RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM20A (Homo sapiens)

Ensembl gene IDs: ENSG00000108950

Ensembl transcript IDs: ENST00000226094.9, ENST00000375556.8, ENST00000590074.5, ENST00000590873.5, ENST00000592554.2, ENST00000592847.1, ENST00000619787.4

Found 507 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGGCCAGAGTCTGGGGCCAACTGTTCCACTGGGCCGTCGACTATaGCACTCTGCTGTCCATGGGCCACTATGCACCCCTCCACTGTCC +
Preference number: 1 (lower is better)
Translates to: PGQSLGPTVPLGRRL*HSAVHGPLCTPPLS
Trigger: GGACAGTGGAGGGGTGCATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCCCCAGACTCTGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR TCA 90 bp GCTTCCTTCCTAGCTGACTTGACTCCCAGCAGTAACAGGTGGGAGTaGGGACGCAGGGTCGGCACTCGAGTCGACTGCTCTGGCTCCAGG +
Preference number: 1 (lower is better)
Translates to: ASFLADLTPSSNRWE*GRRVGTRVDCSGSR
Trigger: CCTGGAGCCAGAGCAGTCGACTCGAGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACTGCTGGGAGTCAAGTCAGCTAGGAAGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR CCA 90 bp ACCCAGGTGGAACTGGACCCAGCTGGCCTCGAGTCGGAGCTGCAGTaGGGGGTCCAGGGAGGTAAGGTTCATCTGCTCTCTGTACATCTT +
Preference number: 1 (lower is better)
Translates to: TQVELDPAGLESELQ*GVQGGKVHLLSVHL
Trigger: AAGATGTACAGAGAGCAGATGAACCTTACCTCCCTGGACCCCCCACTGCAGCTCCGACTCGAGGCCAGCTGGGTCCAGTTCCACCTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR GCA 90 bp GAGTCTGGGGCCAACTGTTCCACTGGGCCGTCGACTATGACACTCTaGTGTCCATGGGCCACTATGCACCCCTCCACTGTCCTTAGGATG +
Preference number: 1 (lower is better)
Translates to: ESGANCSTGPSTMTL*CPWATMHPSTVLRM
Trigger: CATCCTAAGGACAGTGGAGGGGTGCATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCCCCAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR CCA 90 bp GGACTCTGCCAGCCCTTAGCTTGTCAAGTTAGCCTGGCCAGAGTCTaGGGCCAACTGTTCCACTGGGCCGTCGACTATGACACTCTGCTG +
Preference number: 1 (lower is better)
Translates to: GLCQPLACQVSLARV*GQLFHWAVDYDTLL
Trigger: CAGCAGAGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCCCCAGACTCTGGCCAGGCTAACTTGACAAGCTAAGGGCTGGCAGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR TCA 90 bp GAGGTGGGGTTCAGTGAGGACAGGGCTGAGCTGGTCTTCCAGCAGTaGTTCTCGCATCACATCGCTGAGTCTGTAGTCAGCTTGGGCCAG +
Preference number: 1 (lower is better)
Translates to: EVGFSEDRAELVFQQ*FSHHIAESVVSLGQ
Trigger: CTGGCCCAAGCTGACTACAGACTCAGCGATGTGATGCGAGAATCACTGCTGGAAGACCAGCTCAGCCCTGTCCTCACTGAACCCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000590873.5
3UTR CCA 90 bp GCCAACTGTTCCACTGGGCCGTCGACTATGACACTCTGCTGTCCATaGGCCACTATGCACCCCTCCACTGTCCTTAGGATGGTTTGGAGC +
Preference number: 1 (lower is better)
Translates to: ANCSTGPSTMTLCCP*ATMHPSTVLRMVWS
Trigger: GCTCCAAACCATCCTAAGGACAGTGGAGGGGTGCATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR CCA 90 bp GCTTGTCAAGTTAGCCTGGCCAGAGTCTGGGGCCAACTGTTCCACTaGGCCGTCGACTATGACACTCTGCTGTCCATGGGCCACTATGCA +
Preference number: 1 (lower is better)
Translates to: ACQVSLARVWGQLFH*AVDYDTLLSMGHYA
Trigger: TGCATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCCCCAGACTCTGGCCAGGCTAACTTGACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR CCA 90 bp AACATGGCCTTCCCGAAATCCGAGAACCTCAGCACCAGCTTGAGGTaGACCCCACTGGGTTTCACAATCTGGGTGCAGTCACATGCCCCC +
Preference number: 1 (lower is better)
Translates to: NMAFPKSENLSTSLR*TPLGFTIWVQSHAP
Trigger: GGGGGCATGTGACTGCACCCAGATTGTGAAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAAGGCCATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR GCA 90 bp GAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTaGCAGCCCTTAGCTTGTCAAGTTAGCCTGGCCAGAGTCTGGGGC +
Preference number: 1 (lower is better)
Translates to: ESTALAPGVFSETGL*QPLACQVSLARVWG
Trigger: GCCCCAGACTCTGGCCAGGCTAACTTGACAAGCTAAGGGCTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR GCA 90 bp AACCCTCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCGTCTTaGACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCTG +
Preference number: 1 (lower is better)
Translates to: NPPAGVGCHRQHTPS*TCMDTWRRSTRCSL
Trigger: CAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CCA 90 bp TGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTaGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCA +
Preference number: 1 (lower is better)
Translates to: CTQEIVGGLDEASAF*EKRSKATHDRSGAP
Trigger: TGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR GCA 90 bp CTGGGATCAAGGCTGCCAAGCCTGACCTATACCCAGATTTCCCAGTaGACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTT +
Preference number: 1 (lower is better)
Translates to: LGSRLPSLTYTQISQ*TQEIVGGLDEASAF
Trigger: AAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTGATCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR CCA 90 bp CAGGTGTGGGTTGCCACAGACAGCATACTCCGTCTTGCACATGTATaGACACTTGGCGAAGAAGCACACGTTGCTCGCTGGAGAGACAAA +
Preference number: 1 (lower is better)
Translates to: QVWVATDSILRLAHV*TLGEEAHVARWRDK
Trigger: TTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR TCA 90 bp GACTTGTTACCATTAGTACTCTCCTGGGATCAAGGCTGCCAAGCCTaGCCTATACCCAGATTTCCCAGTGCACTCAGGAGATCGTCGGTG +
Preference number: 1 (lower is better)
Translates to: DLLPLVLSWDQGCQA*PIPRFPSALRRSSV
Trigger: CACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTGATCCCAGGAGAGTACTAATGGTAACAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR CCA 90 bp GGTTGCCACAGACAGCATACTCCGTCTTGCACATGTATGGACACTTaGCGAAGAAGCACACGTTGCTCGCTGGAGAGACAAAGAAAACAC +
Preference number: 1 (lower is better)
Translates to: GCHRQHTPSCTCMDT*RRSTRCSLERQRKH
Trigger: GTGTTTTCTTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR TCA 90 bp AGGCCATTGGAAAACCAGTCCTTCGTTATAGGAGGTGGCGGGTTTTaGGGTAGAGCTGTAGCCTGCTTTCCTGAGAGTCTTATTTGGAAG +
Preference number: 1 (lower is better)
Translates to: RPLENQSFVIGGGGF*GRAVACFPESLIWK
Trigger: CTTCCAAATAAGACTCTCAGGAAAGCAGGCTACAGCTCTACCTCAAAACCCGCCACCTCCTATAACGAAGGACTGGTTTTCCAATGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR TCA 90 bp CCAGATGGAAAGCTGCGATCTCAGCATTGTGTCTCTGAAAGTCAATaGAGTAGAAGAAGTCCACTGGTGTCTCCTCATCTCGCTGCTGTC +
Preference number: 1 (lower is better)
Translates to: PDGKLRSQHCVSESQ*SRRSPLVSPHLAAV
Trigger: GACAGCAGCGAGATGAGGAGACACCAGTGGACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAGATCGCAGCTTTCCATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR TCA 90 bp AAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTaGGAGGATTGGAAACCTGTGTGTTGCTTCTGTAGCGTTGGTGAG +
Preference number: 1 (lower is better)
Translates to: KVLPCTLEDGGCICV*EDWKPVCCFCSVGE
Trigger: CTCACCAACGCTACAGAAGCAACACACAGGTTTCCAATCCTCTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR TCA 90 bp AAGGCAGAGAGGGAACCCTCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCACCTCAGCACCAGCTTaGGGTGGACCCCACTGGGTT +
Preference number: 2 (lower is better)
Translates to: KAEREPSSRCGLPQTAYSTSAPA*GGPHWV
Trigger: AACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGT...GGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGTTCCCTCTCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CCA 90 bp AAGGCAGAGAGGGAACCCTCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCTATCCTCCCCACTGTTaGCGGCACCCGTCGGAAGTC +
Preference number: 2 (lower is better)
Translates to: KAEREPSSRCGLPQTAYSYPPHC*RHPSEV
Trigger: GACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATA...GGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGTTCCCTCTCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR TCA 90 bp GTAGAGCCCATGGCGGTTAATACCCAGGTGGAACTGGACCCAGCTGGCCTCGAGCTCGCATCACATCGCTaGGTCTGTAGTCAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: VEPMAVNTQVELDPAGLELASHR*VCSQLG
Trigger: CCCAAGCTGACTACAGACTCAGCGATGTGATGCGAG...CTCGAGGCCAGCTGGGTCCAGTTCCACCTGGGTATTAACCGCCATGGGCTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CCA 90 bp GGGAAAGTGCCTCATGTCTTGCAGAAGTTTGCTGACAACAGGGCTGGACCGGGACGGTTAATACCCAGGTaGAACTGGACCCAGCTGGCC +
Preference number: 2 (lower is better)
Translates to: GKVPHVLQKFADNRAGPGRLIPR*NWTQLA
Trigger: GGCCAGCTGGGTCCAGTTCCACCTGGGTATTAACCG...TCCCGGTCCAGCCCTGTTGTCAGCAAACTTCTGCAAGACATGAGGCACTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CCA 90 bp GAGGCGAGAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTACCCTCCAGCAGGTGTaGGTTGCCACAGACAGCATA +
Preference number: 2 (lower is better)
Translates to: EARGWRFHHGSVVRTLWRTLQQV*VATDSI
Trigger: TATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGT...ACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTCTCGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CAA 90 bp GAACCCTCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCGTCTaGCACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCT +
Preference number: 2 (lower is better)
Translates to: EPSSRCGLPQTAYSV*HMYGHLAKKHTLLA
Trigger: AGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR TCA 90 bp ACTATGCACCCCTCCACTGTCCTTAGGATGGTTTGGAGCCTTCGATCCAGGGCACTCGCATCACATCGCTaGGTCTGTAGTCAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: TMHPSTVLRMVWSLRSRALASHR*VCSQLG
Trigger: CCCAAGCTGACTACAGACTCAGCGATGTGATGCGAG...TGCCCTGGATCGAAGGCTCCAAACCATCCTAAGGACAGTGGAGGGGTGCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR-3UTR GCA 90 bp CTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAGGTCCATGGGCCACTATaGACCCCTCCACTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: LESTALAPGVFSETGLCQVHGPL*TPPLSL
Trigger: TAAGGACAGTGGAGGGGTGCATAGTGGCCCATGGAC...CTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR CAA 90 bp GGTTTGAACATGGCCTTCCCGAAATCCGAGAACCTCAGCACCAGCTaGAGGTGGACCCCACTGGGTTTCACAATCTGGGTGCAGTCACAT +
Preference number: 2 (lower is better)
Translates to: GLNMAFPKSENLSTS*RWTPLGFTIWVQSH
Trigger: ATGTGACTGCACCCAGATTGTGAAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAAGGCCATGTTCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR TCA 90 bp TCTAGGATTTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTCTTGCAGAAGTTTGCTaGCAACAGGGCTGGACCGGG +
Preference number: 2 (lower is better)
Translates to: SRISLVTFTILPTVGGTRLAEVC*QQGWTG
Trigger: CCCGGTCCAGCCCTGTTGTCAGCAAACTTCTGCAAG...ACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAAATCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR TCA 90 bp GAGGCGAGAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTCATCCCCGAACTTGGTaGACATCTCATAATGGTGCC +
Preference number: 2 (lower is better)
Translates to: EARGWRFHHGSVVRTLWRHPRTW*TSHNGA
Trigger: GGCACCATTATGAGATGTTCACCAAGTTCGGGGATG...ACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTCTCGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR GCA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCGCTTGGGCCAGCAGCTaGAGGTGCAAAAGTGTTTTC +
Preference number: 2 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSAAWASS*RCKSVF
Trigger: GAAAACACTTTTGCACCTGCAGCTGCTGGCCCAAGC...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR-3UTR GCA 90 bp ATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGGCACTCGAGTCGACTaGTCTGGCTCCAGGCGTATT +
