RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM20B (Homo sapiens)

Ensembl gene IDs: ENSG00000116199

Ensembl transcript IDs: ENST00000263733.5

Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACATCTCTTCCTATTGTCTCCTCCCAGCTGGCTCCTGGAAGCTTGTaGGTGAGCACTAACCAAGGTATTCTCATACTGAGCTGTGAATTT +
Preference number: 1 (lower is better)
Translates to: TSLPIVSSQLAPGSL*VSTNQGILILSCEF
Trigger: AAATTCACAGCTCAGTATGAGAATACCTTGGTTAGTGCTCACCCACAAGCTTCCAGGAGCCAGCTGGGAGGAGACAATAGGAAGAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR TCA 90 bp TGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAACAGCTCTaGGAGGAAATCCTTGGCAGATCAAAAGAGAGGGTAGTGGCTCCC +
Preference number: 1 (lower is better)
Translates to: CLVSYQVQSLSVQQL*EEILGRSKERVVAP
Trigger: GGGAGCCACTACCCTCTCTTTTGATCTGCCAAGGATTTCCTCTCAGAGCTGTTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR CCA 90 bp CCAAGTACAATCTCTGTCTGTGCAACAGCTCTGAGAGGAAATCCTTaGCAGATCAAAAGAGAGGGTAGTGGCTCCCACACTTTCCATTTA +
Preference number: 1 (lower is better)
Translates to: PSTISVCATALRGNP*QIKREGSGSHTFHL
Trigger: TAAATGGAAAGTGTGGGAGCCACTACCCTCTCTTTTGATCTGCCAAGGATTTCCTCTCAGAGCTGTTGCACAGACAGAGATTGTACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR TCA 90 bp ACCATCATTGAGGTGTGGTCATTTACTGGTCAAAGAATACACGGGTaGTCGAGAAGAAAGGCTGAAGAAATATGGCGGATGGGAAGGGAA +
Preference number: 1 (lower is better)
Translates to: TIIEVWSFTGQRIHG*SRRKAEEIWRMGRE
Trigger: TTCCCTTCCCATCCGCCATATTTCTTCAGCCTTTCTTCTCGATCACCCGTGTATTCTTTGACCAGTAAATGACCACACCTCAATGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR GCA 90 bp CATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTaGAACAGCTCTGAGAGGAAATCCTTGGCAGATCAAAAGAGAGGG +
Preference number: 1 (lower is better)
Translates to: HICLVWYLTKYNLCL*NSSERKSLADQKRG
Trigger: CCCTCTCTTTTGATCTGCCAAGGATTTCCTCTCAGAGCTGTTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR TCA 90 bp GCATTAAATGTATTCAACCACACTGTTTATATATTCGCCTCTACTTaGCAGAAATGCAAAGCTGGAACAGCACCTCAACAAGATGCAGGA +
Preference number: 1 (lower is better)
Translates to: ALNVFNHTVYIFAST*QKCKAGTAPQQDAG
Trigger: TCCTGCATCTTGTTGAGGTGCTGTTCCAGCTTTGCATTTCTGTCAAGTAGAGGCGAATATATAAACAGTGTGGTTGAATACATTTAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGGAGTCCATAGATGAGTaGGCACATCAGGCCTGTCTT +
Preference number: 2 (lower is better)
Translates to: PDVPGSLVCLACAGTLELESIDE*AHQACL
Trigger: AAGACAGGCCTGATGTGCCCACTCATCTATGGACTC...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR TCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGCAAAGAATACACGGGTaGTCGAGAAGAAAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: PDVPGSLVCLACAGTLELQRIHG*SRRKAE
Trigger: TTCAGCCTTTCTTCTCGATCACCCGTGTATTCTTTG...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR GCA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCCATATTAACCCTGAGTaGAAACAGGGGGCAATGCCT +
Preference number: 2 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLAHINPE*KQGAMP
Trigger: AGGCATTGCCCCCTGTTTGCACTCAGGGTTAATATG...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR GCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGGCCCCTGTGTTTTACTaGAACTACTTACATGTTGAG +
Preference number: 2 (lower is better)
Translates to: PDVPGSLVCLACAGTLELAPVFY*NYLHVE
Trigger: CTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGC...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCCATGTTTTAACAAGTTaGAGGAGGGCAGGAAATGGC +
Preference number: 2 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLAHVLTS*RRAGNG
Trigger: GCCATTTCCTGCCCTCCTCCAACTTGTTAAAACATG...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR CAA 90 bp ATGACATCTCTTCCTATTGTCTCCTCCCAGCTGGCTCCTGGAAGCTaGTGGGTGAGCACTAACCAAGGTATTCTCATACTGAGCTGTGAA +
Preference number: 2 (lower is better)
Translates to: MTSLPIVSSQLAPGS*WVSTNQGILILSCE
Trigger: TTCACAGCTCAGTATGAGAATACCTTGGTTAGTGCTCACCCACAAGCTTCCAGGAGCCAGCTGGGAGGAGACAATAGGAAGAGATGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR TCA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCAAGGTATTCTCATACTaGGCTGTGAATTTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLAKVFSY*AVNFPG
Trigger: TCCAGGGAAATTCACAGCTCAGTATGAGAATACCTT...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCCAGAGTGTGCTATTTTaGCTTGATGGAATGCAAGGT +
Preference number: 2 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLAQSVLF*LDGMQG
