTGGTGTGATACAGTTTACTGTATTCTCAAACTCCTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
||
| CDS-3UTR TCA 90 bp | ACAGACCCTTCTTTGTTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTAAAGGGAATGCTGTATaGGCATTTCAGGTGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TDPSLFLTGRQRECCMSIKGNAV*AFQVQM Trigger: CATCTGCACCTGAAATGCTCATACAGCATTCCCTTT...AATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAACAAAGAAGGGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
||
| CDS-3UTR GCA 90 bp | ACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACCATTTCAGGTGCAGATaGAGCTGCGATATCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQLTTPYPHLWHEFNTRDHFRCR*SCDIRR Trigger: TCTTCTGATATCGCAGCTGCATCTGCACCTGAAATG...GTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR GCA 90 bp | GCCCAGGAGTTTGAGAATACAGTAAACTGTATCACACCACTACACTCCAGCCTGCATTTCAGGTGCAGATaGAGCTGCGATATCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQEFENTVNCITPLHSSLHFRCR*SCDIRR Trigger: TCTTCTGATATCGCAGCTGCATCTGCACCTGAAATG...CAGGCTGGAGTGTAGTGGTGTGATACAGTTTACTGTATTCTCAAACTCCTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
||
| CDS-3UTR CCA 90 bp | ACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACCCTTACCCTCACCTTTaGCACGAATTCAATACACGA | + |
|
Preference number: 4 (lower is better) Translates to: TQLTTPYPHLWHEFNTRDPYPHL*HEFNTR Trigger: TCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGG...GTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGAGAGTACCTTGGCCAACATAGTGAGATGCTTTCTGTACAAACAATTTTTAGCCCTAGCTACTTaGGAGTCTGAGGCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGESTLANIVRCFLYKQFLALAT*ESEAGA Trigger: TGCTCCTGCCTCAGACTCCCAAGTAGCTAGGGCTAA...AAATTGTTTGTACAGAAAGCATCTCACTATGTTGGCCAAGGTACTCTCACCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548449.1 |
||
| CDS-3UTR TCA 90 bp | ATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACAAAGGGAATGCTGTATaGGCATTTCAGGTGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: IQDTTHNPLPSPLARIQYKGNAV*AFQVQM Trigger: CATCTGCACCTGAAATGCTCATACAGCATTCCCTTT...GTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR GCA 90 bp | TACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACATATGAGCATTTCAGGTaGAGATGCAGCTGCGATATC | + |
|
Preference number: 4 (lower is better) Translates to: YRTQLTTPYPHLWHEFNTYEHFR*RCSCDI Trigger: GATATCGCAGCTGCATCTGCACCTGAAATGCTCATA...TGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR TCA 90 bp | AGACCCTTCTTTGTTTCTCACTGGCCGCCAAAGGGAATGCTGTATGAGCATTTCTTGAGCCCAGGAGTTTaGGAATACAGTAAACTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RPFFVSHWPPKGMLYEHFLSPGV*EYSKLY Trigger: ATACAGTTTACTGTATTCTCAAACTCCTGGGCTCAA...GAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAACAAAGAAGGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGCTGCGATATCAGAAGTACGTGCATGTACTaGCTCTTCATTAACATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKGMLYEHFRCRCSCDIRSTCMY*LFINIF Trigger: GAAGATGTTAATGAAGAGGCAGTACATGCACGTACT...TCTGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
||