Preference number: 2 (lower is better)
Translates to: MKPVLFGKNGARQRTTEAGTRVD*SGSRRI
Trigger: AATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCC...CGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR CAA 90 bp CCTATACCCAGATTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTaGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGC +
Preference number: 2 (lower is better)
Translates to: PIPRFPSALRRSSVA*MKPVLFGKNGARQR
Trigger: GCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR GCA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGTGCGCTGGCCCAAAGTaGAGATTTTTAGTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: WSRAPETKRSACLGPKCWCAGPK*RFLVSL
Trigger: CAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCA...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CCA 90 bp CTTCCCGAAATCCGAGAACCTCAGCACCAGCTTGAGGTGGACCCCACTGGGTTTAGAGAGGCGAGAGGATaGAGATTTCATCATGGGAGT +
Preference number: 2 (lower is better)
Translates to: LPEIREPQHQLEVDPTGFREARG*RFHHGS
Trigger: ACTCCCATGATGAAATCTCCATCCTCTCGCCTCTCT...AAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGAGGACAGGGCTGAGCTaGTCTTCCAGCAGTGATTCT +
Preference number: 2 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVRTGLS*SSSSDS
Trigger: AGAATCACTGCTGGAAGACCAGCTCAGCCCTGTCCT...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR-3UTR CCA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGCCAACTGTTCCACTaGGCCGTCGACTATGACACT +
Preference number: 2 (lower is better)
Translates to: FPSALRRSSVALMKPVLFGQLFH*AVDYDT
Trigger: AGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCC...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR-3UTR CCA 90 bp GTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAATCGAGTCGACTGCTCTaGCTCCAGGCGTATTTTCTG +
Preference number: 2 (lower is better)
Translates to: VLFGKNGARQRTTEAVHQSSRLL*LQAYFL
Trigger: CAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGA...TTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CCA 90 bp TTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTCGGAAGTCGTAGAAGAAGTCCACTaGTGTCTCCTCATCTCGCTG +
Preference number: 2 (lower is better)
Translates to: FLGDIYYPPHCWRHPSEVVEEVH*CLLISL
Trigger: CAGCGAGATGAGGAGACACCAGTGGACTTCTTCTAC...GACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR TCA 90 bp AGTACTCTCCTGGGATCAAGGCTGCCAAGCCTGACCTATACCCAGATTTCCCAGCTGGCGTTGTCAAGGTaGATAAGGAACCCATCATCC +
Preference number: 2 (lower is better)
Translates to: STLLGSRLPSLTYTQISQLALSR*IRNPSS
Trigger: GGATGATGGGTTCCTTATTCACCTTGACAACGCCAG...CTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTGATCCCAGGAGAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR-3UTR GCA 90 bp TTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGGCACTCGAGTCGACTaGTCTGGCTCCAGGCGTATT +
Preference number: 2 (lower is better)
Translates to: FSSMGPTCCLRKCPASFLGTRVD*SGSRRI
Trigger: AATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCC...TAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CCA 90 bp CATGGGCCACTATGCACCCCTCCACTGTCCTTAGGATGGTTTGGAGCCTTCGATATGGAGATTTCATCATaGGAGTGTCGTCCGAACCCT +
Preference number: 2 (lower is better)
Translates to: HGPLCTPPLSLGWFGAFDMEISS*ECRPNP
Trigger: AGGGTTCGGACGACACTCCCATGATGAAATCTCCAT...ATCGAAGGCTCCAAACCATCCTAAGGACAGTGGAGGGGTGCATAGTGGCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR-3UTR CCA 90 bp AGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCAGAGAGGCGAGAGGATaGAGATTTCATCATGGGAGT +
Preference number: 2 (lower is better)
Translates to: SQCFLGKTEQGNARQKRCREARG*RFHHGS
Trigger: ACTCCCATGATGAAATCTCCATCCTCTCGCCTCTCT...GCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR-3UTR CCA 90 bp GTGGGTTGCCACAGACAGCATACTCCGTCTTGCACATGTATGGACACTTGGCGATTTATCATGCAGCACTaGGAGAGAGGCGAGAGGATG +
Preference number: 2 (lower is better)
Translates to: VGCHRQHTPSCTCMDTWRFIMQH*ERGERM
Trigger: CATCCTCTCGCCTCTCTCCCAGTGCTGCATGATAAA...TCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CCA 90 bp GAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTTTTATCATGCAGCACTaGGAGAGAGGCGAGAGGATG +
Preference number: 2 (lower is better)
Translates to: EASAFWEKRSKATHDRSGFIMQH*ERGERM
Trigger: CATCCTCTCGCCTCTCTCCCAGTGCTGCATGATAAA...ACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR CAA 90 bp CAGCATACCAGTCATGTGGGGGTACCACGGGGTCAGAAGTGTTATTaGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCTTGGA +
Preference number: 2 (lower is better)
Translates to: QHTSHVGVPRGQKCY*SSRGYLCSHCRKLG
Trigger: TCCAAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCCGTGGTACCCCCACATGACTGGTATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR CAA 90 bp GGGTTGCCACAGACAGCATACTCCGTCTTGCACATGTATGGACACTaGGCGAAGAAGCACACGTTGCTCGCTGGAGAGACAAAGAAAACA +
Preference number: 2 (lower is better)
Translates to: GLPQTAYSVLHMYGH*AKKHTLLAGETKKT
Trigger: TGTTTTCTTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR TCA 90 bp ACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCTGGAGAGACAAAGACTGGTCTTCCAGCAGTaGTTCTCGCATCACATCGCT +
Preference number: 2 (lower is better)
Translates to: TCMDTWRRSTRCSLERQRLVFQQ*FSHHIA
Trigger: AGCGATGTGATGCGAGAATCACTGCTGGAAGACCAG...TCTTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR GCA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGTTTAAAGTTCTTCCATaGACATTGGAGGATGGGGGT +
Preference number: 2 (lower is better)
Translates to: WSRAPETKRSACLGPKCWFKVLP*TLEDGG
Trigger: ACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAA...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CCA 90 bp GAAAGCTGCGATCTCAGCATTGTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCGAGTCGGAGCTGCAGTaGGGGGTCCAGGGAGGTAAG +
Preference number: 2 (lower is better)
Translates to: ESCDLSIVSLKVNEVEEVESELQ*GVQGGK
Trigger: CTTACCTCCCTGGACCCCCCACTGCAGCTCCGACTC...GACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAGATCGCAGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CCA 90 bp GAAAGCTGCGATCTCAGCATTGTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCGGAACTGGACCCAGCTaGCCTCGAGTCGGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: ESCDLSIVSLKVNEVEEVGTGPS*PRVGAA
Trigger: TGCAGCTCCGACTCGAGGCCAGCTGGGTCCAGTTCC...GACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAGATCGCAGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR GCA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCTGCGCTGGCCCAAAGTaGAGATTTTTAGTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: DEASAFWEKRSKATHDRSCAGPK*RFLVSL
Trigger: CAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCA...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR GCA 90 bp GGGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAATGTCAGAGTTACTGTTaGCTGCGCTGGCCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: GVRSVICPVEAIFAHTAECQSYC*LRWPKV
Trigger: CACTTTGGGCCAGCGCAGGCAACAGTAACTCTGACA...TTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR GCA 90 bp TACTCCGTCTTGCACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCTGTCCAGATGGAAAGCTaGGATCTCAGCATTGTGTCT +
Preference number: 2 (lower is better)
Translates to: YSVLHMYGHLAKKHTLLAVQMES*DLSIVS
Trigger: AGACACAATGCTGAGATCGCAGCTTTCCATCTGGAC...AGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CCA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCCCACTGTCCTTAGGATaGTTTGGAGCCTTCGATCCA +
Preference number: 2 (lower is better)
Translates to: PTCCLRKCPASFLADLTPPLSLG*FGAFDP
Trigger: TGGATCGAAGGCTCCAAACCATCCTAAGGACAGTGG...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR-3UTR CCA 90 bp TTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTATCGAGTCGACTGCTCTaGCTCCAGGCGTATTTTCTG +
Preference number: 2 (lower is better)
Translates to: FSSMGPTCCLRKCPASFLSSRLL*LQAYFL
Trigger: CAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGA...TAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CCA 90 bp ATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGTACTGTTGCCTGCGCTaGCCCAAAGTGCAGATTTTT +
Preference number: 2 (lower is better)
Translates to: MKPVLFGKNGARQRTTEAYCCLR*PKVQIF
Trigger: AAAAATCTGCACTTTGGGCCAGCGCAGGCAACAGTA...CGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CCA 90 bp TCTAGGATTTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTAGAATCCTGTCCAGATaGAAAGCTGCGATCTCAGCA +
Preference number: 2 (lower is better)
Translates to: SRISLVTFTILPTVGGTRRILSR*KAAISA
Trigger: TGCTGAGATCGCAGCTTTCCATCTGGACAGGATTCT...ACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAAATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CAA 90 bp GGTACCACGGGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTaGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCTTGACC +
Preference number: 2 (lower is better)
Translates to: GTTGSEVLFVQSRLS*LTLQKAWRHFWFLT
Trigger: GGTCAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCCGTGGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR GCA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCTCTGAAACTGGACTCTaGCAGCCCTTAGCTTGTCAA +
Preference number: 2 (lower is better)
Translates to: PTCCLRKCPASFLADLTPSETGL*QPLACQ
Trigger: TTGACAAGCTAAGGGCTGGCAGAGTCCAGTTTCAGA...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR-3UTR GCA 90 bp GTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCAGAGTTACTGTTGCCTaGGCTGGCCCAAAGTGCAGA +
Preference number: 2 (lower is better)
Translates to: VRSVICPVEAIFAHTAESRVTVA*AGPKCR
Trigger: TCTGCACTTTGGGCCAGCGCAGGCAACAGTAACTCT...GCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR GCA 90 bp GAGGCGAGAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTACAAAGAAAACACTCTaGAGGATTTCATTCTTGGTG +
Preference number: 2 (lower is better)
Translates to: EARGWRFHHGSVVRTLWRTKKTL*RISFLV
Trigger: CACCAAGAATGAAATCCTGCAGAGTGTTTTCTTTGT...ACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTCTCGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CAA 90 bp TCTGTGTTTGAGAGGATTGGAAACCTGTGTGTTGCTTCTGTAGCGTaGGTGAGTGCCTCACCTGGTCAGATCTCAGTGAATGGTAGTGAT +
Preference number: 2 (lower is better)
Translates to: SVFERIGNLCVASVA*VSASPGQISVNGSD
Trigger: ATCACTACCATTCACTGAGATCTGACCAGGTGAGGCACTCACCAACGCTACAGAAGCAACACACAGGTTTCCAATCCTCTCAAACACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR TCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTACCAGGAGTTATCTTTaGCTTGTAGCTAGAATAAGG +
Preference number: 2 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLATRSYL*LVARIR
Trigger: CCTTATTCTAGCTACAAGTCAAAGATAACTCCTGGT...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR GCA 90 bp GCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCTTGACCTTTGTCAGAGTTACTGTTaGCTGCGCTGGCCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: AIFAHTAESLETFLVLDLCQSYC*LRWPKV
Trigger: CACTTTGGGCCAGCGCAGGCAACAGTAACTCTGACA...AAGGTCAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR GCA 90 bp GCATACTCCGTCTTGCACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGAGGTAAGGTTCATCTaGTCTCTGTACATCTTGTGT +