Trigger: ACCTTGCATTCCATCAAGCCAAAATAGCACACTCTG...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGTTATTCATTTCAGTGTaGCATACTAAAGGCGTCATG +
Preference number: 2 (lower is better)
Translates to: PDVPGSLVCLACAGTLELLFISV*HTKGVM
Trigger: CATGACGCCTTTAGTATGCCACACTGAAATGAATAA...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAAGCCTCCCGAGTAGCTaGGACTACAGGCGCATGCCA +
Preference number: 2 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQSLPSS*DYRRMP
Trigger: TGGCATGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR CAA 90 bp AGCTCTGAGTCCATAGATGAGTGGGCACATCAGGCCTGTCTTCCTTaGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGATCACTT +
Preference number: 2 (lower is better)
Translates to: SSESIDEWAHQACLP*PLCFTATTYMLRSL
Trigger: AAGTGATCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTGATGTGCCCACTCATCTATGGACTCAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAATTAGCTGGGCACGATaGCGGGCGCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQISWAR*RAPVIP
Trigger: TGGGATTACAGGCGCCCGCCATCGTGCCCAGCTAAT...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGCATAATACAACATCATaGGTTCAGAACTCCAAACAA +
Preference number: 2 (lower is better)
Translates to: PDVPGSLVCLACAGTLELHNTTS*VQNSKQ
Trigger: TTGTTTGGAGTTCTGAACCCATGATGTTGTATTATG...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAATTGTCTCCTCCCAGCTaGCTCCTGGAAGCTTGTGGG +
Preference number: 2 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQLSPPS*LLEACG
Trigger: CCCACAAGCTTCCAGGAGCCAGCTGGGAGGAGACAA...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCAACAATACTACCCAATaGCTTAAAAGCCCAAACATT +
Preference number: 2 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLANNTTQ*LKSPNI
Trigger: AATGTTTGGGCTTTTAAGCCATTGGGTAGTATTGTT...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR TCA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTGAAGAGAAACGAGGATaGCAGAGACCACAGGCAACC +
Preference number: 2 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTEEKRG*QRPQAT
Trigger: GGTTGCCTGTGGTCTCTGTCATCCTCGTTTCTCTTC...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR GCA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTTCCTCTAACAGAGTGTaGTATTTTGGCTTGATGGAA +
Preference number: 2 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSSSNRV*YFGLME
Trigger: TTCCATCAAGCCAAAATAGCACACTCTGTTAGAGGA...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR TCA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTTGTGCTATTTTGGCTTaGTGGAATGCAAGGTTTTAT +
Preference number: 2 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSCAILA*WNARFY
Trigger: ATAAAACCTTGCATTCCATCAAGCCAAAATAGCACA...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR TCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAGTTCAGTCATCTCCCTaGTTCTGGTTCTACCATTGG +
Preference number: 2 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQVQSSP*FWFYHW
Trigger: CCAATGGTAGAACCAGAATCAGGGAGATGACTGAAC...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR GCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAACCCCCAAACCCACAATaGAGCCTTACACTAAAGAAC +
Preference number: 2 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQPPNPQ*SLTLKN
Trigger: GTTCTTTAGTGTAAGGCTGCATTGTGGGTTTGGGGG...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR CAA 90 bp GGCATTAAATGTATTCAACCACACTGTTTATATATTCGCCTCTACTaGACAGAAATGCAAAGCTGGAACAGCACCTCAACAAGATGCAGG +
Preference number: 2 (lower is better)
Translates to: GIKCIQPHCLYIRLY*TEMQSWNSTSTRCR
Trigger: CCTGCATCTTGTTGAGGTGCTGTTCCAGCTTTGCATTTCTGTCAAGTAGAGGCGAATATATAAACAGTGTGGTTGAATACATTTAATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGACTAGAGACAACTTTTTaGTTAATTGGGACACAACTA +
Preference number: 2 (lower is better)
Translates to: QACLPLPLCFTATTYMLRLETTF*LIGTQL
Trigger: TAGTTGTGTCCCAATTAACCAAAAAGTTGTCTCTAG...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR TCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAACAACTACTTACATGTTaGGATCACTTTGCCAGAACA +
Preference number: 2 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQQLLTC*DHFART
Trigger: TGTTCTGGCAAAGTGATCTCAACATGTAAGTAGTTG...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR GCA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTTTTGGCTTGATGGAATaGAAGGTTTTATTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTFGLME*KVLFAA
Trigger: GGCAGCAAATAAAACCTTGCATTCCATCAAGCCAAA...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR GCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAGTTTTTGAGAGTGGTTaGCTAAAACTAGTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQVFESG*LKLVSN
