RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM20C (Homo sapiens)

Ensembl gene IDs: ENSG00000177706

Ensembl transcript IDs: ENST00000313766.6, ENST00000471328.1, ENST00000477004.1, ENST00000512382.1, ENST00000515795.1, ENST00000630666.1, ENST00000632495.1, ENST00000633408.1, ENST00000634108.1, ENST00000672066.1, ENST00000672298.1, ENST00000672379.1, ENST00000673544.1, ENST00000673583.1

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGCACTTGCACCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTaGAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCC +
Preference number: 1 (lower is better)
Translates to: DALAPTVHSQVRGGC*RPAGGLAGRLVIGS
Trigger: GGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR GCA 90 bp CAGGATGCACTTGCACCAACCGTCCACAGCCAAGTCCGAGGTGGGTaGTGCAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGG +
Preference number: 1 (lower is better)
Translates to: QDALAPTVHSQVRGG*CRPAGGLAGRLVIG
Trigger: CCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CCA 90 bp CCTGCCTCTGAATTCACTGAATTCACGACGGGCGCATGCGCTTGCTaGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGCGGC +
Preference number: 1 (lower is better)
Translates to: PASEFTEFTTGACAC*EVRRLCLRPGQRSG
Trigger: GCCGCTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCGTGAATTCAGTGAATTCAGAGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CCA 90 bp TCCGAGGTGGGTGCTGCAGGCCAGCGGGCGGACTCGCAGGACGCCTaGTCATCGGGTCCTCCAAAACCACGTAGGCATCCGTCCACCAGC +
Preference number: 1 (lower is better)
Translates to: SEVGAAGQRADSQDA*SSGPPKPRRHPSTS
Trigger: GCTGGTGGACGGATGCCTACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR GCA 90 bp CGTCCTGCCTCTGAATTCACTGAATTCACGACGGGCGCATGCGCTTaGTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGC +
Preference number: 1 (lower is better)
Translates to: RPASEFTEFTTGACA*WEVRRLCLRPGQRS
Trigger: GCTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCGTGAATTCAGTGAATTCAGAGGCAGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CCA 90 bp CCTGCAGGATGCACTTGCACCAACCGTCCACAGCCAAGTCCGAGGTaGGTGCTGCAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCAT +
Preference number: 1 (lower is better)
Translates to: PAGCTCTNRPQPSPR*VLQASGRTRRTPGH
Trigger: ATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCTGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR GCA 90 bp AAGGTCAGCCCACAGCTGCGCACAGCCAGCCCTGCAGGATGCACTTaGACCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCC +
Preference number: 1 (lower is better)
Translates to: KVSPQLRTASPAGCT*TNRPQPSPRWVLQA
Trigger: GGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCTGCAGGGCTGGCTGTGCGCAGCTGTGGGCTGACCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR TCA 90 bp ACCTGGGGAGCCTCGCCTCCTGTGGCAGCAGCTCCCGACTCCGGATaGTCCCGTCCTGCCTCTGAATTCACTGAATTCACGACGGGCGCA +
Preference number: 1 (lower is better)
Translates to: TWGASPPVAAAPDSG*SRPASEFTEFTTGA
Trigger: TGCGCCCGTCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTGCTGCCACAGGAGGCGAGGCTCCCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR GCA 90 bp TCTGCAAAGGTCAGCCCACAGCTGCGCACAGCCAGCCCTGCAGGATaGACTTGCACCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTG +
Preference number: 1 (lower is better)
Translates to: SAKVSPQLRTASPAG*TCTNRPQPSPRWVL
Trigger: CAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCTGCAGGGCTGGCTGTGCGCAGCTGTGGGCTGACCTTTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR TCA 90 bp GCCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTaGTTGGCATCTGTGTACACGTCTCTGTTTATATACTTATTCATC +
Preference number: 1 (lower is better)
Translates to: APRTREGGPRVWFGR*LASVYTSLFIYLFI
Trigger: GATGAATAAGTATATAAACAGAGACGTGTACACAGATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR GCA 90 bp CCTTTATTGCACTTTTATGACATTGCAAACTATTCCACAAAACTCTaGAAAGGTCAGCCCACAGCTGCGCACAGCCAGCCCTGCAGGATG +
Preference number: 1 (lower is better)
Translates to: PLLHFYDIANYSTKL*KGQPTAAHSQPCRM
Trigger: CATCCTGCAGGGCTGGCTGTGCGCAGCTGTGGGCTGACCTTTGCAGAGTTTTGTGGAATAGTTTGCAATGTCATAAAAGTGCAATAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR TCA 90 bp CCCGTGAGGCCGACACACATCTGCTGTACCTTTATTGCACTTTTATaGCATTGCAAACTATTCCACAAAACTCTGCAAAGGTCAGCCCAC +
Preference number: 1 (lower is better)
Translates to: PVRPTHICCTFIALL*HCKLFHKTLQRSAH
Trigger: GTGGGCTGACCTTTGCAGAGTTTTGTGGAATAGTTTGCAATGTCATAAAAGTGCAATAAAGGTACAGCAGATGTGTGTCGGCCTCACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CCA 90 bp CCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTaGCATCTGTGTACACGTCTCTGTTTATATACTTATTCATCAAAT +
Preference number: 1 (lower is better)
Translates to: PEPGRAVLVFGLVGD*HLCTRLCLYTYSSN
Trigger: ATTTGATGAATAAGTATATAAACAGAGACGTGTACACAGATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR GCA 90 bp GGCATCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCACGGGCGCATGCGCTTaGTGGGAGGTCCGGCGCCTC +
Preference number: 2 (lower is better)
Translates to: GIRPPAHRPDVQREPPPVTGACA*WEVRRL
Trigger: GAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGT...GACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGATGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR CCA 90 bp CCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCCAGCGGGCGGACTCGGCGCATGCGCTTGCTaGGAGGTCCGGCGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: PTVHSQVRGGCCRPAGGLGACAC*EVRRLC
Trigger: ACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCC...GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR CCA 90 bp GCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGACGAGACCCTCCGAGCCTCGCCTCCTGTaGCAGCAGCTCCCGACTCCG +
Preference number: 2 (lower is better)
Translates to: AQARRPARASSRPQTRPSEPRLL*QQLPTP
Trigger: CGGAGTCGGGAGCTGCTGCCACAGGAGGCGAGGCTC...GGAGGGTCTCGTCTGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR TCA 90 bp TCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGGCTCCCGACTCCGGATaGTCCCGTCCTGCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: SRPQTRPSSPPGAEAPGRAPDSG*SRPASE
Trigger: TTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGC...CCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR TCA 90 bp AGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGGGCCGCCTCTGTCCGTaGGCACAGACAGCGCTTCCT +
Preference number: 2 (lower is better)
Translates to: RPAGGLAGRLVIGSSKTTGRLCP*AQTALP
Trigger: AGGAAGCGCTGTCTGTGCTCACGGACAGAGGCGGCC...CGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR GCA 90 bp GCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGACGAGACCCTCCTTCACGACGGGCGCATaGGCTTGCTGGGAGGTCCGG +
Preference number: 2 (lower is better)
Translates to: AQARRPARASSRPQTRPSFTTGA*ACWEVR
Trigger: CCGGACCTCCCAGCAAGCGCATGCGCCCGTCGTGAA...GGAGGGTCTCGTCTGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR GCA 90 bp GGCATCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCACAGAAAGGATGGAATaGCTCCGGCGCCGGCCGCCT +
Preference number: 2 (lower is better)
Translates to: GIRPPAHRPDVQREPPPVTERME*LRRRPP
Trigger: AGGCGGCCGGCGCCGGAGGCATTCCATCCTTTCTGT...GACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGATGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR CCA 90 bp GAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCACAGACAGCGAGCCTCGCCTCCTGTaGCAGCAGCTCCCGACTCCG +
Preference number: 2 (lower is better)
Translates to: ERMECLRRRPPLSVSTDSEPRLL*QQLPTP
Trigger: CGGAGTCGGGAGCTGCTGCCACAGGAGGCGAGGCTC...GCTGTCTGTGCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR TCA 90 bp CCTCCTCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAGTGTGAGAGCACTTaGGGGGTGAGCTTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: PPPVLRRDPPALQEPRPQECEST*GVSLAL
Trigger: CAAGGCCAAGCTCACCCCTCAAGTGCTCTCACACTC...CTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR GCA 90 bp AGGATGCACTTGCACCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCACGGGCGCATGCGCTTaGTGGGAGGTCCGGCGCCTC +
Preference number: 2 (lower is better)
Translates to: RMHLHQPSTAKSEVGAAGTGACA*WEVRRL
Trigger: GAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGT...GCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR TCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGCTCCCGACTCCGGATaGTCCCGTCCTGCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVAPDSG*SRPASE
Trigger: TTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGC...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR CCA 90 bp GAGGGGCCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATGGCGCATGCGCTTGCTaGGAGGTCCGGCGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: EGPPEPGRAVLVFGLVGDGACAC*EVRRLC
Trigger: ACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCC...ATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGGCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR TCA 90 bp CGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAGAGTGTGAGAGCACTTaGGGGGTGAGCTTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: RPQTRPSSPPGAEAPGRRECEST*GVSLAL
Trigger: CAAGGCCAAGCTCACCCCTCAAGTGCTCTCACACTC...TCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR GCA 90 bp GAGGGGCCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTTCACGACGGGCGCATaGGCTTGCTGGGAGGTCCGG +
Preference number: 2 (lower is better)
Translates to: EGPPEPGRAVLVFGLVGDFTTGA*ACWEVR
Trigger: CCGGACCTCCCAGCAAGCGCATGCGCCCGTCGTGAA...ATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGGCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR CCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTATCCCTACAGAAAGGATaGAATGCCTCCGGCGCCGGC +
Preference number: 2 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVSLQKG*NASGAG
Trigger: GCCGGCGCCGGAGGCATTCCATCCTTTCTGTAGGGA...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR TCA 90 bp GCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGACGAGACCCTCCATTAGGTCCCGAGTGTaGGAGCACTTGAGGGGTGAG +
Preference number: 2 (lower is better)
Translates to: AQARRPARASSRPQTRPSIRSRV*EHLRGE
Trigger: CTCACCCCTCAAGTGCTCTCACACTCGGGACCTAAT...GGAGGGTCTCGTCTGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR TCA 90 bp CCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAAAGATTAGGTCCCGAGTGTaGGAGCACTTGAGGGGTGAG +
Preference number: 2 (lower is better)
Translates to: PQTRPSSPPGAEAPGRRKIRSRV*EHLRGE
Trigger: CTCACCCCTCAAGTGCTCTCACACTCGGGACCTAAT...CTTTCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR CCA 90 bp GCAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCAGGTTTGGTAGGTGATTaGCATCTGTGTACACGTCTC +
Preference number: 2 (lower is better)
Translates to: AGQRADSQDAWSSGPPKPGLVGD*HLCTRL
Trigger: GAGACGTGTACACAGATGCCAATCACCTACCAAACC...TGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR TCA 90 bp TCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGTTTCTGGTCAAACACTaGCAAAATGTGTCCTATGAG +
Preference number: 2 (lower is better)
Translates to: SRPQTRPSSPPGAEAPGRFLVKH*QNVSYE
Trigger: CTCATAGGACACATTTTGTCAGTGTTTGACCAGAAA...CCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR TCA 90 bp AGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTTTCTGGTCAAACACTaGCAAAATGTGTCCTATGAG +
Preference number: 2 (lower is better)
Translates to: RPAGGLAGRLVIGSSKTTFLVKH*QNVSYE
Trigger: CTCATAGGACACATTTTGTCAGTGTTTGACCAGAAA...CGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CAA 90 bp CTTGAGGGGCCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTaGGTAGGTGATTGGCATCTGTGTACACGTCTCTGTTTATATACT +
Preference number: 2 (lower is better)
Translates to: LEGPPEPGRAVLVFG*VGDWHLCTRLCLYT
Trigger: AGTATATAAACAGAGACGTGTACACAGATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGGCCCCTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CAA 90 bp GAGGCCGACACACATCTGCTGTACCTTTATTGCACTTTTATGACATaGCAAACTATTCCACAAAACTCTGCAAAGGTCAGCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: EADTHLLYLYCTFMT*QTIPQNSAKVSPQL