| CDS-3UTR GCA 90 bp | ATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACGTTTTCCATAACTCTTaGAGCTTAGCTATGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQDTTHNPLPSPLARIQYVFHNS*SLAMCE Trigger: CTCACACATAGCTAAGCTGCAAGAGTTATGGAAAAC...GTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR GCA 90 bp | ATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACAGTACGTGCATGTACTaGCTCTTCATTAACATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQDTTHNPLPSPLARIQYSTCMY*LFINIF Trigger: GAAGATGTTAATGAAGAGGCAGTACATGCACGTACT...GTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR GCA 90 bp | ACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACGAGACTCTGAAGAAACTGTTTaGATGAACAGTTTCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQLTTPYPHLWHEFNTRDSEETV*MNSFLG Trigger: ACCAAGGAAACTGTTCATGCAAACAGTTTCTTCAGA...GTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR TCA 90 bp | CTAAACATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCTTTGTATCCATCTTTaGTTCTATCAGAACCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNIQDTTHNPLPSPLARILCIHL*FYQNLW Trigger: CCAAAGGTTCTGATAGAATCAAAGATGGATACAAAG...AATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTATGTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR GCA 90 bp | GCCCAGGAGTTTGAGAATACAGTAAACTGTATCACACCACTACACTCCAGCCTGGCCAACATAGTGAGATaGTTTCTGTACAAACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: AQEFENTVNCITPLHSSLANIVR*FLYKQF Trigger: AAATTGTTTGTACAGAAAGCATCTCACTATGTTGGC...CAGGCTGGAGTGTAGTGGTGTGATACAGTTTACTGTATTCTCAAACTCCTGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
||
| CDS-3UTR CCA 90 bp | ATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACACTATCATTGGTACATaGAACTACATCAGACCAATT | + |
|
Preference number: 4 (lower is better) Translates to: IQDTTHNPLPSPLARIQYTIIGT*NYIRPI Trigger: AATTGGTCTGATGTAGTTCCATGTACCAATGATAGT...GTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGAGAGTACCTTGGCCAACATAGTGAGATGCTTTCTGTACAAACAATTTTGGATGCAGAACCTTTaGAATTCTGGTAACAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGESTLANIVRCFLYKQFWMQNL*NSGNKS Trigger: ACTCTTGTTACCAGAATTCCAAAGGTTCTGCATCCA...AAATTGTTTGTACAGAAAGCATCTCACTATGTTGGCCAAGGTACTCTCACCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548449.1 |
||
| CDS GCA 90 bp | GGACCCTGGCCGGGCATCTCCGCGGCGCCGAGACCGCGAGCCGTGTaGGGGAGCAGCTGTCCCAGCATCCCTCCCCCGACAGCACGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPWPGISAAPRPRAV*GSSCPSIPPPTARV Trigger: CACGCGTGCTGTCGGGGGAGGGATGCTGGGACAGCTGCTCCCGCACACGGCTCGCGGTCTCGGCGCCGCGGAGATGCCCGGCCAGGGTCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000377673.10 ENST00000538285.6 ENST00000548449.1 |
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| CDS CCA 90 bp | GGCTCTGCAGAAGAGCTACGCTCCGTCCAGTCGGACCCCGGACCCTaGCCGGGCATCTCCGCGGCGCCGAGACCGCGAGCCGTGTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSAEELRSVQSDPGP*PGISAAPRPRAVCG Trigger: CCCGCACACGGCTCGCGGTCTCGGCGCCGCGGAGATGCCCGGCCAGGGTCCGGGGTCCGACTGGACGGAGCGTAGCTCTTCTGCAGAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377673.10 ENST00000538285.6 ENST00000548449.1 |
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| CDS GCA 90 bp | CGGCTCGGATGCTGGCTTCTCGCCCCTCCGAAGCCGTTCGGACACTaGCCGAACAGCTTCGGGAGAGCGGGGCGGGCAGATCCGCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: RLGCWLLAPPKPFGH*PNSFGRAGRADPRP Trigger: GGGTCGCGGATCTGCCCGCCCCGCTCTCCCGAAGCTGTTCGGGCAGTGTCCGAACGGCTTCGGAGGGGCGAGAAGCCAGCATCCGAGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538285.6 |
||
| CDS GCA 90 bp | CAGCTGTCCCAGCATCCCTCCCCCGACAGCACGCGTGCGTCAGGCTaGTGGTATTCCGGAGAGGCGGCTCGGATGCTGGCTTCTCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QLSQHPSPDSTRASG*WYSGEAARMLASRP Trigger: GGGGCGAGAAGCCAGCATCCGAGCCGCCTCTCCGGAATACCAGCAGCCTGACGCACGCGTGCTGTCGGGGGAGGGATGCTGGGACAGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538285.6 ENST00000548449.1 |
