RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM214A (Homo sapiens)

Ensembl gene IDs: ENSG00000047346

Ensembl transcript IDs: ENST00000261844.11, ENST00000399202.8, ENST00000534964.6, ENST00000546305.6, ENST00000561490.5, ENST00000561543.5, ENST00000562135.5, ENST00000562351.2, ENST00000566768.5, ENST00000566948.5, ENST00000568863.1, ENST00000570204.1, ENST00000619572.5

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACTTCAACTGGAAGAGTCAAATGTGTGGGGCAGAAAGCACCACTTaGCCCTACCTCGGCAGTAAAACCATCAACAATGCCGAGAGGATC +
Preference number: 1 (lower is better)
Translates to: HFNWKSQMCGAESTT*PYLGSKTINNAERI
Trigger: GATCCTCTCGGCATTGTTGATGGTTTTACTGCCGAGGTAGGGGCAAGTGGTGCTTTCTGCCCCACACATTTGACTCTTCCAGTTGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570204.1
3UTR TCA 90 bp AGTGTAAGATTTGAGTTCATATGCAGCACCGCTATCAACCTCCATTaGCTTTCTAGAGAACAGGAGCCGTACGTCTCTATGGAGGTAGAT +
Preference number: 1 (lower is better)
Translates to: SVRFEFICSTAINLH*LSREQEPYVSMEVD
Trigger: ATCTACCTCCATAGAGACGTACGGCTCCTGTTCTCTAGAAAGTCAATGGAGGTTGATAGCGGTGCTGCATATGAACTCAAATCTTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
3UTR CCA 90 bp AGCCAAAATTCATATACATCACAGGCTGCCACCACTCAATTCTACTaGCCCTCTTTTACTAGAGGTGACACTACTTCTAAAGACACAGAT +
Preference number: 1 (lower is better)
Translates to: SQNSYTSQAATTQFY*PSFTRGDTTSKDTD
Trigger: ATCTGTGTCTTTAGAAGTAGTGTCACCTCTAGTAAAAGAGGGCCAGTAGAATTGAGTGGTGGCAGCCTGTGATGTATATGAATTTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562351.2
3UTR GCA 90 bp ACAAACTTCGGAGAGAACATACTCATTGACTGTGTGTTTAGTAAGTaGCTGGCACAACCACTTCACTCAGATTATGTCATTCTAATAAAG +
Preference number: 1 (lower is better)
Translates to: TNFGENILIDCVFSK*LAQPLHSDYVILIK
Trigger: CTTTATTAGAATGACATAATCTGAGTGAAGTGGTTGTGCCAGGCACTTACTAAACACACAGTCAATGAGTATGTTCTCTCCGAAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
3UTR GCA 90 bp GAGATTCCTAGCAATCATATTTGCTGCAATGATTACCCACTGACTTaGATTCATTATAACAAGGTACAAATAAACCAAATGGCCAAACAG +
Preference number: 1 (lower is better)
Translates to: EIPSNHICCNDYPLT*IHYNKVQINQMAKQ
Trigger: CTGTTTGGCCATTTGGTTTATTTGTACCTTGTTATAATGAATGCAAGTCAGTGGGTAATCATTGCAGCAAATATGATTGCTAGGAATCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
3UTR-3UTR TCA 90 bp AACTTCGGAGAGAACATACTCATTGACTGTGTGTTTAGTAAGTGCCTGGCACAAACTGAGTGCCTCAATTaGAGCTCGCACTTAATGGGA +
Preference number: 2 (lower is better)
Translates to: NFGENILIDCVFSKCLAQTECLN*SSHLMG
Trigger: TCCCATTAAGTGCGAGCTTCAATTGAGGCACTCAGT...TTGTGCCAGGCACTTACTAAACACACAGTCAATGAGTATGTTCTCTCCGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
3UTR-3UTR GCA 90 bp TCATTGACTGTGTGTTTAGTAAGTGCCTGGCACAACCACTTCACTCAGATTATGATATACATCACAGGCTaGCACCACTCAATTCTACTG +
Preference number: 2 (lower is better)
Translates to: SLTVCLVSAWHNHFTQIMIYITG*HHSILL
Trigger: CAGTAGAATTGAGTGGTGGCAGCCTGTGATGTATAT...CATAATCTGAGTGAAGTGGTTGTGCCAGGCACTTACTAAACACACAGTCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
3UTR-3UTR CCA 90 bp AACTTCGGAGAGAACATACTCATTGACTGTGTGTTTAGTAAGTGCCTGGCACAAACCACTCAATTCTACTaGCCCTCTTTTACTAGAGGT +
Preference number: 2 (lower is better)
Translates to: NFGENILIDCVFSKCLAQTTQFY*PSFTRG
Trigger: ACCTCTAGTAAAAGAGGGCCAGTAGAATTGAGTGGT...TTGTGCCAGGCACTTACTAAACACACAGTCAATGAGTATGTTCTCTCCGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
3UTR-3UTR TCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAATTCAGTGTAAGATTTaGGTTCATATGCAGCACCGC +
Preference number: 2 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIIQCKI*VHMQHR
Trigger: GCGGTGCTGCATATGAACTCAAATCTTACACTGAAT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
3UTR-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATGGGGGTTTTGCTATTaGAACATGTCCAATGAAGTG +
Preference number: 2 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIWGFCY*NMSNEV
Trigger: CACTTCATTGGACATGTTGCAATAGCAAAACCCCCA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
3UTR-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAAGATTTGAGTTCATATaGAGCACCGCTATCAACCTC +
Preference number: 2 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIRFEFI*STAINL
Trigger: GAGGTTGATAGCGGTGCTGCATATGAACTCAAATCT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
3UTR-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGCTATCAACCTCCATTaGCTTTCTAGAGAACAGGAG +
Preference number: 2 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEAINLH*LSREQE
Trigger: CTCCTGTTCTCTAGAAAGTCAATGGAGGTTGATAGC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
3UTR-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACAGCTTAGTCCACATTaGACTGCTAATACAATATGT +
Preference number: 2 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIQLSPH*TANTIC
Trigger: ACATATTGTATTAGCAGTGCAATGTGGACTAAGCTG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
3UTR-3UTR CCA 90 bp ACAGTTGTATGTGTATTTAGCCAATCTTGTGTAGGTGTAAGGAGACTCAATCATATAGGGATGTTGTCATaGGGGAGCAATGTGAAATGT +
Preference number: 2 (lower is better)
Translates to: TVVCVFSQSCVGVRRLNHIGMLS*GSNVKC
Trigger: ACATTTCACATTGCTCCCCCATGACAACATCCCTAT...ATGATTGAGTCTCCTTACACCTACACAAGATTGGCTAAATACACATACAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
3UTR-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGAGAATCCACTCTCCTaGTTGTTAATTTGGTACACT +
Preference number: 2 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEENPLS*LLIWYT
Trigger: AGTGTACCAAATTAACAATCAGGAGAGTGGATTCTC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
3UTR-3UTR TCA 90 bp ACAGTTGTATGTGTATTTAGCCAATCTTGTGTAGGTGTAAGGAGACTCAATCATTGCTTCCAAGTGATATaGCTAAACTCTTTTGGCTAC +
Preference number: 2 (lower is better)
Translates to: TVVCVFSQSCVGVRRLNHCFQVI*LNSFGY
Trigger: GTAGCCAAAAGAGTTTAGTCATATCACTTGGAAGCA...ATGATTGAGTCTCCTTACACCTACACAAGATTGGCTAAATACACATACAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
3UTR-3UTR CCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAGGAATGTCTGATGATTaGCTGGCATATCTCGTAAAT +
Preference number: 2 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTGMSDD*LAYLVN
Trigger: ATTTACGAGATATGCCAGCCAATCATCAGACATTCC...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
3UTR GCA 72 bp TGGAAGAGTCAAATGTGTGGGGCAGAAAGCACCACTTaGCCCTACCTCGGCAGTAAAACCATCAACAATGCC +
Preference number: 3 (lower is better)
Translates to: WKSQMCGAESTT*PYLGSKTINNA
Trigger: GGCATTGTTGATGGTTTTACTGCCGAGGTAGGGGCAAGTGGTGCTTTCTGCCCCACACATTTGACTCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570204.1
3UTR TCA 72 bp TTTGAGTTCATATGCAGCACCGCTATCAACCTCCATTaGCTTTCTAGAGAACAGGAGCCGTACGTCTCTATG +
Preference number: 3 (lower is better)
Translates to: FEFICSTAINLH*LSREQEPYVSM
Trigger: CATAGAGACGTACGGCTCCTGTTCTCTAGAAAGTCAATGGAGGTTGATAGCGGTGCTGCATATGAACTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
3UTR CCA 72 bp TCATATACATCACAGGCTGCCACCACTCAATTCTACTaGCCCTCTTTTACTAGAGGTGACACTACTTCTAAA +
Preference number: 3 (lower is better)
Translates to: SYTSQAATTQFY*PSFTRGDTTSK
Trigger: TTTAGAAGTAGTGTCACCTCTAGTAAAAGAGGGCCAGTAGAATTGAGTGGTGGCAGCCTGTGATGTATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
3UTR-3UTR CAA 90 bp AACTTCGGAGAGAACATACTCATTGACTGTGTGTTTAGTAAGTGCCTGGCACAAAGATTGGTAAATAACTaGTTTTTGGGCAGGGGTCGA +
Preference number: 3 (lower is better)
Translates to: NFGENILIDCVFSKCLAQRLVNN*FLGRGR
Trigger: TCGACCCCTGCCCAAAAACAAGTTATTTACCAATCT...TTGTGCCAGGCACTTACTAAACACACAGTCAATGAGTATGTTCTCTCCGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562351.2
3UTR TCA 72 bp AAAACTGAGGGTTTGTTGGTGATTCAGTGTAAGATTTaGGTTCATATGCAGCACCGCTATCAACCTCCATTG +
Preference number: 3 (lower is better)
Translates to: KTEGLLVIQCKI*VHMQHRYQPPL
Trigger: CAATGGAGGTTGATAGCGGTGCTGCATATGAACTCAAATCTTACACTGAATCACCAACAAACCCTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534964.6
3UTR-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGTGAAAACTGAGGGTTaGTTGGTGATTCAGTGTAAG +
Preference number: 3 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEVKTEG*LVIQCK
Trigger: CTTACACTGAATCACCAACAAACCCTCAGTTTTCAC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534964.6
3UTR-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCTCCTGATTGTTAATTaGGTACACTCCATTCTATGC +
Preference number: 3 (lower is better)
Translates to: SLVHIALLIQYVKGLLCELLIVN*VHSILC
Trigger: GCATAGAATGGAGTGTACCAAATTAACAATCAGGAG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
3UTR-3UTR CAA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGCTCCTGATTGTTAATTaGGTACACTCCATTCTATGC +
Preference number: 3 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRLLIVN*VHSILC
Trigger: GCATAGAATGGAGTGTACCAAATTAACAATCAGGAG...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
3UTR CCA 72 bp CAGAAAAAGTTCTTTGTCGTAGGAATGTCTGATGATTaGCTGGCATATCTCGTAAATCATATATCACAACAA +
Preference number: 3 (lower is better)
Translates to: QKKFFVVGMSDD*LAYLVNHISQQ
Trigger: TTGTTGTGATATATGATTTACGAGATATGCCAGCCAATCATCAGACATTCCTACGACAAAGAACTTTTTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp GCAGAAAGCACCACTTGCCCCTACCTCGGCAGTAAAACCATCAACAATGCCGAGGCAGAAAGCACCACTTaGCCCTACCTCGGCAGTAAA +
Preference number: 4 (lower is better)
Translates to: AESTTCPYLGSKTINNAEAESTT*PYLGSK
Trigger: TTTACTGCCGAGGTAGGGGCAAGTGGTGCTTTCTGC...CTCGGCATTGTTGATGGTTTTACTGCCGAGGTAGGGGCAAGTGGTGCTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570204.1
CDS-3UTR TCA 90 bp AGAGACGTACAGCCAAAATTCATATACATCACAGGCTGCCACCACTCAATTCTACAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RDVQPKFIYITGCHHSILQQARR*FYGFCF
Trigger: GAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTG...TAGAATTGAGTGGTGGCAGCCTGTGATGTATATGAATTTTGGCTGTACGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR GCA 90 bp ACATACTCATTGACTGTGTGTTTAGTAAGTGCCTGGCACAACCACTTCACTCAGAATTCTTCCACCTGGTaGCTGGGCGCAGCCAACTCT +
Preference number: 4 (lower is better)
Translates to: TYSLTVCLVSAWHNHFTQNSSTW*LGAANS
Trigger: AGAGTTGGCTGCGCCCAGGCACCAGGTGGAAGAATT...CTGAGTGAAGTGGTTGTGCCAGGCACTTACTAAACACACAGTCAATGAGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CCA 90 bp CATTCAAACTCAAAATATAGGAGACCACCACAAACAGAAAGGGATAGTGGAGGCGGAAATTCTTCCACCTaGTGCCTGGGCGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: HSNSKYRRPPQTERDSGGGNSST*CLGAAN
Trigger: GTTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCC...GCCTCCACTATCCCTTTCTGTTTGTGGTGGTCTCCTATATTTTGAGTTTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIQQARR*FYGFCF
Trigger: GAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATTCAGCGTTGGGTGCTaGTCCCGCTTCCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILFSVGC*SRFPPC
Trigger: ACACGGAGGGAAGCGGGATCAGCACCCAACGCTGAA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACTGGCTTGGCGGCACTaGGCCAGCTTGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTILAWRH*ASLSLH
Trigger: ATGTAGTGACAAGCTGGCCCAGTGCCGCCAAGCCAG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACTAGTTCGTCTGGCTTaGCGGCACTGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLVRLA*RHWASL
Trigger: CAAGCTGGCCCAGTGCCGCCAAGCCAGACGAACTAG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp ACAAACCATCAAACATGCATGCTCCCTTCCCATTCAAACTCAAAATATAGGAGACTTCCACCTGGTGCCTaGGCGCAGCCAACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TNHQTCMLPSHSNSKYRRLPPGA*AQPTLP
Trigger: TGGAAGAGTTGGCTGCGCCCAGGCACCAGGTGGAAG...TCTCCTATATTTTGAGTTTGAATGGGAAGGGAGCATGCATGTTTGATGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CCA 90 bp TCATTGACTGTGTGTTTAGTAAGTGCCTGGCACAACCACTTCACTCAGATTATGGCACCTCCGCAGGGCTaGTATGGAAATTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: SLTVCLVSAWHNHFTQIMAPPQG*YGNSST
Trigger: GGTGGAAGAATTTCCATACCAGCCCTGCGGAGGTGC...CATAATCTGAGTGAAGTGGTTGTGCCAGGCACTTACTAAACACACAGTCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp AAAGCACCACTTGCCCCTACCTCGGCAGTAAAACCATCAACAATGCCGAGAGGACAGATCAAAGCAACCTaGTTGTGTTTTTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: KAPLAPTSAVKPSTMPRGQIKAT*LCFSLR
Trigger: CCTCAAAGAAAAACACAATCAGGTTGCTTTGATCTG...TCCTCTCGGCATTGTTGATGGTTTTACTGCCGAGGTAGGGGCAAGTGGTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570204.1