Preference number: 2 (lower is better)
Translates to: AYSVLHMYGHLAKKHTLLEVRFI*SLYILC
Trigger: ACACAAGATGTACAGAGAGCAGATGAACCTTACCTC...GAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR TCA 90 bp CTCAGCATTGTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCCACTGGTGTCTCCTGGCGTTGTCAAGGTaGATAAGGAACCCATCATCC +
Preference number: 2 (lower is better)
Translates to: LSIVSLKVNEVEEVHWCLLALSR*IRNPSS
Trigger: GGATGATGGGTTCCTTATTCACCTTGACAACGCCAG...GAGACACCAGTGGACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR TCA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGTCCAGGCGTATTTTCTaGAACTGGACTCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFESRRIF*NWTLPA
Trigger: GGCTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGA...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR TCA 90 bp AAAAGGAGTTTCAGATATCAACAAGTCAGGGAGAAGGTAGAGGAGACAAGGAATCAAGGCTGCCAAGCCTaGCCTATACCCAGATTTCCC +
Preference number: 2 (lower is better)
Translates to: KRSFRYQQVREKVEETRNQGCQA*PIPRFP
Trigger: GGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTG...ATTCCTTGTCTCCTCTACCTTCTCCCTGACTTGTTGATATCTGAAACTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CCA 90 bp TTACTCTCTCTGAGATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTCCATTAGTACTCTCCTaGGATCAAGGCTGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LLSLRFKVLPCTLEDGGCPLVLS*DQGCQA
Trigger: GGCTTGGCAGCCTTGATCCCAGGAGAGTACTAATGG...ACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATCTCAGAGAGAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR CAA 90 bp TTGCTCGCTGGAGAGACAAAGAAAACACTCTGCAGGATTTCATTCTaGGTGACCTCTAGGATTTCCTTGGTGACATTTACTATCCTCCCC +
Preference number: 2 (lower is better)
Translates to: LLAGETKKTLCRISF*VTSRISLVTFTILP
Trigger: GGGGAGGATAGTAAATGTCACCAAGGAAATCCTAGAGGTCACCAAGAATGAAATCCTGCAGAGTGTTTTCTTTGTCTCTCCAGCGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR GCA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGCCTTGGCTCTTTTCCTaGCTTACTCCAGGCTTGTGT +
Preference number: 2 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFEPWLFS*LTPGLC
Trigger: ACACAAGCCTGGAGTAAGGCAGGAAAAGAGCCAAGG...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CCA 90 bp GCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCTTGACCTTGAAGAAGATTGTGGTTaGTGGGCTGTAGTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: AIFAHTAESLETFLVLDLEEDCG*WAVVSL
Trigger: AAGGCTGACTACAGCCCACCAACCACAATCTTCTTC...AAGGTCAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CCA 90 bp GGGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAGCTTGGAGACATTTCTaGTTCTTGACCTTGTACTCT +
Preference number: 2 (lower is better)
Translates to: GVRSVICPVEAIFAHTAEAWRHF*FLTLYS
Trigger: AGAGTACAAGGTCAAGAACCAGAAATGTCTCCAAGC...TTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR TCA 90 bp ATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTACCAGGAGTTATCTTTaGCTTGTAGCTAGAATAAGG +
Preference number: 2 (lower is better)
Translates to: IQFHGPHLLFEKMSCFLPTRSYL*LVARIR
Trigger: CCTTATTCTAGCTACAAGTCAAAGATAACTCCTGGT...AGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR GCA 90 bp TTACTCTCTCTGAGATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTTGGAAACCTGTGTGTTaGTTCTGTAGCGTTGGTGAG +
Preference number: 2 (lower is better)
Translates to: LLSLRFKVLPCTLEDGGCWKPVC*FCSVGE
Trigger: CTCACCAACGCTACAGAAGCAACACACAGGTTTCCA...ACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATCTCAGAGAGAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR GCA 90 bp TACTCCGTCTTGCACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCTATTCAATCAATCATTTaGAGAAACTGTGAAGCACCT +
Preference number: 2 (lower is better)
Translates to: YSVLHMYGHLAKKHTLLAIQSII*RNCEAP
Trigger: AGGTGCTTCACAGTTTCTGCAAATGATTGATTGAAT...AGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CCA 90 bp AAAAGGAGTTTCAGATATCAACAAGTCAGGGAGAAGGTAGAGGAGACAAGGAATGAAGCCAGTGCTTTTTaGGAAAAACGGAGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: KRSFRYQQVREKVEETRNEASAF*EKRSKA
Trigger: TGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC...ATTCCTTGTCTCCTCTACCTTCTCCCTGACTTGTTGATATCTGAAACTCCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CCA 90 bp TTACTCTCTCTGAGATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTGCTTGGAGACATTTCTaGTTCTTGACCTTGTACTCT +
Preference number: 2 (lower is better)
Translates to: LLSLRFKVLPCTLEDGGCAWRHF*FLTLYS
Trigger: AGAGTACAAGGTCAAGAACCAGAAATGTCTCCAAGC...ACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATCTCAGAGAGAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR CCA 72 bp GAACTGGACCCAGCTGGCCTCGAGTCGGAGCTGCAGTaGGGGGTCCAGGGAGGTAAGGTTCATCTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: ELDPAGLESELQ*GVQGGKVHLLS
Trigger: AGAGAGCAGATGAACCTTACCTCCCTGGACCCCCCACTGCAGCTCCGACTCGAGGCCAGCTGGGTCCAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CCA 72 bp GTTAGCCTGGCCAGAGTCTGGGGCCAACTGTTCCACTaGGCCGTCGACTATGACACTCTGCTGTCCATGGGC +
Preference number: 3 (lower is better)
Translates to: VSLARVWGQLFH*AVDYDTLLSMG
Trigger: GCCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCCCCAGACTCTGGCCAGGCTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR-3UTR CAA 90 bp GAGGCGAGAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTCTATCCTCCCCACTGTaGGCGGCACCCGTCGGAAGT +
Preference number: 3 (lower is better)
Translates to: EARGWRFHHGSVVRTLWRLSSPL*AAPVGS
Trigger: ACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATAG...ACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTCTCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR TCA 72 bp AGTCTGGGGCCAACTGTTCCACTGGGCCGTCGACTATaGCACTCTGCTGTCCATGGGCCACTATGCACCCCT +
Preference number: 3 (lower is better)
Translates to: SLGPTVPLGRRL*HSAVHGPLCTP
Trigger: AGGGGTGCATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCCCCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR TCA 72 bp CTAGCTGACTTGACTCCCAGCAGTAACAGGTGGGAGTaGGGACGCAGGGTCGGCACTCGAGTCGACTGCTCT +
Preference number: 3 (lower is better)
Translates to: LADLTPSSNRWE*GRRVGTRVDCS
Trigger: AGAGCAGTCGACTCGAGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACTGCTGGGAGTCAAGTCAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR GCA 72 bp GCCAACTGTTCCACTGGGCCGTCGACTATGACACTCTaGTGTCCATGGGCCACTATGCACCCCTCCACTGTC +
Preference number: 3 (lower is better)
Translates to: ANCSTGPSTMTL*CPWATMHPSTV
Trigger: GACAGTGGAGGGGTGCATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR CCA 72 bp GTGAGGACGCAGGGTCGGCACTCGAGTCGACTGCTCTaGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCC +
Preference number: 3 (lower is better)
Translates to: VRTQGRHSSRLL*LQAYFLKLDSA
Trigger: GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCCGACCCTGCGTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR CCA 72 bp CGGCAGGAAGGCAGAGAGGGAACCCTCCAGCAGGTGTaGGTTGCCACAGACAGCATACTCCGTCTTGCACAT +
Preference number: 3 (lower is better)
Translates to: RQEGREGTLQQV*VATDSILRLAH
Trigger: ATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGTTCCCTCTCTGCCTTCCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CCA 72 bp TCCACTGGGCCGTCGACTATGACACTCTGCTGTCCATaGGCCACTATGCACCCCTCCACTGTCCTTAGGATG +
Preference number: 3 (lower is better)
Translates to: STGPSTMTLCCP*ATMHPSTVLRM
Trigger: CATCCTAAGGACAGTGGAGGGGTGCATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR CCA 72 bp CAGCCCTTAGCTTGTCAAGTTAGCCTGGCCAGAGTCTaGGGCCAACTGTTCCACTGGGCCGTCGACTATGAC +
Preference number: 3 (lower is better)
Translates to: QPLACQVSLARV*GQLFHWAVDYD
Trigger: GTCATAGTCGACGGCCCAGTGGAACAGTTGGCCCCAGACTCTGGCCAGGCTAACTTGACAAGCTAAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR TCA 72 bp GCTGGTCTTCCAGCAGTGATTCTCGCATCACATCGCTaGGTCTGTAGTCAGCTTGGGCCAGCAGCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: AGLPAVILASHR*VCSQLGPAAAG
Trigger: ACCTGCAGCTGCTGGCCCAAGCTGACTACAGACTCAGCGATGTGATGCGAGAATCACTGCTGGAAGACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000590873.5
3UTR GCA 72 bp AGGCTGCCAAGCCTGACCTATACCCAGATTTCCCAGTaGACTCAGGAGATCGTCGGTGGCCTTGATGAAGCC +
Preference number: 3 (lower is better)
Translates to: RLPSLTYTQISQ*TQEIVGGLDEA
Trigger: GGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp CAGCTTGAGGTGGACCCCACTGGGTTTCACAATCTGGGTGCAGTCACATGCCCCATGTCTTGCAGAAGTTaGCTGACAACAGGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: QLEVDPTGFHNLGAVTCPMSCRS*LTTGLD
Trigger: GTCCAGCCCTGTTGTCAGCAAACTTCTGCAAGACAT...GGGGCATGTGACTGCACCCAGATTGTGAAACCCAGTGGGGTCCACCTCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CCA 72 bp TTCCCGAAATCCGAGAACCTCAGCACCAGCTTGAGGTaGACCCCACTGGGTTTCACAATCTGGGTGCAGTCA +
Preference number: 3 (lower is better)
Translates to: FPKSENLSTSLR*TPLGFTIWVQS
Trigger: TGACTGCACCCAGATTGTGAAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CAA 90 bp GAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTCTGTCAGAGTTACTGTaGCCTGCGCTGGCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: EASAFWEKRSKATHDRSGLSELL*PALAQS
Trigger: ACTTTGGGCCAGCGCAGGCAACAGTAACTCTGACAG...ACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp GTAGAGCCCATGGCGGTTAATACCCAGGTGGAACTGGACCCAGCTGGCCTCGAGGAAGATGTGCAAAGCTaGGAAAACAGAGTTGCAAGG +
Preference number: 3 (lower is better)
Translates to: VEPMAVNTQVELDPAGLEEDVQS*ENRVAR
Trigger: CCTTGCAACTCTGTTTTCCAAGCTTTGCACATCTTC...CTCGAGGCCAGCTGGGTCCAGTTCCACCTGGGTATTAACCGCCATGGGCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CAA 90 bp CCCTCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAACTTGGTGAAGCCATGTCGATGACATaGAGGAGCCGCTGGCTGTTG +
Preference number: 3 (lower is better)
Translates to: PSGVVKVNKEPIIPELGEAMSMT*RSRWLL
Trigger: CAACAGCCAGCGGCTCCTCAATGTCATCGACATGGC...TTCACCAAGTTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR TCA 72 bp TGGGAGTGTCGTCCGAACCCTCTGGCGTTGTCAAGGTaGATAAGGAACCCATCATCCCCGAACTTGGTGAAC +
Preference number: 3 (lower is better)
Translates to: WECRPNPLALSR*IRNPSSPNLVN
Trigger: GTTCACCAAGTTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGAGGGTTCGGACGACACTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000590873.5
3UTR GCA 72 bp GCAGGTGTGGGTTGCCACAGACAGCATACTCCGTCTTaGACATGTATGGACACTTGGCGAAGAAGCACACGT +
Preference number: 3 (lower is better)
Translates to: AGVGCHRQHTPS*TCMDTWRRSTR
Trigger: ACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CCA 72 bp GTTGCCACAGACAGCATACTCCGTCTTGCACATGTATaGACACTTGGCGAAGAAGCACACGTTGCTCGCTGG +
Preference number: 3 (lower is better)
Translates to: VATDSILRLAHV*TLGEEAHVARW
Trigger: CCAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CAA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCCTGTCAGAGTTACTGTaGCCTGCGCTGGCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: DEASAFWEKRSKATHDRSLSELL*PALAQS