Trigger: CAGCTGTGGGCTGACCTTTGCAGAGTTTTGTGGAATAGTTTGCAATGTCATAAAAGTGCAATAAAGGTACAGCAGATGTGTGTCGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR CAA 90 bp GCAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCAGACGGGCGCATGCGCTaGCTGGGAGGTCCGGCGCCT +
Preference number: 3 (lower is better)
Translates to: AGQRADSQDAWSSGPPKPDGRMR*LGGPAP
Trigger: AGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTC...TGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR GCA 72 bp GCACCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTaGAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTC +
Preference number: 3 (lower is better)
Translates to: APTVHSQVRGGC*RPAGGLAGRLV
Trigger: GACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CCA 72 bp GGTGCTGCAGGCCAGCGGGCGGACTCGCAGGACGCCTaGTCATCGGGTCCTCCAAAACCACGTAGGCATCCG +
Preference number: 3 (lower is better)
Translates to: GAAGQRADSQDA*SSGPPKPRRHP
Trigger: CGGATGCCTACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGCAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CCA 72 bp TGCACTTGCACCAACCGTCCACAGCCAAGTCCGAGGTaGGTGCTGCAGGCCAGCGGGCGGACTCGCAGGACG +
Preference number: 3 (lower is better)
Translates to: CTCTNRPQPSPR*VLQASGRTRRT
Trigger: CGTCCTGCGAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR GCA 72 bp CCACAGCTGCGCACAGCCAGCCCTGCAGGATGCACTTaGACCAACCGTCCACAGCCAAGTCCGAGGTGGGTG +
Preference number: 3 (lower is better)
Translates to: PQLRTASPAGCT*TNRPQPSPRWV
Trigger: CACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCTGCAGGGCTGGCTGTGCGCAGCTGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR GCA 72 bp GTCAGCCCACAGCTGCGCACAGCCAGCCCTGCAGGATaGACTTGCACCAACCGTCCACAGCCAAGTCCGAGG +
Preference number: 3 (lower is better)
Translates to: VSPQLRTASPAG*TCTNRPQPSPR
Trigger: CCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCTGCAGGGCTGGCTGTGCGCAGCTGTGGGCTGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CCA 72 bp GAATTCACTGAATTCACGACGGGCGCATGCGCTTGCTaGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAG +
Preference number: 3 (lower is better)
Translates to: EFTEFTTGACAC*EVRRLCLRPGQ
Trigger: CTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCGTGAATTCAGTGAATTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR GCA 72 bp TCTGAATTCACTGAATTCACGACGGGCGCATGCGCTTaGTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGG +
Preference number: 3 (lower is better)
Translates to: SEFTEFTTGACA*WEVRRLCLRPG
Trigger: CCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCGTGAATTCAGTGAATTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR-3UTR CAA 90 bp CCTCCTCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGTCCTCGTGTTTGGTTaGGTAGGTGATTGGCATCTG +
Preference number: 3 (lower is better)
Translates to: PPPVLRRDPPALQEPRPQVLVFG*VGDWHL
Trigger: CAGATGCCAATCACCTACCAAACCAAACACGAGGAC...CTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR GCA 72 bp CCTGCCTCTGAATTCACTGAATTCACGACGGGCGCATaGGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGT +
Preference number: 3 (lower is better)
Translates to: PASEFTEFTTGA*ACWEVRRLCLR
Trigger: ACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCGTGAATTCAGTGAATTCAGAGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR TCA 72 bp ACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTaGTTGGCATCTGTGTACACGTCTCTGTTTATATAC +
Preference number: 3 (lower is better)
Translates to: TREGGPRVWFGR*LASVYTSLFIY
Trigger: GTATATAAACAGAGACGTGTACACAGATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CCA 72 bp GGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTaGCATCTGTGTACACGTCTCTGTTTATATACTTAT +
Preference number: 3 (lower is better)
Translates to: GRAVLVFGLVGD*HLCTRLCLYTY
Trigger: ATAAGTATATAAACAGAGACGTGTACACAGATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGCGGCCGGCGGACTGGGAGCTGAGGTCGTaGAGCAGGGCCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: LGGPAPLSPSRAAQRPADWELRS*SRASMA
Trigger: GGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCA...GTCCGCCGGCCGCTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGCGGCCGGCGGACCCAGGATGCGGTGGCTaGTGTCGTAGGGCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LGGPAPLSPSRAAQRPADPGCGG*CRRAVS
Trigger: AGACACCGCCCTACGACAGCAGCCACCGCATCCTGG...GTCCGCCGGCCGCTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp ACGACGGGCGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGACGGGCGCATGCGCTTaGTGGGAGGTCCGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: TTGACACWEVRRLCLRPGTGACA*WEVRRL
Trigger: GAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGT...CCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGCGGCCGGCGGACACAGAAAGGATGGAATaGCTCCGGCGCCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LGGPAPLSPSRAAQRPADTERME*LRRRPP
Trigger: AGGCGGCCGGCGCCGGAGGCATTCCATCCTTTCTGT...GTCCGCCGGCCGCTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGGGAGCGTGTGCTTGTTaGGCCAGCCCGCGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: RMRLLGGPAPLSPSRAAQGACAC*ASPRRR
Trigger: CCGGCGACGCGGGCTGGCCCAACAAGCACACGCTCC...CTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGCGGCCGGCGGACGCAGCAGGGCCTCGATaGCCGGGTTGTGTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LGGPAPLSPSRAAQRPADAAGPR*PGCVWS
Trigger: ACTCCAGACACAACCCGGCCATCGAGGCCCTGCTGC...GTCCGCCGGCCGCTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CGACGGGCGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCGGCCGCCTCTGTCCGTaGGCACAGACAGCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RRAHALAGRSGASVSVPGGRLCP*AQTALP
Trigger: AGGAAGCGCTGTCTGTGCTCACGGACAGAGGCGGCC...GCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGGACGTCCTCCTCCGTaGGCGGCGGAACCGCCACCC +
Preference number: 4 (lower is better)
Translates to: QASGRTRRTPGHRVLQNHGRPPP*AAEPPP
Trigger: GGGTGGCGGTTCCGCCGCTCACGGAGGAGGACGTCC...GTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp TCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGGTCCGAGGTGGGTGCTaGAGGCCAGCGGGCGGACTC +
Preference number: 4 (lower is better)
Translates to: SRPQTRPSSPPGAEAPGRVRGGC*RPAGGL
Trigger: GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGAC...CCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGAGGTCAGCCCACAGCTaGGCACAGCCAGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RMRLLGGPAPLSPSRAAQRSAHS*AQPALQ
Trigger: CTGCAGGGCTGGCTGTGCGCAGCTGTGGGCTGACCT...CTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GCAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACCCTCTAGCTGCAGCTaGGCACGAGCGCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: AGQRADSQDAWSSGPPKPPSSCS*ARARRR
Trigger: GCGGCGCCGCGCTCGTGCCCAGCTGCAGCTAGAGGG...TGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CGACGGGCGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGAGCCCTCGATCTaGTCTGGCTTCCCGCACAGG +
Preference number: 4 (lower is better)
Translates to: RRAHALAGRSGASVSVPGSEPSI*SGFPHR
Trigger: CCTGTGCGGGAAGCCAGACCAGATCGAGGGCTCGCT...GCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCTCCTCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGGCGCATGCGCTTGCTaGGAGGTCCGGCGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PPPVLRRDPPALQEPRPQGACAC*EVRRLC
Trigger: ACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCC...CTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCTCCTCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAGCCTCGCCTCCTGTaGCAGCAGCTCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: PPPVLRRDPPALQEPRPQEPRLL*QQLPTP
Trigger: CGGAGTCGGGAGCTGCTGCCACAGGAGGCGAGGCTC...CTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCTCCTCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGCAGCCAAGTCCGAGGTaGGTGCTGCAGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PPPVLRRDPPALQEPRPQQPSPR*VLQASG
Trigger: CCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTG...CTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAAAGGGACGTCCTCCTCCGTaGGCGGCGGAACCGCCACCC +
Preference number: 4 (lower is better)
Translates to: PQTRPSSPPGAEAPGRRKGRPPP*AAEPPP
Trigger: GGGTGGCGGTTCCGCCGCTCACGGAGGAGGACGTCC...CTTTCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGCCTGGAGCGCGTTCTaGCCGCGCGCCCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: QASGRTRRTPGHRVLQNHAWSAF*PRAPLA
Trigger: AGCTAGAGGGGCGCGCGGGCAGAACGCGCTCCAGGC...GTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CGACGGGCGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCCCCACTCGGCCTTCTTaGGCTTGTGGTAGGAACGCC +
Preference number: 4 (lower is better)
Translates to: RRAHALAGRSGASVSVPGPTRPS*ACGRNA
Trigger: GGCGTTCCTACCACAAGCGCAAGAAGGCCGAGTGGG...GCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp ACGACGGGCGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGGCCGAGGCGGCTCTGTaGTCAGTGTCCAGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: TTGACACWEVRRLCLRPGAEAAL*SVSRSS
Trigger: TGACGACCTGGACACTGAGCACAGAGCCGCCTCGGC...CCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp TCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGGAGCGTGTGCTTGTTaGGCCAGCCCGCGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: SVHQRTGQTSSESLLPSSGACAC*ASPRRR
Trigger: CCGGCGACGCGGGCTGGCCCAACAAGCACACGCTCC...TGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCTCCTCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGCCCTCGATCTGGTCTaGCTTCCCGCACAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PPPVLRRDPPALQEPRPQALDLV*LPAQGV
Trigger: CACGCCCTGTGCGGGAAGCCAGACCAGATCGAGGGC...CTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGCCGCCGCTTTGGGGCTaGGCCTGGTGTCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PSSDETLQPSRSRGPRKEPPLWG*AWCRCS
Trigger: TGAACAGCGACACCAGGCTCAGCCCCAAAGCGGCGG...CTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGACGAGACCCTCCGAGGGACCCGCCCCGTaGGGCCGACACACATCTGCT +
Preference number: 4 (lower is better)
Translates to: AQARRPARASSRPQTRPSEGPAP*GRHTSA
Trigger: AGCAGATGTGTGTCGGCCTCACGGGGCGGGTCCCTC...GGAGGGTCTCGTCTGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp TCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGGTCAAGGTCCATCGGTaGCGGGCGGCTACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRPQTRPSSPPGAEAPGRVKVHR*RAATSS
Trigger: GGAGCTGGTAGCCGCCCGGCACCGATGGACCTTGAC...CCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGTCGGAGCTGAAGTCCTaGAGGATGCGGAGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: RMRLLGGPAPLSPSRAAQSELKS*RMRSVC
Trigger: GCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGA...CTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp GGCATCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCTGGGAGCTGAGGTCGTaGAGCAGGGCCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: GIRPPAHRPDVQREPPPVWELRS*SRASMA
Trigger: GGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCA...GACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGATGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp TTCCCTACAGAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCGGCTCATCGGGCGTGTaGGTCCATCCCGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: FPTERMECLRRRPPLSVSGSSGV*VHPGRG
Trigger: GCCCCGGCCGGGATGGACCCACACGCCCGATGAGCC...GCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTCTGTAGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAAAGCGCGTCGCTCCAGCCTaGGCAGCAGGTCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: PQTRPSSPPGAEAPGRRKRVAPA*AAGPGR
Trigger: TCGCCCTGGACCTGCTGCCCAGGCTGGAGCGACGCG...CTTTCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGGCCCTCGATCTGGTCTaGCTTCCCGCACAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PSSDETLQPSRSRGPRKEALDLV*LPAQGV
Trigger: CACGCCCTGTGCGGGAAGCCAGACCAGATCGAGGGC...CTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp TCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGCCTCCAGGTGCGGCTaGTACAGCACGGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: SVHQRTGQTSSESLLPSSASRCG*YSTGAT