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACTGGCTTGGCGGCACTaGGCCAGCTTGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLAWRH*ASLSLH
Trigger: ATGTAGTGACAAGCTGGCCCAGTGCCGCCAAGCCAG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCTAGTTCGTCTGGCTTaGCGGCACTGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCELVRLA*RHWASL
Trigger: CAAGCTGGCCCAGTGCCGCCAAGCCAGACGAACTAG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGCTAGTTCGTCTGGCTTaGCGGCACTGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRLVRLA*RHWASL
Trigger: CAAGCTGGCCCAGTGCCGCCAAGCCAGACGAACTAG...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACAATTCCCTCTGTGGTaGGCCCATCATCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIQFPLW*AHHRCS
Trigger: GCTACAGCGATGATGGGCCCACCACAGAGGGAATTG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp CATTCAAACTCAAAATATAGGAGACCACCACAAACAGAAAGGGATAGTGGAGGCGTACAAAAACGCCTCTaGAAACAGAGGCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: HSNSKYRRPPQTERDSGGVQKRL*KQRHLR
Trigger: GCGGAGGTGCCTCTGTTTCCAGAGGCGTTTTTGTAC...GCCTCCACTATCCCTTTCTGTTTGTGGTGGTCTCCTATATTTTGAGTTTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRQQARR*FYGFCF
Trigger: GAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTG...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAGTCTCACCAGCTGACTaGCAGAAACTCTGGCGGTTA +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIVSPAD*QKLWRL
Trigger: TAACCGCCAGAGTTTCTGGCAGTCAGCTGGTGAGAC...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGCTGGCTTGGCGGCACTaGGCCAGCTTGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRLAWRH*ASLSLH
Trigger: ATGTAGTGACAAGCTGGCCCAGTGCCGCCAAGCCAG...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACAATTCCCTCTGTGGTaGGCCCATCATCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILQFPLW*AHHRCS
Trigger: GCTACAGCGATGATGGGCCCACCACAGAGGGAATTG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATGATCAATTCCCTCTGTaGTGGGCCCATCATCGCTGT +
Preference number: 4 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYDQFPL*WAHHRC
Trigger: ACAGCGATGATGGGCCCACCACAGAGGGAATTGATC...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACACTTCCACCTGGTGCCTaGGCGCAGCCAACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTLPPGA*AQPTLP
Trigger: TGGAAGAGTTGGCTGCGCCCAGGCACCAGGTGGAAG...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGGAAATTCTTCCACCTaGTGCCTGGGCGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEGNSST*CLGAAN
Trigger: GTTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTCGCCCAGAGTGCTGTaGAATGCACCTGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCESPRVL*NAPVGS
Trigger: AGAACCCACAGGTGCATTTCACAGCACTCTGGGCGA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp ACAGTTGTATGTGTATTTAGCCAATCTTGTGTAGGTGTAAGGAGACTCAATCATTCGCCCAGAGTGCTGTaGAATGCACCTGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TVVCVFSQSCVGVRRLNHSPRVL*NAPVGS
Trigger: AGAACCCACAGGTGCATTTCACAGCACTCTGGGCGA...ATGATTGAGTCTCCTTACACCTACACAAGATTGGCTAAATACACATACAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATGTGCTGGAGGGCAATaGAAGCTTTCTGTTCGACCT +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTICAGGQ*KLSVRP
Trigger: AGGTCGAACAGAAAGCTTTCATTGCCCTCCAGCACA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACTGCCGGGGGATATGTaGTGCTGTTGGATCAATGTG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLPGDM*CCWINV
Trigger: CACATTGATCCAACAGCATCACATATCCCCCGGCAG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGTCTCACCAGCTGACTaGCAGAAACTCTGGCGGTTA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILVSPAD*QKLWRL
Trigger: TAACCGCCAGAGTTTCTGGCAGTCAGCTGGTGAGAC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAACCGAACTGGAGTCATaGATGTTGAATGACTGCCGG +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTITELES*MLNDCR
Trigger: CCGGCAGTCATTCAACATGCATGACTCCAGTTCGGT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGCAGAAAGCACCACTTaGCCCTACCTCGGCAGTAAA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILAESTT*PYLGSK
Trigger: TTTACTGCCGAGGTAGGGGCAAGTGGTGCTTTCTGC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATGTGTAATTACCCTCTaGCTAGCCTTCCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTICVITL*LAFLRQ
Trigger: TTGCCGCAGGAAGGCTAGCCAGAGGGTAATTACACA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCAATTCCCTCTGTGGTaGGCCCATCATCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEQFPLW*AHHRCS
Trigger: GCTACAGCGATGATGGGCCCACCACAGAGGGAATTG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGATCAATTCCCTCTGTaGTGGGCCCATCATCGCTGT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILDQFPL*WAHHRC
Trigger: ACAGCGATGATGGGCCCACCACAGAGGGAATTGATC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp ACAAACCATCAAACATGCATGCTCCCTTCCCATTCAAACTCAAAATATAGGAGATCCGCAGGGCTGGTATaGAAATTCTTCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: TNHQTCMLPSHSNSKYRRSAGLV*KFFHLV
Trigger: CACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGA...TCTCCTATATTTTGAGTTTGAATGGGAAGGGAGCATGCATGTTTGATGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAACAAATGTTCAGCGTTaGGTGCTGATCCCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILTNVQR*VLIPLP
Trigger: GGGAAGCGGGATCAGCACCCAACGCTGAACATTTGT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGTGCTGGAGGGCAATaGAAGCTTTCTGTTCGACCT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILCAGGQ*KLSVRP
Trigger: AGGTCGAACAGAAAGCTTTCATTGCCCTCCAGCACA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACGTGGAATAGCACCATaGGAAACACTCAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILRGIAP*ETLSHA
Trigger: TGCATGGCTGAGTGTTTCTCATGGTGCTATTCCACG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGTCTGGGCAAGGACTaGACACTGACTTTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILCLGKD*TLTFKA
Trigger: TGCCTTGAAAGTCAGTGTTCAGTCCTTGCCCAGACA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGCTGCCGGGGGATATGTaGTGCTGTTGGATCAATGTG +
Preference number: 4 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRLPGDM*CCWINV
Trigger: CACATTGATCCAACAGCATCACATATCCCCCGGCAG...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGGAGTCATGCATGTTaGATGACTGCCGGGGGATAT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILWSHAC*MTAGGY
Trigger: ATATCCCCCGGCAGTCATTCAACATGCATGACTCCA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp CATTCAAACTCAAAATATAGGAGACCACCACAAACAGAAAGGGATAGTGGAGGCAGTCACTGCTCCATCTaGCACTGTCTCTCAATTACT +
Preference number: 4 (lower is better)
Translates to: HSNSKYRRPPQTERDSGGSHCSI*HCLSIT
Trigger: AGTAATTGAGAGACAGTGTCAGATGGAGCAGTGACT...GCCTCCACTATCCCTTTCTGTTTGTGGTGGTCTCCTATATTTTGAGTTTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR GCA 90 bp AGAGACGTACAGCCAAAATTCATATACATCACAGGCTGCCACCACTCAATTCTACAGAGTGCTGTGAAATaGACCTGTGGGTTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RDVQPKFIYITGCHHSILQSAVK*TCGFFQ
Trigger: TTGAAAGAACCCACAGGTGCATTTCACAGCACTCTG...TAGAATTGAGTGGTGGCAGCCTGTGATGTATATGAATTTTGGCTGTACGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR GCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGTCTCACCAGCTGACTaGCAGAAACTCTGGCGGTTA +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEVSPAD*QKLWRL
Trigger: TAACCGCCAGAGTTTCTGGCAGTCAGCTGGTGAGAC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATGCATGTTGAATGACTaGCGGGGGATATGTGATGCT +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTICMLND*RGICDA
Trigger: AGCATCACATATCCCCCGGCAGTCATTCAACATGCA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAACCGAACTGGAGTCATaGATGTTGAATGACTGCCGG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILTELES*MLNDCR
Trigger: CCGGCAGTCATTCAACATGCATGACTCCAGTTCGGT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGCAGAAAGCACCACTTaGCCCTACCTCGGCAGTAAA +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEAESTT*PYLGSK
Trigger: TTTACTGCCGAGGTAGGGGCAAGTGGTGCTTTCTGC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAAATTCTTCCACCTGGTaGCTGGGCGCAGCCAACTCT +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTNSSTW*LGAANS
Trigger: AGAGTTGGCTGCGCCCAGGCACCAGGTGGAAGAATT...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp AGAGAGGAAACATCAGTAAGACCTCATAAACTGAGTGCCTCAATTGAAGCTCGCACAAACCATCAAACATaGATGCTCCCTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: REETSVRPHKLSASIEARTNHQT*MLPSHS
Trigger: TGAATGGGAAGGGAGCATGCATGTTTGATGGTTTGT...GCGAGCTTCAATTGAGGCACTCAGTTTATGAGGTCTTACTGATGTTTCCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGATCAATTCCCTCTGTaGTGGGCCCATCATCGCTGT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEDQFPL*WAHHRC
Trigger: ACAGCGATGATGGGCCCACCACAGAGGGAATTGATC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGTCCGCAGGGCTGGTATaGAAATTCTTCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRSAGLV*KFFHLV
Trigger: CACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGA...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAGCACCTCCGCAGGGCTaGTATGGAAATTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTAPPQG*YGNSST
Trigger: GGTGGAAGAATTTCCATACCAGCCCTGCGGAGGTGC...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGTACAAAAACGCCTCTaGAAACAGAGGCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEVQKRL*KQRHLR
Trigger: GCGGAGGTGCCTCTGTTTCCAGAGGCGTTTTTGTAC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp AGAGAGGAAACATCAGTAAGACCTCATAAACTGAGTGCCTCAATTGAAGCTCGCATAGGGATGTTGTCATaGGGGAGCAATGTGAAATGT +
Preference number: 4 (lower is better)
Translates to: REETSVRPHKLSASIEARIGMLS*GSNVKC
Trigger: ACATTTCACATTGCTCCCCCATGACAACATCCCTAT...GCGAGCTTCAATTGAGGCACTCAGTTTATGAGGTCTTACTGATGTTTCCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTGTGCTGGAGGGCAATaGAAGCTTTCTGTTCGACCT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCECAGGQ*KLSVRP
Trigger: AGGTCGAACAGAAAGCTTTCATTGCCCTCCAGCACA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTCGTGGAATAGCACCATaGGAAACACTCAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTRGIAP*ETLSHA
Trigger: TGCATGGCTGAGTGTTTCTCATGGTGCTATTCCACG...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGCTACACAGACGCTGTaGACTGTTTGTACCACATTG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILATQTL*TVCTTL
Trigger: CAATGTGGTACAAACAGTTCACAGCGTCTGTGTAGC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACCTAGAATATTGGCTTaGGATGTCCCATGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIPRILA*DVPWSD
Trigger: ATCTGACCATGGGACATCTCAAGCCAATATTCTAGG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTGGAGTCATGCATGTTaGATGACTGCCGGGGGATAT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEWSHAC*MTAGGY
Trigger: ATATCCCCCGGCAGTCATTCAACATGCATGACTCCA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAGGAACCTCAGATGTATaGGGTAGCGTAATAACCGTT +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIGTSDV*GSVITV
Trigger: AACGGTTATTACGCTACCTCATACATCTGAGGTTCC...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATGCTATCAACCTCCATTaGCTTTCTAGAGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYAINLH*LSREQE
Trigger: CTCCTGTTCTCTAGAAAGTCAATGGAGGTTGATAGC...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp ACAAACCATCAAACATGCATGCTCCCTTCCCATTCAAACTCAAAATATAGGAGAACTGAGTGCCTCAATTaGAGCTCGCACTTAATGGGA +
Preference number: 4 (lower is better)
Translates to: TNHQTCMLPSHSNSKYRRTECLN*SSHLMG
Trigger: TCCCATTAAGTGCGAGCTTCAATTGAGGCACTCAGT...TCTCCTATATTTTGAGTTTGAATGGGAAGGGAGCATGCATGTTTGATGGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp ACATACTCATTGACTGTGTGTTTAGTAAGTGCCTGGCACAACCACTTCACTCAGTCATATTTGCTGCAATaGTTACCCACTGACTTGCAT +
Preference number: 4 (lower is better)
Translates to: TYSLTVCLVSAWHNHFTQSYLLQ*LPTDLH
Trigger: ATGCAAGTCAGTGGGTAATCATTGCAGCAAATATGA...CTGAGTGAAGTGGTTGTGCCAGGCACTTACTAAACACACAGTCAATGAGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAATTTTCGCCCAGAGTaGTGTGAAATGCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILNFRPE*CEMHLW
Trigger: CCACAGGTGCATTTCACAGCACTCTGGGCGAAAATT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGGGTAACAAGACTGTaGTGGAGGGCAATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILWVTRL*WRAMKA