Trigger: ACTTTGGGCCAGCGCAGGCAACAGTAACTCTGACAG...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR TCA 72 bp ACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTaGAACTGGACTCTGCCAGCCCTTAGCTTGTCAAGT +
Preference number: 3 (lower is better)
Translates to: TRVDCSGSRRIF*NWTLPALSLSS
Trigger: ACTTGACAAGCTAAGGGCTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR GCA 72 bp GACCCCACTGGGTTTCACAATCTGGGTGCAGTCACATaGCCCCAGCAAGGCTTTCTCATCTTGACTGTAATC +
Preference number: 3 (lower is better)
Translates to: DPTGFHNLGAVT*PQQGFLILTVI
Trigger: GATTACAGTCAAGATGAGAAAGCCTTGCTGGGGGCATGTGACTGCACCCAGATTGTGAAACCCAGTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR-3UTR CAA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTTCCTTCCTAGCTGACTaGACTCCCAGCAGTAACAGG +
Preference number: 3 (lower is better)
Translates to: FPSALRRSSVALMKPVLFSFLAD*TPSSNR
Trigger: CCTGTTACTGCTGGGAGTCAAGTCAGCTAGGAAGGA...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGCCCCACTTGCTGTTaGAGAAAATGTCCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: DEASAFWEKRSKATHDRSGPTCC*RKCPAS
Trigger: GGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCC...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp AGTACTCTCCTGGGATCAAGGCTGCCAAGCCTGACCTATACCCAGATTTCCCAGAGATCGTCGGTGGCCTaGATGAAGCCAGTGCTTTTT +
Preference number: 3 (lower is better)
Translates to: STLLGSRLPSLTYTQISQRSSVA*MKPVLF
Trigger: AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT...CTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTGATCCCAGGAGAGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGATAGGCCAGGTGTTTaGTCTGGACCAGGAGTTATC +
Preference number: 3 (lower is better)
Translates to: FPSALRRSSVALMKPVLFDRPGV*SGPGVI
Trigger: GATAACTCCTGGTCCAGACAAAACACCTGGCCTATC...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp CCCTCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAACTTGGTGAACACATGTATGGACACTaGGCGAAGAAGCACACGTTG +
Preference number: 3 (lower is better)
Translates to: PSGVVKVNKEPIIPELGEHMYGH*AKKHTL
Trigger: CAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTG...TTCACCAAGTTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CCA 72 bp AGACAGCATACTCCGTCTTGCACATGTATGGACACTTaGCGAAGAAGCACACGTTGCTCGCTGGAGAGACAA +
Preference number: 3 (lower is better)
Translates to: RQHTPSCTCMDT*RRSTRCSLERQ
Trigger: TTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR TCA 72 bp GAAAACCAGTCCTTCGTTATAGGAGGTGGCGGGTTTTaGGGTAGAGCTGTAGCCTGCTTTCCTGAGAGTCTT +
Preference number: 3 (lower is better)
Translates to: ENQSFVIGGGGF*GRAVACFPESL
Trigger: AAGACTCTCAGGAAAGCAGGCTACAGCTCTACCTCAAAACCCGCCACCTCCTATAACGAAGGACTGGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR TCA 72 bp CCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTaGGAGGATTGGAAACCTGTGTGTTGCTTCTGTAGC +
Preference number: 3 (lower is better)
Translates to: PCTLEDGGCICV*EDWKPVCCFCS
Trigger: GCTACAGAAGCAACACACAGGTTTCCAATCCTCTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGTTCCATGGGCCCCACTaGCTGTTTGAGAAAATGTCC +
Preference number: 3 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFEFHGPH*LFEKMS
Trigger: GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAA...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp ATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGAAGTCAGGTATCCACTaGATGTCCTTTTATTTGACT +
Preference number: 3 (lower is better)
Translates to: MKPVLFGKNGARQRTTEAKSGIH*MSFYLT
Trigger: AGTCAAATAAAAGGACATCAAGTGGATACCTGACTT...CGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp AAAAGGAGTTTCAGATATCAACAAGTCAGGGAGAAGGTAGAGGAGACAAGGAATGGAAGAAGATTGTGGTaGGTGGGCTGTAGTCAGCCT +
Preference number: 3 (lower is better)
Translates to: KRSFRYQQVREKVEETRNGRRLW*VGCSQP
Trigger: AGGCTGACTACAGCCCACCAACCACAATCTTCTTCC...ATTCCTTGTCTCCTCTACCTTCTCCCTGACTTGTTGATATCTGAAACTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR TCA 72 bp AAGCTGCGATCTCAGCATTGTGTCTCTGAAAGTCAATaGAGTAGAAGAAGTCCACTGGTGTCTCCTCATCTC +
Preference number: 3 (lower is better)
Translates to: KLRSQHCVSESQ*SRRSPLVSPHL
Trigger: GAGATGAGGAGACACCAGTGGACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAGATCGCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR GCA 72 bp GGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTaGTCACACTGCAGAAAGCTTGGAGACATTTCTGGT +
Preference number: 3 (lower is better)
Translates to: GQKCYLSSRGYL*SHCRKLGDISG
Trigger: ACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR CCA 72 bp CAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCTTaGAGACATTTCTGGTTCTTGACCTTGTACTCTCTT +
Preference number: 3 (lower is better)
Translates to: QSRLSLLTLQKA*RHFWFLTLYSL
Trigger: AAGAGAGTACAAGGTCAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGCACACTGCAGAAAGCTaGGAGACATTTCTGGTTCTT +
Preference number: 3 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFEHTAES*ETFLVL
Trigger: AAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTG...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR-3UTR CAA 90 bp TTACTCTCTCTGAGATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTGGTCAGAAGTGTTATTaGTCCAGTCGAGGCTATCTT +
Preference number: 3 (lower is better)
Translates to: LLSLRFKVLPCTLEDGGCGQKCY*SSRGYL
Trigger: AAGATAGCCTCGACTGGACAAATAACACTTCTGACC...ACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATCTCAGAGAGAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR TCA 72 bp GGATTACTGATTCAGATGGGTCCAGTGACTAGAATATaGGTAGAAAGTGTGAGGTCTAATTTGAACCTGTCA +
Preference number: 3 (lower is better)
Translates to: GLLIQMGPVTRI*VESVRSNLNLS
Trigger: TGACAGGTTCAAATTAGACCTCACACTTTCTACTCATATTCTAGTCACTGGACCCATCTGAATCAGTAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR TCA 72 bp CAAAGTGAAAATTCAATCAATCATTTGCAGAAACTGTaGAGCACCTCCCAGAAGTTCATGAAGCACACTTGG +
Preference number: 3 (lower is better)
Translates to: QSENSINHLQKL*STSQKFMKHTW
Trigger: CCAAGTGTGCTTCATGAACTTCTGGGAGGTGCTTCACAGTTTCTGCAAATGATTGATTGAATTTTCACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR GCA 72 bp TGTACTCTCTTTAGTGACAGCTCCATTCTATTCTCATaGTTACAGTATTTGAACTCTGGCCTTTACTGGAAA +
Preference number: 3 (lower is better)
Translates to: CTLFSDSSILFS*LQYLNSGLYWK
Trigger: TTTCCAGTAAAGGCCAGAGTTCAAATACTGTAAGCATGAGAATAGAATGGAGCTGTCACTAAAGAGAGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR TCA 72 bp ATTTGCAGAAACTGTGAAGCACCTCCCAGAAGTTCATaGAGCACACTTGGAAAATTGTCTGATATTTCATTA +
Preference number: 3 (lower is better)
Translates to: ICRNCEAPPRSS*STLGKLSDISL
Trigger: TAATGAAATATCAGACAATTTTCCAAGTGTGCTTCATGAACTTCTGGGAGGTGCTTCACAGTTTCTGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp CAGCTTGAGGTGGACCCCACTGGGTTTCACAATCTGGGTGCAGTCACATGCCCCGCAGCGCCTCCTGGCTaGCCAGGAGCGAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QLEVDPTGFHNLGAVTCPAAPPG*PGASPR
Trigger: CCGAGGACTCGCTCCTGGCCAGCCAGGAGGCGCTGC...GGGGCATGTGACTGCACCCAGATTGTGAAACCCAGTGGGGTCCACCTCAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGGTGGGCCGGGGTCAGTaGGACCGGAATGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: WSRAPETKRSACLGPKCWVGRGQ*DRNAPR
Trigger: GCGGGGAGCATTCCGGTCTCACTGACCCCGGCCCAC...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp GGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACTCCCGCGACTCCTCCTaGGGGCGGCGGAGACGCCAG +
Preference number: 4 (lower is better)
Translates to: GLDEASAFWEKRSKATHDSRDSS*GRRRRQ
Trigger: CTGGCGTCTCCGCCGCCCGCAGGAGGAGTCGCGGGA...GTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp AGTACTCTCCTGGGATCAAGGCTGCCAAGCCTGACCTATACCCAGATTTCCCAGAGCCCCGGCATGGCGTaGTGGCCAAGGGGGACGCCG +
Preference number: 4 (lower is better)
Translates to: STLLGSRLPSLTYTQISQSPGMA*WPRGTP
Trigger: CGGCGTCCCCCTTGGCCAGCACGCCATGCCGGGGCT...CTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTGATCCCAGGAGAGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAAGGCGCAGCCCCGGCATaGCGTGCTGGCCAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VLFGKNGARQRTTEAVHQGAAPA*RAGQGG
Trigger: TCCCCCTTGGCCAGCACGCCATGCCGGGGCTGCGCC...TTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GAGGCGAGAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTTCCCGAGGCCGCAGCTaGCGCTGTACTTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EARGWRFHHGSVVRTLWRSRGRS*RCTWGQ
Trigger: CTGGCCCCAAGTACAGCGCCAGCTGCGGCCTCGGGA...ACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTCTCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCGCAGCGCCTCCTGGCTaGCCAGGAGCGAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSAAAPPG*PGASPR
Trigger: CCGAGGACTCGCTCCTGGCCAGCCAGGAGGCGCTGC...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR TCA 90 bp GTAGAGCCCATGGCGGTTAATACCCAGGTGGAACTGGACCCAGCTGGCCTCGAGACCTCAGCACCAGCTTaGGGTGGACCCCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: VEPMAVNTQVELDPAGLETSAPA*GGPHWV
Trigger: AACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGT...CTCGAGGCCAGCTGGGTCCAGTTCCACCTGGGTATTAACCGCCATGGGCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp TTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTCGGAAGTCTCGACCCGCTGTGGCTaGCGCCAGCCGGTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: FLGDIYYPPHCWRHPSEVSTRCG*RQPVQS
Trigger: GGACTGAACCGGCTGGCGGCAGCCACAGCGGGTCGA...GACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp AGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCCACGGGCGGCGCGAGTaGGGAGTTGGCGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SQCFLGKTEQGNARQKRCHGRRE*GVGEAG
Trigger: TCCTGCTTCGCCAACTCCCCACTCGCGCCGCCCGTG...GCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp TTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTCGGAAGTCGAGCTCGACCCGCTGTaGCTGCCGCCAGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: FLGDIYYPPHCWRHPSEVELDPL*LPPAGS
Trigger: TGAACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTC...GACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp AGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCTACCGCAGCGCCTCCTaGCTGGCCAGGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SQCFLGKTEQGNARQKRCYRSAS*LARSES
Trigger: GGACTCGCTCCTGGCCAGCCAGGAGGCGCTGCGGTA...GCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR TCA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTCCGGGGCGTCTCTCCTaGGGATGCTGTCGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: FPSALRRSSVALMKPVLFPGRLS*GCCRSA
Trigger: CGCCGAGCGACAGCATCCTCAGGAGAGACGCCCCGG...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp GTAGAGCCCATGGCGGTTAATACCCAGGTGGAACTGGACCCAGCTGGCCTCGAGCCAGCAGGTGTGGGTTaGCACAGACAGCATACTCCG +
Preference number: 4 (lower is better)
Translates to: VEPMAVNTQVELDPAGLEPAGVG*HRQHTP
Trigger: CGGAGTATGCTGTCTGTGGCAACCCACACCTGCTGG...CTCGAGGCCAGCTGGGTCCAGTTCCACCTGGGTATTAACCGCCATGGGCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp GAGGACGCAGGGTCGGCACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGTTCGGGAAAAGTTGTaGACGATCGTGCCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: EDAGSALESTALAPGVFSVREKL*TIVPGS