Trigger: GGTGGCACCCGTGCTGTACCAGCCGCACCTGGAGGC...TGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp GAGGGGCCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATGCGCGCCCCTCTAGCTaGAGCTGGGCACGAGCGCGG +
Preference number: 4 (lower is better)
Translates to: EGPPEPGRAVLVFGLVGDARPSS*SWARAR
Trigger: CCGCGCTCGTGCCCAGCTGCAGCTAGAGGGGCGCGC...ATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGGCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAAGGATGCGGAGCGTGTaGTTGTTGGGCCAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RPQTRPSSPPGAEAPGRRRMRSV*LLGQPA
Trigger: CGCGGGCTGGCCCAACAAGCACACGCTCCGCATCCT...TCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGATTCACGACGGGCGCATaGGCTTGCTGGGAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: RPQTRPSSPPGAEAPGRRFTTGA*ACWEVR
Trigger: CCGGACCTCCCAGCAAGCGCATGCGCCCGTCGTGAA...TCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp TCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCATTCACGACGGGCGCATaGGCTTGCTGGGAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SVHQRTGQTSSESLLPSSFTTGA*ACWEVR
Trigger: CCGGACCTCCCAGCAAGCGCATGCGCCCGTCGTGAA...TGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp ACGACGGGCGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGTGGCCGGGTTGTGTCTaGAGTACAGCTCGTACCGGT +
Preference number: 4 (lower is better)
Translates to: TTGACACWEVRRLCLRPGWPGCV*STARTG
Trigger: ACCGGTACGAGCTGTACTCCAGACACAACCCGGCCA...CCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGGCCAGGTCTTCCTCTTaGCCAGGGACAGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PSSDETLQPSRSRGPRKEARSSS*PGTGRA
Trigger: TGCCCGACCTGTCCCTGGCCAAGAGGAAGACCTGGC...CTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGGACTCGCAGGACGCCTaGTCATCGGGTCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: RMRLLGGPAPLSPSRAAQDSQDA*SSGPPK
Trigger: TTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTC...CTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTACAGCCAAGTCCGAGGTaGGTGCTGCAGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVQPSPR*VLQASG
Trigger: CCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTG...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACAGGAGGGGTCGGAGCTaGAGTCCTGCAGGATGCGGA +
Preference number: 4 (lower is better)
Translates to: QASGRTRRTPGHRVLQNHRRGRS*SPAGCG
Trigger: TCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCT...GTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTACCGCCGCTTTGGGGCTaGGCCTGGTGTCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVPPLWG*AWCRCS
Trigger: TGAACAGCGACACCAGGCTCAGCCCCAAAGCGGCGG...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCCAGCGGGCGGACTCTCTCCTTGGTCATGTTaGCCATCCTGCCGGCCACGG +
Preference number: 4 (lower is better)
Translates to: PTVHSQVRGGCCRPAGGLSPWSC*PSCRPR
Trigger: CCGTGGCCGGCAGGATGGTCAACATGACCAAGGAGA...GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGGCTTCTTGTCCCGTGTaGCGTCCCGGATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PSSDETLQPSRSRGPRKEASCPV*RPGSPW
Trigger: CCAAGGAGATCCGGGACGTCACACGGGACAAGAAGC...CTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCCAGCGGGCGGACTCGCTTCTTGTCCCGTGTaGCGTCCCGGATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PTVHSQVRGGCCRPAGGLASCPV*RPGSPW
Trigger: CCAAGGAGATCCGGGACGTCACACGGGACAAGAAGC...GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAGCTCCCGACTCCGGATaGTCCCGTCCTGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RPQTRPSSPPGAEAPGRRAPDSG*SRPASE
Trigger: TTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGC...TCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGGCCGCCTCTGTCCGTaGGCACAGACAGCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVGRLCP*AQTALP
Trigger: AGGAAGCGCTGTCTGTGCTCACGGACAGAGGCGGCC...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp GCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGACGAGACCCTCCCCAGGATGCGGTGGCTaGTGTCGTAGGGCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: AQARRPARASSRPQTRPSPGCGG*CRRAVS
Trigger: AGACACCGCCCTACGACAGCAGCCACCGCATCCTGG...GGAGGGTCTCGTCTGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp TCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAACAGAAAGGATGGAATaGCTCCGGCGCCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SVHQRTGQTSSESLLPSSTERME*LRRRPP
Trigger: AGGCGGCCGGCGCCGGAGGCATTCCATCCTTTCTGT...TGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp AGGATGCACTTGCACCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCGTCCGAGGTGGGTGCTaGAGGCCAGCGGGCGGACTC +
Preference number: 4 (lower is better)
Translates to: RMHLHQPSTAKSEVGAAGVRGGC*RPAGGL
Trigger: GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGAC...GCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp TCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGGCGCACAGCCAGCCCTaGAGGATGCACTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: SRPQTRPSSPPGAEAPGRAHSQP*RMHLHQ
Trigger: TTGGTGCAAGTGCATCCTGCAGGGCTGGCTGTGCGC...CCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GAGGGGCCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATCGCGTCGCTCCAGCCTaGGCAGCAGGTCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: EGPPEPGRAVLVFGLVGDRVAPA*AAGPGR
Trigger: TCGCCCTGGACCTGCTGCCCAGGCTGGAGCGACGCG...ATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGGCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGGGGTGCTCGAACAGCCTaGCCAGGAGGGAGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: QRADSQDAWSSGPPKPRRGARTA*PGGRRL
Trigger: GAGACGCCTCCCTCCTGGCCAGGCTGTTCGAGCACC...CCTACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp TTCCCTACAGAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCGCCTCCAGGTGCGGCTaGTACAGCACGGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: FPTERMECLRRRPPLSVSASRCG*YSTGAT
Trigger: GGTGGCACCCGTGCTGTACCAGCCGCACCTGGAGGC...GCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTCTGTAGGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGTCATCCACCACGCTGTaGAGCCCGTTCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: PSSDETLQPSRSRGPRKESSTTL*SPFLST
Trigger: CGTGGAGAGGAACGGGCTCCACAGCGTGGTGGATGA...CTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GGCATCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCTCATCCACCACGCTGTaGAGCCCGTTCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: GIRPPAHRPDVQREPPPVSSTTL*SPFLST
Trigger: CGTGGAGAGGAACGGGCTCCACAGCGTGGTGGATGA...GACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGGGGAACACCATCAGGATaGGCACGCGGAACCGGCGCA +
Preference number: 4 (lower is better)
Translates to: QRADSQDAWSSGPPKPRRGTPSG*ARGTGA
Trigger: TGCGCCGGTTCCGCGTGCTCATCCTGATGGTGTTCC...CCTACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGGAACACCATCAGGATaGGCACGCGGAACCGGCGCA +
Preference number: 4 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVGTPSG*ARGTGA
Trigger: TGCGCCGGTTCCGCGTGCTCATCCTGATGGTGTTCC...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp TCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGATCGTCATGTCCATaGCGTCCAGGATGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: SRPQTRPSSPPGAEAPGRRSSCP*RPGCGG
Trigger: GCCACCGCATCCTGGACGTCATGGACATGACGATCT...CCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GGCATCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCGAGTGTGAGAGCACTTaGGGGGTGAGCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GIRPPAHRPDVQREPPPVECEST*GVSLAL
Trigger: CAAGGCCAAGCTCACCCCTCAAGTGCTCTCACACTC...GACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTGGCATGCGCGCCCCTCTAGCTaGAGCTGGGCACGAGCGCGG +
Preference number: 4 (lower is better)
Translates to: PPEPGRAVLVFGLVGDWHARPSS*SWARAR
Trigger: CCGCGCTCGTGCCCAGCTGCAGCTAGAGGGGCGCGC...ATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGGGCCGAGGCGGCTCTGTaGTCAGTGTCCAGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: QRADSQDAWSSGPPKPRRAEAAL*SVSRSS
Trigger: TGACGACCTGGACACTGAGCACAGAGCCGCCTCGGC...CCTACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCCAGCGGGCGGACTCCCTGCAGGATGCACTTaGACCAACCGTCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PTVHSQVRGGCCRPAGGLPAGCT*TNRPQP
Trigger: TGGCTGTGGACGGTTGGTGCAAGTGCATCCTGCAGG...GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp GCAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCAGCCAGCCCTGCAGGATaGACTTGCACCAACCGTCCA +
Preference number: 4 (lower is better)
Translates to: AGQRADSQDAWSSGPPKPASPAG*TCTNRP
Trigger: TGGACGGTTGGTGCAAGTGCATCCTGCAGGGCTGGC...TGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGCGGCCGGCGGACAGGCCGACACACATCTaGTGTACCTTTATTGCACTT +
Preference number: 4 (lower is better)
Translates to: LGGPAPLSPSRAAQRPADRPTHI*CTFIAL
Trigger: AAGTGCAATAAAGGTACAGCAGATGTGTGTCGGCCT...GTCCGCCGGCCGCTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTGGCATGGCTCATCGGGCGTGTaGGTCCATCCCGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PPEPGRAVLVFGLVGDWHGSSGV*VHPGRG
Trigger: GCCCCGGCCGGGATGGACCCACACGCCCGATGAGCC...ATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CTGTGGCAGCAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGCCAGCATCATCTTCATaGCCGCGCGGGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LWQQLPTPDDPVLPLNSLPASSS*PRGPAR
Trigger: CCGGGCCGGCCCGCGCGGCCATGAAGATGATGCTGG...CAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTGCTGCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCACAGACAGCGCAGCAGGGCCTCGATaGCCGGGTTGTGTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ERMECLRRRPPLSVSTDSAAGPR*PGCVWS
Trigger: ACTCCAGACACAACCCGGCCATCGAGGCCCTGCTGC...GCTGTCTGTGCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAACGCTGGTGATCCTCTaGGAGCTGAGGTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RPQTRPSSPPGAEAPGRRTLVIL*ELRSCS
Trigger: GCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGT...TCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp TCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGCAGACGCAGGTAGGTaGACTTCCGGATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SVHQRTGQTSSESLLPSSADAGR*TSGSCS
Trigger: GCTGCAGGATCCGGAAGTCCACCTACCTGCGTCTGC...TGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp AGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGGTGTCCTATGAGACCTaGGGAGCCTCGCCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RPAGGLAGRLVIGSSKTTVSYET*GASPPV
Trigger: CACAGGAGGCGAGGCTCCCCAGGTCTCATAGGACAC...CGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCCAGCGGGCGGACTCGACTCGCAGGACGCCTaGTCATCGGGTCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PTVHSQVRGGCCRPAGGLDSQDA*SSGPPK
Trigger: TTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTC...GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCTCCTCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGTGTTGGCTGGAGAGATaGAGAAGGTCCTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PPPVLRRDPPALQEPRPQCWLER*RRSSRA
Trigger: AGCTCTGGAGGACCTTCTTCATCTCTCCAGCCAACA...CTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp AGGATGCACTTGCACCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCAGGATGCGGAGCGTGTaGTTGTTGGGCCAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RMHLHQPSTAKSEVGAAGRMRSV*LLGQPA
Trigger: CGCGGGCTGGCCCAACAAGCACACGCTCCGCATCCT...GCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp GAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCACAGACAGCCGGATCCTGCAGCACTaGTGTAGCGGCACCAGGATG +
Preference number: 4 (lower is better)
Translates to: ERMECLRRRPPLSVSTDSRILQH*CSGTRM
Trigger: CATCCTGGTGCCGCTACAGCAGTGCTGCAGGATCCG...GCTGTCTGTGCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTGGCATACGGGCGCATGCGCTTaGTGGGAGGTCCGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: PPEPGRAVLVFGLVGDWHTGACA*WEVRRL
Trigger: GAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGT...ATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp GCAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACCTGCAGGATGCACTTaGACCAACCGTCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: AGQRADSQDAWSSGPPKPPAGCT*TNRPQP