Trigger: AGCTTTCATTGCCCTCCAGCACAGTCTTGTTACCCA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATGGTCCAAGTTTGTTTaGTACACAGACGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIWSKFV*YTDAVN
Trigger: GTTCACAGCGTCTGTGTAGCAAACAAACTTGGACCA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGCATGTTGAATGACTaGCGGGGGATATGTGATGCT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILCMLND*RGICDA
Trigger: AGCATCACATATCCCCCGGCAGTCATTCAACATGCA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGACCGAACTGGAGTCATaGATGTTGAATGACTGCCGG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCETELES*MLNDCR
Trigger: CCGGCAGTCATTCAACATGCATGACTCCAGTTCGGT...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTGTGTAATTACCCTCTaGCTAGCCTTCCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTCVITL*LAFLRQ
Trigger: TTGCCGCAGGAAGGCTAGCCAGAGGGTAATTACACA...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAATTCTGTCGAGGAACTaGCTCCAAGATCCATCTTTC +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIILSRN*LQDPSF
Trigger: GAAAGATGGATCTTGGAGCCAGTTCCTCGACAGAAT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACACTTTCAGGTGCCATaGTCCAAGTTTGTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIHFQVP*SKFVCY
Trigger: GTAGCAAACAAACTTGGACCATGGCACCTGAAAGTG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAAGCTGCAGTATATTCTaGACTTGGGCCACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTISCSIF*TWATFC
Trigger: GCAAAAAGTGGCCCAAGTCCAGAATATACTGCAGCT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGACTGCCAGAAACTCTaGCGGTTAGAGATACTGGAA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILDCQKL*RLEILE
Trigger: TTCCAGTATCTCTAACCGCCAGAGTTTCTGGCAGTC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGAGGATGAAAGGCTCTaGTTGAAGTTCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILEDERL*LKFHPR
Trigger: CCTTGGATGGAACTTCAACCAGAGCCTTTCATCCTC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp CATTCAAACTCAAAATATAGGAGACCACCACAAACAGAAAGGGATAGTGGAGGCACCACTCAATTCTACTaGCCCTCTTTTACTAGAGGT +
Preference number: 4 (lower is better)
Translates to: HSNSKYRRPPQTERDSGGTTQFY*PSFTRG
Trigger: ACCTCTAGTAAAAGAGGGCCAGTAGAATTGAGTGGT...GCCTCCACTATCCCTTTCTGTTTGTGGTGGTCTCCTATATTTTGAGTTTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGCAAGGACTGAACACTaGCTTTCAAGGCAACATTGT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILARTEH*LSRQHC
Trigger: ACAATGTTGCCTTGAAAGTCAGTGTTCAGTCCTTGC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACATGTCTGGGCAAGGACTaGACACTGACTTTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTCLGKD*TLTFKA
Trigger: TGCCTTGAAAGTCAGTGTTCAGTCCTTGCCCAGACA...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGCTACACAGACGCTGTaGACTGTTTGTACCACATTG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEATQTL*TVCTTL
Trigger: CAATGTGGTACAAACAGTTCACAGCGTCTGTGTAGC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACCTAGAATATTGGCTTaGGATGTCCCATGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILPRILA*DVPWSD
Trigger: ATCTGACCATGGGACATCTCAAGCCAATATTCTAGG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAACGTCCAGAAACATGTaGAGTGCTTGGATCACAATG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILTSRNM*SAWITM
Trigger: CATTGTGATCCAAGCACTTCACATGTTTCTGGACGT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAATGTGCTCCAAGTGTTaGGCAATCCTTGCAATAACA +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIMCSKC*AILAIT
Trigger: TGTTATTGCAAGGATTGCTCAACACTTGGAGCACAT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp AAACACTGTAGAATGACACTTCAACTGGAAGAGTCAAATGTGTGGGGCAGAAAGGATTGTGTTTTTCTTTaGGGAACAGGGCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: KHCRMTLQLEESNVWGRKDCVFL*GTGLER
Trigger: TCTTTCAAGCCCTGTTCCTCAAAGAAAAACACAATC...CTTTCTGCCCCACACATTTGACTCTTCCAGTTGAAGTGTCATTCTACAGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570204.1
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGGAACCTCAGATGTATaGGGTAGCGTAATAACCGTT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILGTSDV*GSVITV
Trigger: AACGGTTATTACGCTACCTCATACATCTGAGGTTCC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGCTATCAACCTCCATTaGCTTTCTAGAGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILAINLH*LSREQE
Trigger: CTCCTGTTCTCTAGAAAGTCAATGGAGGTTGATAGC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACTGAGGGTTTGTTGGTaGTTCAGTGTAAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTILRVCW*FSVRFE
Trigger: CTCAAATCTTACACTGAATCACCAACAAACCCTCAG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAATGGGCATGATGATCTaGACTTGCAAAGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILMGMMI*TCKGKV
Trigger: CACTTTCCCTTTGCAAGTTCAGATCATCATGCCCAT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp CATTCAAACTCAAAATATAGGAGACCACCACAAACAGAAAGGGATAGTGGAGGCTGCTTCCAAGTGATATaGCTAAACTCTTTTGGCTAC +
Preference number: 4 (lower is better)
Translates to: HSNSKYRRPPQTERDSGGCFQVI*LNSFGY
Trigger: GTAGCCAAAAGAGTTTAGTCATATCACTTGGAAGCA...GCCTCCACTATCCCTTTCTGTTTGTGGTGGTCTCCTATATTTTGAGTTTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp ACATACTCATTGACTGTGTGTTTAGTAAGTGCCTGGCACAACCACTTCACTCAGACAATTACCTATCACTaGTACATGTCATTACCTCTG +
Preference number: 4 (lower is better)
Translates to: TYSLTVCLVSAWHNHFTQTITYH*YMSLPL
Trigger: CAGAGGTAATGACATGTATCAGTGATAGGTAATTGT...CTGAGTGAAGTGGTTGTGCCAGGCACTTACTAAACACACAGTCAATGAGTATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp ACATACTCATTGACTGTGTGTTTAGTAAGTGCCTGGCACAACCACTTCACTCAGGCAATGATTACCCACTaGCTTGCATTCATTATAACA +
Preference number: 4 (lower is better)
Translates to: TYSLTVCLVSAWHNHFTQAMITH*LAFIIT
Trigger: TGTTATAATGAATGCAAGTCAGTGGGTAATCATTGC...CTGAGTGAAGTGGTTGTGCCAGGCACTTACTAAACACACAGTCAATGAGTATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACAGAGTGCTGTGAAATaGACCTGTGGGTTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILQSAVK*TCGFFQ
Trigger: TTGAAAGAACCCACAGGTGCATTTCACAGCACTCTG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGAATTTTCGCCCAGAGTaGTGTGAAATGCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCENFRPE*CEMHLW
Trigger: CCACAGGTGCATTTCACAGCACTCTGGGCGAAAATT...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTGGGTAACAAGACTGTaGTGGAGGGCAATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEWVTRL*WRAMKA
Trigger: AGCTTTCATTGCCCTCCAGCACAGTCTTGTTACCCA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAGGAACAGGAAACACATaGTCAATTGGAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIGTGNT*SIGVCE
Trigger: TTCACAGACTCCAATTGAGCATGTGTTTCCTGTTCC...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGGTCCAAGTTTGTTTaGTACACAGACGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILWSKFV*YTDAVN
Trigger: GTTCACAGCGTCTGTGTAGCAAACAAACTTGGACCA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACATGGTCAGATTTACTaGCAGTGCCTGGATATAGTT +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIHGQIY*QCLDIV
Trigger: AACTATATCCAGGCACTGGCAGTAAATCTGACCATG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACTTGCAATAACATCTTaGCGCTCCTGGAGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLAITS*RSWSKE
Trigger: CTCTTTACTCCAGGAGCGGCAAGATGTTATTGCAAG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGTGTTGAGCAATCCTTaGAATAACATCTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILVLSNP*NNILPL
Trigger: GAGCGGCAAGATGTTATTGCAAGGATTGCTCAACAC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGTGCATGTTGAATGACTaGCGGGGGATATGTGATGCT +
Preference number: 4 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRCMLND*RGICDA
Trigger: AGCATCACATATCCCCCGGCAGTCATTCAACATGCA...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATTGGGGGTTTTGCTATTaGAACATGTCCAATGAAGTG +
Preference number: 4 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYWGFCY*NMSNEV
Trigger: CACTTCATTGGACATGTTGCAATAGCAAAACCCCCA...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp AGAGACGTACAGCCAAAATTCATATACATCACAGGCTGCCACCACTCAATTCTACCTAGCAATCATATTTaGTGCAATGATTACCCACTG +
Preference number: 4 (lower is better)
Translates to: RDVQPKFIYITGCHHSILPSNHI*CNDYPL
Trigger: CAGTGGGTAATCATTGCAGCAAATATGATTGCTAGG...TAGAATTGAGTGGTGGCAGCCTGTGATGTATATGAATTTTGGCTGTACGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACAGAGTATCTCGGTCTaGCTTCATTTTCACATCCAA +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIQSISV*LHFHIQ
Trigger: TTGGATGTGAAAATGAAGCCAGACCGAGATACTCTG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGTAACAAGACTGTGCTaGAGGGCAATGAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILVTRLC*RAMKAF
Trigger: GAAAGCTTTCATTGCCCTCCAGCACAGTCTTGTTAC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAATGTTTGGTAGTTACTaGGTAACAAGACTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIMFGSY*VTRLCW
Trigger: CCAGCACAGTCTTGTTACCCAGTAACTACCAAACAT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAATTCTGTCGAGGAACTaGCTCCAAGATCCATCTTTC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILILSRN*LQDPSF
Trigger: GAAAGATGGATCTTGGAGCCAGTTCCTCGACAGAAT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACACTTTCAGGTGCCATaGTCCAAGTTTGTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILHFQVP*SKFVCY
Trigger: GTAGCAAACAAACTTGGACCATGGCACCTGAAAGTG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAGCTGCAGTATATTCTaGACTTGGGCCACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILSCSIF*TWATFC
Trigger: GCAAAAAGTGGCCCAAGTCCAGAATATACTGCAGCT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATGGGGAACTAAACTCTaGACTACCAAAAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIWGTKL*TTKSHG
Trigger: TCCATGACTTTTGGTAGTCCAGAGTTTAGTTCCCCA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACTCATTGGTGTCTTCTaGGGAACTAAACTCTGGACT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLIGVF*GTKLWT
Trigger: AGTCCAGAGTTTAGTTCCCCAGAAGACACCAATGAG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGAGGATGAAAGGCTCTaGTTGAAGTTCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEEDERL*LKFHPR
Trigger: CCTTGGATGGAACTTCAACCAGAGCCTTTCATCCTC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACCAGATTTAGAACTCTaGAACCTCAGATGTATGAGG +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIPDLEL*NLRCMR
Trigger: CCTCATACATCTGAGGTTCCAGAGTTCTAAATCTGG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp ACAAACCATCAAACATGCATGCTCCCTTCCCATTCAAACTCAAAATATAGGAGACCTCGTTTCTCGGTCTaGCTTCATTTTCACATCCAA +
Preference number: 4 (lower is better)
Translates to: TNHQTCMLPSHSNSKYRRPRFSV*LHFHIQ
Trigger: TTGGATGTGAAAATGAAGCCAGACCGAGAAACGAGG...TCTCCTATATTTTGAGTTTGAATGGGAAGGGAGCATGCATGTTTGATGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATTCAAGGCAACATTGTaGGAAACATTGGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILFKATL*ETLGTG
Trigger: TCCTGTTCCCAATGTTTCTCACAATGTTGCCTTGAA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGCAAGGACTGAACACTaGCTTTCAAGGCAACATTGT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEARTEH*LSRQHC
Trigger: ACAATGTTGCCTTGAAAGTCAGTGTTCAGTCCTTGC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTGCAAGGACTGAACACTaGCTTTCAAGGCAACATTGT +
Preference number: 4 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTARTEH*LSRQHC
Trigger: ACAATGTTGCCTTGAAAGTCAGTGTTCAGTCCTTGC...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCCTAGAATATTGGCTTaGGATGTCCCATGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEPRILA*DVPWSD
Trigger: ATCTGACCATGGGACATCTCAAGCCAATATTCTAGG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTACGTCCAGAAACATGTaGAGTGCTTGGATCACAATG +
Preference number: 4 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTTSRNM*SAWITM
Trigger: CATTGTGATCCAAGCACTTCACATGTTTCTGGACGT...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAATGTGCTCCAAGTGTTaGGCAATCCTTGCAATAACA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILMCSKC*AILAIT
Trigger: TGTTATTGCAAGGATTGCTCAACACTTGGAGCACAT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAGTTTTTCCCATCACTaGTGTCTCCTAACAAGGAAC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILSFSHH*CLLTRN
Trigger: GTTCCTTGTTAGGAGACATCAGTGATGGGAAAAACT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATTTTCGCCACACATTTaGATGTTTCAGTGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIFSPHI*MFQCSP