Trigger: ATTGGAAACTAGTTTTAGGCAACCACTCTCAAAAAC...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAAAAGATCGATTTCTTTaGAAGATAATGCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQKDRFL*KIMLAS
Trigger: TGAAGCCAGCATTATCTTCCAAAGAAATCGATCTTT...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR CCA 72 bp AGGAGCAAAGCACACAGCTCTGAGTCCATAGATGAGTaGGCACATCAGGCCTGTCTTCCTTTGCCCCTGTGT +
Preference number: 3 (lower is better)
Translates to: RSKAHSSESIDE*AHQACLPLPLC
Trigger: ACACAGGGGCAAAGGAAGACAGGCCTGATGTGCCCACTCATCTATGGACTCAGAGCTGTGTGCTTTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCAAGGTTGCCGATCTCTaGGGAACAGCAGCTTCAGTG +
Preference number: 3 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLAKVADL*GTAASV
Trigger: CACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTT...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGAAAGGGACAAAAAGGTaGCCGATCTCTTGGGAACAG +
Preference number: 3 (lower is better)
Translates to: PDVPGSLVCLACAGTLELKGTKR*PISWEQ
Trigger: CTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTT...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR GCA 72 bp GACTACAGGCGCATGCCACCGTGCCCTGTTAATTTTTaGATTTTTAGTAGAGACGGTCTCACCATGCTAGCC +
Preference number: 3 (lower is better)
Translates to: DYRRMPPCPVNF*IFSRDGLTMLA
Trigger: GGCTAGCATGGTGAGACCGTCTCTACTAAAAATGCAAAAATTAACAGGGCACGGTGGCATGCGCCTGTAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCAATGCAAGGTTTTATTaGCTGCCACTCTGTAGGACA +
Preference number: 3 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLANARFY*LPLCRT
Trigger: TGTCCTACAGAGTGGCAGCAAATAAAACCTTGCATT...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGAAATCAATGCCTCCTTaGGTTAACACGAATTCTGTG +
Preference number: 3 (lower is better)
Translates to: PDVPGSLVCLACAGTLELKSMPP*VNTNSV
Trigger: CACAGAATTCGTGTTAACCAAAGGAGGCATTGATTT...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGGCTGTAAGTTTATGGTaGGTTTTCTCCAAGATTTGC +
Preference number: 3 (lower is better)
Translates to: PDVPGSLVCLACAGTLELAVSLW*VFSKIC
Trigger: GCAAATCTTGGAGAAAACCAACCATAAACTTACAGC...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGGATGACATTGAAAAATaGCCACGTATAGGACTCATC +
Preference number: 3 (lower is better)
Translates to: PDVPGSLVCLACAGTLELDDIEK*PRIGLI
Trigger: GATGAGTCCTATACGTGGCAATTTTTCAATGTCATC...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTAGAAGGCTTAAAATCTaGGCCGGCCACGGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTRRLKI*AGHGGS
Trigger: TGAGCCACCGTGGCCGGCCAAGATTTTAAGCCTTCT...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAATACCTAGCCCCTACCTaGTCACCACCCAGACTTGAG +
Preference number: 3 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQYLAPT*SPPRLE
Trigger: CTCAAGTCTGGGTGGTGACAAGGTAGGGGCTAGGTA...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR TCA 72 bp GAGGTGTGGTCATTTACTGGTCAAAGAATACACGGGTaGTCGAGAAGAAAGGCTGAAGAAATATGGCGGATG +
Preference number: 3 (lower is better)
Translates to: EVWSFTGQRIHG*SRRKAEEIWRM
Trigger: CATCCGCCATATTTCTTCAGCCTTTCTTCTCGATCACCCGTGTATTCTTTGACCAGTAAATGACCACACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTAAATGTCACACCTGTTaGTCCTTTGGCATGGGAATT +
Preference number: 3 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSKCHTC*SFGMGI
Trigger: AATTCCCATGCCAAAGGACAAACAGGTGTGACATTT...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAACAGGCCTGTCTTCCTTaGCCCCTGTGTTTTACTGCA +
Preference number: 3 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQQACLP*PLCFTA
Trigger: TGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR TCA 72 bp AAGGGAACCTGTTTTTCAGTAGTTCAGTCATCTCCCTaGTTCTGGTTCTACCATTGGGTCTCTCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: KGTCFSVVQSSP*FWFYHWVSLSS
Trigger: AGAAGAGAGAGAGACCCAATGGTAGAACCAGAATCAGGGAGATGACTGAACTACTGAAAAACAGGTTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR TCA 72 bp TCTTACCAAGTACAATCTCTGTCTGTGCAACAGCTCTaGGAGGAAATCCTTGGCAGATCAAAAGAGAGGGTA +
Preference number: 3 (lower is better)
Translates to: SYQVQSLSVQQL*EEILGRSKERV
Trigger: TACCCTCTCTTTTGATCTGCCAAGGATTTCCTCTCAGAGCTGTTGCACAGACAGAGATTGTACTTGGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGAGTGTGCTATTTTGGCTaGATGGAATGCAAGGTTTTA +
Preference number: 3 (lower is better)
Translates to: QACLPLPLCFTATTYMLRVCYFG*MECKVL