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| CDS GCA 90 bp | TGTGCGGGAGCAGCTGTCCCAGCATCCCTCCCCCGACAGCACGCGTaGGTCAGGCTGCTGGTATTCCGGAGAGGCGGCTCGGATGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CAGAAVPASLPRQHA*VRLLVFRRGGSDAG Trigger: GCCAGCATCCGAGCCGCCTCTCCGGAATACCAGCAGCCTGACGCACGCGTGCTGTCGGGGGAGGGATGCTGGGACAGCTGCTCCCGCACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538285.6 ENST00000548449.1 |
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| CDS CCA 90 bp | CTGTCCCAGCATCCCTCCCCCGACAGCACGCGTGCGTCAGGCTGCTaGTATTCCGGAGAGGCGGCTCGGATGCTGGCTTCTCGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSQHPSPDSTRASGC*YSGEAARMLASRPS Trigger: GGAGGGGCGAGAAGCCAGCATCCGAGCCGCCTCTCCGGAATACCAGCAGCCTGACGCACGCGTGCTGTCGGGGGAGGGATGCTGGGACAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538285.6 ENST00000548449.1 |
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| CDS GCA 90 bp | GCACGCGTGCGTCAGGCTGCTGGTATTCCGGAGAGGCGGCTCGGATaGTGGCTTCTCGCCCCTCCGAAGCCGTTCGGACACTGCCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ARVRQAAGIPERRLG*WLLAPPKPFGHCPN Trigger: GTTCGGGCAGTGTCCGAACGGCTTCGGAGGGGCGAGAAGCCAGCATCCGAGCCGCCTCTCCGGAATACCAGCAGCCTGACGCACGCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS CCA 90 bp | CGCGTGCGTCAGGCTGCTGGTATTCCGGAGAGGCGGCTCGGATGCTaGCTTCTCGCCCCTCCGAAGCCGTTCGGACACTGCCCGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVRQAAGIPERRLGC*LLAPPKPFGHCPNS Trigger: GCTGTTCGGGCAGTGTCCGAACGGCTTCGGAGGGGCGAGAAGCCAGCATCCGAGCCGCCTCTCCGGAATACCAGCAGCCTGACGCACGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS GCA 90 bp | AGTTACGGTGGGGGAGGGGCAGGAGCGCTGCGGTCGCTGAGCGTTTaGACGTTTGCACCTCTCTGTGGAAGCAGTGCGTCACAGGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SYGGGGAGALRSLSV*TFAPLCGSSASQEG Trigger: TCCCTCCTGTGACGCACTGCTTCCACAGAGAGGTGCAAACGTGCAAACGCTCAGCGACCGCAGCGCTCCTGCCCCTCCCCCACCGTAACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS GCA 90 bp | TGGGGGAGGGGCAGGAGCGCTGCGGTCGCTGAGCGTTTGCACGTTTaGACCTCTCTGTGGAAGCAGTGCGTCACAGGAGGGAAATATACA | + |
|
Preference number: 5 (lower is better) Translates to: WGRGRSAAVAERLHV*TSLWKQCVTGGKYT Trigger: TGTATATTTCCCTCCTGTGACGCACTGCTTCCACAGAGAGGTGCAAACGTGCAAACGCTCAGCGACCGCAGCGCTCCTGCCCCTCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS GCA 90 bp | CAGCACATTTGCAAATCGCGAGGGTCACCATACAGGTCAAACGTCTaGACGCAAACCACGGACCGAAGCACGTGGCGCAAGGATGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QHICKSRGSPYRSNV*TQTTDRSTWRKDAE Trigger: CTCCGCATCCTTGCGCCACGTGCTTCGGTCCGTGGTTTGCGTGCAGACGTTTGACCTGTATGGTGACCCTCGCGATTTGCAAATGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS CCA 90 bp | AGGAGCGCTGCGGTCGCTGAGCGTTTGCACGTTTGCACCTCTCTGTaGAAGCAGTGCGTCACAGGAGGGAAATATACATGCTCCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSAAVAERLHVCTSL*KQCVTGGKYTCSPK Trigger: TTTTGGGGAGCATGTATATTTCCCTCCTGTGACGCACTGCTTCCACAGAGAGGTGCAAACGTGCAAACGCTCAGCGACCGCAGCGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS GCA 90 bp | GCGGTCGCTGAGCGTTTGCACGTTTGCACCTCTCTGTGGAAGCAGTaGGTCACAGGAGGGAAATATACATGCTCCCCAAAACAAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AVAERLHVCTSLWKQ*VTGGKYTCSPKQEV Trigger: CACCTCTTGTTTTGGGGAGCATGTATATTTCCCTCCTGTGACGCACTGCTTCCACAGAGAGGTGCAAACGTGCAAACGCTCAGCGACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS CCA 90 bp | CCATACAGGTCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTaGCGCAAGGATGCGGAGCTTTATCTGTTGTCCGTTATTACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PYRSNVCTQTTDRST*RKDAELYLLSVITQ Trigger: CTGAGTAATAACGGACAACAGATAAAGCTCCGCATCCTTGCGCCACGTGCTTCGGTCCGTGGTTTGCGTGCAGACGTTTGACCTGTATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538285.6 |