Trigger: GGACCCCGGCACGATCGTGCACAACTTTTCCCGAAC...AGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCCGACCCTGCGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTTCGACCCGCTGTGGCTaGCGCCAGCCGGTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLASTRCG*RQPVQS
Trigger: GGACTGAACCGGCTGGCGGCAGCCACAGCGGGTCGA...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTAGTGAGCCGAGGGAATaGGGTTCCCGGGGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLASEPRE*GSRGAR
Trigger: GCGGGCACCCCGGGAACCCCATTCCCTCGGCTCACT...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCCTGGAGTCCCGCGGGTaGGCCGGGGTCAGTGAGACC +
Preference number: 4 (lower is better)
Translates to: DEASAFWEKRSKATHDRSLESRG*AGVSET
Trigger: GGTCTCACTGACCCCGGCCCACCCGCGGGACTCCAG...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR TCA 90 bp AAGGCAGAGAGGGAACCCTCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCCTTGCAGAAGTTTGCTaGCAACAGGGCTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: KAEREPSSRCGLPQTAYSLAEVC*QQGWTG
Trigger: CCCGGTCCAGCCCTGTTGTCAGCAAACTTCTGCAAG...GGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGTTCCCTCTCTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp GAGGCGAGAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTCTGGGCCGTCGACTATaGCACTCTGCTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: EARGWRFHHGSVVRTLWRLGRRL*HSAVHG
Trigger: CCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAG...ACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTCTCGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR TCA 90 bp CTCCCAGCAGTAACAGGTGGGAGTGAGGACGCAGGGTCGGCACTCGAGTCGACTTCCAGGCGTATTTTCTaGAACTGGACTCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPAVTGGSEDAGSALESTSRRIF*NWTLPA
Trigger: GGCTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGA...AGTCGACTCGAGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACTGCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCTTCTCCGCGCCGAGTaGGCCGAGGGAATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVLLRAE*AEGMGF
Trigger: GAACCCCATTCCCTCGGCTCACTCGGCGCGGAGAAG...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp AGCCTGGCCAGAGTCTGGGGCCAACTGTTCCACTGGGCCGTCGACTATGACACTGTCCATGGGCCACTATaGACCCCTCCACTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SLARVWGQLFHWAVDYDTVHGPL*TPPLSL
Trigger: TAAGGACAGTGGAGGGGTGCATAGTGGCCCATGGAC...AGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCCCCAGACTCTGGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR CCA 90 bp CTTCCCGAAATCCGAGAACCTCAGCACCAGCTTGAGGTGGACCCCACTGGGTTTTATCCTCCCCACTGTTaGCGGCACCCGTCGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LPEIREPQHQLEVDPTGFYPPHC*RHPSEV
Trigger: GACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATA...AAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTCCACCCACTCTCCGCTaGCACCTGCCTCTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: FPSALRRSSVALMKPVLFPPTLR*HLPLAQ
Trigger: CTGCGCCAGAGGCAGGTGCCAGCGGAGAGTGGGTGG...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp AGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGTCCCGAGGCCGCAGCTaGCGCTGTACTTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSSVALMKPVLFGKNGARSRGRS*RCTWGQ
Trigger: CTGGCCCCAAGTACAGCGCCAGCTGCGGCCTCGGGA...CCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR TCA 90 bp GGACTCTGCCAGCCCTTAGCTTGTCAAGTTAGCCTGGCCAGAGTCTGGGGCCAACTCGCATCACATCGCTaGGTCTGTAGTCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GLCQPLACQVSLARVWGQLASHR*VCSQLG
Trigger: CCCAAGCTGACTACAGACTCAGCGATGTGATGCGAG...TTGGCCCCAGACTCTGGCCAGGCTAACTTGACAAGCTAAGGGCTGGCAGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR TCA 90 bp GAGGACGCAGGGTCGGCACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTCTGGTCTTCCAGCAGTaGTTCTCGCATCACATCGCT +
Preference number: 4 (lower is better)
Translates to: EDAGSALESTALAPGVFSLVFQQ*FSHHIA
Trigger: AGCGATGTGATGCGAGAATCACTGCTGGAAGACCAG...AGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCCGACCCTGCGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCAGTAACAGGTGGGAGTaGGGACGCAGGGTCGGCACT +
Preference number: 4 (lower is better)
Translates to: SQCFLGKTEQGNARQKRCSNRWE*GRRVGT
Trigger: AGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACT...GCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CTTCCCGAAATCCGAGAACCTCAGCACCAGCTTGAGGTGGACCCCACTGGGTTTCTGGGTGCAGTCACATaGCCCCAGCAAGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LPEIREPQHQLEVDPTGFLGAVT*PQQGFL
Trigger: GAGAAAGCCTTGCTGGGGGCATGTGACTGCACCCAG...AAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp GAGGACGCAGGGTCGGCACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTCCACTCCTCTTTTCCTaGCAGTGTGTAGGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: EDAGSALESTALAPGVFSPLLFS*QCVGAD
Trigger: ATCCGCTCCTACACACTGGCAGGAAAAGAGGAGTGG...AGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCCGACCCTGCGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTTGTCAAGGGAACTGGACCCAGCTaGCCTCGAGTCGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EDGDFIMGVSSEPSGVVKGTGPS*PRVGAA
Trigger: TGCAGCTCCGACTCGAGGCCAGCTGGGTCCAGTTCC...CTTGACAACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGGGAACTGGACCCAGCTaGCCTCGAGTCGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVGTGPS*PRVGAA
Trigger: TGCAGCTCCGACTCGAGGCCAGCTGGGTCCAGTTCC...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp CTCCCAGCAGTAACAGGTGGGAGTGAGGACGCAGGGTCGGCACTCGAGTCGACTTTTATCATGCAGCACTaGGAGAGAGGCGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: LPAVTGGSEDAGSALESTFIMQH*ERGERM
Trigger: CATCCTCTCGCCTCTCTCCCAGTGCTGCATGATAAA...AGTCGACTCGAGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACTGCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GGACTCTGCCAGCCCTTAGCTTGTCAAGTTAGCCTGGCCAGAGTCTGGGGCCAAGGCCAACTGTTCCACTaGGCCGTCGACTATGACACT +
Preference number: 4 (lower is better)
Translates to: GLCQPLACQVSLARVWGQGQLFH*AVDYDT
Trigger: AGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCC...TTGGCCCCAGACTCTGGCCAGGCTAACTTGACAAGCTAAGGGCTGGCAGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR CCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCGGGCTAGTCCCCTGTaGAGGGGTGTCGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVRASPL*RGVAPQ
Trigger: TTGAGGAGCGACACCCCTCCACAGGGGACTAGCCCG...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp ATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTGGCAGAAGAGGTGCCTaGAGTCCCGCGGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: IQFHGPHLLFEKMSCFLPGRRGA*SPAGGP
Trigger: CGGCCCACCCGCGGGACTCCAGGCACCTCTTCTGCC...AGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR TCA 90 bp GTAGAGCCCATGGCGGTTAATACCCAGGTGGAACTGGACCCAGCTGGCCTCGAGCATCCCCGAACTTGGTaGACATCTCATAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: VEPMAVNTQVELDPAGLEHPRTW*TSHNGA
Trigger: GGCACCATTATGAGATGTTCACCAAGTTCGGGGATG...CTCGAGGCCAGCTGGGTCCAGTTCCACCTGGGTATTAACCGCCATGGGCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp GGACTCTGCCAGCCCTTAGCTTGTCAAGTTAGCCTGGCCAGAGTCTGGGGCCAACTGGTCTTCCAGCAGTaGTTCTCGCATCACATCGCT +
Preference number: 4 (lower is better)
Translates to: GLCQPLACQVSLARVWGQLVFQQ*FSHHIA
Trigger: AGCGATGTGATGCGAGAATCACTGCTGGAAGACCAG...TTGGCCCCAGACTCTGGCCAGGCTAACTTGACAAGCTAAGGGCTGGCAGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR TCA 90 bp GGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGTAACAGGTGGGAGTaGGGACGCAGGGTCGGCACT +
Preference number: 4 (lower is better)
Translates to: GLDEASAFWEKRSKATHDSNRWE*GRRVGT
Trigger: AGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACT...GTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGGGAGGTGGCGGGTTTTaGGGTAGAGCTGTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVGGGGF*GRAVAC
Trigger: GCAGGCTACAGCTCTACCTCAAAACCCGCCACCTCC...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp AGTGTGAGGTCTAATTTGAACCTGTCAGAGTTACTGTTGCCTGCGCTGGCCCAAGGGGTGCCCGCTTCTTaGGCCTTTTCTCCCGTGCGC +
Preference number: 4 (lower is better)
Translates to: SVRSNLNLSELLLPALAQGVPAS*AFSPVR
Trigger: GCGCACGGGAGAAAAGGCGCAAGAAGCGGGCACCCC...TTGGGCCAGCGCAGGCAACAGTAACTCTGACAGGTTCAAATTAGACCTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp AGTACTCTCCTGGGATCAAGGCTGCCAAGCCTGACCTATACCCAGATTTCCCAGATGGGGTTCCCGGGGTaGCCGCTTCTTGCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: STLLGSRLPSLTYTQISQMGFPG*PLLAPF
Trigger: AAAAGGCGCAAGAAGCGGGCACCCCGGGAACCCCAT...CTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTGATCCCAGGAGAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp AAGGCAGAGAGGGAACCCTCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCCCACTCCTCTTTTCCTaGCAGTGTGTAGGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: KAEREPSSRCGLPQTAYSPLLFS*QCVGAD
Trigger: ATCCGCTCCTACACACTGGCAGGAAAAGAGGAGTGG...GGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGTTCCCTCTCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp TCTAGGATTTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTGAGTCGGAGCTGCAGTaGGGGGTCCAGGGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: SRISLVTFTILPTVGGTRESELQ*GVQGGK
Trigger: CTTACCTCCCTGGACCCCCCACTGCAGCTCCGACTC...ACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAAATCCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp AGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGGAGTCGGAGCTGCAGTaGGGGGTCCAGGGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: RSSVALMKPVLFGKNGARESELQ*GVQGGK
Trigger: CTTACCTCCCTGGACCCCCCACTGCAGCTCCGACTC...CCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp AGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCCGGTTAATACCCAGGTaGAACTGGACCCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SQCFLGKTEQGNARQKRCRLIPR*NWTQLA
Trigger: GGCCAGCTGGGTCCAGTTCCACCTGGGTATTAACCG...GCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp CTCCCAGCAGTAACAGGTGGGAGTGAGGACGCAGGGTCGGCACTCGAGTCGACTACATGTATGGACACTTaGCGAAGAAGCACACGTTGC +
Preference number: 4 (lower is better)
Translates to: LPAVTGGSEDAGSALESTTCMDT*RRSTRC
Trigger: GCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGT...AGTCGACTCGAGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACTGCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGCCTGGCCAGAGTCTaGGGCCAACTGTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: GLDEASAFWEKRSKATHDSLARV*GQLFHW
Trigger: CCAGTGGAACAGTTGGCCCCAGACTCTGGCCAGGCT...GTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGAGCCTGGCCAGAGTCTaGGGCCAACTGTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVSLARV*GQLFHW
Trigger: CCAGTGGAACAGTTGGCCCCAGACTCTGGCCAGGCT...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAAAGCCTGGCCAGAGTCTaGGGCCAACTGTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: VLFGKNGARQRTTEAVHQSLARV*GQLFHW
Trigger: CCAGTGGAACAGTTGGCCCCAGACTCTGGCCAGGCT...TTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGGGCCGGGGACAATCCTaGGGTCTTAGGGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: WSRAPETKRSACLGPKCWGRGQS*GLREED