Trigger: TAAAACCTTGCATTCCATCAAGCCAAAATAGCACAC...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTGTTTGCTTTGTTAATTaGGGAAGGACTGCTTTTGGC +
Preference number: 3 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTVCFVN*GRTAFG
Trigger: GCCAAAAGCAGTCCTTCCCAAATTAACAAAGCAAAC...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR-3UTR CAA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAGCTGTTTTACCATCATaGAGGTGTGGTCATTTACTG +
Preference number: 3 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQAVLPS*RCGHLL
Trigger: CAGTAAATGACCACACCTCAATGATGGTAAAACAGC...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR TCA 72 bp GTATTCAACCACACTGTTTATATATTCGCCTCTACTTaGCAGAAATGCAAAGCTGGAACAGCACCTCAACAA +
Preference number: 3 (lower is better)
Translates to: VFNHTVYIFAST*QKCKAGTAPQQ
Trigger: TTGTTGAGGTGCTGTTCCAGCTTTGCATTTCTGTCAAGTAGAGGCGAATATATAAACAGTGTGGTTGAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGGGAGACTGCAAGGTATaGTCCAGCTTGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PDVPGSLVCLACAGTLELGDCKV*SSLGAS
Trigger: GCTGGCACCCAAGCTGGACCATACCTTGCAGTCTCC...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGACCAAGGGGGCTCGGTaGAAACCCAGAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PDVPGSLVCLACAGTLELTKGAR*KPRILS
Trigger: GGACAGGATTCTGGGTTTCCACCGAGCCCCCTTGGT...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGAAGGTGCTCAACAGCTaGTCTGTGGCGACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PDVPGSLVCLACAGTLELKVLNS*SVATGL
Trigger: CAAACCTGTCGCCACAGAGCAGCTGTTGAGCACCTT...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGGGCAGGTGGATCACCTaGGGTCAGGAGTCCAAGATC +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQGRWIT*GQESKI
Trigger: GATCTTGGACTCCTGACCCCAGGTGATCCACCTGCC...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGCTGGAAGCTTGTGGGTaGGCACTAACCAAGGTATTC +
Preference number: 4 (lower is better)
Translates to: PDVPGSLVCLACAGTLELLEACG*ALTKVF
Trigger: GAATACCTTGGTTAGTGCTCACCCACAAGCTTCCAG...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTCCTAGGCTCGCTCCATaGCCGCCCGCGCGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: PSLQFYLKHVSPLTECAIPRLAP*PPARCG
Trigger: ACCGCACCGCGCGGGCGGCCATGGAGCGAGCCTAGG...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGTCTGGTCCTCCCGGTTaGCAGCTGATGTATCTAAGT +
Preference number: 4 (lower is better)
Translates to: PDVPGSLVCLACAGTLELSGPPG*QLMYLS
Trigger: ACTTAGATACATCAGCTGCCAACCGGGAGGACCAGA...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGGAAGAGAAACGAGGATaGCAGAGACCACAGGCAACC +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQEEKRG*QRPQAT
Trigger: GGTTGCCTGTGGTCTCTGTCATCCTCGTTTCTCTTC...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGGCTCCTGGAAGCTTGTaGGTGAGCACTAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQAPGSL*VSTNQG
Trigger: ACCTTGGTTAGTGCTCACCCACAAGCTTCCAGGAGC...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGAGTAAGTCCTGCCCCATaGGTGACGGTGCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QACLPLPLCFTATTYMLRVSPAP*VTVLLQ
Trigger: CTGCAGAAGCACCGTCACCCATGGGGCAGGACTTAC...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTTTGTCTCCTCCCAGCTaGCTCCTGGAAGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSLSPPS*LLEACG
Trigger: CCCACAAGCTTCCAGGAGCCAGCTGGGAGGAGACAA...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR CAA 72 bp CTTCCTATTGTCTCCTCCCAGCTGGCTCCTGGAAGCTaGTGGGTGAGCACTAACCAAGGTATTCTCATACTG +
Preference number: 4 (lower is better)
Translates to: LPIVSSQLAPGS*WVSTNQGILIL
Trigger: CAGTATGAGAATACCTTGGTTAGTGCTCACCCACAAGCTTCCAGGAGCCAGCTGGGAGGAGACAATAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTGTCCTGCCCCATGGGTaGCGGTGCTTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PSLQFYLKHVSPLTECAIVLPHG*RCFCRG
Trigger: GCCTCTGCAGAAGCACCGTCACCCATGGGGCAGGAC...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGCGAGAATTACAAGTGTaGGAGAGGCATCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQRELQV*ERHPVF
Trigger: GAAGACAGGATGCCTCTCTCACACTTGTAATTCTCG...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTTGCCCAACCCTAGAATaGGCAATTGCCGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSCPTLE*AIAEEV
Trigger: CACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCA...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGCATATTAACCCTGAGTaGAAACAGGGGGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQHINPE*KQGAMP