Trigger: AGGACTACACTGAAACATTCAAATGTGTGGCGAAAA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAGTTCCATCCAAGGAATaGAAATTATGTTTTCGCCAC +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIVPSKE*KLCFRH
Trigger: GTGGCGAAAACATAATTTTCATTCCTTGGATGGAAC...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATGATTGTGTTTTTCTTTaGGGAACAGGGCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYDCVFL*GTGLER
Trigger: TCTTTCAAGCCCTGTTCCTCAAAGAAAAACACAATC...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATCAGATCAAAGCAACCTaGTTGTGTTTTTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYQIKAT*LCFSLR
Trigger: CCTCAAAGAAAAACACAATCAGGTTGCTTTGATCTG...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGGAACCTCAGATGTATaGGGTAGCGTAATAACCGTT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEGTSDV*GSVITV
Trigger: AACGGTTATTACGCTACCTCATACATCTGAGGTTCC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAATTCAGTGTAAGATTTaGGTTCATATGCAGCACCGC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILIQCKI*VHMQHR
Trigger: GCGGTGCTGCATATGAACTCAAATCTTACACTGAAT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACTGAGGGTTTGTTGGTaGTTCAGTGTAAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLRVCW*FSVRFE
Trigger: CTCAAATCTTACACTGAATCACCAACAAACCCTCAG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGATGGGCATGATGATCTaGACTTGCAAAGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEMGMMI*TCKGKV
Trigger: CACTTTCCCTTTGCAAGTTCAGATCATCATGCCCAT...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATATACTATCAGTAACTaGGGGATCCAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILYTISN*GIQMSA
Trigger: TGCAGACATCTGGATCCCTCAGTTACTGATAGTATA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS-3UTR TCA 90 bp CATTCAAACTCAAAATATAGGAGACCACCACAAACAGAAAGGGATAGTGGAGGCAGAAATCTGGTAGAGTaGCACAGTTGTATGTGTATT +
Preference number: 4 (lower is better)
Translates to: HSNSKYRRPPQTERDSGGRNLVE*HSCMCI
Trigger: AATACACATACAACTGTGTCACTCTACCAGATTTCT...GCCTCCACTATCCCTTTCTGTTTGTGGTGGTCTCCTATATTTTGAGTTTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR GCA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGCAGAGTGCTGTGAAATaGACCTGTGGGTTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRQSAVK*TCGFFQ
Trigger: TTGAAAGAACCCACAGGTGCATTTCACAGCACTCTG...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGGAACAGGAAACACATaGTCAATTGGAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILGTGNT*SIGVCE
Trigger: TTCACAGACTCCAATTGAGCATGTGTTTCCTGTTCC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATGTACCACATTGTTCTaGTTCATTTGGGTTATGGTG +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTICTTLF*FIWVMV
Trigger: CACCATAACCCAAATGAAGCAGAACAATGTGGTACA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATTGTACCACATTGTTCTaGTTCATTTGGGTTATGGTG +
Preference number: 4 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYCTTLF*FIWVMV
Trigger: CACCATAACCCAAATGAAGCAGAACAATGTGGTACA...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACATGGTCAGATTTACTaGCAGTGCCTGGATATAGTT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILHGQIY*QCLDIV
Trigger: AACTATATCCAGGCACTGGCAGTAAATCTGACCATG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAATGTTGGGCAATTCTTaGAATGATTTCTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILMLGNS*NDFLPL
Trigger: GAGCGGCAAGAAATCATTGCAAGAATTGCCCAACAT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTCTTGCAATAACATCTTaGCGCTCCTGGAGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTLAITS*RSWSKE
Trigger: CTCTTTACTCCAGGAGCGGCAAGATGTTATTGCAAG...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGTGTTGAGCAATCCTTaGAATAACATCTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEVLSNP*NNILPL
Trigger: GAGCGGCAAGATGTTATTGCAAGGATTGCTCAACAC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACCTAAACACTTTAGATaGAACCGAACTGGAGTCATG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILPKHFR*NRTGVM
Trigger: CATGACTCCAGTTCGGTTGCATCTAAAGTGTTTAGG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAGATTTGAGTTCATATaGAGCACCGCTATCAACCTC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILRFEFI*STAINL
Trigger: GAGGTTGATAGCGGTGCTGCATATGAACTCAAATCT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGGGGGTTTTGCTATTaGAACATGTCCAATGAAGTG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILWGFCY*NMSNEV
Trigger: CACTTCATTGGACATGTTGCAATAGCAAAACCCCCA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp AGAGACGTACAGCCAAAATTCATATACATCACAGGCTGCCACCACTCAATTCTAAAATGTGTGCAGAGGTaGATACGGGTTTTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: RDVQPKFIYITGCHHSILKCVQR*IRVFLY
Trigger: ATAAAGAAAAACCCGTATGCACCTCTGCACACATTT...TAGAATTGAGTGGTGGCAGCCTGTGATGTATATGAATTTTGGCTGTACGTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACAGAGTATCTCGGTCTaGCTTCATTTTCACATCCAA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILQSISV*LHFHIQ
Trigger: TTGGATGTGAAAATGAAGCCAGACCGAGATACTCTG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAATGTTTGGTAGTTACTaGGTAACAAGACTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILMFGSY*VTRLCW
Trigger: CCAGCACAGTCTTGTTACCCAGTAACTACCAAACAT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATCATTGTGAGAAACATTaGGAACAGGAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYHCEKH*EQETHA
Trigger: AGCATGTGTTTCCTGTTCCCAATGTTTCTCACAATG...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGAGCTGCAGTATATTCTaGACTTGGGCCACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRSCSIF*TWATFC
Trigger: GCAAAAAGTGGCCCAAGTCCAGAATATACTGCAGCT...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGGGGAACTAAACTCTaGACTACCAAAAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILWGTKL*TTKSHG
Trigger: TCCATGACTTTTGGTAGTCCAGAGTTTAGTTCCCCA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCTCATTGGTGTCTTCTaGGGAACTAAACTCTGGACT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCELIGVF*GTKLWT
Trigger: AGTCCAGAGTTTAGTTCCCCAGAAGACACCAATGAG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAGGATGAAAGGCTCTaGTTGAAGTTCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTEDERL*LKFHPR
Trigger: CCTTGGATGGAACTTCAACCAGAGCCTTTCATCCTC...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACCAGATTTAGAACTCTaGAACCTCAGATGTATGAGG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILPDLEL*NLRCMR
Trigger: CCTCATACATCTGAGGTTCCAGAGTTCTAAATCTGG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTTCAAGGCAACATTGTaGGAAACATTGGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEFKATL*ETLGTG
Trigger: TCCTGTTCCCAATGTTTCTCACAATGTTGCCTTGAA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAGGCCAATATTAGTGTaGATACTGCACGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILRPILV*ILHVKT
Trigger: AGTTTTGACGTGCAGTATTCACACTAATATTGGCCT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAGTGAACTAGACTCTTaGGTATTAAATGGACGTCCA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILSELDS*VLNGRP
Trigger: TGGACGTCCATTTAATACTCAAGAGTCTAGTTCACT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGAGTTTTTCCCATCACTaGTGTCTCCTAACAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCESFSHH*CLLTRN
Trigger: GTTCCTTGTTAGGAGACATCAGTGATGGGAAAAACT...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATTGTTCTGTGTCTCCTaGTACGTACTTTGGATGATT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLFCVS*YVLWMI
Trigger: AATCATCCAAAGTACGTATCAGGAGACACAGAACAA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATCATTTCTTGCTCCTTaGATCTGCTTGTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTISFLAP*ICLSNL
Trigger: TAGATTTGACAAGCAGATTCAAGGAGCAAGAAATGA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATTTTCGCCACACATTTaGATGTTTCAGTGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILFSPHI*MFQCSP
Trigger: AGGACTACACTGAAACATTCAAATGTGTGGCGAAAA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGTTCCATCCAAGGAATaGAAATTATGTTTTCGCCAC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILVPSKE*KLCFRH
Trigger: GTGGCGAAAACATAATTTTCATTCCTTGGATGGAAC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGATTGTGTTTTTCTTTaGGGAACAGGGCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILDCVFL*GTGLER
Trigger: TCTTTCAAGCCCTGTTCCTCAAAGAAAAACACAATC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACAGATCAAAGCAACCTaGTTGTGTTTTTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILQIKAT*LCFSLR
Trigger: CCTCAAAGAAAAACACAATCAGGTTGCTTTGATCTG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCTGAGGGTTTGTTGGTaGTTCAGTGTAAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCELRVCW*FSVRFE
Trigger: CTCAAATCTTACACTGAATCACCAACAAACCCTCAG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGAGAATCCACTCTCCTaGTTGTTAATTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILENPLS*LLIWYT
Trigger: AGTGTACCAAATTAACAATCAGGAGAGTGGATTCTC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGGAACAGGAAACACATaGTCAATTGGAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEGTGNT*SIGVCE
Trigger: TTCACAGACTCCAATTGAGCATGTGTTTCCTGTTCC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGTACCACATTGTTCTaGTTCATTTGGGTTATGGTG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILCTTLF*FIWVMV
Trigger: CACCATAACCCAAATGAAGCAGAACAATGTGGTACA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACATGGTCCAAGTTTGTTTaGTACACAGACGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTWSKFV*YTDAVN
Trigger: GTTCACAGCGTCTGTGTAGCAAACAAACTTGGACCA...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAGATATTTTTGACAGCTaGAGTATATTCTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIDIFDS*SIFWTW
Trigger: CCAAGTCCAGAATATACTGCAGCTGTCAAAAATATC...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGATGTTGGGCAATTCTTaGAATGATTTCTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEMLGNS*NDFLPL
Trigger: GAGCGGCAAGAAATCATTGCAAGAATTGCCCAACAT...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTATGTTGGGCAATTCTTaGAATGATTTCTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTMLGNS*NDFLPL
Trigger: GAGCGGCAAGAAATCATTGCAAGAATTGCCCAACAT...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACAGAAACATGTGAAGTaGTTGGATCACAATGAATCA +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIQKHVK*LDHNES
Trigger: TGATTCATTGTGATCCAAGCACTTCACATGTTTCTG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCCTAAACACTTTAGATaGAACCGAACTGGAGTCATG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEPKHFR*NRTGVM
Trigger: CATGACTCCAGTTCGGTTGCATCTAAAGTGTTTAGG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTGGGGGTTTTGCTATTaGAACATGTCCAATGAAGTG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEWGFCY*NMSNEV
Trigger: CACTTCATTGGACATGTTGCAATAGCAAAACCCCCA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp ACAGTTGTATGTGTATTTAGCCAATCTTGTGTAGGTGTAAGGAGACTCAATCATATATACATCACAGGCTaGCACCACTCAATTCTACTG +
Preference number: 4 (lower is better)
Translates to: TVVCVFSQSCVGVRRLNHIYITG*HHSILL
Trigger: CAGTAGAATTGAGTGGTGGCAGCCTGTGATGTATAT...ATGATTGAGTCTCCTTACACCTACACAAGATTGGCTAAATACACATACAACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACATTGTGAGAAACATTaGGAACAGGAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILHCEKH*EQETHA
Trigger: AGCATGTGTTTCCTGTTCCCAATGTTTCTCACAATG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAACTGCACGTCAAAACTaGATAATTAGATTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILTARQN*IIRLSG
Trigger: CCCAGACAATCTAATTATCCAGTTTTGACGTGCAGT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATTGTTCTGCTTCATTTaGGTTATGGTGCTGATGAGT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLFCFI*VMVLMS
Trigger: ACTCATCAGCACCATAACCCAAATGAAGCAGAACAA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTGGGGAACTAAACTCTaGACTACCAAAAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEWGTKL*TTKSHG
Trigger: TCCATGACTTTTGGTAGTCCAGAGTTTAGTTCCCCA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAATTTTGTGTGAGAAATaGAAACTGAGGACTCATCCT +
Preference number: 4 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIILCEK*KLRTHP