Trigger: TGGCTGTGGACGGTTGGTGCAAGTGCATCCTGCAGG...TGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAACGCTGGTGATCCTCTaGGAGCTGAGGTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVTLVIL*ELRSCS
Trigger: GCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGT...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CGACGGGCGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCGCAGATGTTGTTGGCTaGAGAGATGAAGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RRAHALAGRSGASVSVPGADVVG*RDEEGP
Trigger: AGGACCTTCTTCATCTCTCCAGCCAACAACATCTGC...GCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAGTAGCGGCACCAGGATaGAGAGCTCGTCGTGCGAAT +
Preference number: 4 (lower is better)
Translates to: RPQTRPSSPPGAEAPGRRVAAPG*RARRAN
Trigger: ATTCGCACGACGAGCTCTCCATCCTGGTGCCGCTAC...TCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGCAGACGCAGGTAGGTaGACTTCCGGATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVADAGR*TSGSCS
Trigger: GCTGCAGGATCCGGAAGTCCACCTACCTGCGTCTGC...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAGCTTGTACTCCTCCTTaGCCAGGAGCTGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: RPQTRPSSPPGAEAPGRRACTPP*PGAADA
Trigger: TGCGTCTGCAGCTCCTGGCCAAGGAGGAGTACAAGC...TCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGATGTCGCTGTTCACATTaGACAGGACGTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RPQTRPSSPPGAEAPGRRCRCSH*TGRPPP
Trigger: CGGAGGAGGACGTCCTGTTCAATGTGAACAGCGACA...TCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCCAGCGGGCGGACTCTGTTGGCTGGAGAGATaGAGAAGGTCCTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PTVHSQVRGGCCRPAGGLCWLER*RRSSRA
Trigger: AGCTCTGGAGGACCTTCTTCATCTCTCCAGCCAACA...GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCACAGACAGCAGATCGTCATGTCCATaGCGTCCAGGATGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: ERMECLRRRPPLSVSTDSRSSCP*RPGCGG
Trigger: GCCACCGCATCCTGGACGTCATGGACATGACGATCT...GCTGTCTGTGCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp TTCCCTACAGAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCTCGGAGCTGAAGTCCTaGAGGATGCGGAGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: FPTERMECLRRRPPLSVSSELKS*RMRSVC
Trigger: GCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGA...GCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTCTGTAGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GCAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCAAGTTTCTCCAGCGAGTaGGACGAGAGGTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AGQRADSQDAWSSGPPKPSFSSE*DERLEE
Trigger: CTCCTCCAACCTCTCGTCCCACTCGCTGGAGAAACT...TGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACAGTTTCTCCAGCGAGTaGGACGAGAGGTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QASGRTRRTPGHRVLQNHSFSSE*DERLEE
Trigger: CTCCTCCAACCTCTCGTCCCACTCGCTGGAGAAACT...GTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp TTCCCTACAGAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCGTGTCCTATGAGACCTaGGGAGCCTCGCCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: FPTERMECLRRRPPLSVSVSYET*GASPPV
Trigger: CACAGGAGGCGAGGCTCCCCAGGTCTCATAGGACAC...GCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTCTGTAGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAAAGTGTCGCTGTTCACATTaGACAGGACGTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PQTRPSSPPGAEAPGRRKCRCSH*TGRPPP
Trigger: CGGAGGAGGACGTCCTGTTCAATGTGAACAGCGACA...CTTTCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCTCCTCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGTACCAATGTGGAACTTaGGCCAGTTGGGATAGGAGT +
Preference number: 4 (lower is better)
Translates to: PPPVLRRDPPALQEPRPQYQCGT*ASWDRS
Trigger: ACTCCTATCCCAACTGGCTCAAGTTCCACATTGGTA...CTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAATTAGGTCCCGAGTGTaGGAGCACTTGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVIRSRV*EHLRGE
Trigger: CTCACCCCTCAAGTGCTCTCACACTCGGGACCTAAT...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTGGCATGTCAAGGTCCATCGGTaGCGGGCGGCTACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPEPGRAVLVFGLVGDWHVKVHR*RAATSS
Trigger: GGAGCTGGTAGCCGCCCGGCACCGATGGACCTTGAC...ATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp TCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGATGGAGAGCTCGTCGTaGGAATACTTCCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: SRPQTRPSSPPGAEAPGRMESSS*EYFPNP
Trigger: AGGGTTTGGGAAGTATTCGCACGACGAGCTCTCCAT...CCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp GAGGGGCCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATCGGATCCTGCAGCACTaGTGTAGCGGCACCAGGATG +
Preference number: 4 (lower is better)
Translates to: EGPPEPGRAVLVFGLVGDRILQH*CSGTRM
Trigger: CATCCTGGTGCCGCTACAGCAGTGCTGCAGGATCCG...ATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGGCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp AGGATGCACTTGCACCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCGCGCACAGCCAGCCCTaGAGGATGCACTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: RMHLHQPSTAKSEVGAAGAHSQP*RMHLHQ
Trigger: TTGGTGCAAGTGCATCCTGCAGGGCTGGCTGTGCGC...GCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGTATTCCACAAAACTCTaGAAAGGTCAGCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: RMRLLGGPAPLSPSRAAQYSTKL*KGQPTA
Trigger: AGCTGTGGGCTGACCTTTGCAGAGTTTTGTGGAATA...CTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAAAGAGGATCCTGTCCAGGTaGAAGGCAGCAATCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PQTRPSSPPGAEAPGRRKRILSR*KAAISA
Trigger: TGCGGAGATTGCTGCCTTCCACCTGGACAGGATCCT...CTTTCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAAGGATCCTGTCCAGGTaGAAGGCAGCAATCTCCGCA +
Preference number: 4 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVRILSR*KAAISA
Trigger: TGCGGAGATTGCTGCCTTCCACCTGGACAGGATCCT...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGCGGCCGGCGGACCTTCCATTGTCTAAGTaGATGATGAACGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: LGGPAPLSPSRAAQRPADLPLSK*MMNVSF
Trigger: GAATGAAACGTTCATCATCCACTTAGACAATGGAAG...GTCCGCCGGCCGCTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp TTCCCTACAGAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCGTAGCGGCACCAGGATaGAGAGCTCGTCGTGCGAAT +
Preference number: 4 (lower is better)
Translates to: FPTERMECLRRRPPLSVSVAAPG*RARRAN
Trigger: ATTCGCACGACGAGCTCTCCATCCTGGTGCCGCTAC...GCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTCTGTAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GAGGGGCCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTCCCTACAGAAAGGATaGAATGCCTCCGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: EGPPEPGRAVLVFGLVGDSLQKG*NASGAG
Trigger: GCCGGCGCCGGAGGCATTCCATCCTTTCTGTAGGGA...ATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGGCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GCAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCAGGTCCATGTTTCCCATaGGGAAGTCGAAGATCGTCA +
Preference number: 4 (lower is better)
Translates to: AGQRADSQDAWSSGPPKPGPCFP*GSRRSS
Trigger: TGACGATCTTCGACTTCCTCATGGGAAACATGGACC...TGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp AGGATGCACTTGCACCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCGAGTGTGAGAGCACTTaGGGGGTGAGCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RMHLHQPSTAKSEVGAAGECEST*GVSLAL
Trigger: CAAGGCCAAGCTCACCCCTCAAGTGCTCTCACACTC...GCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGGTGCAAGTGCATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGAATTCACGAGAGGGACCCGCCCCGTaGGGCCGACACACATCTGCT +
Preference number: 4 (lower is better)
Translates to: QLPTPDDPVLPLNSLNSREGPAP*GRHTSA
Trigger: AGCAGATGTGTGTCGGCCTCACGGGGCGGGTCCCTC...TCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTATCAGGGGGTGTCTCCTaGTCCCTCGTTTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVSGGVS*SLVCFM
Trigger: CATGAAACAAACGAGGGAGCAGGAGACACCCCCTGA...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACATGGAGAGCTCGTCGTaGGAATACTTCCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: QASGRTRRTPGHRVLQNHMESSS*EYFPNP
Trigger: AGGGTTTGGGAAGTATTCGCACGACGAGCTCTCCAT...GTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTGGCATAGCGAGCCCTCGATCTaGTCTGGCTTCCCGCACAGG +
Preference number: 4 (lower is better)
Translates to: PPEPGRAVLVFGLVGDWHSEPSI*SGFPHR
Trigger: CCTGTGCGGGAAGCCAGACCAGATCGAGGGCTCGCT...ATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGAATTCACGAGAGCCTCGCCTCCTGTaGCAGCAGCTCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: QLPTPDDPVLPLNSLNSREPRLL*QQLPTP
Trigger: CGGAGTCGGGAGCTGCTGCCACAGGAGGCGAGGCTC...TCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CTGTGGCAGCAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGTCCCTACAGAAAGGATaGAATGCCTCCGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LWQQLPTPDDPVLPLNSLSLQKG*NASGAG
Trigger: GCCGGCGCCGGAGGCATTCCATCCTTTCTGTAGGGA...CAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTGCTGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGATACCAATGTGGAACTTaGGCCAGTTGGGATAGGAGT +
Preference number: 4 (lower is better)
Translates to: RPQTRPSSPPGAEAPGRRYQCGT*ASWDRS
Trigger: ACTCCTATCCCAACTGGCTCAAGTTCCACATTGGTA...TCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp AGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGGTTTGGTTTGGTAGGTaGTTGGCATCTGTGTACACG +
Preference number: 4 (lower is better)
Translates to: RPAGGLAGRLVIGSSKTTVWFGR*LASVYT
Trigger: CGTGTACACAGATGCCAATCACCTACCAAACCAAAC...CGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGACGAGACCCTCCGTTTGGTTTGGTAGGTaGTTGGCATCTGTGTACACG +
Preference number: 4 (lower is better)
Translates to: AQARRPARASSRPQTRPSVWFGR*LASVYT
Trigger: CGTGTACACAGATGCCAATCACCTACCAAACCAAAC...GGAGGGTCTCGTCTGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTGGCATCCCACTCGGCCTTCTTaGGCTTGTGGTAGGAACGCC +
Preference number: 4 (lower is better)
Translates to: PPEPGRAVLVFGLVGDWHPTRPS*ACGRNA
Trigger: GGCGTTCCTACCACAAGCGCAAGAAGGCCGAGTGGG...ATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTGGCATGCCAGCCCTGCAGGATaGACTTGCACCAACCGTCCA +
Preference number: 4 (lower is better)
Translates to: PPEPGRAVLVFGLVGDWHASPAG*TCTNRP
Trigger: TGGACGGTTGGTGCAAGTGCATCCTGCAGGGCTGGC...ATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGAATTCACGAAGGTCAGCCCACAGCTaGGCACAGCCAGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLPTPDDPVLPLNSLNSRRSAHS*AQPALQ
Trigger: CTGCAGGGCTGGCTGTGCGCAGCTGTGGGCTGACCT...TCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGAATTCACGAGGTGCTCGAACAGCCTaGCCAGGAGGGAGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: QLPTPDDPVLPLNSLNSRGARTA*PGGRRL
Trigger: GAGACGCCTCCCTCCTGGCCAGGCTGTTCGAGCACC...TCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGACGAGACCCTCCCGGTTGATACCAATGTaGAACTTGAGCCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: AQARRPARASSRPQTRPSRLIPM*NLSQLG
Trigger: TCCCAACTGGCTCAAGTTCCACATTGGTATCAACCG...GGAGGGTCTCGTCTGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GCAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCAGCAGATGTTGTTGGCTaGAGAGATGAAGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AGQRADSQDAWSSGPPKPADVVG*RDEEGP
Trigger: AGGACCTTCTTCATCTCTCCAGCCAACAACATCTGC...TGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GAGGGGCCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATACAGGGCGTGCTCCGTaGAGCAGTAGTAGGAACACT +
Preference number: 4 (lower is better)
Translates to: EGPPEPGRAVLVFGLVGDTGRAP*SSSRNT
Trigger: AGTGTTCCTACTACTGCTCCACGGAGCACGCCCTGT...ATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGACGAGACCCTCCGGTTTGGTAGGTGATTaGCATCTGTGTACACGTCTC +
Preference number: 4 (lower is better)
Translates to: AQARRPARASSRPQTRPSGLVGD*HLCTRL
Trigger: GAGACGTGTACACAGATGCCAATCACCTACCAAACC...GGAGGGTCTCGTCTGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGGTTTGGTAGGTGATTaGCATCTGTGTACACGTCTC +