Trigger: AGGCATTGCCCCCTGTTTGCACTCAGGGTTAATATG...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGTTTACTCATGTTTCCTaGAGCTCAAACTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: PDVPGSLVCLACAGTLELFTHVS*SSNSQD
Trigger: ATCCTGTGAGTTTGAGCTTCAGGAAACATGAGTAAA...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAATGGTCCAGCTTGGGTaGCAGCTCCACCCGCAAGCC +
Preference number: 4 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQMVQLG*QLHPQA
Trigger: GGCTTGCGGGTGGAGCTGGCACCCAAGCTGGACCAT...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGTTCTGGTTCTACCATTaGGTCTCTCTCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQFWFYH*VSLSSS
Trigger: GGAAGAAGAGAGAGAGACCCAATGGTAGAACCAGAA...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCACAGAAATGCAAAGCTaGAACAGCACCTCAACAAGA +
Preference number: 4 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLATEMQS*NSTSTR
Trigger: TCTTGTTGAGGTGCTGTTCCAGCTTTGCATTTCTGT...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTGGTCCATTTCTTCACTaGTGCACCTTCCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSGPFLH*CTFHSS
Trigger: GGAACTGTGGAAGGTGCATCAGTGAAGAAATGGACC...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGTGTGCTATTTTGGCTTaGTGGAATGCAAGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: PDVPGSLVCLACAGTLELCAILA*WNARFY
Trigger: ATAAAACCTTGCATTCCATCAAGCCAAAATAGCACA...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGCTGTTTTACCATCATTaGGGTGTGGTCATTTACTGG +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQLFYHH*GVVIYW
Trigger: CCAGTAAATGACCACACCTCAATGATGGTAAAACAG...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGATCTGTGCAACAGCTCTaGGAGGAAATCCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QACLPLPLCFTATTYMLRSVQQL*EEILGR
Trigger: TCTGCCAAGGATTTCCTCTCAGAGCTGTTGCACAGA...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAAGGTATGGTCCAGCTTaGGTGCCAGCTCCACCCGCA +
Preference number: 4 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQRYGPA*VPAPPA
Trigger: TGCGGGTGGAGCTGGCACCCAAGCTGGACCATACCT...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTCATCATACTCCCACCTaGCCAATTTGCCTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSHHTPT*PICLLG
Trigger: ACCGAGAAGGCAAATTGGCCAGGTGGGAGTATGATG...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTCTCCCAGCTGGCTCCTaGAAGCTTGTGGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PSLQFYLKHVSPLTECAILPAGS*KLVGEH
Trigger: GTGCTCACCCACAAGCTTCCAGGAGCCAGCTGGGAG...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGCAACTACTTACATGTTaGGATCACTTTGCCAGAACA +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQQLLTC*DHFART
Trigger: TGTTCTGGCAAAGTGATCTCAACATGTAAGTAGTTG...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTCTTCTCGGTAAGTCCTaGCCCATGGGTGACGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSLQFYLKHVSPLTECAILLGKS*PMGDGA
Trigger: AGCACCGTCACCCATGGGGCAGGACTTACCGAGAAG...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGACCCCCAAACCCACAATaGAGCCTTACACTAAAGAAC +
Preference number: 4 (lower is better)
Translates to: QACLPLPLCFTATTYMLRPPNPQ*SLTLKN
Trigger: GTTCTTTAGTGTAAGGCTGCATTGTGGGTTTGGGGG...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGGCAAACAGGGGGCAATaGCTTATTAATACATTCTTG +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQANRGQ*LINTFL
Trigger: CAAGAATGTATTAATAAGGCATTGCCCCCTGTTTGC...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGAACAATACTACCCAATaGCTTAAAAGCCCAAACATT +
Preference number: 4 (lower is better)
Translates to: PDVPGSLVCLACAGTLELNNTTQ*LKSPNI
Trigger: AATGTTTGGGCTTTTAAGCCATTGGGTAGTATTGTT...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR CAA 72 bp TCCATAGATGAGTGGGCACATCAGGCCTGTCTTCCTTaGCCCCTGTGTTTTACTGCAACTACTTACATGTTG +
Preference number: 4 (lower is better)
Translates to: SIDEWAHQACLP*PLCFTATTYML
Trigger: CAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTGATGTGCCCACTCATCTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGATCCACTCTCAGAGACTaGGAACCTTTCACTAAGGTT +
Preference number: 4 (lower is better)
Translates to: QACLPLPLCFTATTYMLRSTLRD*EPFTKV
Trigger: AACCTTAGTGAAAGGTTCTCAGTCTCTGAGAGTGGA...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAACCTTCCCCTGTAGGATaGGTTTCCCAAGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQPSPVG*VSQGQM
Trigger: CATCTGGCCTTGGGAAACTCATCCTACAGGGGAAGG...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCGTTTTTGAGAGTGGTTaGCTAAAACTAGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLAVFESG*LKLVSN