Trigger: ATCTTCTTCCCTAAGACCCCAGGATTGTCCCCGGCC...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GGGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAGCGCGAGTGGGGAGTTaGCGAAGCAGGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GVRSVICPVEAIFAHTAEARVGS*RSRSGS
Trigger: GGAGCCGCTCCTGCTTCGCCAACTCCCCACTCGCGC...TTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGTGTCGCTCCTCAACTTaGGGACCAGGTGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVCRSST*GPGARS
Trigger: GCTCCGTGCACCTGGTCCCCAAGTTGAGGAGCGACA...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GGGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAGAGCTCGACCCGCTGTaGCTGCCGCCAGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: GVRSVICPVEAIFAHTAEELDPL*LPPAGS
Trigger: TGAACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTC...TTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTAGAGGGCCTGCAACTTaGAGCTCGACCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FPSALRRSSVALMKPVLFRGPAT*SSTRCG
Trigger: GCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCT...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTACGTTGTACAGCGGGTaGGCGAAGAGGGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: EASAFWEKRSKATHDRSGTLYSG*AKRACN
Trigger: GTTGCAGGCCCTCTTCGCCCACCCGCTGTACAACGT...ACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GAGTCTGTAGTCAGCTTGGGCCAGCAGCTGCAGGTGCAAAAGTGTTTTCTTTTTTACCGCAGCGCCTCCTaGCTGGCCAGGAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: ESVVSLGQQLQVQKCFLFYRSAS*LARSES
Trigger: GGACTCGCTCCTGGCCAGCCAGGAGGCGCTGCGGTA...AAAAAGAAAACACTTTTGCACCTGCAGCTGCTGGCCCAAGCTGACTACAGACTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CAA 72 bp ATGGCCTTCCCGAAATCCGAGAACCTCAGCACCAGCTaGAGGTGGACCCCACTGGGTTTCACAATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: MAFPKSENLSTS*RWTPLGFTIWV
Trigger: CACCCAGATTGTGAAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp AAGGCAGAGAGGGAACCCTCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCCTGGCGTTGTCAAGGTaGATAAGGAACCCATCATCC +
Preference number: 4 (lower is better)
Translates to: KAEREPSSRCGLPQTAYSLALSR*IRNPSS
Trigger: GGATGATGGGTTCCTTATTCACCTTGACAACGCCAG...GGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGTTCCCTCTCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp GAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGCTGGGCCGTCGACTATaGCACTCTGCTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: EIVGGLDEASAFWEKRSKLGRRL*HSAVHG
Trigger: CCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAG...CTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCCAAGGCTGCCAAGCCTaGCCTATACCCAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: SQCFLGKTEQGNARQKRCQGCQA*PIPRFP
Trigger: GGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTG...GCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTCCAGCAGGTGTGGGTTaGCACAGACAGCATACTCCG +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLAPAGVG*HRQHTP
Trigger: CGGAGTATGCTGTCTGTGGCAACCCACACCTGCTGG...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp GAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTTGTCAAGGGCACTCGAGTCGACTaGTCTGGCTCCAGGCGTATT +
Preference number: 4 (lower is better)
Translates to: EDGDFIMGVSSEPSGVVKGTRVD*SGSRRI
Trigger: AATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCC...CTTGACAACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR GCA 90 bp GGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACGGCACTCGAGTCGACTaGTCTGGCTCCAGGCGTATT +
Preference number: 4 (lower is better)
Translates to: GLDEASAFWEKRSKATHDGTRVD*SGSRRI
Trigger: AATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCC...GTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GCCAAGCCTGACCTATACCCAGATTTCCCAGTGCACTCAGGAGATCGTCGGTGGACCCAGATTTCCCAGTaGACTCAGGAGATCGTCGGT +
Preference number: 4 (lower is better)
Translates to: AKPDLYPDFPVHSGDRRWTQISQ*TQEIVG
Trigger: ACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGT...CCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GCCAAGCCTGACCTATACCCAGATTTCCCAGTGCACTCAGGAGATCGTCGGTGGAGAGTTACTGTTGCCTaGGCTGGCCCAAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: AKPDLYPDFPVHSGDRRWRVTVA*AGPKCR
Trigger: TCTGCACTTTGGGCCAGCGCAGGCAACAGTAACTCT...CCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAGTGGGGAGCCCTATGCTaGAGTAGGGCCACAACAGTT +
Preference number: 4 (lower is better)
Translates to: LESTALAPGVFSETGLCQWGALC*SRATTV
Trigger: AACTGTTGTGGCCCTACTGCAGCATAGGGCTCCCCA...CTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TCGTCCGAACCCTCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAAATACCCAGGTGGAACTaGACCCAGCTGGCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: SSEPSGVVKVNKEPIIPEIPRWN*TQLASS
Trigger: ACTCGAGGCCAGCTGGGTCCAGTTCCACCTGGGTAT...TTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGAGGGTTCGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTTATCCTCCCCACTGTTaGCGGCACCCGTCGGAAGTC +
Preference number: 4 (lower is better)
Translates to: FPSALRRSSVALMKPVLFYPPHC*RHPSEV
Trigger: GACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATA...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GAGGACGCAGGGTCGGCACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTATGGAGATTTCATCATaGGAGTGTCGTCCGAACCCT +
Preference number: 4 (lower is better)
Translates to: EDAGSALESTALAPGVFSMEISS*ECRPNP
Trigger: AGGGTTCGGACGACACTCCCATGATGAAATCTCCAT...AGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCCGACCCTGCGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGGTCCTTAGGATGGTTTaGAGCCTTCGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WSRAPETKRSACLGPKCWVLRMV*SLRSRA
Trigger: TGCCCTGGATCGAAGGCTCCAAACCATCCTAAGGAC...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGGAAGATTGTGGTTGGTaGGCTGTAGTCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: WSRAPETKRSACLGPKCWEDCGW*AVVSLG
Trigger: GCCAAGGCTGACTACAGCCCACCAACCACAATCTTC...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCGGCCGGGGACAATCCTaGGGTCTTAGGGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSAGRGQS*GLREED
Trigger: ATCTTCTTCCCTAAGACCCCAGGATTGTCCCCGGCC...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GCCAAGCCTGACCTATACCCAGATTTCCCAGTGCACTCAGGAGATCGTCGGTGGGGTGAGTGCCTCACCTaGTCAGATCTCAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: AKPDLYPDFPVHSGDRRWGECLT*SDLSEW
Trigger: CCATTCACTGAGATCTGACCAGGTGAGGCACTCACC...CCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGGCTTGTCTGTGCGCCTaGACTCCTAGAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVACLCA*TPRGRG
Trigger: ACCTCTGCCTCTAGGAGTCCAGGCGCACAGACAAGC...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR TCA 90 bp AGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCTTGCAGAAGTTTGCTaGCAACAGGGCTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: RSSVALMKPVLFGKNGARLAEVC*QQGWTG
Trigger: CCCGGTCCAGCCCTGTTGTCAGCAAACTTCTGCAAG...CCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR TCA 90 bp GGAGAGAGGCGAGAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTCTGGTCTTCCAGCAGTaGTTCTCGCATCACATCGCT +
Preference number: 4 (lower is better)
Translates to: GERREDGDFIMGVSSEPSLVFQQ*FSHHIA
Trigger: AGCGATGTGATGCGAGAATCACTGCTGGAAGACCAG...AGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTCTCGCCTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000590873.5
CDS-3UTR TCA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCCTGGTCTTCCAGCAGTaGTTCTCGCATCACATCGCT +
Preference number: 4 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSALVFQQ*FSHHIA
Trigger: AGCGATGTGATGCGAGAATCACTGCTGGAAGACCAG...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp CTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAGTCCAGGCGTATTTTCTaGAACTGGACTCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LESTALAPGVFSETGLCQSRRIF*NWTLPA
Trigger: GGCTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGA...CTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGGCCCCACTTGCTGTTTaGGAAAATGTCCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: WSRAPETKRSACLGPKCWAPLAV*ENVLLP
Trigger: AGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGC...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp GGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACCAAGGCTGCCAAGCCTaGCCTATACCCAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: GLDEASAFWEKRSKATHDQGCQA*PIPRFP
Trigger: GGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTG...GTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGTCGACTATGACACTCTaGTGTCCATGGGCCACTATG +
Preference number: 4 (lower is better)
Translates to: WSRAPETKRSACLGPKCWSTMTL*CPWATM
Trigger: CATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGA...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCTGTCAGAGTTACTGTTaGCTGCGCTGGCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSACQSYC*LRWPKV
Trigger: CACTTTGGGCCAGCGCAGGCAACAGTAACTCTGACA...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CTCCCAGCAGTAACAGGTGGGAGTGAGGACGCAGGGTCGGCACTCGAGTCGACTTTTAAAGTTCTTCCATaGACATTGGAGGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: LPAVTGGSEDAGSALESTFKVLP*TLEDGG
Trigger: ACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAA...AGTCGACTCGAGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACTGCTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAATGGGGAGCCCTATGCTaGAGTAGGGCCACAACAGTT +
Preference number: 4 (lower is better)
Translates to: VLFGKNGARQRTTEAVHQWGALC*SRATTV
Trigger: AACTGTTGTGGCCCTACTGCAGCATAGGGCTCCCCA...TTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCTCAGTGAGACCGGAATaGTCCCCGCGCGGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: QSRLSLLTLQKAWRHFWFSVRPE*SPRGLV
Trigger: GACTAGCCCGCGCGGGGAGCATTCCGGTCTCACTGA...GAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp TTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAAGTTGTGCACGATCGTaGCGGGGTCCGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FSSMGPTCCLRKCPASFLSCARS*RGPRQL
Trigger: CAGCTGCCTCGGACCCCGGCACGATCGTGCACAACT...TAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp TCTAGGATTTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTCGGTTAATACCCAGGTaGAACTGGACCCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SRISLVTFTILPTVGGTRRLIPR*NWTQLA
Trigger: GGCCAGCTGGGTCCAGTTCCACCTGGGTATTAACCG...ACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAAATCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp TCGTCCGAACCCTCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAACTGGGTTTCACAATCTaGGTGCAGTCACATGCCCCC +
Preference number: 4 (lower is better)
Translates to: SSEPSGVVKVNKEPIIPELGFTI*VQSHAP
Trigger: GGGGGCATGTGACTGCACCCAGATTGTGAAACCCAG...TTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGAGGGTTCGGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp TCGTCCGAACCCTCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAAAGCACCAGCTTGAGGTaGACCCCACTGGGTTTCACA +