Preference number: 4 (lower is better)
Translates to: QASGRTRRTPGHRVLQNHGLVGD*HLCTRL
Trigger: GAGACGTGTACACAGATGCCAATCACCTACCAAACC...GTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGAATTCACGAGCTCCCGACTCCGGATaGTCCCGTCCTGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QLPTPDDPVLPLNSLNSRAPDSG*SRPASE
Trigger: TTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGC...TCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp TCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCATATTCCACAAAACTCTaGAAAGGTCAGCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: SVHQRTGQTSSESLLPSSYSTKL*KGQPTA
Trigger: AGCTGTGGGCTGACCTTTGCAGAGTTTTGTGGAATA...TGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTGGCATTGGCCGGGTTGTGTCTaGAGTACAGCTCGTACCGGT +
Preference number: 4 (lower is better)
Translates to: PPEPGRAVLVFGLVGDWHWPGCV*STARTG
Trigger: ACCGGTACGAGCTGTACTCCAGACACAACCCGGCCA...ATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGAATTCACGAGCCAGGTCTTCCTCTTaGCCAGGGACAGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: QLPTPDDPVLPLNSLNSRARSSS*PGTGRA
Trigger: TGCCCGACCTGTCCCTGGCCAAGAGGAAGACCTGGC...TCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAAAGTTTGTTTCATGGGTTTaGACAGCGCTTGCCCGTAAT +
Preference number: 4 (lower is better)
Translates to: PQTRPSSPPGAEAPGRRKFVSWV*TALARN
Trigger: ATTACGGGCAAGCGCTGTTCAAACCCATGAAACAAA...CTTTCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTATTTGTTTCATGGGTTTaGACAGCGCTTGCCCGTAAT +
Preference number: 4 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVFVSWV*TALARN
Trigger: ATTACGGGCAAGCGCTGTTCAAACCCATGAAACAAA...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGAATTCACGATCTCCTTGGTCATGTTaGCCATCCTGCCGGCCACGG +
Preference number: 4 (lower is better)
Translates to: QLPTPDDPVLPLNSLNSRSPWSC*PSCRPR
Trigger: CCGTGGCCGGCAGGATGGTCAACATGACCAAGGAGA...TCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp GGCATCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCTTTCTGGTCAAACACTaGCAAAATGTGTCCTATGAG +
Preference number: 4 (lower is better)
Translates to: GIRPPAHRPDVQREPPPVFLVKH*QNVSYE
Trigger: CTCATAGGACACATTTTGTCAGTGTTTGACCAGAAA...GACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTGGCATATTAGGTCCCGAGTGTaGGAGCACTTGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PPEPGRAVLVFGLVGDWHIRSRV*EHLRGE
Trigger: CTCACCCCTCAAGTGCTCTCACACTCGGGACCTAAT...ATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGAATTCACGAGGGGGAGAGGAATTCTaGACCTTCAGCACCCGCATG +
Preference number: 4 (lower is better)
Translates to: QLPTPDDPVLPLNSLNSRGGEEF*TFSTRM
Trigger: CATGCGGGTGCTGAAGGTGCAGAATTCCTCTCCCCC...TCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp TTCCCTACAGAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCAGGCCGACACACATCTaGTGTACCTTTATTGCACTT +
Preference number: 4 (lower is better)
Translates to: FPTERMECLRRRPPLSVSRPTHI*CTFIAL
Trigger: AAGTGCAATAAAGGTACAGCAGATGTGTGTCGGCCT...GCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTCTGTAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
3UTR CAA 72 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTaGGTAGGTGATTGGCATCTGTGTACACGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PPEPGRAVLVFG*VGDWHLCTRLC
Trigger: ACAGAGACGTGTACACAGATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CTCGTGTTTGGTTTGGTAGGTGATTGGCATCTGTGTACACGTCTCTGTTTATATCCCTCTAGCTGCAGCTaGGCACGAGCGCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LVFGLVGDWHLCTRLCLYPSSCS*ARARRR
Trigger: GCGGCGCCGCGCTCGTGCCCAGCTGCAGCTAGAGGG...ATATAAACAGAGACGTGTACACAGATGCCAATCACCTACCAAACCAAACACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGAATTCACGAACAGGGCGTGCTCCGTaGAGCAGTAGTAGGAACACT +
Preference number: 4 (lower is better)
Translates to: QLPTPDDPVLPLNSLNSRTGRAP*SSSRNT
Trigger: AGTGTTCCTACTACTGCTCCACGGAGCACGCCCTGT...TCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp GAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCACAGACAGCCTTCCATTGTCTAAGTaGATGATGAACGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: ERMECLRRRPPLSVSTDSLPLSK*MMNVSF
Trigger: GAATGAAACGTTCATCATCCACTTAGACAATGGAAG...GCTGTCTGTGCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CAGCTCCCGACTCCGGATGATCCCGTCCTGCCTCTGAATTCACTGAATTCACGACGGTTGATACCAATGTaGAACTTGAGCCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: QLPTPDDPVLPLNSLNSRRLIPM*NLSQLG
Trigger: TCCCAACTGGCTCAAGTTCCACATTGGTATCAACCG...TCGTGAATTCAGTGAATTCAGAGGCAGGACGGGATCATCCGGAGTCGGGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CCA 90 bp CTCGTGTTTGGTTTGGTAGGTGATTGGCATCTGTGTACACGTCTCTGTTTATATGCTTGTACTCCTCCTTaGCCAGGAGCTGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: LVFGLVGDWHLCTRLCLYACTPP*PGAADA
Trigger: TGCGTCTGCAGCTCCTGGCCAAGGAGGAGTACAAGC...ATATAAACAGAGACGTGTACACAGATGCCAATCACCTACCAAACCAAACACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR GCA 90 bp CTCGTGTTTGGTTTGGTAGGTGATTGGCATCTGTGTACACGTCTCTGTTTATATTCAGGGGGTGTCTCCTaGTCCCTCGTTTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: LVFGLVGDWHLCTRLCLYSGGVS*SLVCFM
Trigger: CATGAAACAAACGAGGGAGCAGGAGACACCCCCTGA...ATATAAACAGAGACGTGTACACAGATGCCAATCACCTACCAAACCAAACACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR TCA 90 bp TTTTATGACATTGCAAACTATTCCACAAAACTCTGCAAAGGTCAGCCCACAGCTGGTCCATGTTTCCCATaGGGAAGTCGAAGATCGTCA +
Preference number: 4 (lower is better)
Translates to: FYDIANYSTKLCKGQPTAGPCFP*GSRRSS
Trigger: TGACGATCTTCGACTTCCTCATGGGAAACATGGACC...AGCTGTGGGCTGACCTTTGCAGAGTTTTGTGGAATAGTTTGCAATGTCATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS GCA 90 bp GCCGGCCCGGGCCTGGAGCGCGTTCTGCCCGCGCGCCCCTCTAGCTaGAGCTGGGCACGAGCGCGGCGCCGCCTCGCGGGTCAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: AGPGLERVLPARPSS*SWARARRRLAGQGP
Trigger: TGGACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCTGCAGCTAGAGGGGCGCGCGGGCAGAACGCGCTCCAGGCCCGGGCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS GCA 90 bp TCATCTTCATGGCCGCGCGGGCCGGCCCGGGCCTGGAGCGCGTTCTaGCCGCGCGCCCCTCTAGCTGCAGCTGGGCACGAGCGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: SSSWPRGPARAWSAF*PRAPLAAAGHERGA
Trigger: GGCGCCGCGCTCGTGCCCAGCTGCAGCTAGAGGGGCGCGCGGGCAGAACGCGCTCCAGGCCCGGGCCGGCCCGCGCGGCCATGAAGATGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CCA 90 bp CCGGGCCTGGAGCGCGTTCTGCCCGCGCGCCCCTCTAGCTGCAGCTaGGCACGAGCGCGGCGCCGCCTCGCGGGTCAAGGTCCATCGGTG +
Preference number: 5 (lower is better)
Translates to: PGLERVLPARPSSCS*ARARRRLAGQGPSV
Trigger: CACCGATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCTGCAGCTAGAGGGGCGCGCGGGCAGAACGCGCTCCAGGCCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CCA 90 bp GGCGCACCAGCATCATCTTCATGGCCGCGCGGGCCGGCCCGGGCCTaGAGCGCGTTCTGCCCGCGCGCCCCTCTAGCTGCAGCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: GAPASSSWPRGPARA*SAFCPRAPLAAAGH
Trigger: GTGCCCAGCTGCAGCTAGAGGGGCGCGCGGGCAGAACGCGCTCCAGGCCCGGGCCGGCCCGCGCGGCCATGAAGATGATGCTGGTGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS TCA 90 bp CAGGGACCTTGGCGTCTGCAGATGGACCCGCCCGGGCTGCGGCGCTaGGGCTGCATTAGCGGGAGCACGGGTGTGGGAGGGGACGGAGCC +
Preference number: 5 (lower is better)
Translates to: QGPWRLQMDPPGLRR*GCISGSTGVGGDGA
Trigger: GGCTCCGTCCCCTCCCACACCCGTGCTCCCGCTAATGCAGCCTCAGCGCCGCAGCCCGGGCGGGTCCATCTGCAGACGCCAAGGTCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS GCA 90 bp CGCGCGCCGCGTCGCTCCAGCCTGGGCAGCAGGTCCAGGGCGATGTaGAGCGCGCAGGCCACCAGGAACACCATCAGGATGAGCACGCGG +
Preference number: 5 (lower is better)
Translates to: RAPRRSSLGSRSRAM*SAQATRNTIRMSTR
Trigger: CCGCGTGCTCATCCTGATGGTGTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGGACCTGCTGCCCAGGCTGGAGCGACGCGGCGCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS GCA 90 bp TTGGAGGAGGGGTCGGAGCTGAAGTCCTGCAGGATGCGGAGCGTGTaGTTGTTGGGCCAGCCCGCGTCGCCGGCGGCGGAGGAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LEEGSELKSCRMRSV*LLGQPASPAAEEAA
Trigger: GGCCGCCTCCTCCGCCGCCGGCGACGCGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS GCA 90 bp CACTGCGGCAGGGACCTTGGCGTCTGCAGATGGACCCGCCCGGGCTaGGGCGCTGAGGCTGCATTAGCGGGAGCACGGGTGTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: HCGRDLGVCRWTRPG*GAEAALAGARVWEG
Trigger: CCCCTCCCACACCCGTGCTCCCGCTAATGCAGCCTCAGCGCCGCAGCCCGGGCGGGTCCATCTGCAGACGCCAAGGTCCCTGCCGCAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CCA 90 bp GCGCGCTCGGCCGGCTCGGCCGCGGGCGGCAGTTTCTCCAGCGAGTaGGACGAGAGGTTGGAGGAGGGGTCGGAGCTGAAGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ARSAGSAAGGSFSSE*DERLEEGSELKSCR
Trigger: CCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGAAACTGCCGCCCGCGGCCGAGCCGGCCGAGCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS-3UTR CAA 90 bp GGCATCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCGGAGCGTGTGCTTGTaGGGCCAGCCCGCGTCGCCG +
Preference number: 5 (lower is better)
Translates to: GIRPPAHRPDVQREPPPVRSVCL*GQPASP
Trigger: CGGCGACGCGGGCTGGCCCAACAAGCACACGCTCCG...GACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGATGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCCAGCGGGCGGACTCGACGGGCGCATGCGCTaGCTGGGAGGTCCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: PTVHSQVRGGCCRPAGGLDGRMR*LGGPAP
Trigger: AGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTC...GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS TCA 90 bp CGCAGGAGTGAGGAGAGGGACGGGGCGAGAGCAGAGCTCAAACGCTaGGAGGCCCCGATTCGAGGGACCTGGTGGGCAGGCCGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: RRSEERDGARAELKR*EAPIRGTWWAGRPG
Trigger: CCCGGGCCGGCCTGCCCACCAGGTCCCTCGAATCGGGGCCTCTCAGCGTTTGAGCTCTGCTCTCGCCCCGTCCCTCTCCTCACTCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CCA 90 bp TCGGAGGTCCCACTCCCGGGGCGGCCCTCCCTCCTGGTTGGGGCCTaGGGCCGCCCTCTGCATCTGGCTCTGAGATGGGCCTTTGCGACA +
Preference number: 5 (lower is better)
Translates to: SEVPLPGRPSLLVGA*GRPLHLALRWAFAT
Trigger: TGTCGCAAAGGCCCATCTCAGAGCCAGATGCAGAGGGCGGCCCCAGGCCCCAACCAGGAGGGAGGGCCGCCCCGGGAGTGGGACCTCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CCA 90 bp CACAGTCACACCGCAGGGGAGAGGCTGGGCTCGGTGTCCCAGGCCTaGCTCAGCCCCGGTTTGCTGTGTGCACCCTGGCACCGCCCACCC +
Preference number: 5 (lower is better)
Translates to: HSHTAGERLGSVSQA*LSPGLLCAPWHRPP
Trigger: GGGTGGGCGGTGCCAGGGTGCACACAGCAAACCGGGGCTGAGCCAGGCCTGGGACACCGAGCCCAGCCTCTCCCCTGCGGTGTGACTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515795.1
ENST00000672379.1
CDS-3UTR CAA 90 bp CCTCCTCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGGGTTCTCCGCCGCTTaGGGGCTGAGCCTGGTGTCG +
Preference number: 5 (lower is better)
Translates to: PPPVLRRDPPALQEPRPQGFSAA*GLSLVS
Trigger: CGACACCAGGCTCAGCCCCAAAGCGGCGGAGAACCC...CTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CGACGGGCGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCGTCCTCCAGAGCTTCTaGTCCCGTGTGACGTCCCGG +
Preference number: 5 (lower is better)
Translates to: RRAHALAGRSGASVSVPGVLQSF*SRVTSR
Trigger: CCGGGACGTCACACGGGACAAGAAGCTCTGGAGGAC...GCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS GCA 90 bp GGCAGCGCAGCGGCCGGCGGACACTACCTCGCCGAGGCGGCTCTGTaGTCAGTGTCCAGGTCGTCATCCACCACGCTGTGGAGCCCGTTC +
Preference number: 5 (lower is better)
Translates to: GSAAAGGHYLAEAAL*SVSRSSSTTLWSPF
Trigger: GAACGGGCTCCACAGCGTGGTGGATGACGACCTGGACACTGAGCACAGAGCCGCCTCGGCGAGGTAGTGTCCGCCGGCCGCTGCGCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS-3UTR CAA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTACGGAGCGTGTGCTTGTaGGGCCAGCCCGCGTCGCCG +
Preference number: 5 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVRSVCL*GQPASP
Trigger: CGGCGACGCGGGCTGGCCCAACAAGCACACGCTCCG...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp GAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCACAGACAGCGACGGGCGCATGCGCTaGCTGGGAGGTCCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: ERMECLRRRPPLSVSTDSDGRMR*LGGPAP