Trigger: AGGATGAGTCCTCAGTTTCCATTTCTCACACAAAAT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGGAATGTCTGATGATTaGCTGGCATATCTCGTAAAT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILGMSDD*LAYLVN
Trigger: ATTTACGAGATATGCCAGCCAATCATCAGACATTCC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGAGTGAACTAGACTCTTaGGTATTAAATGGACGTCCA +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCESELDS*VLNGRP
Trigger: TGGACGTCCATTTAATACTCAAGAGTCTAGTTCACT...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAATGTGCTCCAAGTGTTaGGCAATCCTTGCAATAACA +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTMCSKC*AILAIT
Trigger: TGTTATTGCAAGGATTGCTCAACACTTGGAGCACAT...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGTGAGAAATGGAAACTaGGGACTCATCCTTATTTTT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILVRNGN*GLILIF
Trigger: AAAAATAAGGATGAGTCCTCAGTTTCCATTTCTCAC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTTGTTCTGTGTCTCCTaGTACGTACTTTGGATGATT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCELFCVS*YVLWMI
Trigger: AATCATCCAAAGTACGTATCAGGAGACACAGAACAA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATCATTTCTTGCTCCTTaGATCTGCTTGTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILSFLAP*ICLSNL
Trigger: TAGATTTGACAAGCAGATTCAAGGAGCAAGAAATGA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGATTGTGTTTTTCTTTaGGGAACAGGGCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEDCVFL*GTGLER
Trigger: TCTTTCAAGCCCTGTTCCTCAAAGAAAAACACAATC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCAGATCAAAGCAACCTaGTTGTGTTTTTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEQIKAT*LCFSLR
Trigger: CCTCAAAGAAAAACACAATCAGGTTGCTTTGATCTG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGATATTTTTGACAGCTaGAGTATATTCTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILDIFDS*SIFWTW
Trigger: CCAAGTCCAGAATATACTGCAGCTGTCAAAAATATC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACACATGGTCAGATTTACTaGCAGTGCCTGGATATAGTT +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTHGQIY*QCLDIV
Trigger: AACTATATCCAGGCACTGGCAGTAAATCTGACCATG...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACAGAAACATGTGAAGTaGTTGGATCACAATGAATCA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILQKHVK*LDHNES
Trigger: TGATTCATTGTGATCCAAGCACTTCACATGTTTCTG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACAGCTTAGTCCACATTaGACTGCTAATACAATATGT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILQLSPH*TANTIC
Trigger: ACATATTGTATTAGCAGTGCAATGTGGACTAAGCTG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATTGTATAAAGGAAGTTaGCTTCTGGCTATCAATAGC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLYKGS*LLAINS
Trigger: GCTATTGATAGCCAGAAGGCAACTTCCTTTATACAA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACATTTCCACCATGATTaGAAGGTTATTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILHFHHD*KVILPQ
Trigger: TTGTGGAAGAATAACCTTCCAATCATGGTGGAAATG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGTAGAGAATATTTCGTaGAATAGCACCATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILVENIS*NSTMRN
Trigger: GTTTCTCATGGTGCTATTCCACGAAATATTCTCTAC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGACTGCACGTCAAAACTaGATAATTAGATTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCETARQN*IIRLSG
Trigger: CCCAGACAATCTAATTATCCAGTTTTGACGTGCAGT...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTTGTTCTGCTTCATTTaGGTTATGGTGCTGATGAGT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCELFCFI*VMVLMS
Trigger: ACTCATCAGCACCATAACCCAAATGAAGCAGAACAA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTTGTTCTGCTTCATTTaGGTTATGGTGCTGATGAGT +
Preference number: 4 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTLFCFI*VMVLMS
Trigger: ACTCATCAGCACCATAACCCAAATGAAGCAGAACAA...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAATTTTGTGTGAGAAATaGAAACTGAGGACTCATCCT +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILILCEK*KLRTHP
Trigger: AGGATGAGTCCTCAGTTTCCATTTCTCACACAAAAT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGGGAATGTCTGATGATTaGCTGGCATATCTCGTAAAT +
Preference number: 4 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRGMSDD*LAYLVN
Trigger: ATTTACGAGATATGCCAGCCAATCATCAGACATTCC...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACACCAGATTTAGAACTCTaGAACCTCAGATGTATGAGG +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTPDLEL*NLRCMR
Trigger: CCTCATACATCTGAGGTTCCAGAGTTCTAAATCTGG...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATTGTGAGATAGCAACCTaGATATGGTGTTATAAAAAC +
Preference number: 4 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYCEIAT*IWCYKN
Trigger: GTTTTTATAACACCATATCCAGGTTGCTATCTCACA...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAAGGAAGTTGCCTTCTaGCTATCAATAGCTATACTA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILKEVAF*LSIAIL
Trigger: TAGTATAGCTATTGATAGCCAGAAGGCAACTTCCTT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS-3UTR TCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAAGGCCAATATTAGTGTaGATACTGCACGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTRPILV*ILHVKT
Trigger: AGTTTTGACGTGCAGTATTCACACTAATATTGGCCT...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAAGTGAACTAGACTCTTaGGTATTAAATGGACGTCCA +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTSELDS*VLNGRP
Trigger: TGGACGTCCATTTAATACTCAAGAGTCTAGTTCACT...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGTGAGAAATGGAAACTaGGGACTCATCCTTATTTTT +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEVRNGN*GLILIF
Trigger: AAAAATAAGGATGAGTCCTCAGTTTCCATTTCTCAC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR TCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTCATTTCTTGCTCCTTaGATCTGCTTGTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCESFLAP*ICLSNL
Trigger: TAGATTTGACAAGCAGATTCAAGGAGCAAGAAATGA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR GCA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTGATATTTTTGACAGCTaGAGTATATTCTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTDIFDS*SIFWTW
Trigger: CCAAGTCCAGAATATACTGCAGCTGTCAAAAATATC...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR GCA 90 bp ACAAACCATCAAACATGCATGCTCCCTTCCCATTCAAACTCAAAATATAGGAGAGATTACCCACTGACTTaGATTCATTATAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: TNHQTCMLPSHSNSKYRRDYPLT*IHYNKV
Trigger: TACCTTGTTATAATGAATGCAAGTCAGTGGGTAATC...TCTCCTATATTTTGAGTTTGAATGGGAAGGGAGCATGCATGTTTGATGGTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGTAGAGAATATTTCGTaGAATAGCACCATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEVENIS*NSTMRN
Trigger: GTTTCTCATGGTGCTATTCCACGAAATATTCTCTAC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAAGACTTGTTATAGGTaGAGCACTAGAACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: DNRRESTLLIVNLVHSILKTCYR*STRTQK
Trigger: TTTTTGAGTTCTAGTGCTCCACCTATAACAAGTCTT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CCA 90 bp ACAGTTGTATGTGTATTTAGCCAATCTTGTGTAGGTGTAAGGAGACTCAATCATATGACTAAACTCTTTTaGCTACCTCAAACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: TVVCVFSQSCVGVRRLNHMTKLF*LPQTLA
Trigger: TGCTAGAGTTTGAGGTAGCCAAAAGAGTTTAGTCAT...ATGATTGAGTCTCCTTACACCTACACAAGATTGGCTAAATACACATACAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR TCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAGTGAGAAATGGAAACTaGGGACTCATCCTTATTTTT +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTVRNGN*GLILIF
Trigger: AAAAATAAGGATGAGTCCTCAGTTTCCATTTCTCAC...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACACATTTCCACCATGATTaGAAGGTTATTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTHFHHD*KVILPQ
Trigger: TTGTGGAAGAATAACCTTCCAATCATGGTGGAAATG...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAATTTTGTGTGAGAAATaGAAACTGAGGACTCATCCT +
Preference number: 4 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTILCEK*KLRTHP
Trigger: AGGATGAGTCCTCAGTTTCCATTTCTCACACAAAAT...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTAAGACTTGTTATAGGTaGAGCACTAGAACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTKTCYR*STRTQK
Trigger: TTTTTGAGTTCTAGTGCTCCACCTATAACAAGTCTT...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CCA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTGTGAGATAGCAACCTaGATATGGTGTTATAAAAAC +
Preference number: 4 (lower is better)
Translates to: SLVHIALLIQYVKGLLCECEIAT*IWCYKN
Trigger: GTTTTTATAACACCATATCCAGGTTGCTATCTCACA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CCA 90 bp ACAGTTGTATGTGTATTTAGCCAATCTTGTGTAGGTGTAAGGAGACTCAATCATGTTCTAGCCTGTTTTTaGCATCATTCATACTACATT +
Preference number: 4 (lower is better)
Translates to: TVVCVFSQSCVGVRRLNHVLACF*HHSYYI
Trigger: AATGTAGTATGAATGATGCCAAAAACAGGCTAGAAC...ATGATTGAGTCTCCTTACACCTACACAAGATTGGCTAAATACACATACAACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS CCA 90 bp AGGCACCTCCGCAGGGCTGGTATGGAAATTCTTCCACCTGGTGCCTaGGCGCAGCCAACTCTTCCAGTCCCCTGCGCCTCCCGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: RHLRRAGMEILPPGA*AQPTLPVPCASRAL
Trigger: GAGGGCTCGGGAGGCGCAGGGGACTGGAAGAGTTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGAGGTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS GCA 90 bp ACAGAGGCACCTCCGCAGGGCTGGTATGGAAATTCTTCCACCTGGTaGCTGGGCGCAGCCAACTCTTCCAGTCCCCTGCGCCTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: TEAPPQGWYGNSSTW*LGAANSSSPLRLPS
Trigger: GCTCGGGAGGCGCAGGGGACTGGAAGAGTTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGAGGTGCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS CCA 90 bp AGCCCTCCGCCCGCCCCGCCGGGCCTCACCTGTGTAATTACCCTCTaGCTAGCCTTCCTGCGGCAACCGCGGCCAAGTTTACACAGAAAC +
Preference number: 5 (lower is better)
Translates to: SPPPAPPGLTCVITL*LAFLRQPRPSLHRN
Trigger: GTTTCTGTGTAAACTTGGCCGCGGTTGCCGCAGGAAGGCTAGCCAGAGGGTAATTACACAGGTGAGGCCCGGCGGGGCGGGCGGAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS CCA 90 bp GAAACAGAGGCACCTCCGCAGGGCTGGTATGGAAATTCTTCCACCTaGTGCCTGGGCGCAGCCAACTCTTCCAGTCCCCTGCGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: ETEAPPQGWYGNSST*CLGAANSSSPLRLP
Trigger: CGGGAGGCGCAGGGGACTGGAAGAGTTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGAGGTGCCTCTGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS CCA 90 bp TACAAAAACGCCTCTGGAAACAGAGGCACCTCCGCAGGGCTGGTATaGAAATTCTTCCACCTGGTGCCTGGGCGCAGCCAACTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: YKNASGNRGTSAGLV*KFFHLVPGRSQLFQ
Trigger: CTGGAAGAGTTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGAGGTGCCTCTGTTTCCAGAGGCGTTTTTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS CCA 90 bp CTTCGTACAAAAACGCCTCTGGAAACAGAGGCACCTCCGCAGGGCTaGTATGGAAATTCTTCCACCTGGTGCCTGGGCGCAGCCAACTCT +
Preference number: 5 (lower is better)
Translates to: LRTKTPLETEAPPQG*YGNSSTWCLGAANS
Trigger: AGAGTTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGAGGTGCCTCTGTTTCCAGAGGCGTTTTTGTACGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS TCA 90 bp AGTGCTGTGAAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCGAGCGCCGCGT +
Preference number: 5 (lower is better)
Translates to: SAVKCTCGFFQQARR*FYGFCFAFKMRAPR
Trigger: ACGCGGCGCTCGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561543.5
ENST00000619572.5
CDS TCA 90 bp AGTGCTGTGAAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCCAGCGCCTCTG +
Preference number: 5 (lower is better)
Translates to: SAVKCTCGFFQQARR*FYGFCFAFKMPAPL
Trigger: CAGAGGCGCTGGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566768.5
CDS GCA 90 bp GGCACTCGGTCTGGCTTCATTTTCACATCCAATTTTCGCCCAGAGTaGTGTGAAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: GTRSGFIFTSNFRPE*CEMHLWVLSTGSPL
Trigger: CAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACTCTGGGCGAAAATTGGATGTGAAAATGAAGCCAGACCGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399202.8
CDS TCA 90 bp AGTGCTGTGAAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCAACTCCCAACC +
Preference number: 5 (lower is better)
Translates to: SAVKCTCGFFQQARR*FYGFCFAFKMQLPT
Trigger: GGTTGGGAGTTGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399202.8
ENST00000562135.5