Preference number: 4 (lower is better)
Translates to: SSEPSGVVKVNKEPIIPESTSLR*TPLGFT
Trigger: TGTGAAACCCAGTGGGGTCCACCTCAAGCTGGTGCT...TTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGAGGGTTCGGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp TCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCGTCTTGCACATGTATGGAACCCTCCAGCAGGTGTaGGTTGCCACAGACAGCATA +
Preference number: 4 (lower is better)
Translates to: SSRCGLPQTAYSVLHMYGTLQQV*VATDSI
Trigger: TATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGT...TCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp TTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTCGGAAGTCAGGACAGGGCTGAGCTaGTCTTCCAGCAGTGATTCT +
Preference number: 4 (lower is better)
Translates to: FLGDIYYPPHCWRHPSEVRTGLS*SSSSDS
Trigger: AGAATCACTGCTGGAAGACCAGCTCAGCCCTGTCCT...GACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTCTTGTCAAGTTAGCCTaGCCAGAGTCTGGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLALVKLA*PESGAN
Trigger: GTTGGCCCCAGACTCTGGCCAGGCTAACTTGACAAG...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TGGGGTCTTAGGGAAGAAGATTGTGGTTGGTGGGCTGTAGTCAGCCTTGGCTCTCTTGTCAAGTTAGCCTaGCCAGAGTCTGGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: WGLREEDCGWWAVVSLGSLVKLA*PESGAN
Trigger: GTTGGCCCCAGACTCTGGCCAGGCTAACTTGACAAG...AGAGCCAAGGCTGACTACAGCCCACCAACCACAATCTTCTTCCCTAAGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp CATGGGCCACTATGCACCCCTCCACTGTCCTTAGGATGGTTTGGAGCCTTCGATTCGAGTCGACTGCTCTaGCTCCAGGCGTATTTTCTG +
Preference number: 4 (lower is better)
Translates to: HGPLCTPPLSLGWFGAFDSSRLL*LQAYFL
Trigger: CAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGA...ATCGAAGGCTCCAAACCATCCTAAGGACAGTGGAGGGGTGCATAGTGGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR CCA 90 bp CCGTCGACTATGACACTCTGCTGTCCATGGGCCACTATGCACCCCTCCACTGTCGAAGCCAGTGCTTTTTaGGAAAAACGGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PSTMTLCCPWATMHPSTVEASAF*EKRSKA
Trigger: TGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC...GACAGTGGAGGGGTGCATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR CCA 90 bp ACTATGACACTCTGCTGTCCATGGGCCACTATGCACCCCTCCACTGTCCTTAGGCCATTAGTACTCTCCTaGGATCAAGGCTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TMTLCCPWATMHPSTVLRPLVLS*DQGCQA
Trigger: GGCTTGGCAGCCTTGATCCCAGGAGAGTACTAATGG...CCTAAGGACAGTGGAGGGGTGCATAGTGGCCCATGGACAGCAGAGTGTCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR CCA 90 bp CTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAGCCATTAGTACTCTCCTaGGATCAAGGCTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LESTALAPGVFSETGLCQPLVLS*DQGCQA
Trigger: GGCTTGGCAGCCTTGATCCCAGGAGAGTACTAATGG...CTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGAGCATACCAGTCATGTaGGGGTACCACGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVSIPVM*GYHGVR
Trigger: TCTGACCCCGTGGTACCCCCACATGACTGGTATGCT...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp ACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCTGGAGAGACAAAGAACGTTGTACAGCGGGTaGGCGAAGAGGGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: TCMDTWRRSTRCSLERQRTLYSG*AKRACN
Trigger: GTTGCAGGCCCTCTTCGCCCACCCGCTGTACAACGT...TCTTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
3UTR CAA 72 bp AGCAGGTGTGGGTTGCCACAGACAGCATACTCCGTCTaGCACATGTATGGACACTTGGCGAAGAAGCACACG +
Preference number: 4 (lower is better)
Translates to: SRCGLPQTAYSV*HMYGHLAKKHT
Trigger: CGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp ACTATGCACCCCTCCACTGTCCTTAGGATGGTTTGGAGCCTTCGATCCAGGGCACTGGCGTTGTCAAGGTaGATAAGGAACCCATCATCC +
Preference number: 4 (lower is better)
Translates to: TMHPSTVLRMVWSLRSRALALSR*IRNPSS
Trigger: GGATGATGGGTTCCTTATTCACCTTGACAACGCCAG...TGCCCTGGATCGAAGGCTCCAAACCATCCTAAGGACAGTGGAGGGGTGCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR TCA 90 bp GTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAACTGGGCCGTCGACTATaGCACTCTGCTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: VHQGVKIQFHGPHLLFEKLGRRL*HSAVHG
Trigger: CCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAG...TTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp CTCCCAGCAGTAACAGGTGGGAGTGAGGACGCAGGGTCGGCACTCGAGTCGACTACCAGGAGTTATCTTTaGCTTGTAGCTAGAATAAGG +
Preference number: 4 (lower is better)
Translates to: LPAVTGGSEDAGSALESTTRSYL*LVARIR
Trigger: CCTTATTCTAGCTACAAGTCAAAGATAACTCCTGGT...AGTCGACTCGAGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACTGCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp CAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCGGAGGTGGCGGGTTTTaGGGTAGAGCTGTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QSRLSLLTLQKAWRHFWFGGGGF*GRAVAC
Trigger: GCAGGCTACAGCTCTACCTCAAAACCCGCCACCTCC...GAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp GGGAAAGTGCCTCATGTCTTGCAGAAGTTTGCTGACAACAGGGCTGGACCGGGACACAGTAAAGGGGATTaGCCTCCCACTCCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GKVPHVLQKFADNRAGPGHSKGD*PPTPLF
Trigger: GAAAAGAGGAGTGGGAGGTCAATCCCCTTTACTGTG...TCCCGGTCCAGCCCTGTTGTCAGCAAACTTCTGCAAGACATGAGGCACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCCACAGTAAAGGGGATTaGCCTCCCACTCCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSAHSKGD*PPTPLF
Trigger: GAAAAGAGGAGTGGGAGGTCAATCCCCTTTACTGTG...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp TGCCAGCCCTTAGCTTGTCAAGTTAGCCTGGCCAGAGTCTGGGGCCAACTGTTCGTCCAGATGGAAAGCTaGGATCTCAGCATTGTGTCT +
Preference number: 4 (lower is better)
Translates to: CQPLACQVSLARVWGQLFVQMES*DLSIVS
Trigger: AGACACAATGCTGAGATCGCAGCTTTCCATCTGGAC...GAACAGTTGGCCCCAGACTCTGGCCAGGCTAACTTGACAAGCTAAGGGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR GCA 90 bp GGGAAAGTGCCTCATGTCTTGCAGAAGTTTGCTGACAACAGGGCTGGACCGGGACGAAGAAGCACACGTTaGTCGCTGGAGAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: GKVPHVLQKFADNRAGPGRRSTR*SLERQR
Trigger: TCTTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCG...TCCCGGTCCAGCCCTGTTGTCAGCAAACTTCTGCAAGACATGAGGCACTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp GTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAAGCTTGGGCCAGCAGCTaGAGGTGCAAAAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VLFGKNGARQRTTEAVHQAWASS*RCKSVF
Trigger: GAAAACACTTTTGCACCTGCAGCTGCTGGCCCAAGC...TTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp AGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGGTCCATGGGCCACTATaGACCCCTCCACTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: RSSVALMKPVLFGKNGARVHGPL*TPPLSL
Trigger: TAAGGACAGTGGAGGGGTGCATAGTGGCCCATGGAC...CCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp AAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAAGGAGTAAAGATTGGCACTCGAGTCGACTaGTCTGGCTCCAGGCGTATT +
Preference number: 4 (lower is better)
Translates to: KNGARQRTTEAVHQGVKIGTRVD*SGSRRI
Trigger: AATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCC...AATCTTTACTCCTTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGACCCAGATTTCCCAGTaGACTCAGGAGATCGTCGGT +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVTQISQ*TQEIVG
Trigger: ACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGT...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTACCCAGATTTCCCAGTaGACTCAGGAGATCGTCGGT +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLATQISQ*TQEIVG
Trigger: ACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGT...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp ATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGAAGTGGGGAGCCCTATaGTGCAGTAGGGCCACAACA +
Preference number: 4 (lower is better)
Translates to: MKPVLFGKNGARQRTTEAKWGAL*CSRATT
Trigger: TGTTGTGGCCCTACTGCAGCATAGGGCTCCCCACTT...CGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCCTGGGTTTCACAATCTaGGTGCAGTCACATGCCCCC +
Preference number: 4 (lower is better)
Translates to: DEASAFWEKRSKATHDRSLGFTI*VQSHAP
Trigger: GGGGGCATGTGACTGCACCCAGATTGTGAAACCCAG...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCAGCACCAGCTTGAGGTaGACCCCACTGGGTTTCACA +
Preference number: 4 (lower is better)
Translates to: DEASAFWEKRSKATHDRSSTSLR*TPLGFT
Trigger: TGTGAAACCCAGTGGGGTCCACCTCAAGCTGGTGCT...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GGGAAAGTGCCTCATGTCTTGCAGAAGTTTGCTGACAACAGGGCTGGACCGGGATTTATCATGCAGCACTaGGAGAGAGGCGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: GKVPHVLQKFADNRAGPGFIMQH*ERGERM
Trigger: CATCCTCTCGCCTCTCTCCCAGTGCTGCATGATAAA...TCCCGGTCCAGCCCTGTTGTCAGCAAACTTCTGCAAGACATGAGGCACTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp AGTACTCTCCTGGGATCAAGGCTGCCAAGCCTGACCTATACCCAGATTTCCCAGAGGACAGGGCTGAGCTaGTCTTCCAGCAGTGATTCT +
Preference number: 4 (lower is better)
Translates to: STLLGSRLPSLTYTQISQRTGLS*SSSSDS
Trigger: AGAATCACTGCTGGAAGACCAGCTCAGCCCTGTCCT...CTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTGATCCCAGGAGAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGCCAACTGTTCCACTaGGCCGTCGACTATGACACT +
Preference number: 4 (lower is better)
Translates to: DEASAFWEKRSKATHDRSGQLFH*AVDYDT
Trigger: AGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCC...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp AGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCTTGTCAAGTTAGCCTaGCCAGAGTCTGGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RSSVALMKPVLFGKNGARLVKLA*PESGAN
Trigger: GTTGGCCCCAGACTCTGGCCAGGCTAACTTGACAAG...CCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGTCGAGTCGACTGCTCTaGCTCCAGGCGTATTTTCTG +
Preference number: 4 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVSSRLL*LQAYFL
Trigger: CAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGA...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GAGGACGCAGGGTCGGCACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGCTTGGAGACATTTCTaGTTCTTGACCTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: EDAGSALESTALAPGVFSAWRHF*FLTLYS
Trigger: AGAGTACAAGGTCAAGAACCAGAAATGTCTCCAAGC...AGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCCGACCCTGCGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GAGGACGCAGGGTCGGCACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTACACTGCAGAAAGCTTaGAGACATTTCTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: EDAGSALESTALAPGVFSTLQKA*RHFWFL
Trigger: CAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGT...AGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCCGACCCTGCGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR CAA 72 bp CAGACAGCATACTCCGTCTTGCACATGTATGGACACTaGGCGAAGAAGCACACGTTGCTCGCTGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: QTAYSVLHMYGH*AKKHTLLAGET
Trigger: TGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp GAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTTGTCAAGGACTGTAATCAGCACTaGTGGTGGGAAAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: EDGDFIMGVSSEPSGVVKDCNQH*WWESAS