Trigger: AGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTC...GCTGTCTGTGCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS GCA 90 bp GTTGGGATAGGAGTCCACGGCCGCCTCCCCGGGGGAGAGGAATTCTaGACCTTCAGCACCCGCATGCGGCCAGTCCGGGTTCTCCGCCGC +
Preference number: 5 (lower is better)
Translates to: VGIGVHGRLPGGEEF*TFSTRMRPVRVLRR
Trigger: GCGGCGGAGAACCCGGACTGGCCGCATGCGGGTGCTGAAGGTGCAGAATTCCTCTCCCCCGGGGAGGCGGCCGTGGACTCCTATCCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS-3UTR CAA 90 bp GCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAGACGAGACCCTCCATGCGGAGCGTGTGCTaGTTGGGCCAGCCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: AQARRPARASSRPQTRPSMRSVC*LGQPAS
Trigger: CGACGCGGGCTGGCCCAACAAGCACACGCTCCGCAT...GGAGGGTCTCGTCTGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS GCA 90 bp CCCCTCCCAGTGGAGCCCCCTCCTCTCCACACGGCCTGGCTGGCGTaGACGGCTCTGAAGTGCTCGTTCCTCCTCAGGATCGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: PLPVEPPPLHTAWLA*TALKCSFLLRIGHC
Trigger: ACAGTGCCCGATCCTGAGGAGGAACGAGCACTTCAGAGCCGTGCACGCCAGCCAGGCCGTGTGGAGAGGAGGGGGCTCCACTGGGAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS GCA 90 bp CCAGGTAACACCAGCTCTGCCGGGACTTGGTCTGCAGCATTCCTGTaGCTCGGAGGTCCCACTCCCGGGGCGGCCCTCCCTCCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: PGNTSSAGTWSAAFL*LGGPTPGAALPPGW
Trigger: CCAACCAGGAGGGAGGGCCGCCCCGGGAGTGGGACCTCCGAGGCACAGGAATGCTGCAGACCAAGTCCCGGCAGAGCTGGTGTTACCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CCA 90 bp GGTCCTCAGCCCCTCCCAGTGGAGCCCCCTCCTCTCCACACGGCCTaGCTGGCGTGCACGGCTCTGAAGTGCTCGTTCCTCCTCAGGATC +
Preference number: 5 (lower is better)
Translates to: GPQPLPVEPPPLHTA*LACTALKCSFLLRI
Trigger: GATCCTGAGGAGGAACGAGCACTTCAGAGCCGTGCACGCCAGCCAGGCCGTGTGGAGAGGAGGGGGCTCCACTGGGAGGGGCTGAGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS-3UTR CAA 90 bp GAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCACAGACAGCATGCGGAGCGTGTGCTaGTTGGGCCAGCCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: ERMECLRRRPPLSVSTDSMRSVC*LGQPAS
Trigger: CGACGCGGGCTGGCCCAACAAGCACACGCTCCGCAT...GCTGTCTGTGCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGGGGGTTCTCCGCCGCTTaGGGGCTGAGCCTGGTGTCG +
Preference number: 5 (lower is better)
Translates to: QRADSQDAWSSGPPKPRRGFSAA*GLSLVS
Trigger: CGACACCAGGCTCAGCCCCAAAGCGGCGGAGAACCC...CCTACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp GAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCACAGACAGCCGCCAGGTCTTCCTCTaGGCCAGGGACAGGTCGGGC +
Preference number: 5 (lower is better)
Translates to: ERMECLRRRPPLSVSTDSRQVFL*ARDRSG
Trigger: GCCCGACCTGTCCCTGGCCAAGAGGAAGACCTGGCG...GCTGTCTGTGCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTACGCCAGGTCTTCCTCTaGGCCAGGGACAGGTCGGGC +
Preference number: 5 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVRQVFL*ARDRSG
Trigger: GCCCGACCTGTCCCTGGCCAAGAGGAAGACCTGGCG...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS TCA 90 bp CCAGGGCGATGTGCAGCGCGCAGGCCACCAGGAACACCATCAGGATaGGCACGCGGAACCGGCGCACCAGCATCATCTTCATGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: PGRCAARRPPGTPSG*ARGTGAPASSSWPR
Trigger: GCGCGGCCATGAAGATGATGCTGGTGCGCCGGTTCCGCGTGCTCATCCTGATGGTGTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS TCA 90 bp GCCTCCAGGGGCCGGAGGCAGGCGGGACGTGCTGGGTTCCTCATATaGAAAATGCGGTGGAGCTCCAGCCTCCTCAGGGCCACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: ASRGRRQAGRAGFLI*KMRWSSSLLRATLS
Trigger: GCTCAGGGTGGCCCTGAGGAGGCTGGAGCTCCACCGCATTTTTCATATGAGGAACCCAGCACGTCCCGCCTGCCTCCGGCCCCTGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515795.1
ENST00000672379.1
CDS CCA 90 bp GGACAGGTCGGGCAGGAAGGCCGCCAGCGAGCCCTCGATCTGGTCTaGCTTCCCGCACAGGGCGTGCTCCGTGGAGCAGTAGTAGGAACA +
Preference number: 5 (lower is better)
Translates to: GQVGQEGRQRALDLV*LPAQGVLRGAVVGT
Trigger: TGTTCCTACTACTGCTCCACGGAGCACGCCCTGTGCGGGAAGCCAGACCAGATCGAGGGCTCGCTGGCGGCCTTCCTGCCCGACCTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS TCA 90 bp CCTCCCTCCTGGTTGGGGCCTGGGGCCGCCCTCTGCATCTGGCTCTaGGATGGGCCTTTGCGACATTCCCATCCCTCCACTGGAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PPSWLGPGAALCIWL*DGPLRHSHPSTGGS
Trigger: AGACCCTCCAGTGGAGGGATGGGAATGTCGCAAAGGCCCATCTCAGAGCCAGATGCAGAGGGCGGCCCCAGGCCCCAACCAGGAGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS TCA 90 bp TCATATGAAAAATGCGGTGGAGCTCCAGCCTCCTCAGGGCCACCCTaGGCCTTCGGGACCCTGGGCACCCAGCTGCCGACGGGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: SYEKCGGAPASSGPP*AFGTLGTQLPTGPQ
Trigger: CTGAGGGCCCGTCGGCAGCTGGGTGCCCAGGGTCCCGAAGGCTCAGGGTGGCCCTGAGGAGGCTGGAGCTCCACCGCATTTTTCATATGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515795.1
ENST00000672379.1
CDS GCA 90 bp GTTGGGATAGGAGTCCACGGCCGCCTCCCCGGGGGAGAGGAATTCTaGACCTTCAGCACCCGCATGCGGCCCTCTGGAGACACCACAGAC +
Preference number: 5 (lower is better)
Translates to: VGIGVHGRLPGGEEF*TFSTRMRPSGDTTD
Trigger: GTCTGTGGTGTCTCCAGAGGGCCGCATGCGGGTGCTGAAGGTGCAGAATTCCTCTCCCCCGGGGAGGCGGCCGTGGACTCCTATCCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477004.1
ENST00000632495.1
ENST00000673544.1
CDS CCA 90 bp GAGGCGGCTCTGTGCTCAGTGTCCAGGTCGTCATCCACCACGCTGTaGAGCCCGTTCCTCTCCACGCAGTCCCGGACGGCCTTTAGCACG +
Preference number: 5 (lower is better)
Translates to: EAALCSVSRSSSTTL*SPFLSTQSRTAFST
Trigger: CGTGCTAAAGGCCGTCCGGGACTGCGTGGAGAGGAACGGGCTCCACAGCGTGGTGGATGACGACCTGGACACTGAGCACAGAGCCGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS CCA 90 bp CTCCTGGTTGGGGCCTGGGGCCGCCCTCTGCATCTGGCTCTGAGATaGGCCTTTGCGACATTCCCATCCCTCCACTGGAGGGTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LLVGAWGRPLHLALR*AFATFPSLHWRVCS
Trigger: GGAGCAGACCCTCCAGTGGAGGGATGGGAATGTCGCAAAGGCCCATCTCAGAGCCAGATGCAGAGGGCGGCCCCAGGCCCCAACCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CCA 90 bp TCTCCTGGCCTCCGTTTCCCAGGTAACACCAGCTCTGCCGGGACTTaGTCTGCAGCATTCCTGTGCCTCGGAGGTCCCACTCCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: SPGLRFPGNTSSAGT*SAAFLCLGGPTPGA
Trigger: CGCCCCGGGAGTGGGACCTCCGAGGCACAGGAATGCTGCAGACCAAGTCCCGGCAGAGCTGGTGTTACCTGGGAAACGGAGGCCAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS-3UTR CAA 90 bp CAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGGGCCTCGATGGCCGGGTaGTGTCTGGAGTACAGCTCG +
Preference number: 5 (lower is better)
Translates to: QRADSQDAWSSGPPKPRRASMAG*CLEYSS
Trigger: CGAGCTGTACTCCAGACACAACCCGGCCATCGAGGC...CCTACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp GCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGCCTCGATGGCCGGGTaGTGTCTGGAGTACAGCTCG +
Preference number: 5 (lower is better)
Translates to: ASGRTRRTPGHRVLQNHVASMAG*CLEYSS
Trigger: CGAGCTGTACTCCAGACACAACCCGGCCATCGAGGC...TACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp TCCCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGATCTCCTTGGTCATGTaGACCATCCTGCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: SRPQTRPSSPPGAEAPGRISLVM*TILPAT
Trigger: CGTGGCCGGCAGGATGGTCAACATGACCAAGGAGAT...CCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGAAGCTTGTACTCCTCCTaGGCCAGGAGCTGCAGACGC +
Preference number: 5 (lower is better)
Translates to: RPQTRPSSPPGAEAPGRRSLYSS*ARSCRR
Trigger: GCGTCTGCAGCTCCTGGCCAAGGAGGAGTACAAGCT...TCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS GCA 90 bp CCCGACTTCATGGCCACGCTGGTGATCCTCTGGGAGCTGAGGTCGTaGAGCAGGGCCTCGATGGCCGGGTTGTGTCTGGAGTACAGCTCG +
Preference number: 5 (lower is better)
Translates to: PDFMATLVILWELRS*SRASMAGLCLEYSS
Trigger: CGAGCTGTACTCCAGACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGCCATGAAGTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000477004.1
ENST00000672066.1
ENST00000673544.1
CDS GCA 90 bp CCCGAACGCCCTGGCTGGTGTGCACGGCTCTCTCATTCCTCTCCCTaGCAAGACGGACCCACCTGGAAGGTAAGCTGCCCGACAGACCCT +
Preference number: 5 (lower is better)
Translates to: PERPGWCARLSHSSP*QDGPTWKVSCPTDP
Trigger: AGGGTCTGTCGGGCAGCTTACCTTCCAGGTGGGTCCGTCTTGGCAGGGAGAGGAATGAGAGAGCCGTGCACACCAGCCAGGGCGTTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS-3UTR CAA 90 bp GAAAGGATGGAATGCCTCCGGCGCCGGCCGCCTCTGTCCGTGAGCACAGACAGCAGCTTGTACTCCTCCTaGGCCAGGAGCTGCAGACGC +
Preference number: 5 (lower is better)
Translates to: ERMECLRRRPPLSVSTDSSLYSS*ARSCRR
Trigger: GCGTCTGCAGCTCCTGGCCAAGGAGGAGTACAAGCT...GCTGTCTGTGCTCACGGACAGAGGCGGCCGGCGCCGGAGGCATTCCATCCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGGTCCTCGTGTTTGGTTaGGTAGGTGATTGGCATCTG +
Preference number: 5 (lower is better)
Translates to: RMRLLGGPAPLSPSRAAQVLVFG*VGDWHL
Trigger: CAGATGCCAATCACCTACCAAACCAAACACGAGGAC...CTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp ACGACGGGCGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGTACAGCTCGTACCGGTaGATACCAATGTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: TTGACACWEVRRLCLRPGYSSYR*IPMWNL
Trigger: CAAGTTCCACATTGGTATCAACCGGTACGAGCTGTA...CCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCGCCCGTCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CGCATGCGCTTGCTGGGAGGTCCGGCGCCTCTGTCTCCGTCCCGGGCAGCGCAGTACAGCTCGTACCGGTaGATACCAATGTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: RMRLLGGPAPLSPSRAAQYSSYR*IPMWNL
Trigger: CAAGTTCCACATTGGTATCAACCGGTACGAGCTGTA...CTGCGCTGCCCGGGACGGAGACAGAGGCGCCGGACCTCCCAGCAAGCGCATGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CCGTCCTCAGACGAGACCCTCCAGCCCTCCAGGAGCCGAGGCCCCAGGAAGGAGGGGTTTGAACAGCGCTaGCCCGTAATTCTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: PSSDETLQPSRSRGPRKEGFEQR*PVILEG
Trigger: ACCTTCCAGAATTACGGGCAAGCGCTGTTCAAACCC...CTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGGGTCTCGTCTGAGGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp TCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCAACGTCCCGGATCTCCTaGGTCATGTTGACCATCCTG +
Preference number: 5 (lower is better)
Translates to: SVHQRTGQTSSESLLPSSTSRIS*VMLTIL
Trigger: CAGGATGGTCAACATGACCAAGGAGATCCGGGACGT...TGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp AGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGACGTCCCGGATCTCCTaGGTCATGTTGACCATCCTG +
Preference number: 5 (lower is better)
Translates to: RPAGGLAGRLVIGSSKTTTSRIS*VMLTIL
Trigger: CAGGATGGTCAACATGACCAAGGAGATCCGGGACGT...CGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS GCA 90 bp GTGCACGGCTCTGAAGTGCTCGTTCCTCCTCAGGATCGGGCACTGTaGGTGTGTGTCTCTTCCTGGGGCTGTCAGGTCCACAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: VHGSEVLVPPQDRAL*VCVSSWGCQVHRGS
Trigger: GCTGCCTCTGTGGACCTGACAGCCCCAGGAAGAGACACACACGCACAGTGCCCGATCCTGAGGAGGAACGAGCACTTCAGAGCCGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS GCA 90 bp TCTCATTCCTCTCCCTGCCAAGACGGACCCACCTGGAAGGTAAGCTaGCCGACAGACCCTGTGGAAGGTCCTCAGCCCCTCCCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: SHSSPCQDGPTWKVS*PTDPVEGPQPLPVE
Trigger: CTCCACTGGGAGGGGCTGAGGACCTTCCACAGGGTCTGTCGGGCAGCTTACCTTCCAGGTGGGTCCGTCTTGGCAGGGAGAGGAATGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CCA 90 bp TGTGCACGGCTCTCTCATTCCTCTCCCTGCCAAGACGGACCCACCTaGAAGGTAAGCTGCCCGACAGACCCTGTGGAAGGTCCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: CARLSHSSPCQDGPT*KVSCPTDPVEGPQP
Trigger: GGGCTGAGGACCTTCCACAGGGTCTGTCGGGCAGCTTACCTTCCAGGTGGGTCCGTCTTGGCAGGGAGAGGAATGAGAGAGCCGTGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CCA 90 bp TGGGGACTTTCTAACTTGCGTGCTGCTCCTCCCGAACGCCCTGGCTaGTGTGCACGGCTCTCTCATTCCTCTCCCTGCCAAGACGGACCC +
Preference number: 5 (lower is better)
Translates to: WGLSNLRAAPPERPG*CARLSHSSPCQDGP
Trigger: GGGTCCGTCTTGGCAGGGAGAGGAATGAGAGAGCCGTGCACACCAGCCAGGGCGTTCGGGAGGAGCAGCACGCAAGTTAGAAAGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS-3UTR CAA 90 bp CAGGCCAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGGGTTTGAACAGCGCTaGCCCGTAATTCTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: QASGRTRRTPGHRVLQNHGFEQR*PVILEG
Trigger: ACCTTCCAGAATTACGGGCAAGCGCTGTTCAAACCC...GTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCCAGCGGGCGGACTCGTCCTCGTGTTTGGTTaGGTAGGTGATTGGCATCTG +