Trigger: ATTGGAAACTAGTTTTAGGCAACCACTCTCAAAAAC...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCCATGATTATACACATTaGTCCATTTCTTCACTGATG +
Preference number: 4 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLAHDYTH*SISSLM
Trigger: CATCAGTGAAGAAATGGACCAATGTGTATAATCATG...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGAATCAATGCCTCCTTTaGTTAACACGAATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQNQCLL*LTRILC
Trigger: ACACAGAATTCGTGTTAACCAAAGGAGGCATTGATT...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGTTATTCATTTCAGTGTaGCATACTAAAGGCGTCATG +
Preference number: 4 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQLFISV*HTKGVM
Trigger: CATGACGCCTTTAGTATGCCACACTGAAATGAATAA...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGACTGAGAGGAAATCCTTaGCAGATCAAAAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: QACLPLPLCFTATTYMLRLRGNP*QIKREG
Trigger: ACCCTCTCTTTTGATCTGCCAAGGATTTCCTCTCAG...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTATCTCCCAGGGAGACTaGAAGGTATGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PSLQFYLKHVSPLTECAIISQGD*KVWSSL
Trigger: CAAGCTGGACCATACCTTGCAGTCTCCCTGGGAGAT...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGAGCCCCTGTGTTTTACTaGAACTACTTACATGTTGAG +
Preference number: 4 (lower is better)
Translates to: QACLPLPLCFTATTYMLRAPVFY*NYLHVE
Trigger: CTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGC...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTCAGAGTGTGCTATTTTaGCTTGATGGAATGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSQSVLF*LDGMQG
Trigger: ACCTTGCATTCCATCAAGCCAAAATAGCACACTCTG...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTCTTTTCCTTCTCCCCTaGCCCACTCTTGCTCATGTA +
Preference number: 4 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTLFLLP*PTLAHV
Trigger: TACATGAGCAAGAGTGGGTCAGGGGAGAAGGAAAAG...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTAGGTGGACACCCGAATaGTGCAACACTGATAGAGAG +
Preference number: 4 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTRWTPE*CNTDRE
Trigger: CTCTCTATCAGTGTTGCATCATTCGGGTGTCCACCT...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTCCCCTGACCCACTCTTaGTCATGTATTAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTPLTHS*SCIKES
Trigger: GCTCTCCTTAATACATGAGCAAGAGTGGGTCAGGGG...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGATTTGGCTTGATGGAATaGAAGGTTTTATTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QACLPLPLCFTATTYMLRFGLME*KVLFAA
Trigger: GGCAGCAAATAAAACCTTGCATTCCATCAAGCCAAA...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGATCCTCTAACAGAGTGTaGTATTTTGGCTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: QACLPLPLCFTATTYMLRSSNRV*YFGLME
Trigger: TTCCATCAAGCCAAAATAGCACACTCTGTTAGAGGA...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAAGCACCTCAACAAGATaGAGGAGCAAAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQSTSTR*RSKAHS
Trigger: GCTGTGTGCTTTGCTCCTGCATCTTGTTGAGGTGCT...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTGAGTCCATAGATGAGTaGGCACATCAGGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTESIDE*AHQACL
Trigger: AAGACAGGCCTGATGTGCCCACTCATCTATGGACTC...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTGTTCAGTCATCTCCCTaGTTCTGGTTCTACCATTGG +
Preference number: 4 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTVQSSP*FWFYHW
Trigger: CCAATGGTAGAACCAGAATCAGGGAGATGACTGAAC...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTATCGAGAAGAAAGGCTaGAGAAATATGGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: PSLQFYLKHVSPLTECAIIEKKG*RNMADG
Trigger: CCCATCCGCCATATTTCTTCAGCCTTTCTTCTCGAT...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAACAAAGAATACACGGGTaGTCGAGAAGAAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQQRIHG*SRRKAE
Trigger: TTCAGCCTTTCTTCTCGATCACCCGTGTATTCTTTG...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGATGCCCTGTTAATTTTTaGATTTTTAGTAGAGACGGT +
Preference number: 4 (lower is better)
Translates to: QACLPLPLCFTATTYMLRCPVNF*IFSRDG
Trigger: ACCGTCTCTACTAAAAATGCAAAAATTAACAGGGCA...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGAAAAGATCGATTTCTTTaGAAGATAATGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QACLPLPLCFTATTYMLRKDRFL*KIMLAS
Trigger: TGAAGCCAGCATTATCTTCCAAAGAAATCGATCTTT...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAATATTCGCCTCTACTTaGCAGAAATGCAAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQIFAST*QKCKAG