CDS GCA 90 bp GTATCTCGGTCTGGCTTCATTTTCACATCCAATTTTCGCCCAGAGTaGTGTGAAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: VSRSGFIFTSNFRPE*CEMHLWVLSTGSPL
Trigger: CAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACTCTGGGCGAAAATTGGATGTGAAAATGAAGCCAGACCGAGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000561490.5
ENST00000561543.5
ENST00000562135.5
ENST00000566768.5
ENST00000568863.1
ENST00000619572.5
CDS GCA 90 bp GTTTCTCGGTCTGGCTTCATTTTCACATCCAATTTTCGCCCAGAGTaGTGTGAAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: VSRSGFIFTSNFRPE*CEMHLWVLSTGSPL
Trigger: CAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACTCTGGGCGAAAATTGGATGTGAAAATGAAGCCAGACCGAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS TCA 90 bp TCGGTCTGGCTTCATTTTCACATCCAATTTTCGCCCAGAGTGCTGTaGAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTGATTCT +
Preference number: 5 (lower is better)
Translates to: SVWLHFHIQFSPRVL*NAPVGSFNRLAADS
Trigger: AGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACTCTGGGCGAAAATTGGATGTGAAAATGAAGCCAGACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000561490.5
ENST00000561543.5
ENST00000562135.5
ENST00000562351.2
ENST00000566768.5
ENST00000568863.1
ENST00000619572.5
CDS TCA 90 bp AGTGCTGTGAAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCCCTTCGTACAA +
Preference number: 5 (lower is better)
Translates to: SAVKCTCGFFQQARR*FYGFCFAFKMPFVQ
Trigger: TTGTACGAAGGGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS TCA 90 bp AGTGCTGTGAAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCTGAAAGAGACA +
Preference number: 5 (lower is better)
Translates to: SAVKCTCGFFQQARR*FYGFCFAFKMLKET
Trigger: TGTCTCTTTCAGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568863.1
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACCTAGTTCGTCTGGCTaGGCGGCACTGGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILPSSSG*AALGQL
Trigger: AAGCTGGCCCAGTGCCGCCAAGCCAGACGAACTAGG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCCTAGTTCGTCTGGCTaGGCGGCACTGGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEPSSSG*AALGQL
Trigger: AAGCTGGCCCAGTGCCGCCAAGCCAGACGAACTAGG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS GCA 90 bp AACACTTTAGATGCAACCGAACTGGAGTCATGCATGTTGAATGACTaGCGGGGGATATGTGATGCTGTTGGATCAATGTGCTCCAAGTGT +
Preference number: 5 (lower is better)
Translates to: NTLDATELESCMLND*RGICDAVGSMCSKC
Trigger: ACACTTGGAGCACATTGATCCAACAGCATCACATATCCCCCGGCAGTCATTCAACATGCATGACTCCAGTTCGGTTGCATCTAAAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS-3UTR CAA 90 bp AGAATGACACTTCAACTGGAAGAGTCAAATGTGTGGGGCAGAAAGCACCACTTGTTTGAGGAACAGGGCTaGAAAGAAGAGGCAATCCAG +
Preference number: 5 (lower is better)
Translates to: RMTLQLEESNVWGRKHHLFEEQG*KEEAIQ
Trigger: CTGGATTGCCTCTTCTTTCAAGCCCTGTTCCTCAAA...CAAGTGGTGCTTTCTGCCCCACACATTTGACTCTTCCAGTTGAAGTGTCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570204.1
CDS-3UTR CAA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATCGGCACTGGGCCAGCTaGTCACTACATTCATGTTTG +
Preference number: 5 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYRHWAS*SLHSCL
Trigger: CAAACATGAATGTAGTGACAAGCTGGCCCAGTGCCG...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACTGGAGTCATGCATGTaGAATGACTGCCGGGGGATA +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTILESCM*NDCRGI
Trigger: TATCCCCCGGCAGTCATTCAACATGCATGACTCCAG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS GCA 90 bp TCATATGAACTCCTAAACACTTTAGATGCAACCGAACTGGAGTCATaGATGTTGAATGACTGCCGGGGGATATGTGATGCTGTTGGATCA +
Preference number: 5 (lower is better)
Translates to: SYELLNTLDATELES*MLNDCRGICDAVGS
Trigger: TGATCCAACAGCATCACATATCCCCCGGCAGTCATTCAACATGCATGACTCCAGTTCGGTTGCATCTAAAGTGTTTAGGAGTTCATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACGGCACTGGGCCAGCTaGTCACTACATTCATGTTTG +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILRHWAS*SLHSCL
Trigger: CAAACATGAATGTAGTGACAAGCTGGCCCAGTGCCG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATGCCATGGTCCAAGTTaGTTTGCTACACAGACGCTG +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTICHGPS*FATQTL
Trigger: CAGCGTCTGTGTAGCAAACAAACTTGGACCATGGCA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACTGGAGTCATGCATGTaGAATGACTGCCGGGGGATA +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLESCM*NDCRGI
Trigger: TATCCCCCGGCAGTCATTCAACATGCATGACTCCAG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAACAAATGTTCAGCGTaGGGTGCTGATCCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILNKCSA*GADPAS
Trigger: GGAAGCGGGATCAGCACCCAACGCTGAACATTTGTT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS-3UTR CAA 90 bp ACAGTTGTATGTGTATTTAGCCAATCTTGTGTAGGTGTAAGGAGACTCAATCATGGGTCGATAGGGATGTaGTCATGGGGGAGCAATGTG +
Preference number: 5 (lower is better)
Translates to: TVVCVFSQSCVGVRRLNHGSIGM*SWGSNV
Trigger: CACATTGCTCCCCCATGACAACATCCCTATCGACCC...ATGATTGAGTCTCCTTACACCTACACAAGATTGGCTAAATACACATACAACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS GCA 90 bp CGAGGAACTGGCTCCAAGATCCATCTTTCTAATAATAATGCATCTTaGTTAATCGCAGGATCATTTAGATCAATTCCCTCTGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RGTGSKIHLSNNNAS*LIAGSFRSIPSVVG
Trigger: GCCCACCACAGAGGGAATTGATCTAAATGATCCTGCGATTAAGCAAGATGCATTATTATTAGAAAGATGGATCTTGGAGCCAGTTCCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000562135.5
ENST00000619572.5
CDS CCA 90 bp CAAAGTACTGAACACACTGAGGTCAAAGGTCATACAAAGGCTTGTTaGATTAGATCAAATCCTGGGTATGAGGAGCAAGCCTTAGCTAGA +
Preference number: 5 (lower is better)
Translates to: QSTEHTEVKGHTKAC*IRSNPGYEEQALAR
Trigger: TCTAGCTAAGGCTTGCTCCTCATACCCAGGATTTGATCTAATCCAACAAGCCTTTGTATGACCTTTGACCTCAGTGTGTTCAGTACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566948.5
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGCCATGGTCCAAGTTaGTTTGCTACACAGACGCTG +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILCHGPS*FATQTL
Trigger: CAGCGTCTGTGTAGCAAACAAACTTGGACCATGGCA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATTTGAGGAACAGGGCTaGAAAGAAGAGGCAATCCAG +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIFEEQG*KEEAIQ
Trigger: CTGGATTGCCTCTTCTTTCAAGCCCTGTTCCTCAAA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS TCA 90 bp AAAGGAAGTTGCCTTCTGGCTATCAATAGCTATACTATCAGTAACTaGGGGATCCAGATGTCTGCAGCGGTTAAAACAAATGTTCAGCGT +
Preference number: 5 (lower is better)
Translates to: KGSCLLAINSYTISN*GIQMSAAVKTNVQR
Trigger: ACGCTGAACATTTGTTTTAACCGCTGCAGACATCTGGATCCCTCAGTTACTGATAGTATAGCTATTGATAGCCAGAAGGCAACTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS TCA 90 bp AAGAGATCAATGCCTAGACCAAAAGGAATGATGCCTTCTCTGCCCTaGCATCTGTCAGACTATATTTCTGCTTTGTGTGGTCATCTCATT +
Preference number: 5 (lower is better)
Translates to: KRSMPRPKGMMPSLP*HLSDYISALCGHLI
Trigger: AATGAGATGACCACACAAAGCAGAAATATAGTCTGACAGATGTCAGGGCAGAGAAGGCATCATTCCTTTTGGTCTAGGCATTGATCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566948.5
CDS GCA 90 bp CTTGTCACTACATTCATGTTTGGTAGTTACTGGGTAACAAGACTGTaGTGGAGGGCAATGAAAGCTTTCTGTTCGACCTTTTACAGAACA +
Preference number: 5 (lower is better)
Translates to: LVTTFMFGSYWVTRL*WRAMKAFCSTFYRT
Trigger: TGTTCTGTAAAAGGTCGAACAGAAAGCTTTCATTGCCCTCCAGCACAGTCTTGTTACCCAGTAACTACCAAACATGAATGTAGTGACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
ENST00000561490.5
ENST00000561543.5
ENST00000562135.5
ENST00000566768.5
ENST00000568863.1
ENST00000619572.5
CDS CCA 90 bp GTCACTACATTCATGTTTGGTAGTTACTGGGTAACAAGACTGTGCTaGAGGGCAATGAAAGCTTTCTGTTCGACCTTTTACAGAACATTC +
Preference number: 5 (lower is better)
Translates to: VTTFMFGSYWVTRLC*RAMKAFCSTFYRTF
Trigger: GAATGTTCTGTAAAAGGTCGAACAGAAAGCTTTCATTGCCCTCCAGCACAGTCTTGTTACCCAGTAACTACCAAACATGAATGTAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
ENST00000561490.5
ENST00000561543.5
ENST00000562135.5
ENST00000566768.5
ENST00000568863.1
ENST00000619572.5
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAGACGCTGTGAACTGTTaGTACCACATTGTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIDAVNC*YHIVLL
Trigger: AAGCAGAACAATGTGGTACAAACAGTTCACAGCGTC...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATATGGTCCAAGTTTGTTaGCTACACAGACGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYMVQVC*LHRRCE
Trigger: TTCACAGCGTCTGTGTAGCAAACAAACTTGGACCAT...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAGACTTGGGCCACTTTTaGCATGTAACACACTTTCAG +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIDLGHF*HVTHFQ
Trigger: CTGAAAGTGTGTTACATGCAAAAAGTGGCCCAAGTC...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAGATGAAAGGCTCTGGTaGAAGTTCCATCCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIDERLW*KFHPRN
Trigger: ATTCCTTGGATGGAACTTCAACCAGAGCCTTTCATC...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAAGAGGCAATCCAGTTaGAGGATGAAAGGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILKRQSS*RMKGSG
Trigger: ACCAGAGCCTTTCATCCTCAAACTGGATTGCCTCTT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATTTGAGGAACAGGGCTaGAAAGAAGAGGCAATCCAG +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILFEEQG*KEEAIQ
Trigger: CTGGATTGCCTCTTCTTTCAAGCCCTGTTCCTCAAA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp TCACACCCATATAAGGAGAGGGAGCATTGTCATCTGAAACACTGTAGAATGACAATAAGGTCACTTGTATaGTTCCTGAAGGAGGTACTC +
Preference number: 5 (lower is better)
Translates to: SHPYKEREHCHLKHCRMTIRSLV*FLKEVL
Trigger: GAGTACCTCCTTCAGGAACAATACAAGTGACCTTAT...TGTCATTCTACAGTGTTTCAGATGACAATGCTCCCTCTCCTTATATGGGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570204.1
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACACATACCACTTGTATaGTTCCTGAAGGAGGTACTC +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIHIPLV*FLKEVL
Trigger: GAGTACCTCCTTCAGGAACAATACAAGTGGTATGTG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp AGAGAGGAAACATCAGTAAGACCTCATAAACTGAGTGCCTCAATTGAAGCTCGCGGTAGAGTGACACAGTaGTATGTGTATTTAGCCAAT +
Preference number: 5 (lower is better)
Translates to: REETSVRPHKLSASIEARGRVTQ*YVYLAN
Trigger: ATTGGCTAAATACACATACAACTGTGTCACTCTACC...GCGAGCTTCAATTGAGGCACTCAGTTTATGAGGTCTTACTGATGTTTCCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CAA 90 bp AGAGACGTACAGCCAAAATTCATATACATCACAGGCTGCCACCACTCAATTCTATCCAGGAGCAGTAGCTaGTTTACCAAATCTAAGATC +
Preference number: 5 (lower is better)
Translates to: RDVQPKFIYITGCHHSILSRSSS*FTKSKI
Trigger: GATCTTAGATTTGGTAAACAAGCTACTGCTCCTGGA...TAGAATTGAGTGGTGGCAGCCTGTGATGTATATGAATTTTGGCTGTACGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGACGCTGTGAACTGTTaGTACCACATTGTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILDAVNC*YHIVLL
Trigger: AAGCAGAACAATGTGGTACAAACAGTTCACAGCGTC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAATGGTCCAAGTTTGTTaGCTACACAGACGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILMVQVC*LHRRCE
Trigger: TTCACAGCGTCTGTGTAGCAAACAAACTTGGACCAT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACATGCCATGGTCCAAGTTaGTTTGCTACACAGACGCTG +
Preference number: 5 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTCHGPS*FATQTL
Trigger: CAGCGTCTGTGTAGCAAACAAACTTGGACCATGGCA...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGACTTGGGCCACTTTTaGCATGTAACACACTTTCAG +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILDLGHF*HVTHFQ
Trigger: CTGAAAGTGTGTTACATGCAAAAAGTGGCCCAAGTC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAAATGTGCTCCAAGTGTaGAGCAATCCTTGCAATAAC +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTINVLQV*SNPCNN
Trigger: GTTATTGCAAGGATTGCTCAACACTTGGAGCACATT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGGATATGTGATGCTGTaGGATCAATGTGCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILGYVML*DQCAPS
Trigger: ACTTGGAGCACATTGATCCAACAGCATCACATATCC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGATGAAAGGCTCTGGTaGAAGTTCCATCCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILDERLW*KFHPRN
Trigger: ATTCCTTGGATGGAACTTCAACCAGAGCCTTTCATC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGTTTGAGGAACAGGGCTaGAAAGAAGAGGCAATCCAG +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEFEEQG*KEEAIQ