Preference number: 5 (lower is better)
Translates to: PTVHSQVRGGCCRPAGGLVLVFG*VGDWHL
Trigger: CAGATGCCAATCACCTACCAAACCAAACACGAGGAC...GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS GCA 90 bp CCAGTAAAATCTGCCACGCTGGTGATCCTCTGGGAGCTGAGGTCGTaGAGCAGGGCCTCGATGGCCGGGTTGTGTCTGGAGTACAGCTCG +
Preference number: 5 (lower is better)
Translates to: PVKSATLVILWELRS*SRASMAGLCLEYSS
Trigger: CGAGCTGTACTCCAGACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGCAGATTTTACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CCA 90 bp GCGAGCCCTCGATCTGGTCTGGCTTCCCGCACAGGGCGTGCTCCGTaGAGCAGTAGTAGGAACACTCGCCGTAGAAGCAGATGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: ASPRSGLASRTGRAP*SSSRNTRRRSRCCW
Trigger: CCAACAACATCTGCTTCTACGGCGAGTGTTCCTACTACTGCTCCACGGAGCACGCCCTGTGCGGGAAGCCAGACCAGATCGAGGGCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS CCA 90 bp GACATGCAGGAGGTGCCAGTAAAATCTGCCACGCTGGTGATCCTCTaGGAGCTGAGGTCGTGCAGCAGGGCCTCGATGGCCGGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: DMQEVPVKSATLVIL*ELRSCSRASMAGLC
Trigger: ACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGCAGATTTTACTGGCACCTCCTGCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS-3UTR CAA 90 bp GAGGGGCCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATATCTCCTTGGTCATGTaGACCATCCTGCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: EGPPEPGRAVLVFGLVGDISLVM*TILPAT
Trigger: CGTGGCCGGCAGGATGGTCAACATGACCAAGGAGAT...ATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGGCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CCCCCAGAACCAGGGAGGGCGGTCCTCGTGTTTGGTTTGGTAGGTGATTGGCATGTCCTCCAGAGCTTCTaGTCCCGTGTGACGTCCCGG +
Preference number: 5 (lower is better)
Translates to: PPEPGRAVLVFGLVGDWHVLQSF*SRVTSR
Trigger: CCGGGACGTCACACGGGACAAGAAGCTCTGGAGGAC...ATGCCAATCACCTACCAAACCAAACACGAGGACCGCCCTCCCTGGTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS CCA 90 bp TCTGTGGGGAAACAGGACCTGGACTACACACTCACGAGGACAACGTaGGGCGGAAAGAACAGGGGCCGTTTCTCCCGCAGGAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: SVGKQDLDYTLTRTT*GGKNRGRFSRRSEE
Trigger: CTCCTCACTCCTGCGGGAGAAACGGCCCCTGTTCTTTCCGCCCCACGTTGTCCTCGTGAGTGTGTAGTCCAGGTCCTGTTTCCCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS-3UTR CAA 90 bp TCCGTCCACCAGCGCACAGGCCAGACGTCCAGCGAGAGCCTCCTCCCGTCCTCACCAAACCCTCTTCCATaGTCTAAGTGGATGATGAAC +
Preference number: 5 (lower is better)
Translates to: SVHQRTGQTSSESLLPSSPNPLP*SKWMMN
Trigger: GTTCATCATCCACTTAGACAATGGAAGAGGGTTTGG...TGAGGACGGGAGGAGGCTCTCGCTGGACGTCTGGCCTGTGCGCTGGTGGACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CAGCGGGCGGACTCGCAGGACGCCTGGTCATCGGGTCCTCCAAAACCACGTAGGCCAAACCCTCTTCCATaGTCTAAGTGGATGATGAAC +
Preference number: 5 (lower is better)
Translates to: QRADSQDAWSSGPPKPRRPNPLP*SKWMMN
Trigger: GTTCATCATCCACTTAGACAATGGAAGAGGGTTTGG...CCTACGTGGTTTTGGAGGACCCGATGACCAGGCGTCCTGCGAGTCCGCCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS CCA 90 bp AGGTGGACTTCCGGATCCTGCAGCACTGCTGTAGCGGCACCAGGATaGAGAGCTCGTCGTGCGAATACTTCCCAAACCCTCTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: RWTSGSCSTAVAAPG*RARRANTSQTLFHC
Trigger: ACAATGGAAGAGGGTTTGGGAAGTATTCGCACGACGAGCTCTCCATCCTGGTGCCGCTACAGCAGTGCTGCAGGATCCGGAAGTCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS-3UTR CAA 90 bp CCAACCGTCCACAGCCAAGTCCGAGGTGGGTGCTGCAGGCCAGCGGGCGGACTCTCTGCTGTACCTTTATaGCACTTTTATGACATTGCA +
Preference number: 5 (lower is better)
Translates to: PTVHSQVRGGCCRPAGGLSAVPL*HFYDIA
Trigger: TGCAATGTCATAAAAGTGCAATAAAGGTACAGCAGA...GAGTCCGCCCGCTGGCCTGCAGCACCCACCTCGGACTTGGCTGTGGACGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp CTCGTGTTTGGTTTGGTAGGTGATTGGCATCTGTGTACACGTCTCTGTTTATATGTGTCGCTGTTCACATaGAACAGGACGTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LVFGLVGDWHLCTRLCLYVSLFT*NRTSSS
Trigger: GGAGGAGGACGTCCTGTTCAATGTGAACAGCGACAC...ATATAAACAGAGACGTGTACACAGATGCCAATCACCTACCAAACCAAACACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS-3UTR CAA 90 bp TTTTATGACATTGCAAACTATTCCACAAAACTCTGCAAAGGTCAGCCCACAGCTTCTGCTGTACCTTTATaGCACTTTTATGACATTGCA +
Preference number: 5 (lower is better)
Translates to: FYDIANYSTKLCKGQPTASAVPL*HFYDIA
Trigger: TGCAATGTCATAAAAGTGCAATAAAGGTACAGCAGA...AGCTGTGGGCTGACCTTTGCAGAGTTTTGTGGAATAGTTTGCAATGTCATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS GCA 72 bp GAGCGCGGCGCCGCCTCGCGGGTCAAGGTCCATCGGTaGCGGGCGGCTACCAGCTCCGGGGCTGTCCCCGGG +
Preference number: 6 (lower is better)
Translates to: ERGAASRVKVHR*RAATSSGAVPG
Trigger: CCCGGGGACAGCCCCGGAGCTGGTAGCCGCCCGGCACCGATGGACCTTGACCCGCGAGGCGGCGCCGCGCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS GCA 72 bp GGCCTGGAGCGCGTTCTGCCCGCGCGCCCCTCTAGCTaGAGCTGGGCACGAGCGCGGCGCCGCCTCGCGGGT +
Preference number: 6 (lower is better)
Translates to: GLERVLPARPSS*SWARARRRLAG
Trigger: ACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCTGCAGCTAGAGGGGCGCGCGGGCAGAACGCGCTCCAGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CAA 90 bp GAGGGGTCGGAGCTGAAGTCCTGCAGGATGCGGAGCGTGTGCTTGTaGGGCCAGCCCGCGTCGCCGGCGGCGGAGGAGGCGGCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: EGSELKSCRMRSVCL*GQPASPAAEEAAGG
Trigger: GCCCCCGGCCGCCTCCTCCGCCGCCGGCGACGCGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CCA 72 bp GAGCGCGTTCTGCCCGCGCGCCCCTCTAGCTGCAGCTaGGCACGAGCGCGGCGCCGCCTCGCGGGTCAAGGT +
Preference number: 6 (lower is better)
Translates to: ERVLPARPSSCS*ARARRRLAGQG
Trigger: ACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCTGCAGCTAGAGGGGCGCGCGGGCAGAACGCGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CCA 72 bp GAACCGCCACCCGGTAAAGCGGGTGCTCGAACAGCCTaGCCAGGAGGGAGGCGTCTCCGCCGGGGCCGGGGG +
Preference number: 6 (lower is better)
Translates to: EPPPGKAGARTA*PGGRRLRRGRG
Trigger: CCCCCGGCCCCGGCGGAGACGCCTCCCTCCTGGCCAGGCTGTTCGAGCACCCGCTTTACCGGGTGGCGGTTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CCA 72 bp CCACTCCCGGGGCGGCCCTCCCTCCTGGTTGGGGCCTaGGGCCGCCCTCTGCATCTGGCTCTGAGATGGGCC +
Preference number: 6 (lower is better)
Translates to: PLPGRPSLLVGA*GRPLHLALRWA
Trigger: GGCCCATCTCAGAGCCAGATGCAGAGGGCGGCCCCAGGCCCCAACCAGGAGGGAGGGCCGCCCCGGGAGTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CAA 90 bp GAGGAGGGGTCGGAGCTGAAGTCCTGCAGGATGCGGAGCGTGTGCTaGTTGGGCCAGCCCGCGTCGCCGGCGGCGGAGGAGGCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: EEGSELKSCRMRSVC*LGQPASPAAEEAAG
Trigger: CCCGGCCGCCTCCTCCGCCGCCGGCGACGCGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CCA 72 bp TGCGGCGCTGAGGCTGCATTAGCGGGAGCACGGGTGTaGGAGGGGACGGAGCCGCTCTGCCCTGCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: CGAEAALAGARV*EGTEPLCPASG
Trigger: CCCCGAGGCAGGGCAGAGCGGCTCCGTCCCCTCCCACACCCGTGCTCCCGCTAATGCAGCCTCAGCGCCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS TCA 72 bp TGGCGTCTGCAGATGGACCCGCCCGGGCTGCGGCGCTaGGGCTGCATTAGCGGGAGCACGGGTGTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: WRLQMDPPGLRR*GCISGSTGVGG
Trigger: CCCTCCCACACCCGTGCTCCCGCTAATGCAGCCTCAGCGCCGCAGCCCGGGCGGGTCCATCTGCAGACGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS GCA 72 bp GGGTCGGAGCTGAAGTCCTGCAGGATGCGGAGCGTGTaGTTGTTGGGCCAGCCCGCGTCGCCGGCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: GSELKSCRMRSV*LLGQPASPAAE
Trigger: CTCCGCCGCCGGCGACGCGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CAA 72 bp GAGCTGAAGTCCTGCAGGATGCGGAGCGTGTGCTTGTaGGGCCAGCCCGCGTCGCCGGCGGCGGAGGAGGCG +
Preference number: 6 (lower is better)
Translates to: ELKSCRMRSVCL*GQPASPAAEEA
Trigger: CGCCTCCTCCGCCGCCGGCGACGCGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS GCA 72 bp AGGGACCTTGGCGTCTGCAGATGGACCCGCCCGGGCTaGGGCGCTGAGGCTGCATTAGCGGGAGCACGGGTG +
Preference number: 6 (lower is better)
Translates to: RDLGVCRWTRPG*GAEAALAGARV
Trigger: CACCCGTGCTCCCGCTAATGCAGCCTCAGCGCCGCAGCCCGGGCGGGTCCATCTGCAGACGCCAAGGTCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CCA 72 bp GCCGGCTCGGCCGCGGGCGGCAGTTTCTCCAGCGAGTaGGACGAGAGGTTGGAGGAGGGGTCGGAGCTGAAG +
Preference number: 6 (lower is better)
Translates to: AGSAAGGSFSSE*DERLEEGSELK
Trigger: CTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGAAACTGCCGCCCGCGGCCGAGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CCA 72 bp AGGTCGGGCAGGAAGGCCGCCAGCGAGCCCTCGATCTaGTCTGGCTTCCCGCACAGGGCGTGCTCCGTGGAG +
Preference number: 6 (lower is better)
Translates to: RSGRKAASEPSI*SGFPHRACSVE
Trigger: CTCCACGGAGCACGCCCTGTGCGGGAAGCCAGACCAGATCGAGGGCTCGCTGGCGGCCTTCCTGCCCGACCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS CAA 72 bp TCGGAGCTGAAGTCCTGCAGGATGCGGAGCGTGTGCTaGTTGGGCCAGCCCGCGTCGCCGGCGGCGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SELKSCRMRSVC*LGQPASPAAEE
Trigger: CTCCTCCGCCGCCGGCGACGCGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CAA 90 bp GGCTCGGCCGCGGGCGGCAGTTTCTCCAGCGAGTGGGACGAGAGGTaGGAGGAGGGGTCGGAGCTGAAGTCCTGCAGGATGCGGAGCGTG +
Preference number: 6 (lower is better)
Translates to: GSAAGGSFSSEWDER*EEGSELKSCRMRSV
Trigger: CACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGAAACTGCCGCCCGCGGCCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS TCA 72 bp AAATGCGGTGGAGCTCCAGCCTCCTCAGGGCCACCCTaGGCCTTCGGGACCCTGGGCACCCAGCTGCCGACG +
Preference number: 6 (lower is better)
Translates to: KCGGAPASSGPP*AFGTLGTQLPT
Trigger: CGTCGGCAGCTGGGTGCCCAGGGTCCCGAAGGCTCAGGGTGGCCCTGAGGAGGCTGGAGCTCCACCGCATTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515795.1
ENST00000672379.1
CDS GCA 72 bp GGAGTCCACGGCCGCCTCCCCGGGGGAGAGGAATTCTaGACCTTCAGCACCCGCATGCGGCCAGTCCGGGTT +
Preference number: 6 (lower is better)
Translates to: GVHGRLPGGEEF*TFSTRMRPVRV
Trigger: AACCCGGACTGGCCGCATGCGGGTGCTGAAGGTGCAGAATTCCTCTCCCCCGGGGAGGCGGCCGTGGACTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS GCA 72 bp GCGGCCGGCGGACACTACCTCGCCGAGGCGGCTCTGTaGTCAGTGTCCAGGTCGTCATCCACCACGCTGTGG +
Preference number: 6 (lower is better)
Translates to: AAGGHYLAEAAL*SVSRSSSTTLW
Trigger: CCACAGCGTGGTGGATGACGACCTGGACACTGAGCACAGAGCCGCCTCGGCGAGGTAGTGTCCGCCGGCCGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS GCA 72 bp GGAGTCCACGGCCGCCTCCCCGGGGGAGAGGAATTCTaGACCTTCAGCACCCGCATGCGGCCCTCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: GVHGRLPGGEEF*TFSTRMRPSGD
Trigger: GTCTCCAGAGGGCCGCATGCGGGTGCTGAAGGTGCAGAATTCCTCTCCCCCGGGGAGGCGGCCGTGGACTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477004.1
ENST00000632495.1
ENST00000673544.1
CDS GCA 72 bp ACCAGCTCTGCCGGGACTTGGTCTGCAGCATTCCTGTaGCTCGGAGGTCCCACTCCCGGGGCGGCCCTCCCT +
Preference number: 6 (lower is better)
Translates to: TSSAGTWSAAFL*LGGPTPGAALP
Trigger: AGGGAGGGCCGCCCCGGGAGTGGGACCTCCGAGGCACAGGAATGCTGCAGACCAAGTCCCGGCAGAGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CCA 72 bp GGGCAGGAAGGCCGCCAGCGAGCCCTCGATCTGGTCTaGCTTCCCGCACAGGGCGTGCTCCGTGGAGCAGTA +
Preference number: 6 (lower is better)
Translates to: GQEGRQRALDLV*LPAQGVLRGAV
Trigger: TACTGCTCCACGGAGCACGCCCTGTGCGGGAAGCCAGACCAGATCGAGGGCTCGCTGGCGGCCTTCCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS CCA 72 bp CAGGCCTGGCTCAGCCCCGGTTTGCTGTGTGCACCCTaGCACCGCCCACCCTCTGGTTTCCGAGTCTCCCCC +
Preference number: 6 (lower is better)
Translates to: QAWLSPGLLCAP*HRPPSGFRVSP
Trigger: GGGGGAGACTCGGAAACCAGAGGGTGGGCGGTGCCAGGGTGCACACAGCAAACCGGGGCTGAGCCAGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515795.1
ENST00000672379.1
CDS TCA 72 bp GAGGAGAGGGACGGGGCGAGAGCAGAGCTCAAACGCTaGGAGGCCCCGATTCGAGGGACCTGGTGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: EERDGARAELKR*EAPIRGTWWAG
Trigger: GCCTGCCCACCAGGTCCCTCGAATCGGGGCCTCTCAGCGTTTGAGCTCTGCTCTCGCCCCGTCCCTCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS GCA 72 bp CCGCCTATCCCCCGCTGGCTGGCTCCAGGTACCGCGTaGAGGCAGAGGCCCATCTATTCTGCACGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: PPIPRWLAPGTA*RQRPIYSARSC
Trigger: GCAGGACCGTGCAGAATAGATGGGCCTCTGCCTGCACGCGGTACCTGGAGCCAGCCAGCGGGGGATAGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS GCA 72 bp GGTGTCCCAGGCCTGGCTCAGCCCCGGTTTGCTGTGTaGACCCTGGCACCGCCCACCCTCTGGTTTCCGAGT +