Trigger: TCCAGCTTTGCATTTCTGTCAAGTAGAGGCGAATAT...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR TCA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAAAGGTATTCTCATACTaGGCTGTGAATTTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQKVFSY*AVNFPG
Trigger: TCCAGGGAAATTCACAGCTCAGTATGAGAATACCTT...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR CAA 72 bp TGTATTCAACCACACTGTTTATATATTCGCCTCTACTaGACAGAAATGCAAAGCTGGAACAGCACCTCAACA +
Preference number: 4 (lower is better)
Translates to: CIQPHCLYIRLY*TEMQSWNSTST
Trigger: TGTTGAGGTGCTGTTCCAGCTTTGCATTTCTGTCAAGTAGAGGCGAATATATAAACAGTGTGGTTGAATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTACCATCATTGAGGTGTaGTCATTTACTGGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTTIIEV*SFTGQR
Trigger: TCTTTGACCAGTAAATGACCACACCTCAATGATGGT...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR GCA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTCTTAGCAGAATCTTCTaGCTTCAATGTTATGAAGTT +
Preference number: 4 (lower is better)
Translates to: PSLQFYLKHVSPLTECAILSRIF*LQCYEV
Trigger: AACTTCATAACATTGAAGGCAGAAGATTCTGCTAAG...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTCTAGAGACAACTTTTTaGTTAATTGGGACACAACTA +
Preference number: 4 (lower is better)
Translates to: PSLQFYLKHVSPLTECAILETTF*LIGTQL
Trigger: TAGTTGTGTCCCAATTAACCAAAAAGTTGTCTCTAG...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CCA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTCATAATACAACATCATaGGTTCAGAACTCCAAACAA +
Preference number: 4 (lower is better)
Translates to: PSLQFYLKHVSPLTECAIHNTTS*VQNSKQ
Trigger: TTGTTTGGAGTTCTGAACCCATGATGTTGTATTATG...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
3UTR CAA 72 bp GAACACATTAGAAATTTAGATCCATATCTGTCTTGTTaGGTATCTTACCAAGTACAATCTCTGTCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: EHIRNLDPYLSC*VSYQVQSLSVQ
Trigger: TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATCTAAATTTCTAATGTGTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCCTCTGGTCCTCCCGGTaGGCAGCTGATGTATCTAAG +
Preference number: 5 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLALWSSR*AADVSK
Trigger: CTTAGATACATCAGCTGCCAACCGGGAGGACCAGAG...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCAGGCAAGAGAATCGCTaGAACCTGGGAGACGGAGGT +
Preference number: 5 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLARQENR*NLGDGG
Trigger: ACCTCCGTCTCCCAGGTTCAAGCGATTCTCTTGCCT...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp TGTAGGATGAGTTTCCCAAGGCCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTACCTAGCCCCTACCTaGTCACCACCCAGACTTGAG +
Preference number: 5 (lower is better)
Translates to: CRMSFPRPDVPGSLVCLAYLAPT*SPPRLE
Trigger: CTCAAGTCTGGGTGGTGACAAGGTAGGGGCTAGGTA...GGCCAGACATACTAGTGAGCCAGGCACATCTGGCCTTGGGAAACTCATCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGCAGGCCTGTCTTCCTTaGCCCCTGTGTTTTACTGCA +
Preference number: 5 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQQACLP*PLCFTA
Trigger: TGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CCAGATGTGCCTGGCTCACTAGTATGTCTGGCCTGTGCTGGCACACTAGAGTTGGTTTGCTTTGTTAATTaGGGAAGGACTGCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: PDVPGSLVCLACAGTLELVCFVN*GRTAFG
Trigger: GCCAAAAGCAGTCCTTCCCAAATTAACAAAGCAAAC...CAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCCAGGCACATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTAAGGTATGGTCCAGCTaGGGTGCCAGCTCCACCCGC +
Preference number: 5 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTKVWSS*GASSTR
Trigger: GCGGGTGGAGCTGGCACCCAAGCTGGACCATACCTT...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTAAGGTTGCCGATCTCTaGGGAACAGCAGCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSKVADL*GTAASV
Trigger: CACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTT...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTTCTGTGGCGACAGGTTaGATCTCTGTCCGAAGATTA +
Preference number: 5 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSSVATG*ISVRRL
Trigger: TAATCTTCGGACAGAGATCAAACCTGTCGCCACAGA...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGGTGTGCTATTTTGGCTaGATGGAATGCAAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQVCYFG*MECKVL
Trigger: TAAAACCTTGCATTCCATCAAGCCAAAATAGCACAC...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGAAAAGGGACAAAAAGGTaGCCGATCTCTTGGGAACAG +
Preference number: 5 (lower is better)