Trigger: CTGGATTGCCTCTTCTTTCAAGCCCTGTTCCTCAAA...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAGTGAAAACTGAGGGTTaGTTGGTGATTCAGTGTAAG +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIVKTEG*LVIQCK
Trigger: CTTACACTGAATCACCAACAAACCCTCAGTTTTCAC...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS TCA 90 bp TGTGATTTTATATCACCTATACCACTAAAGCCTAGAATATTGGCTTaGGATGTCCCATGGTCAGATTTACTGCCAGTGCCTGGATATAGT +
Preference number: 5 (lower is better)
Translates to: CDFISPIPLKPRILA*DVPWSDLLPVPGYS
Trigger: ACTATATCCAGGCACTGGCAGTAAATCTGACCATGGGACATCTCAAGCCAATATTCTAGGCTTTAGTGGTATAGGTGATATAAAATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS TCA 90 bp AATATTCATCCAGAGTATCTTCTCTGTGAAGCCCTTTGTTTCCACTaGAAACCATACTGGAATCCTTGTATAAAGGAAGTTGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: NIHPEYLLCEALCFH*KPYWNPCIKEVAFW
Trigger: CCAGAAGGCAACTTCCTTTATACAAGGATTCCAGTATGGTTTTCAGTGGAAACAAAGGGCTTCACAGAGAAGATACTCTGGATGAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAACTGTTTGTACCACATaGTTCTGCTTCATTTGGGTT +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTITVCTT*FCFIWV
Trigger: AACCCAAATGAAGCAGAACAATGTGGTACAAACAGT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGACGCTGTGAACTGTTaGTACCACATTGTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEDAVNC*YHIVLL
Trigger: AAGCAGAACAATGTGGTACAAACAGTTCACAGCGTC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGGACTTGGGCCACTTTTaGCATGTAACACACTTTCAG +
Preference number: 5 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRDLGHF*HVTHFQ
Trigger: CTGAAAGTGTGTTACATGCAAAAAGTGGCCCAAGTC...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACAGTATATTCTGGACTaGGGCCACTTTTTGCATGTA +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILQYILD*GHFLHV
Trigger: TACATGCAAAAAGTGGCCCAAGTCCAGAATATACTG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAGTGCCTGGATATAGTTaGATATTTTTGACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIVPGYS*IFLTAA
Trigger: TGCAGCTGTCAAAAATATCAAACTATATCCAGGCAC...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp GTCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGATGTATGTGCCTGGATATAGTTaGATATTTTTGACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: VSMEVDLSRFRTLEPQMYVPGYS*IFLTAA
Trigger: TGCAGCTGTCAAAAATATCAAACTATATCCAGGCAC...ATACATCTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAATGTGCTCCAAGTGTaGAGCAATCCTTGCAATAAC +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILNVLQV*SNPCNN
Trigger: GTTATTGCAAGGATTGCTCAACACTTGGAGCACATT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGGGATATGTGATGCTGTaGGATCAATGTGCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEGYVML*DQCAPS
Trigger: ACTTGGAGCACATTGATCCAACAGCATCACATATCC...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp ACACTTCTCTTCACTTCTTGTTTAACAGGTACAGAAAAAGTTCTTTGTCGTAGGGGATATGTGATGCTGTaGGATCAATGTGCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: TLLFTSCLTGTEKVLCRRGYVML*DQCAPS
Trigger: ACTTGGAGCACATTGATCCAACAGCATCACATATCC...CCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACTCCTGATACGTACTTaGGATGATTTCACTAGGATT +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTILLIRT*DDFTRI
Trigger: AATCCTAGTGAAATCATCCAAAGTACGTATCAGGAG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAAAGAGGCAATCCAGTTaGAGGATGAAAGGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTKRQSS*RMKGSG
Trigger: ACCAGAGCCTTTCATCCTCAAACTGGATTGCCTCTT...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAATAAGGTCACTTGTATaGTTCCTGAAGGAGGTACTC +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILIRSLV*FLKEVL
Trigger: GAGTACCTCCTTCAGGAACAATACAAGTGACCTTAT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000546305.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGTGAAAACTGAGGGTTaGTTGGTGATTCAGTGTAAG +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILVKTEG*LVIQCK
Trigger: CTTACACTGAATCACCAACAAACCCTCAGTTTTCAC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATACTCCTGATTGTTAATTaGGTACACTCCATTCTATGC +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTILLIVN*VHSILC
Trigger: GCATAGAATGGAGTGTACCAAATTAACAATCAGGAG...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp AGAGACGTACAGCCAAAATTCATATACATCACAGGCTGCCACCACTCAATTCTAGAGAGAACATACTCATaGACTGTGTGTTTAGTAAGT +
Preference number: 5 (lower is better)
Translates to: RDVQPKFIYITGCHHSILERTYS*TVCLVS
Trigger: ACTTACTAAACACACAGTCAATGAGTATGTTCTCTC...TAGAATTGAGTGGTGGCAGCCTGTGATGTATATGAATTTTGGCTGTACGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CAA 90 bp AGAGACGTACAGCCAAAATTCATATACATCACAGGCTGCCACCACTCAATTCTACTATTTCACATTGGTTaGCTTCCAAGTGATATGACT +
Preference number: 5 (lower is better)
Translates to: RDVQPKFIYITGCHHSILLFHIG*LPSDMT
Trigger: AGTCATATCACTTGGAAGCAAACCAATGTGAAATAG...TAGAATTGAGTGGTGGCAGCCTGTGATGTATATGAATTTTGGCTGTACGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGAACTGGATAATTAGATaGTCTGGGCAAGGACTGAAC +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCENWIIR*SGQGLN
Trigger: GTTCAGTCCTTGCCCAGACAATCTAATTATCCAGTT...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAACTGTTTGTACCACATaGTTCTGCTTCATTTGGGTT +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILTVCTT*FCFIWV
Trigger: AACCCAAATGAAGCAGAACAATGTGGTACAAACAGT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCAGTATATTCTGGACTaGGGCCACTTTTTGCATGTA +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEQYILD*GHFLHV
Trigger: TACATGCAAAAAGTGGCCCAAGTCCAGAATATACTG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAGTGCCTGGATATAGTTaGATATTTTTGACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILVPGYS*IFLTAA
Trigger: TGCAGCTGTCAAAAATATCAAACTATATCCAGGCAC...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACTCCTGATACGTACTTaGGATGATTTCACTAGGATT +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLLIRT*DDFTRI
Trigger: AATCCTAGTGAAATCATCCAAAGTACGTATCAGGAG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACTCATTTCTTGCTCCTaGAATCTGCTTGTCAAATCT +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLISCS*NLLVKS
Trigger: AGATTTGACAAGCAGATTCAAGGAGCAAGAAATGAG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATATGTTTATCAATTCCATaGCTCATTTCTTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTICLSIP*LISCSL
Trigger: CAAGGAGCAAGAAATGAGCAATGGAATTGATAAACA...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp TGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTTCTTGTTTAACAGGTACAGATGAAAGGCTCTGGTaGAAGTTCCATCCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: CRMFSLLTLLFTSCLTGTDERLW*KFHPRN
Trigger: ATTCCTTGGATGGAACTTCAACCAGAGCCTTTCATC...TGTACCTGTTAAACAAGAAGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGATAAGGTCACTTGTATaGTTCCTGAAGGAGGTACTC +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEIRSLV*FLKEVL
Trigger: GAGTACCTCCTTCAGGAACAATACAAGTGACCTTAT...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261844.11
CDS-3UTR CAA 90 bp ACTTGCAAAGGGAAAGTGAAGCAGCTTAGTCCACATTGCACTGCTAATACAATAAAAACTGAGGGTTTGTaGGTGATTCAGTGTAAGATT +
Preference number: 5 (lower is better)
Translates to: TCKGKVKQLSPHCTANTIKTEGL*VIQCKI
Trigger: AATCTTACACTGAATCACCAACAAACCCTCAGTTTT...TATTGTATTAGCAGTGCAATGTGGACTAAGCTGCTTCACTTTCCCTTTGCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTACTCCTGATTGTTAATTaGGTACACTCCATTCTATGC +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILLLIVN*VHSILC
Trigger: GCATAGAATGGAGTGTACCAAATTAACAATCAGGAG...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCATGATGATCTGAACTaGCAAAGGGAAAGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEHDDLN*QRESEA
Trigger: TGCTTCACTTTCCCTTTGCAAGTTCAGATCATCATG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTCATGATGATCTGAACTaGCAAAGGGAAAGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTHDDLN*QRESEA
Trigger: TGCTTCACTTTCCCTTTGCAAGTTCAGATCATCATG...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAACCATACTGGAATCCTaGTATAAAGGAAGTTGCCTT +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILTILES*YKGSCL
Trigger: AAGGCAACTTCCTTTATACAAGGATTCCAGTATGGT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS CCA 90 bp TTTCTCATAAAGGCCAATATTAGTGTGAATACTGCACGTCAAAACTaGATAATTAGATTGTCTGGGCAAGGACTGAACACTGACTTTCAA +
Preference number: 5 (lower is better)
Translates to: FLIKANISVNTARQN*IIRLSGQGLNTDFQ
Trigger: TTGAAAGTCAGTGTTCAGTCCTTGCCCAGACAATCTAATTATCCAGTTTTGACGTGCAGTATTCACACTAATATTGGCCTTTATGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS-3UTR CAA 90 bp AATAACCGTTCTTCTGTGTGTCGGATGTTCTCTTTATTAACACTTCTCTTCACTACTGTTTGTACCACATaGTTCTGCTTCATTTGGGTT +
Preference number: 5 (lower is better)
Translates to: NNRSSVCRMFSLLTLLFTTVCTT*FCFIWV
Trigger: AACCCAAATGAAGCAGAACAATGTGGTACAAACAGT...AGTGAAGAGAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCTCCTGATACGTACTTaGGATGATTTCACTAGGATT +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCELLIRT*DDFTRI
Trigger: AATCCTAGTGAAATCATCCAAAGTACGTATCAGGAG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGCTCATTTCTTGCTCCTaGAATCTGCTTGTCAAATCT +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCELISCS*NLLVKS
Trigger: AGATTTGACAAGCAGATTCAAGGAGCAAGAAATGAG...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTATGTTTATCAATTCCATaGCTCATTTCTTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILCLSIP*LISCSL
Trigger: CAAGGAGCAAGAAATGAGCAATGGAATTGATAAACA...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp GATAACAGGAGAGAATCCACTCTCCTGATTGTTAATTTGGTACACTCCATTCTAAAAACTGAGGGTTTGTaGGTGATTCAGTGTAAGATT +
Preference number: 5 (lower is better)
Translates to: DNRRESTLLIVNLVHSILKTEGL*VIQCKI
Trigger: AATCTTACACTGAATCACCAACAAACCCTCAGTTTT...TAGAATGGAGTGTACCAAATTAACAATCAGGAGAGTGGATTCTCTCCTGTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
CDS-3UTR CAA 90 bp ACAAACCATCAAACATGCATGCTCCCTTCCCATTCAAACTCAAAATATAGGAGATGTTCTAGCCTGTTTTaGGCATCATTCATACTACAT +
Preference number: 5 (lower is better)
Translates to: TNHQTCMLPSHSNSKYRRCSSLF*ASFILH
Trigger: ATGTAGTATGAATGATGCCAAAAACAGGCTAGAACA...TCTCCTATATTTTGAGTTTGAATGGGAAGGGAGCATGCATGTTTGATGGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562351.2
CDS-3UTR CAA 90 bp AGCTTAGTCCACATTGCACTGCTAATACAATATGTTAAAGGACTACTATGTGAGAAAACTGAGGGTTTGTaGGTGATTCAGTGTAAGATT +
Preference number: 5 (lower is better)
Translates to: SLVHIALLIQYVKGLLCEKTEGL*VIQCKI
Trigger: AATCTTACACTGAATCACCAACAAACCCTCAGTTTT...CTCACATAGTAGTCCTTTAACATATTGTATTAGCAGTGCAATGTGGACTAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000534964.6
CDS GCA 72 bp CCCGTAGCCCCGGCCGGCCCTCTTGCCCAGCGCCTCTaGCAGCTCCTTGCCCGCCCGCTGTCTCTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: PVAPAGPLAQRL*QLLARPLSLAL
Trigger: CAGAGCTAGAGACAGCGGGCGGGCAAGGAGCTGGCAGAGGCGCTGGGCAAGAGGGCCGGCCGGGGCTACGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561543.5
ENST00000619572.5
CDS CCA 72 bp CCCGCCCCGCCGGGCCTCACCTGTGTAATTACCCTCTaGCTAGCCTTCCTGCGGCAACCGCGGCCAAGTTTA +
Preference number: 6 (lower is better)
Translates to: PAPPGLTCVITL*LAFLRQPRPSL
Trigger: TAAACTTGGCCGCGGTTGCCGCAGGAAGGCTAGCCAGAGGGTAATTACACAGGTGAGGCCCGGCGGGGCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534964.6
CDS CCA 72 bp CTCGCTCTCCTCTCCCGTCCCAATCCCGCCTCCTCTTaGCACTTCTCTCCACCGCTCGCCCAGCAGCTCACA +
Preference number: 6 (lower is better)
Translates to: LALLSRPNPASS*HFSPPLAQQLT
Trigger: TGTGAGCTGCTGGGCGAGCGGTGGAGAGAAGTGCCAAGAGGAGGCGGGATTGGGACGGGAGAGGAGAGCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561543.5
ENST00000619572.5
CDS GCA 72 bp CCTCCGCAGGGCTGGTATGGAAATTCTTCCACCTGGTaGCTGGGCGCAGCCAACTCTTCCAGTCCCCTGCGC +
Preference number: 6 (lower is better)
Translates to: PPQGWYGNSSTW*LGAANSSSPLR
Trigger: GCGCAGGGGACTGGAAGAGTTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS CCA 72 bp CGCAGGGCTGGTATGGAAATTCTTCCACCTGGTGCCTaGGCGCAGCCAACTCTTCCAGTCCCCTGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: RRAGMEILPPGA*AQPTLPVPCAS
Trigger: GGAGGCGCAGGGGACTGGAAGAGTTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCCATACCAGCCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS CCA 72 bp GCACCTCCGCAGGGCTGGTATGGAAATTCTTCCACCTaGTGCCTGGGCGCAGCCAACTCTTCCAGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: APPQGWYGNSST*CLGAANSSSPL