||
| CDS GCA 90 bp | AAACGTCTGCACGCAAACCACGGACCGAAGCACGTGGCGCAAGGATaGGGAGCTTTATCTGTTGTCCGTTATTACTCAGGTATCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRLHANHGPKHVAQG*GALSVVRYYSGIQA Trigger: AGCTTGGATACCTGAGTAATAACGGACAACAGATAAAGCTCCGCATCCTTGCGCCACGTGCTTCGGTCCGTGGTTTGCGTGCAGACGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS GCA 90 bp | ACAAGAGGTGCCTTCCACTTCAGTATTCCAGATCCTCAGCACATTTaGAAATCGCGAGGGTCACCATACAGGTCAAACGTCTGCACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TRGAFHFSIPDPQHI*KSRGSPYRSNVCTQ Trigger: TTGCGTGCAGACGTTTGACCTGTATGGTGACCCTCGCGATTTGCAAATGTGCTGAGGATCTGGAATACTGAAGTGGAAGGCACCTCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538285.6 |
||
| CDS GCA 90 bp | TGCACCTCTCTGTGGAAGCAGTGCGTCACAGGAGGGAAATATACATaGTCCCCAAAACAAGAGGTGCCTTCCACTTCAGTATTCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: CTSLWKQCVTGGKYT*SPKQEVPSTSVFQI Trigger: GATCTGGAATACTGAAGTGGAAGGCACCTCTTGTTTTGGGGAGCATGTATATTTCCCTCCTGTGACGCACTGCTTCCACAGAGAGGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538285.6 |
||
| CDS-3UTR CAA 90 bp | CCAAAGGGAATGCTGTATGAGCATTTCAGGTGCAGATGCAGCTGCGATATCAGAGTCCTCTCTCTCCAGTaGATGTCGCCATGTAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PKGMLYEHFRCRCSCDIRVLSLQ*MSPCSA Trigger: TGCACTACATGGCGACATCAACTGGAGAGAGAGGAC...TCTGATATCGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548449.1 |
||
| CDS-3UTR CAA 90 bp | ATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACGTGAGGTCTGGATGCTaGAAAAAGGACGCCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: IQDTTHNPLPSPLARIQYVRSGC*KKDASI Trigger: GATGGAGGCGTCCTTTTTCAAGCATCCAGACCTCAC...GTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR CAA 90 bp | TACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACAGTCCTCTCTCTCCAGTaGATGTCGCCATGTAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YRTQLTTPYPHLWHEFNTVLSLQ*MSPCSA Trigger: TGCACTACATGGCGACATCAACTGGAGAGAGAGGAC...TGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS-3UTR CAA 90 bp | ATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTCAATACCCCTTACCCTCACCTTaGGCACGAATTCAATACACG | + |
|
Preference number: 5 (lower is better) Translates to: IQDTTHNPLPSPLARIQYPLPSP*ARIQYT Trigger: CGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGG...GTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS GCA 90 bp | AGTGCGTCACAGGAGGGAAATATACATGCTCCCCAAAACAAGAGGTaGCTTCCACTTCAGTATTCCAGATCCTCAGCACATTTGCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SASQEGNIHAPQNKR*LPLQYSRSSAHLQI Trigger: GATTTGCAAATGTGCTGAGGATCTGGAATACTGAAGTGGAAGGCACCTCTTGTTTTGGGGAGCATGTATATTTCCCTCCTGTGACGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538285.6 |
||
| CDS-3UTR CAA 90 bp | CTAAACATACAGGACACAACTCACAACCCCTTACCCTCACCTTTGGCACGAATTGTTTTTATCCCTTCTTaGTTTCTCACTGGCCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LNIQDTTHNPLPSPLARIVFIPS*FLTGRQ Trigger: TTGGCGGCCAGTGAGAAACAAAGAAGGGATAAAAAC...AATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTATGTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377673.10 |