Translates to: QACLPLPLCFTATTYMLRKGTKR*PISWEQ
Trigger: CTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTT...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAAGAAGGCTTAAAATCTaGGCCGGCCACGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQRRLKI*AGHGGS
Trigger: TGAGCCACCGTGGCCGGCCAAGATTTTAAGCCTTCT...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAACTGGCTCCTGGAAGCTaGTGGGTGAGCACTAACCAA +
Preference number: 5 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQLAPGS*WVSTNQ
Trigger: TTGGTTAGTGCTCACCCACAAGCTTCCAGGAGCCAG...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp ATGATGCCCAACCCTAGAATGAGCAATTGCCGAGGAGGTGAGAAGGCGATTCAGAGATCCATATCTGTCTaGTTTGGTATCTTACCAAGT +
Preference number: 5 (lower is better)
Translates to: MMPNPRMSNCRGGEKAIQRSISV*FGILPS
Trigger: ACTTGGTAAGATACCAAACAAGACAGATATGGATCT...CTGAATCGCCTTCTCACCTCCTCGGCAATTGCTCATTCTAGGGTTGGGCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGAAAATGTCACACCTGTTaGTCCTTTGGCATGGGAATT +
Preference number: 5 (lower is better)
Translates to: QACLPLPLCFTATTYMLRKCHTC*SFGMGI
Trigger: AATTCCCATGCCAAAGGACAAACAGGTGTGACATTT...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGAAATGCAAGGTTTTATTaGCTGCCACTCTGTAGGACA +
Preference number: 5 (lower is better)
Translates to: QACLPLPLCFTATTYMLRNARFY*LPLCRT
Trigger: TGTCCTACAGAGTGGCAGCAAATAAAACCTTGCATT...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGAAAACCCTGCAACGACTaGATTGTAACAGCCTTAGAT +
Preference number: 5 (lower is better)
Translates to: QACLPLPLCFTATTYMLRKPCND*IVTALD
Trigger: ATCTAAGGCTGTTACAATCAAGTCGTTGCAGGGTTT...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CTTATGAGAAAGGGACAAAAAGGTTGCCGATCTCTTGGGAACAGCAGCTTCAGTAAATCAATGCCTCCTTaGGTTAACACGAATTCTGTG +
Preference number: 5 (lower is better)
Translates to: LMRKGQKGCRSLGNSSFSKSMPP*VNTNSV
Trigger: CACAGAATTCGTGTTAACCAAAGGAGGCATTGATTT...ACTGAAGCTGCTGTTCCCAAGAGATCGGCAACCTTTTTGTCCCTTTCTCATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CAGGCCTGTCTTCCTTTGCCCCTGTGTTTTACTGCAACTACTTACATGTTGAGAAAAGGCGTCATGTATTaGAAAGACCACAAATCCATA +
Preference number: 5 (lower is better)
Translates to: QACLPLPLCFTATTYMLRKGVMY*KDHKSI
Trigger: TATGGATTTGTGGTCTTTCAAATACATGACGCCTTT...TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTGGGTTCCCAAAGCTTTaGGCATTATCAAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: PSLQFYLKHVSPLTECAIGFPKL*ALSRRM
Trigger: CATCCTTCTTGATAATGCCAAAAGCTTTGGGAACCC...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp CCTTCCCTCCAATTCTATCTTAAACATGTATCTCCTCTAACAGAGTGTGCTATTACATGTTTTAACAAGTaGGAGGAGGGCAGGAAATGG +
Preference number: 5 (lower is better)
Translates to: PSLQFYLKHVSPLTECAITCFNK*EEGRKW
Trigger: CCATTTCCTGCCCTCCTCCAACTTGTTAAAACATGT...AATAGCACACTCTGTTAGAGGAGATACATGTTTAAGATAGAATTGGAGGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTGCAACTACTTACATGTaGAGATCACTTTGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTATTYM*RSLCQN
Trigger: GTTCTGGCAAAGTGATCTCAACATGTAAGTAGTTGC...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTTATATTCGCCTCTACTaGACAGAAATGCAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTYIRLY*TEMQSW
Trigger: CCAGCTTTGCATTTCTGTCAAGTAGAGGCGAATATA...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTGCTGTTTTACCATCATaGAGGTGTGGTCATTTACTG +
Preference number: 5 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTAVLPS*RCGHLL
Trigger: CAGTAAATGACCACACCTCAATGATGGTAAAACAGC...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp AGAGGAGAAAGAAGCATAATACAACATCATGGGTTCAGAACTCCAAACAAGACTGAAGGCTTAAAATCTTaGTTTCCAATCTTCCATGGC +
Preference number: 5 (lower is better)
Translates to: RGERSIIQHHGFRTPNKTEGLKS*FPIFHG
Trigger: GCCATGGAAGATTGGAAACAAAGATTTTAAGCCTTC...AGTCTTGTTTGGAGTTCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAGATGACATTGAAAAATaGCCACGTATAGGACTCATC +
Preference number: 5 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQDDIEK*PRIGLI
Trigger: GATGAGTCCTATACGTGGCAATTTTTCAATGTCATC...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5
CDS-3UTR CAA 90 bp GATCCATATCTGTCTTGTTTGGTATCTTACCAAGTACAATCTCTGTCTGTGCAAGGTGCAAAGTCATGTTaGCTTTTTATACACCTTAAG +
Preference number: 5 (lower is better)
Translates to: DPYLSCLVSYQVQSLSVQGAKSC*LFIHLK
Trigger: CTTAAGGTGTATAAAAAGCAAACATGACTTTGCACC...TTGCACAGACAGAGATTGTACTTGGTAAGATACCAAACAAGACAGATATGGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263733.5