Preference number: 6 (lower is better)
Translates to: GVPGLAQPRFAV*TLAPPTLWFPS
Trigger: ACTCGGAAACCAGAGGGTGGGCGGTGCCAGGGTGCACACAGCAAACCGGGGCTGAGCCAGGCCTGGGACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515795.1
ENST00000672379.1
CDS CAA 90 bp GGGTTCTCCGCCGCTTTGGGGCTGAGCCTGGTGTCGCTGTTCACATaGAACAGGACGTCCTCCTCCGTGAGCGGCGGAACCGCCACCCGG +
Preference number: 6 (lower is better)
Translates to: GFSAALGLSLVSLFT*NRTSSSVSGGTATR
Trigger: CCGGGTGGCGGTTCCGCCGCTCACGGAGGAGGACGTCCTGTTCAATGTGAACAGCGACACCAGGCTCAGCCCCAAAGCGGCGGAGAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS GCA 72 bp GTGGAGCCCCCTCCTCTCCACACGGCCTGGCTGGCGTaGACGGCTCTGAAGTGCTCGTTCCTCCTCAGGATC +
Preference number: 6 (lower is better)
Translates to: VEPPPLHTAWLA*TALKCSFLLRI
Trigger: GATCCTGAGGAGGAACGAGCACTTCAGAGCCGTGCACGCCAGCCAGGCCGTGTGGAGAGGAGGGGGCTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CCA 72 bp CTGTGCTCAGTGTCCAGGTCGTCATCCACCACGCTGTaGAGCCCGTTCCTCTCCACGCAGTCCCGGACGGCC +
Preference number: 6 (lower is better)
Translates to: LCSVSRSSSTTL*SPFLSTQSRTA
Trigger: GGCCGTCCGGGACTGCGTGGAGAGGAACGGGCTCCACAGCGTGGTGGATGACGACCTGGACACTGAGCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS CCA 72 bp GAGAAACACTGCGGCAGGGACCTTGGCGTCTGCAGATaGACCCGCCCGGGCTGCGGCGCTGAGGCTGCATTA +
Preference number: 6 (lower is better)
Translates to: EKHCGRDLGVCR*TRPGCGAEAAL
Trigger: TAATGCAGCCTCAGCGCCGCAGCCCGGGCGGGTCCATCTGCAGACGCCAAGGTCCCTGCCGCAGTGTTTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CCA 72 bp GGGGCCTGGGGCCGCCCTCTGCATCTGGCTCTGAGATaGGCCTTTGCGACATTCCCATCCCTCCACTGGAGG +
Preference number: 6 (lower is better)
Translates to: GAWGRPLHLALR*AFATFPSLHWR
Trigger: CCTCCAGTGGAGGGATGGGAATGTCGCAAAGGCCCATCTCAGAGCCAGATGCAGAGGGCGGCCCCAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CAA 72 bp TTGTCCCGTGTGACGTCCCGGATCTCCTTGGTCATGTaGACCATCCTGCCGGCCACGGGAGGGACCCGGCGG +
Preference number: 6 (lower is better)
Translates to: LSRVTSRISLVM*TILPATGGTRR
Trigger: CCGCCGGGTCCCTCCCGTGGCCGGCAGGATGGTCAACATGACCAAGGAGATCCGGGACGTCACACGGGACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS TCA 72 bp GGCCGGAGGCAGGCGGGACGTGCTGGGTTCCTCATATaGAAAATGCGGTGGAGCTCCAGCCTCCTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: GRRQAGRAGFLI*KMRWSSSLLRA
Trigger: GGCCCTGAGGAGGCTGGAGCTCCACCGCATTTTTCATATGAGGAACCCAGCACGTCCCGCCTGCCTCCGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515795.1
ENST00000672379.1
CDS GCA 72 bp ATGGCCACGCTGGTGATCCTCTGGGAGCTGAGGTCGTaGAGCAGGGCCTCGATGGCCGGGTTGTGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: MATLVILWELRS*SRASMAGLCLE
Trigger: CTCCAGACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000477004.1
ENST00000672066.1
ENST00000673544.1
CDS GCA 72 bp TCTGCCACGCTGGTGATCCTCTGGGAGCTGAGGTCGTaGAGCAGGGCCTCGATGGCCGGGTTGTGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: SATLVILWELRS*SRASMAGLCLE
Trigger: CTCCAGACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS GCA 72 bp CTCCACACGGCCTGGCTGGCGTGCACGGCTCTGAAGTaGTCGTTCCTCCTCAGGATCGGGCACTGTGCGTGT +
Preference number: 6 (lower is better)
Translates to: LHTAWLACTALK*SFLLRIGHCAC
Trigger: ACACGCACAGTGCCCGATCCTGAGGAGGAACGAGCACTTCAGAGCCGTGCACGCCAGCCAGGCCGTGTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CAA 72 bp GCACCCGCATGCGGCCAGTCCGGGTTCTCCGCCGCTTaGGGGCTGAGCCTGGTGTCGCTGTTCACATTGAAC +
Preference number: 6 (lower is better)
Translates to: APACGQSGFSAA*GLSLVSLFTLN
Trigger: GTTCAATGTGAACAGCGACACCAGGCTCAGCCCCAAAGCGGCGGAGAACCCGGACTGGCCGCATGCGGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS CAA 90 bp AAGGTCCTCCAGAGCTTCTTGTCCCGTGTGACGTCCCGGATCTCCTaGGTCATGTTGACCATCCTGCCGGCCACGGGAGGGACCCGGCGG +
Preference number: 6 (lower is better)
Translates to: KVLQSFLSRVTSRIS*VMLTILPATGGTRR
Trigger: CCGCCGGGTCCCTCCCGTGGCCGGCAGGATGGTCAACATGACCAAGGAGATCCGGGACGTCACACGGGACAAGAAGCTCTGGAGGACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS TCA 72 bp TGGTTGGGGCCTGGGGCCGCCCTCTGCATCTGGCTCTaGGATGGGCCTTTGCGACATTCCCATCCCTCCACT +
Preference number: 6 (lower is better)
Translates to: WLGPGAALCIWL*DGPLRHSHPST
Trigger: AGTGGAGGGATGGGAATGTCGCAAAGGCCCATCTCAGAGCCAGATGCAGAGGGCGGCCCCAGGCCCCAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS GCA 72 bp TCTCCCTGCCAAGACGGACCCACCTGGAAGGTAAGCTaGCCGACAGACCCTGTGGAAGGTCCTCAGCCCCTC +
Preference number: 6 (lower is better)
Translates to: SPCQDGPTWKVS*PTDPVEGPQPL
Trigger: GAGGGGCTGAGGACCTTCCACAGGGTCTGTCGGGCAGCTTACCTTCCAGGTGGGTCCGTCTTGGCAGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS GCA 72 bp GGGCCGCCCTCTGCATCTGGCTCTGAGATGGGCCTTTaGGACATTCCCATCCCTCCACTGGAGGGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: GPPSASGSEMGL*DIPIPPLEGLL
Trigger: GAGCAGACCCTCCAGTGGAGGGATGGGAATGTCGCAAAGGCCCATCTCAGAGCCAGATGCAGAGGGCGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CAA 72 bp GCCGCTTTGGGGCTGAGCCTGGTGTCGCTGTTCACATaGAACAGGACGTCCTCCTCCGTGAGCGGCGGAACC +
Preference number: 6 (lower is better)
Translates to: AALGLSLVSLFT*NRTSSSVSGGT
Trigger: GGTTCCGCCGCTCACGGAGGAGGACGTCCTGTTCAATGTGAACAGCGACACCAGGCTCAGCCCCAAAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000630666.1
ENST00000633408.1
ENST00000672066.1
CDS GCA 72 bp GCTCATACGGACAGCGGCACTGGGGACTTTCTAACTTaGGTGCTGCTCCTCCCGAACGCCCTGGCTGGTGTG +
Preference number: 6 (lower is better)
Translates to: AHTDSGTGDFLT*VLLLPNALAGV
Trigger: CACACCAGCCAGGGCGTTCGGGAGGAGCAGCACGCAAGTTAGAAAGTCCCCAGTGCCGCTGTCCGTATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CCA 72 bp ACTCCTCCTTGGCCAGGAGCTGCAGACGCAGGTAGGTaGACTTCCGGATCCTGCAGCACTGCTGTAGCGGCA +
Preference number: 6 (lower is better)
Translates to: TPPWPGAADAGR*TSGSCSTAVAA
Trigger: TGCCGCTACAGCAGTGCTGCAGGATCCGGAAGTCCACCTACCTGCGTCTGCAGCTCCTGGCCAAGGAGGAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS CCA 72 bp GAGGTGCCAGTAAAATCTGCCACGCTGGTGATCCTCTaGGAGCTGAGGTCGTGCAGCAGGGCCTCGATGGCC +
Preference number: 6 (lower is better)
Translates to: EVPVKSATLVIL*ELRSCSRASMA
Trigger: GGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGCAGATTTTACTGGCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CCA 72 bp GAAAGCCTCCAGGGGCCGGAGGCAGGCGGGACGTGCTaGGTTCCTCATATGAAAAATGCGGTGGAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: ESLQGPEAGGTC*VPHMKNAVELQ
Trigger: CTGGAGCTCCACCGCATTTTTCATATGAGGAACCCAGCACGTCCCGCCTGCCTCCGGCCCCTGGAGGCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515795.1
ENST00000672379.1
CDS CAA 72 bp CAGAGCTTCTTGTCCCGTGTGACGTCCCGGATCTCCTaGGTCATGTTGACCATCCTGCCGGCCACGGGAGGG +
Preference number: 6 (lower is better)
Translates to: QSFLSRVTSRIS*VMLTILPATGG
Trigger: CCCTCCCGTGGCCGGCAGGATGGTCAACATGACCAAGGAGATCCGGGACGTCACACGGGACAAGAAGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS CCA 72 bp CGATCTGGTCTGGCTTCCCGCACAGGGCGTGCTCCGTaGAGCAGTAGTAGGAACACTCGCCGTAGAAGCAGA +
Preference number: 6 (lower is better)
Translates to: RSGLASRTGRAP*SSSRNTRRRSR
Trigger: TCTGCTTCTACGGCGAGTGTTCCTACTACTGCTCCACGGAGCACGCCCTGTGCGGGAAGCCAGACCAGATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS CCA 72 bp CCTCAGGATCGGGCACTGTGCGTGTGTGTCTCTTCCTaGGGCTGTCAGGTCCACAGAGGCAGCAGATCTCGT +
Preference number: 6 (lower is better)
Translates to: PQDRALCVCVSS*GCQVHRGSRSR
Trigger: ACGAGATCTGCTGCCTCTGTGGACCTGACAGCCCCAGGAAGAGACACACACGCACAGTGCCCGATCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CAA 72 bp GAGCTGAGGTCGTGCAGCAGGGCCTCGATGGCCGGGTaGTGTCTGGAGTACAGCTCGTACCGGTTGATACCA +
Preference number: 6 (lower is better)
Translates to: ELRSCSRASMAG*CLEYSSYRLIP
Trigger: TGGTATCAACCGGTACGAGCTGTACTCCAGACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313766.6
ENST00000471328.1
ENST00000477004.1
ENST00000630666.1
ENST00000632495.1
ENST00000633408.1
ENST00000634108.1
ENST00000672066.1
ENST00000672298.1
ENST00000673544.1
CDS GCA 72 bp TCTGAAGTGCTCGTTCCTCCTCAGGATCGGGCACTGTaGGTGTGTGTCTCTTCCTGGGGCTGTCAGGTCCAC +
Preference number: 6 (lower is better)
Translates to: SEVLVPPQDRAL*VCVSSWGCQVH
Trigger: GTGGACCTGACAGCCCCAGGAAGAGACACACACGCACAGTGCCCGATCCTGAGGAGGAACGAGCACTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CCA 72 bp TCCGGATCCTGCAGCACTGCTGTAGCGGCACCAGGATaGAGAGCTCGTCGTGCGAATACTTCCCAAACCCTC +
Preference number: 6 (lower is better)
Translates to: SGSCSTAVAAPG*RARRANTSQTL
Trigger: GAGGGTTTGGGAAGTATTCGCACGACGAGCTCTCCATCCTGGTGCCGCTACAGCAGTGCTGCAGGATCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS CCA 72 bp CTCTCTCATTCCTCTCCCTGCCAAGACGGACCCACCTaGAAGGTAAGCTGCCCGACAGACCCTGTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: LSHSSPCQDGPT*KVSCPTDPVEG
Trigger: ACCTTCCACAGGGTCTGTCGGGCAGCTTACCTTCCAGGTGGGTCCGTCTTGGCAGGGAGAGGAATGAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CCA 72 bp AAACAGGACCTGGACTACACACTCACGAGGACAACGTaGGGCGGAAAGAACAGGGGCCGTTTCTCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: KQDLDYTLTRTT*GGKNRGRFSRR
Trigger: CCTGCGGGAGAAACGGCCCCTGTTCTTTCCGCCCCACGTTGTCCTCGTGAGTGTGTAGTCCAGGTCCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CAA 72 bp CTGGGGCTGTCAGGTCCACAGAGGCAGCAGATCTCGTaGAGGCTGAACTCATCCTCAACTCCCCACCACCCA +
Preference number: 6 (lower is better)
Translates to: LGLSGPQRQQIS*RLNSSSTPHHP
Trigger: TGGGTGGTGGGGAGTTGAGGATGAGTTCAGCCTCAACGAGATCTGCTGCCTCTGTGGACCTGACAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS CAA 90 bp ATCCTCTGGGAGCTGAGGTCGTGCAGCAGGGCCTCGATGGCCGGGTaGTGTCTGGAGTACAGCTCGTACCGGTTGATACCAATGTGGAAC +
Preference number: 6 (lower is better)
Translates to: ILWELRSCSRASMAG*CLEYSSYRLIPMWN
Trigger: GTTCCACATTGGTATCAACCGGTACGAGCTGTACTCCAGACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313766.6
ENST00000471328.1
ENST00000477004.1
ENST00000630666.1
ENST00000632495.1
ENST00000633408.1
ENST00000634108.1
ENST00000672066.1
ENST00000672298.1
ENST00000673544.1
CDS TCA 72 bp CCACGCAGCGAGATCCCACTGGACAGATGGGGAAAATaGGCTGGAGAGAAGCTCATACGGACAGCGGCACTG +
Preference number: 6 (lower is better)
Translates to: PRSEIPLDRWGK*AGEKLIRTAAL
Trigger: CAGTGCCGCTGTCCGTATGAGCTTCTCTCCAGCTCATTTTCCCCATCTGTCCAGTGGGATCTCGCTGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471328.1
ENST00000634108.1
ENST00000672298.1
CDS GCA 72 bp CACTGCTGTAGCGGCACCAGGATGGAGAGCTCGTCGTaGGAATACTTCCCAAACCCTCTTCCATTGTCTAAG +
Preference number: 6 (lower is better)
Translates to: HCCSGTRMESSS*EYFPNPLPLSK
Trigger: CTTAGACAATGGAAGAGGGTTTGGGAAGTATTCGCACGACGAGCTCTCCATCCTGGTGCCGCTACAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1
CDS CAA 90 bp CCTTCCCTGGGTGTGCAGGGGCGAGGACAGGCTCACCCTCTTCCATaGTCTAAGTGGATGATGAACGTTTCATTCCCAAACTTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: PSLGVQGRGQAHPLP*SKWMMNVSFPNFSK
Trigger: TTTTGAGAAGTTTGGGAATGAAACGTTCATCATCCACTTAGACAATGGAAGAGGGTGAGCCTGTCCTCGCCCCTGCACACCCAGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CAA 72 bp CTGCTCCCTCGTTTGTTTCATGGGTTTGAACAGCGCTaGCCCGTAATTCTGGAAGGTCATGATGAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: LLPRLFHGFEQR*PVILEGHDELQ
Trigger: CTGAAGCTCATCATGACCTTCCAGAATTACGGGCAAGCGCTGTTCAAACCCATGAAACAAACGAGGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313766.6
ENST00000672066.1
CDS CCA 72 bp GGGCGAGGACAGGCTCACCCTCTTCCATTGTCTAAGTaGATGATGAACGTTTCATTCCCAAACTTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: GRGQAHPLPLSK*MMNVSFPNFSK
Trigger: TTTTGAGAAGTTTGGGAATGAAACGTTCATCATCCACTTAGACAATGGAAGAGGGTGAGCCTGTCCTCGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512382.1
ENST00000673583.1
CDS CCA 72 bp TGCGAATACTTCCCAAACCCTCTTCCATTGTCTAAGTaGATGATGAACGTTTCATTCCCAAACTTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: CEYFPNPLPLSK*MMNVSFPNFSK
Trigger: TTTTGAGAAGTTTGGGAATGAAACGTTCATCATCCACTTAGACAATGGAAGAGGGTTTGGGAAGTATTCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313766.6
ENST00000515795.1
ENST00000672066.1
ENST00000672379.1