||
| CDS CCA 90 bp | ATGCATATCCAGTTTTTATCCTATAAGAAAGGGAAGTATCTTAGTTaGAGCCAGCAAAGTGAACAGCTGCCTAGGGCATGTGGAAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: MHIQFLSYKKGKYLS*SQQSEQLPRACGRP Trigger: TGGTCTTCCACATGCCCTAGGCAGCTGTTCACTTTGCTGGCTCCAACTAAGATACTTCCCTTTCTTATAGGATAAAAACTGGATATGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547539.1 |
||
| CDS GCA 90 bp | ACCCTGACATGTAAAGCTGCTGCAGTGCAATTTCAATACTCATGCTaGTTAATCTTTTTCCTCTCCCTGTTATATAGTATTCCCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TLTCKAAAVQFQYSC*LIFFLSLLYSIPLC Trigger: GCACAGGGGAATACTATATAACAGGGAGAGGAAAAAGATTAAGCAGCATGAGTATTGAAATTGCACTGCAGCAGCTTTACATGTCAGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547539.1 |
||
| CDS GCA 72 bp | GCCGCCACCCTCGGTCCCGGCCACAGCGGGCGGCTCTaGAGAAGAGCTACGCTCCGTCCAGTCGGACCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AATLGPGHSGRL*RRATLRPVGPR Trigger: CCGGGGTCCGACTGGACGGAGCGTAGCTCTTCTGCAGAGCCGCCCGCTGTGGCCGGGACCGAGGGTGGCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377673.10 ENST00000538285.6 ENST00000548449.1 |
||
| CDS GCA 72 bp | GCAGCTGTCCCAGCATCCCTCCCCCGACAGCACGCGTaGGTCAGGCTGCTGGTATTCCGGAGAGGCGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AAVPASLPRQHA*VRLLVFRRGGS Trigger: CGAGCCGCCTCTCCGGAATACCAGCAGCCTGACGCACGCGTGCTGTCGGGGGAGGGATGCTGGGACAGCTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538285.6 ENST00000548449.1 |
||
| CDS GCA 72 bp | TGCTGGCTTCTCGCCCCTCCGAAGCCGTTCGGACACTaGCCGAACAGCTTCGGGAGAGCGGGGCGGGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: CWLLAPPKPFGH*PNSFGRAGRAD Trigger: ATCTGCCCGCCCCGCTCTCCCGAAGCTGTTCGGGCAGTGTCCGAACGGCTTCGGAGGGGCGAGAAGCCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538285.6 |
||
| CDS GCA 72 bp | CAGCATCCCTCCCCCGACAGCACGCGTGCGTCAGGCTaGTGGTATTCCGGAGAGGCGGCTCGGATGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: QHPSPDSTRASG*WYSGEAARMLA Trigger: AGCCAGCATCCGAGCCGCCTCTCCGGAATACCAGCAGCCTGACGCACGCGTGCTGTCGGGGGAGGGATGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538285.6 ENST00000548449.1 |
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| CDS GCA 72 bp | CGTCAGGCTGCTGGTATTCCGGAGAGGCGGCTCGGATaGTGGCTTCTCGCCCCTCCGAAGCCGTTCGGACAC | + |
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Preference number: 6 (lower is better) Translates to: RQAAGIPERRLG*WLLAPPKPFGH Trigger: GTGTCCGAACGGCTTCGGAGGGGCGAGAAGCCAGCATCCGAGCCGCCTCTCCGGAATACCAGCAGCCTGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538285.6 ENST00000548449.1 |
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| CDS CCA 72 bp | CATCCCTCCCCCGACAGCACGCGTGCGTCAGGCTGCTaGTATTCCGGAGAGGCGGCTCGGATGCTGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: HPSPDSTRASGC*YSGEAARMLAS Trigger: AGAAGCCAGCATCCGAGCCGCCTCTCCGGAATACCAGCAGCCTGACGCACGCGTGCTGTCGGGGGAGGGATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538285.6 ENST00000548449.1 |
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| CDS GCA 72 bp | GGGGGAGGGGCAGGAGCGCTGCGGTCGCTGAGCGTTTaGACGTTTGCACCTCTCTGTGGAAGCAGTGCGTCA | + |
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Preference number: 6 (lower is better) Translates to: GGGAGALRSLSV*TFAPLCGSSAS Trigger: TGACGCACTGCTTCCACAGAGAGGTGCAAACGTGCAAACGCTCAGCGACCGCAGCGCTCCTGCCCCTCCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS CAA 72 bp | TGGGGGAGGGGCAGGAGCGCTGCGGTCGCTGAGCGTTaGCACGTTTGCACCTCTCTGTGGAAGCAGTGCGTC | + |