Trigger: CAGGGGACTGGAAGAGTTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS CCA 72 bp GCCTCTGGAAACAGAGGCACCTCCGCAGGGCTGGTATaGAAATTCTTCCACCTGGTGCCTGGGCGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: ASGNRGTSAGLV*KFFHLVPGRSQ
Trigger: TTGGCTGCGCCCAGGCACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGAGGTGCCTCTGTTTCCAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS CCA 72 bp AAAACGCCTCTGGAAACAGAGGCACCTCCGCAGGGCTaGTATGGAAATTCTTCCACCTGGTGCCTGGGCGCA +
Preference number: 6 (lower is better)
Translates to: KTPLETEAPPQG*YGNSSTWCLGA
Trigger: TGCGCCCAGGCACCAGGTGGAAGAATTTCCATACCAGCCCTGCGGAGGTGCCTCTGTTTCCAGAGGCGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS TCA 72 bp AAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCCC +
Preference number: 6 (lower is better)
Translates to: KCTCGFFQQARR*FYGFCFAFKMP
Trigger: GGGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS CCA 72 bp TTCGCTTTCAAAATGCCCTTCGTACAAAAACGCCTCTaGAAACAGAGGCACCTCCGCAGGGCTGGTATGGAA +
Preference number: 6 (lower is better)
Translates to: FAFKMPFVQKRL*KQRHLRRAGME
Trigger: TTCCATACCAGCCCTGCGGAGGTGCCTCTGTTTCCAGAGGCGTTTTTGTACGAAGGGCATTTTGAAAGCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534964.6
ENST00000562351.2
CDS TCA 72 bp AAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCTG +
Preference number: 6 (lower is better)
Translates to: KCTCGFFQQARR*FYGFCFAFKML
Trigger: CAGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261844.11
ENST00000568863.1
CDS TCA 72 bp AAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCGA +
Preference number: 6 (lower is better)
Translates to: KCTCGFFQQARR*FYGFCFAFKMR
Trigger: TCGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561543.5
ENST00000619572.5
CDS TCA 72 bp AAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCCA +
Preference number: 6 (lower is better)
Translates to: KCTCGFFQQARR*FYGFCFAFKMP
Trigger: TGGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566768.5
CDS GCA 72 bp GATGCAACCGAACTGGAGTCATGCATGTTGAATGACTaGCGGGGGATATGTGATGCTGTTGGATCAATGTGC +
Preference number: 6 (lower is better)
Translates to: DATELESCMLND*RGICDAVGSMC
Trigger: GCACATTGATCCAACAGCATCACATATCCCCCGGCAGTCATTCAACATGCATGACTCCAGTTCGGTTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS TCA 72 bp CTTCATTTTCACATCCAATTTTCGCCCAGAGTGCTGTaGAATGCACCTGTGGGTTCTTTCAACAGGCTCGCC +
Preference number: 6 (lower is better)
Translates to: LHFHIQFSPRVL*NAPVGSFNRLA
Trigger: GGCGAGCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACTCTGGGCGAAAATTGGATGTGAAAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000561490.5
ENST00000561543.5
ENST00000562135.5
ENST00000562351.2
ENST00000566768.5
ENST00000568863.1
ENST00000619572.5
CDS TCA 72 bp AAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCAA +
Preference number: 6 (lower is better)
Translates to: KCTCGFFQQARR*FYGFCFAFKMQ
Trigger: TTGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399202.8
ENST00000562135.5
CDS TCA 72 bp AAATGCACCTGTGGGTTCTTTCAACAGGCTCGCCGCTaGTTCTACGGCTTCTGCTTCGCTTTCAAAATGCTA +
Preference number: 6 (lower is better)
Translates to: KCTCGFFQQARR*FYGFCFAFKML
Trigger: TAGCATTTTGAAAGCGAAGCAGAAGCCGTAGAATCAGCGGCGAGCCTGTTGAAAGAACCCACAGGTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561490.5
CDS CAA 90 bp GAACTCCTAAACACTTTAGATGCAACCGAACTGGAGTCATGCATGTaGAATGACTGCCGGGGGATATGTGATGCTGTTGGATCAATGTGC +
Preference number: 6 (lower is better)
Translates to: ELLNTLDATELESCM*NDCRGICDAVGSMC
Trigger: GCACATTGATCCAACAGCATCACATATCCCCCGGCAGTCATTCAACATGCATGACTCCAGTTCGGTTGCATCTAAAGTGTTTAGGAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS GCA 72 bp TCTGGCTTCATTTTCACATCCAATTTTCGCCCAGAGTaGTGTGAAATGCACCTGTGGGTTCTTTCAACAGGC +
Preference number: 6 (lower is better)
Translates to: SGFIFTSNFRPE*CEMHLWVLSTG
Trigger: GCCTGTTGAAAGAACCCACAGGTGCATTTCACAGCACTCTGGGCGAAAATTGGATGTGAAAATGAAGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000561490.5
ENST00000561543.5
ENST00000562135.5
ENST00000562351.2
ENST00000566768.5
ENST00000568863.1
ENST00000619572.5
CDS GCA 72 bp CTCCTAAACACTTTAGATGCAACCGAACTGGAGTCATaGATGTTGAATGACTGCCGGGGGATATGTGATGCT +
Preference number: 6 (lower is better)
Translates to: LLNTLDATELES*MLNDCRGICDA
Trigger: AGCATCACATATCCCCCGGCAGTCATTCAACATGCATGACTCCAGTTCGGTTGCATCTAAAGTGTTTAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS CAA 72 bp AACACTTTAGATGCAACCGAACTGGAGTCATGCATGTaGAATGACTGCCGGGGGATATGTGATGCTGTTGGA +
Preference number: 6 (lower is better)
Translates to: NTLDATELESCM*NDCRGICDAVG
Trigger: TCCAACAGCATCACATATCCCCCGGCAGTCATTCAACATGCATGACTCCAGTTCGGTTGCATCTAAAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS CAA 90 bp GTGCCATGGTCCAAGTTTGTTTGCTACACAGACGCTGTGAACTGTTaGTACCACATTGTTCTGCTTCATTTGGGTTATGGTGCTGATGAG +
Preference number: 6 (lower is better)
Translates to: VPWSKFVCYTDAVNC*YHIVLLHLGYGADE
Trigger: CTCATCAGCACCATAACCCAAATGAAGCAGAACAATGTGGTACAAACAGTTCACAGCGTCTGTGTAGCAAACAAACTTGGACCATGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS CCA 72 bp GAACACACTGAGGTCAAAGGTCATACAAAGGCTTGTTaGATTAGATCAAATCCTGGGTATGAGGAGCAAGCC +
Preference number: 6 (lower is better)
Translates to: EHTEVKGHTKAC*IRSNPGYEEQA
Trigger: GGCTTGCTCCTCATACCCAGGATTTGATCTAATCCAACAAGCCTTTGTATGACCTTTGACCTCAGTGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566948.5
CDS CAA 90 bp AGGCAACATTGTGAGAAACATTGGGAACAGGAAACACATGCTCAATaGGAGTCTGTGAAAAATTCCACTGTAGGTCTACATCAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: RQHCEKHWEQETHAQ*ESVKNSTVGLHQQH
Trigger: GTGCTGCTGATGTAGACCTACAGTGGAATTTTTCACAGACTCCAATTGAGCATGTGTTTCCTGTTCCCAATGTTTCTCACAATGTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS TCA 72 bp ATATCACCTATACCACTAAAGCCTAGAATATTGGCTTaGGATGTCCCATGGTCAGATTTACTGCCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: ISPIPLKPRILA*DVPWSDLLPVP
Trigger: AGGCACTGGCAGTAAATCTGACCATGGGACATCTCAAGCCAATATTCTAGGCTTTAGTGGTATAGGTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS GCA 72 bp ACATTCATGTTTGGTAGTTACTGGGTAACAAGACTGTaGTGGAGGGCAATGAAAGCTTTCTGTTCGACCTTT +
Preference number: 6 (lower is better)
Translates to: TFMFGSYWVTRL*WRAMKAFCSTF
Trigger: AAAGGTCGAACAGAAAGCTTTCATTGCCCTCCAGCACAGTCTTGTTACCCAGTAACTACCAAACATGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
ENST00000561490.5
ENST00000561543.5
ENST00000562135.5
ENST00000566768.5
ENST00000568863.1
ENST00000619572.5
CDS CCA 72 bp TTCATGTTTGGTAGTTACTGGGTAACAAGACTGTGCTaGAGGGCAATGAAAGCTTTCTGTTCGACCTTTTAC +
Preference number: 6 (lower is better)
Translates to: FMFGSYWVTRLC*RAMKAFCSTFY
Trigger: GTAAAAGGTCGAACAGAAAGCTTTCATTGCCCTCCAGCACAGTCTTGTTACCCAGTAACTACCAAACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261844.11
ENST00000534964.6
ENST00000546305.6
ENST00000561490.5
ENST00000561543.5
ENST00000562135.5
ENST00000566768.5
ENST00000568863.1
ENST00000619572.5
CDS CAA 72 bp AGTGTGAATACTGCACGTCAAAACTGGATAATTAGATaGTCTGGGCAAGGACTGAACACTGACTTTCAAGGC +
Preference number: 6 (lower is better)
Translates to: SVNTARQNWIIR*SGQGLNTDFQG
Trigger: GCCTTGAAAGTCAGTGTTCAGTCCTTGCCCAGACAATCTAATTATCCAGTTTTGACGTGCAGTATTCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS CAA 72 bp CTTTCAGTCTGCAAACTCTGTAATAGATTTGAGGGCTaGCAGGATTACGCTGGGTCAGATCTAGAGTTAACT +
Preference number: 6 (lower is better)
Translates to: LSVCKLCNRFEG*QDYAGSDLELT
Trigger: AGTTAACTCTAGATCTGACCCAGCGTAATCCTGCAAGCCCTCAAATCTATTACAGAGTTTGCAGACTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566948.5
CDS TCA 72 bp TGCCTTCTGGCTATCAATAGCTATACTATCAGTAACTaGGGGATCCAGATGTCTGCAGCGGTTAAAACAAAT +
Preference number: 6 (lower is better)
Translates to: CLLAINSYTISN*GIQMSAAVKTN
Trigger: ATTTGTTTTAACCGCTGCAGACATCTGGATCCCTCAGTTACTGATAGTATAGCTATTGATAGCCAGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS CAA 72 bp TCCAAGTTTGTTTGCTACACAGACGCTGTGAACTGTTaGTACCACATTGTTCTGCTTCATTTGGGTTATGGT +
Preference number: 6 (lower is better)
Translates to: SKFVCYTDAVNC*YHIVLLHLGYG
Trigger: ACCATAACCCAAATGAAGCAGAACAATGTGGTACAAACAGTTCACAGCGTCTGTGTAGCAAACAAACTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS CAA 72 bp AGCCCTTTGTTTCCACTGAAAACCATACTGGAATCCTaGTATAAAGGAAGTTGCCTTCTGGCTATCAATAGC +
Preference number: 6 (lower is better)
Translates to: SPLFPLKTILES*YKGSCLLAINS
Trigger: GCTATTGATAGCCAGAAGGCAACTTCCTTTATACAAGGATTCCAGTATGGTTTTCAGTGGAAACAAAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS CAA 90 bp GCCAATATTAGTGTGAATACTGCACGTCAAAACTGGATAATTAGATaGTCTGGGCAAGGACTGAACACTGACTTTCAAGGCAACATTGTG +
Preference number: 6 (lower is better)
Translates to: ANISVNTARQNWIIR*SGQGLNTDFQGNIV
Trigger: CACAATGTTGCCTTGAAAGTCAGTGTTCAGTCCTTGCCCAGACAATCTAATTATCCAGTTTTGACGTGCAGTATTCACACTAATATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS CAA 90 bp CTAGACTCTCTTTCAGTCTGCAAACTCTGTAATAGATTTGAGGGCTaGCAGGATTACGCTGGGTCAGATCTAGAGTTAACTCAATTTCAA +
Preference number: 6 (lower is better)
Translates to: LDSLSVCKLCNRFEG*QDYAGSDLELTQFQ
Trigger: TTGAAATTGAGTTAACTCTAGATCTGACCCAGCGTAATCCTGCAAGCCCTCAAATCTATTACAGAGTTTGCAGACTGAAAGAGAGTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566948.5
CDS TCA 72 bp GGACGTCCAGAAACATGTGAAGTGCTTGGATCACAATaGATCAAATGTTGGGCAATTCTTGCAATGATTTCT +
Preference number: 6 (lower is better)
Translates to: GRPETCEVLGSQ*IKCWAILAMIS
Trigger: AGAAATCATTGCAAGAATTGCCCAACATTTGATTCATTGTGATCCAAGCACTTCACATGTTTCTGGACGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS TCA 72 bp AGACTCTTGAGTATTAAATGGACGTCCAGAAACATGTaGAGTGCTTGGATCACAATGAATCAAATGTTGGGC +
Preference number: 6 (lower is better)
Translates to: RLLSIKWTSRNM*SAWITMNQMLG
Trigger: GCCCAACATTTGATTCATTGTGATCCAAGCACTTCACATGTTTCTGGACGTCCATTTAATACTCAAGAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS TCA 72 bp ACCCGGAAAAGTTTTGAATGGAGTGAACTAGACTCTTaGGTATTAAATGGACGTCCAGAAACATGTGAAGTG +
Preference number: 6 (lower is better)
Translates to: TRKSFEWSELDS*VLNGRPETCEV
Trigger: CACTTCACATGTTTCTGGACGTCCATTTAATACTCAAGAGTCTAGTTCACTCCATTCAAAACTTTTCCGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS CCA 72 bp AAGGCCAATATTAGTGTGAATACTGCACGTCAAAACTaGATAATTAGATTGTCTGGGCAAGGACTGAACACT +
Preference number: 6 (lower is better)
Translates to: KANISVNTARQN*IIRLSGQGLNT
Trigger: AGTGTTCAGTCCTTGCCCAGACAATCTAATTATCCAGTTTTGACGTGCAGTATTCACACTAATATTGGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS CAA 72 bp TGTGAGAAACATTGGGAACAGGAAACACATGCTCAATaGGAGTCTGTGAAAAATTCCACTGTAGGTCTACAT +
Preference number: 6 (lower is better)
Translates to: CEKHWEQETHAQ*ESVKNSTVGLH
Trigger: ATGTAGACCTACAGTGGAATTTTTCACAGACTCCAATTGAGCATGTGTTTCCTGTTCCCAATGTTTCTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5
CDS GCA 72 bp CTGAAAACCATACTGGAATCCTTGTATAAAGGAAGTTaGCTTCTGGCTATCAATAGCTATACTATCAGTAAC +
Preference number: 6 (lower is better)
Translates to: LKTILESLYKGS*LLAINSYTISN
Trigger: GTTACTGATAGTATAGCTATTGATAGCCAGAAGGCAACTTCCTTTATACAAGGATTCCAGTATGGTTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546305.6
CDS CAA 72 bp ACACTGTCACTCCTTTACTTCAAGAAATCGGTTTACTaGTGGTATTCTTGTGGTAATTCCTCCTCAAACTTA +
Preference number: 6 (lower is better)
Translates to: TLSLLYFKKSVY*WYSCGNSSSNL
Trigger: TAAGTTTGAGGAGGAATTACCACAAGAATACCACAAGTAAACCGATTTCTTGAAGTAAAGGAGTGACAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566948.5
CDS CAA 90 bp GGCAAGAGAACACTGTCACTCCTTTACTTCAAGAAATCGGTTTACTaGTGGTATTCTTGTGGTAATTCCTCCTCAAACTTATATAAATAT +
Preference number: 6 (lower is better)
Translates to: GKRTLSLLYFKKSVY*WYSCGNSSSNLYKY
Trigger: ATATTTATATAAGTTTGAGGAGGAATTACCACAAGAATACCACAAGTAAACCGATTTCTTGAAGTAAAGGAGTGACAGTGTTCTCTTGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566948.5
CDS TCA 72 bp GAAGTTGATAAACTAGAACTTTTGTTCTGTGTCTCCTaGTACGTACTTTGGATGATTTCACTAGGATTGTTC +
Preference number: 6 (lower is better)
Translates to: EVDKLELLFCVS*YVLWMISLGLF
Trigger: GAACAATCCTAGTGAAATCATCCAAAGTACGTATCAGGAGACACAGAACAAAAGTTCTAGTTTATCAACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261844.11
ENST00000399202.8
ENST00000534964.6
ENST00000546305.6
ENST00000619572.5