RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM215B (Homo sapiens)

Ensembl gene IDs: ENSG00000232300

Ensembl transcript IDs: ENST00000458392.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGGAGCGCACGGGGCCCGCGGAACCACCTAAGGCGACTTCAGACGTaGGCTCGGAACTGGCAGCCTTTCGTTTCTGCTTCATTCCAAGGC +
Preference number: 5 (lower is better)
Translates to: GSARGPRNHLRRLQT*ARNWQPFVSASFQG
Trigger: GCCTTGGAATGAAGCAGAAACGAAAGGCTGCCAGTTCCGAGCCCACGTCTGAAGTCGCCTTAGGTGGTTCCGCGGGCCCCGTGCGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458392.1
CDS CCA 90 bp GGCCCGCGGAACCACCTAAGGCGACTTCAGACGTGGGCTCGGAACTaGCAGCCTTTCGTTTCTGCTTCATTCCAAGGCCAGAGCAAGCCA +
Preference number: 5 (lower is better)
Translates to: GPRNHLRRLQTWARN*QPFVSASFQGQSKP
Trigger: TGGCTTGCTCTGGCCTTGGAATGAAGCAGAAACGAAAGGCTGCCAGTTCCGAGCCCACGTCTGAAGTCGCCTTAGGTGGTTCCGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458392.1
CDS CCA 90 bp GCAGCCTTTCGTTTCTGCTTCATTCCAAGGCCAGAGCAAGCCACGTaGGCAAACCCAAAGCCAGGGGACAGGAAAGTATCCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: AAFRFCFIPRPEQAT*ANPKPGDRKVSSTH
Trigger: GTGGGTGGAGGATACTTTCCTGTCCCCTGGCTTTGGGTTTGCCCACGTGGCTTGCTCTGGCCTTGGAATGAAGCAGAAACGAAAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458392.1
CDS CCA 72 bp CGTTTCTGCTTCATTCCAAGGCCAGAGCAAGCCACGTaGGCAAACCCAAAGCCAGGGGACAGGAAAGTATCC +
Preference number: 6 (lower is better)
Translates to: RFCFIPRPEQAT*ANPKPGDRKVS
Trigger: GGATACTTTCCTGTCCCCTGGCTTTGGGTTTGCCCACGTGGCTTGCTCTGGCCTTGGAATGAAGCAGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458392.1
CDS CCA 72 bp AACCACCTAAGGCGACTTCAGACGTGGGCTCGGAACTaGCAGCCTTTCGTTTCTGCTTCATTCCAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: NHLRRLQTWARN*QPFVSASFQGQ
Trigger: CTGGCCTTGGAATGAAGCAGAAACGAAAGGCTGCCAGTTCCGAGCCCACGTCTGAAGTCGCCTTAGGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458392.1
CDS TCA 72 bp CTGTTGCTATCTCTCTGCTCTTATGAGCTCACAGGGTaGCAAAGTGAATTAGTAAGTAGCAGGAGAACATTA +
Preference number: 6 (lower is better)
Translates to: LLLSLCSYELTG*QSELVSSRRTL
Trigger: TAATGTTCTCCTGCTACTTACTAATTCACTTTGTCACCCTGTGAGCTCATAAGAGCAGAGAGATAGCAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458392.1