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Preference number: 6 (lower is better) Translates to: WGRGRSAAVAER*HVCTSLWKQCV Trigger: GACGCACTGCTTCCACAGAGAGGTGCAAACGTGCAAACGCTCAGCGACCGCAGCGCTCCTGCCCCTCCCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS CAA 90 bp | GAGTTACGGTGGGGGAGGGGCAGGAGCGCTGCGGTCGCTGAGCGTTaGCACGTTTGCACCTCTCTGTGGAAGCAGTGCGTCACAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: ELRWGRGRSAAVAER*HVCTSLWKQCVTGG Trigger: CCCTCCTGTGACGCACTGCTTCCACAGAGAGGTGCAAACGTGCAAACGCTCAGCGACCGCAGCGCTCCTGCCCCTCCCCCACCGTAACTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS GCA 72 bp | GGCAGGAGCGCTGCGGTCGCTGAGCGTTTGCACGTTTaGACCTCTCTGTGGAAGCAGTGCGTCACAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: GRSAAVAERLHV*TSLWKQCVTGG Trigger: CCCTCCTGTGACGCACTGCTTCCACAGAGAGGTGCAAACGTGCAAACGCTCAGCGACCGCAGCGCTCCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS GCA 72 bp | TGCAAATCGCGAGGGTCACCATACAGGTCAAACGTCTaGACGCAAACCACGGACCGAAGCACGTGGCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: CKSRGSPYRSNV*TQTTDRSTWRK Trigger: CTTGCGCCACGTGCTTCGGTCCGTGGTTTGCGTGCAGACGTTTGACCTGTATGGTGACCCTCGCGATTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS CCA 72 bp | TCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTaGCGCAAGGATGCGGAGCTTTATCTGTTGTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: SNVCTQTTDRST*RKDAELYLLSV Trigger: AACGGACAACAGATAAAGCTCCGCATCCTTGCGCCACGTGCTTCGGTCCGTGGTTTGCGTGCAGACGTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS CAA 90 bp | ACCACGGACCGAAGCACGTGGCGCAAGGATGCGGAGCTTTATCTGTaGTCCGTTATTACTCAGGTATCCAAGCTTAGACAGCATCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: TTDRSTWRKDAELYL*SVITQVSKLRQHPN Trigger: GTTGGGATGCTGTCTAAGCTTGGATACCTGAGTAATAACGGACAACAGATAAAGCTCCGCATCCTTGCGCCACGTGCTTCGGTCCGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS CAA 90 bp | CCAGCTGATCGAAGCACGTGGCGCAAGGATGCGGAGCTTTATCTGTaGTCCGTTATTACTCAGGTATCCAAGCTTAGACAGCATCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: PADRSTWRKDAELYL*SVITQVSKLRQHPN Trigger: GTTGGGATGCTGTCTAAGCTTGGATACCTGAGTAATAACGGACAACAGATAAAGCTCCGCATCCTTGCGCCACGTGCTTCGATCAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548869.1 |
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| CDS GCA 72 bp | ATCCCTTCTTTGTTTCTCACTGGCCGCCAAAGGGAATaGTGTATGAGCATTTCAGGTGCAGATGCAGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: IPSLFLTGRQRE*CMSISGADAAA Trigger: CGCAGCTGCATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAACAAAGAAGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377673.10 ENST00000546396.1 |
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| CDS CAA 90 bp | AACAAGAGGTGCCTTCCACTTCAGTATTCCAGATCCTCAGCACATTaGCAAATCGCGAGGGTCACCATACAGGTCAAACGTCTGCACGCA | + |
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Preference number: 6 (lower is better) Translates to: NKRCLPLQYSRSSAH*QIARVTIQVKRLHA Trigger: TGCGTGCAGACGTTTGACCTGTATGGTGACCCTCGCGATTTGCAAATGTGCTGAGGATCTGGAATACTGAAGTGGAAGGCACCTCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS CAA 72 bp | CGAAGCACGTGGCGCAAGGATGCGGAGCTTTATCTGTaGTCCGTTATTACTCAGGTATCCAAGCTTAGACAG | + |
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Preference number: 6 (lower is better) Translates to: RSTWRKDAELYL*SVITQVSKLRQ Trigger: CTGTCTAAGCTTGGATACCTGAGTAATAACGGACAACAGATAAAGCTCCGCATCCTTGCGCCACGTGCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538285.6 ENST00000548869.1 |
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| CDS CAA 72 bp | TGCCTTCCACTTCAGTATTCCAGATCCTCAGCACATTaGCAAATCGCGAGGGTCACCATACAGGTCAAACGT | + |
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Preference number: 6 (lower is better) Translates to: CLPLQYSRSSAH*QIARVTIQVKR Trigger: ACGTTTGACCTGTATGGTGACCCTCGCGATTTGCAAATGTGCTGAGGATCTGGAATACTGAAGTGGAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538285.6 |
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| CDS CCA 72 bp | TACAGGACACAACTCACAACCCCTTACCCTCACCTTTaGCACGAATTCAATACACGAGACAAGACTGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: YRTQLTTPYPHL*HEFNTRDKTVK Trigger: CTTGACAGTCTTGTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377673.10 ENST00000546396.1 ENST00000547539.1 |
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| CDS GCA 72 bp | GGAAGTATCTTAGTTGGAGCCAGCAAAGTGAACAGCTaGCTAGGGCATGTGGAAGACCACACAAATTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GSILVGASKVNS*LGHVEDHTNLF Trigger: AAACAAATTTGTGTGGTCTTCCACATGCCCTAGGCAGCTGTTCACTTTGCTGGCTCCAACTAAGATACTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547539.1 |
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| CDS CAA 72 bp | ATACAGGACACAACTCACAACCCCTTACCCTCACCTTaGGCACGAATTCAATACACGAGACAAGACTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: IQDTTHNPLPSP*ARIQYTRQDCQ Trigger: TTGACAGTCTTGTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377673.10 ENST00000546396.1 ENST00000547539.1 |
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| CDS CCA 72 bp | TGCATATCCAGTTTTTATCCCTTCTTTGTTTCTCACTaGCCGCCAAAGGGAATGCTGTATGAGCATTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: CISSFYPFFVSH*PPKGMLYEHFR Trigger: CCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAACAAAGAAGGGATAAAAACTGGATATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377673.10 ENST00000546396.1 |
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| CDS CAA 90 bp | ATCCTAAACATACAGGACACAACTCACAACCCCTTACCCTCACCTTaGGCACGAATTCAATACACGAGACAAGACTGTCAAGTTAACATC | + |
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Preference number: 6 (lower is better) Translates to: ILNIQDTTHNPLPSP*ARIQYTRQDCQVNI Trigger: GATGTTAACTTGACAGTCTTGTCTCGTGTATTGAATTCGTGCCAAAGGTGAGGGTAAGGGGTTGTGAGTTGTGTCCTGTATGTTTAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377673.10 ENST00000546396.1 ENST00000547539.1 |
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| CDS CCA 72 bp | CAGTTTTTATCCTATAAGAAAGGGAAGTATCTTAGTTaGAGCCAGCAAAGTGAACAGCTGCCTAGGGCATGT | + |
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Preference number: 6 (lower is better) Translates to: QFLSYKKGKYLS*SQQSEQLPRAC Trigger: ACATGCCCTAGGCAGCTGTTCACTTTGCTGGCTCCAACTAAGATACTTCCCTTTCTTATAGGATAAAAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547539.1 |
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| CDS GCA 72 bp | TGTAAAGCTGCTGCAGTGCAATTTCAATACTCATGCTaGTTAATCTTTTTCCTCTCCCTGTTATATAGTATT | + |
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Preference number: 6 (lower is better) Translates to: CKAAAVQFQYSC*LIFFLSLLYSI Trigger: AATACTATATAACAGGGAGAGGAAAAAGATTAAGCAGCATGAGTATTGAAATTGCACTGCAGCAGCTTTACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547539.1 |
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