Trigger: TGAGGCACTTTCCCACCATCAGTGCTGATTACAGTC...CTTGACAACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGGACTGTAATCAGCACTaGTGGTGGGAAAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVDCNQH*WWESAS
Trigger: TGAGGCACTTTCCCACCATCAGTGCTGATTACAGTC...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR TCA 90 bp CTTCCCGAAATCCGAGAACCTCAGCACCAGCTTGAGGTGGACCCCACTGGGTTTCTAGGATTTCCTTGGTaGCATTTACTATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPEIREPQHQLEVDPTGFLGFPW*HLLSSP
Trigger: TGGGGAGGATAGTAAATGTCACCAAGGAAATCCTAG...AAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp GAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTCATCCCCGAACTTGGTaGACATCTCATAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: EASAFWEKRSKATHDRSGHPRTW*TSHNGA
Trigger: GGCACCATTATGAGATGTTCACCAAGTTCGGGGATG...ACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCAGGAGAGACAGTGAATaGAGTGGGGAGCCCTATGCT +
Preference number: 4 (lower is better)
Translates to: DEASAFWEKRSKATHDRSRRDSE*SGEPYA
Trigger: AGCATAGGGCTCCCCACTTCATTCACTGTCTCTCCT...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp GGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACGCTGTCTCATGGGTTTaGACATGGCCTTCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: GLDEASAFWEKRSKATHDAVSWV*TWPSRN
Trigger: ATTTCGGGAAGGCCATGTTCAAACCCATGAGACAGC...GTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp CACATCGCTGAGTCTGTAGTCAGCTTGGGCCAGCAGCTGCAGGTGCAAAAGTGTGTCCAGATGGAAAGCTaGGATCTCAGCATTGTGTCT +
Preference number: 4 (lower is better)
Translates to: HIAESVVSLGQQLQVQKCVQMES*DLSIVS
Trigger: AGACACAATGCTGAGATCGCAGCTTTCCATCTGGAC...ACACTTTTGCACCTGCAGCTGCTGGCCCAAGCTGACTACAGACTCAGCGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000590873.5
CDS-3UTR GCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGTCGACTATGACACTCTaGTGTCCATGGGCCACTATG +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVSTMTL*CPWATM
Trigger: CATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGA...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAGTCCATGGGCCCCACTTaGTGTTTGAGAAAATGTCCT +
Preference number: 4 (lower is better)
Translates to: LESTALAPGVFSETGLCQSMGPT*CLRKCP
Trigger: AGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGA...CTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGTGTAGCGTTGGTGAGTaGCTCACCTGGTCAGATCTC +
Preference number: 4 (lower is better)
Translates to: EIVGGLDEASAFWEKRSKCSVGE*LTWSDL
Trigger: GAGATCTGACCAGGTGAGGCACTCACCAACGCTACA...CTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCTGGAAACCTGTGTGTTaGTTCTGTAGCGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSAWKPVC*FCSVGE
Trigger: CTCACCAACGCTACAGAAGCAACACACAGGTTTCCA...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCAAGTGGGGAGCCCTATaGTGCAGTAGGGCCACAACA +
Preference number: 4 (lower is better)
Translates to: PTCCLRKCPASFLADLTPKWGAL*CSRATT
Trigger: TGTTGTGGCCCTACTGCAGCATAGGGCTCCCCACTT...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCTTGACCTTAACTTGGGGACCAGGTaGACGGAGCACCGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AIFAHTAESLETFLVLDLNLGTR*TEHRGS
Trigger: AGAGCCCCGGTGCTCCGTGCACCTGGTCCCCAAGTT...AAGGTCAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp GAGTCTGTAGTCAGCTTGGGCCAGCAGCTGCAGGTGCAAAAGTGTTTTCTTTTTGTTCGGGAAAAGTTGTaGACGATCGTGCCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ESVVSLGQQLQVQKCFLFVREKL*TIVPGS
Trigger: GGACCCCGGCACGATCGTGCACAACTTTTCCCGAAC...AAAAAGAAAACACTTTTGCACCTGCAGCTGCTGGCCCAAGCTGACTACAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp TACTCCGTCTTGCACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCTCTTGGAAAACAGAGTTaGAAGGAGGCCTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: YSVLHMYGHLAKKHTLLALGKQS*KEASGV
Trigger: GACCCCTGAGGCCTCCTTGCAACTCTGTTTTCCAAG...AGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp GGAGAGAGGCGAGAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGCACACGTTGCTCGCTaGAGAGACAAAGAAAACACT +
Preference number: 4 (lower is better)
Translates to: GERREDGDFIMGVSSEPSAHVAR*RDKENT
Trigger: AGTGTTTTCTTTGTCTCTCCAGCGAGCAACGTGTGC...AGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTCTCGCCTCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp GGAGAGAGGCGAGAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTATGGAGATTTCATCATaGGAGTGTCGTCCGAACCCT +
Preference number: 4 (lower is better)
Translates to: GERREDGDFIMGVSSEPSMEISS*ECRPNP
Trigger: AGGGTTCGGACGACACTCCCATGATGAAATCTCCAT...AGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTCTCGCCTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000590873.5
CDS-3UTR CCA 90 bp TCGACTATGACACTCTGCTGTCCATGGGCCACTATGCACCCCTCCACTGTCCTTAGAGAGGCGAGAGGATaGAGATTTCATCATGGGAGT +
Preference number: 4 (lower is better)
Translates to: STMTLCCPWATMHPSTVLREARG*RFHHGS
Trigger: ACTCCCATGATGAAATCTCCATCCTCTCGCCTCTCT...AAGGACAGTGGAGGGGTGCATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR CCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGTTTATCATGCAGCACTaGGAGAGAGGCGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVFIMQH*ERGERM
Trigger: CATCCTCTCGCCTCTCTCCCAGTGCTGCATGATAAA...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGAGGACAGGGCTGAGCTaGTCTTCCAGCAGTGATTCT +
Preference number: 4 (lower is better)
Translates to: EIVGGLDEASAFWEKRSKRTGLS*SSSSDS
Trigger: AGAATCACTGCTGGAAGACCAGCTCAGCCCTGTCCT...CTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGTCCTTAGGATGGTTTaGAGCCTTCGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: DEASAFWEKRSKATHDRSVLRMV*SLRSRA
Trigger: TGCCCTGGATCGAAGGCTCCAAACCATCCTAAGGAC...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp AGTACTCTCCTGGGATCAAGGCTGCCAAGCCTGACCTATACCCAGATTTCCCAGCCACTGTCCTTAGGATaGTTTGGAGCCTTCGATCCA +
Preference number: 4 (lower is better)
Translates to: STLLGSRLPSLTYTQISQPLSLG*FGAFDP
Trigger: TGGATCGAAGGCTCCAAACCATCCTAAGGACAGTGG...CTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTGATCCCAGGAGAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp AGTGTGAGGTCTAATTTGAACCTGTCAGAGTTACTGTTGCCTGCGCTGGCCCAATCATGTTACCCAGGCTaGTCTCGAGCTCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: SVRSNLNLSELLLPALAQSCYPG*SRAPET
Trigger: GGTCTCAGGAGCTCGAGACCAGCCTGGGTAACATGA...TTGGGCCAGCGCAGGCAACAGTAACTCTGACAGGTTCAAATTAGACCTCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp CTCAGCATTGTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCCACTGGTGTCTCAGAGGGCCTGCAACTTaGAGCTCGACCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSIVSLKVNEVEEVHWCLRGPAT*SSTRCG
Trigger: GCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCT...GAGACACCAGTGGACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp AGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCCTAGGATTTCCTTGGTaGCATTTACTATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SQCFLGKTEQGNARQKRCLGFPW*HLLSSP
Trigger: TGGGGAGGATAGTAAATGTCACCAAGGAAATCCTAG...GCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR TCA 90 bp CACATCGCTGAGTCTGTAGTCAGCTTGGGCCAGCAGCTGCAGGTGCAAAAGTGTGGATTTCATTCTTGGTaGCCTCTAGGATTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HIAESVVSLGQQLQVQKCGFHSW*PLGFPW
Trigger: CCAAGGAAATCCTAGAGGTCACCAAGAATGAAATCC...ACACTTTTGCACCTGCAGCTGCTGGCCCAAGCTGACTACAGACTCAGCGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR TCA 90 bp TCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAACTTGGTGAACATCTCGCATCACATCGCTaGGTCTGTAGTCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SGVVKVNKEPIIPELGEHLASHR*VCSQLG
Trigger: CCCAAGCTGACTACAGACTCAGCGATGTGATGCGAG...ATGTTCACCAAGTTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000590873.5
CDS-3UTR TCA 90 bp AGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGGCCCCACTTGCTGTTTaGGAAAATGTCCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RSSVALMKPVLFGKNGARAPLAV*ENVLLP
Trigger: AGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGC...CCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp CAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCCAAGGCTGCCAAGCCTaGCCTATACCCAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: QSRLSLLTLQKAWRHFWFQGCQA*PIPRFP
Trigger: GGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTG...GAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp CTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAGTGTAGCCTGCTTTCCTaGGAGTCTTATTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LESTALAPGVFSETGLCQCSLLS*ESYLEV
Trigger: GACTTCCAAATAAGACTCTCAGGAAAGCAGGCTACA...CTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp CCCTCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAACTTGGTGAAGCTGTCTCATGGGTTTaGACATGGCCTTCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: PSGVVKVNKEPIIPELGEAVSWV*TWPSRN
Trigger: ATTTCGGGAAGGCCATGTTCAAACCCATGAGACAGC...TTCACCAAGTTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp TCGTCCGAACCCTCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAACAGCATACTCCGTCTTaGACATGTATGGACACTTGG +
Preference number: 4 (lower is better)
Translates to: SSEPSGVVKVNKEPIIPEQHTPS*TCMDTW
Trigger: CCAAGTGTCCATACATGTGCAAGACGGAGTATGCTG...TTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGAGGGTTCGGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp ACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCTGGAGAGACAAAGAGCTTGGGCCAGCAGCTaGAGGTGCAAAAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: TCMDTWRRSTRCSLERQRAWASS*RCKSVF
Trigger: GAAAACACTTTTGCACCTGCAGCTGCTGGCCCAAGC...TCTTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTTCCATGGGCCCCACTTaGTGTTTGAGAAAATGTCCT +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLASMGPT*CLRKCP
Trigger: AGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGA...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp TGGGGTCTTAGGGAAGAAGATTGTGGTTGGTGGGCTGTAGTCAGCCTTGGCTCTTCCATGGGCCCCACTTaGTGTTTGAGAAAATGTCCT +
Preference number: 4 (lower is better)
Translates to: WGLREEDCGWWAVVSLGSSMGPT*CLRKCP
Trigger: AGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGA...AGAGCCAAGGCTGACTACAGCCCACCAACCACAATCTTCTTCCCTAAGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp TGGGGTCTTAGGGAAGAAGATTGTGGTTGGTGGGCTGTAGTCAGCCTTGGCTCTTGCGCTGGCCCAAAGTaGAGATTTTTAGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WGLREEDCGWWAVVSLGSCAGPK*RFLVSL
Trigger: CAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCA...AGAGCCAAGGCTGACTACAGCCCACCAACCACAATCTTCTTCCCTAAGACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTCCTTGGCTCTTTTCCTaGCTTACTCCAGGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: FPSALRRSSVALMKPVLFPWLFS*LTPGLC
Trigger: ACACAAGCCTGGAGTAAGGCAGGAAAAGAGCCAAGG...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCCCTTGGCTCTTTTCCTaGCTTACTCCAGGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: DEASAFWEKRSKATHDRSPWLFS*LTPGLC
Trigger: ACACAAGCCTGGAGTAAGGCAGGAAAAGAGCCAAGG...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAGAGTCGAGGCTATCTTTaGTCACACTGCAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LESTALAPGVFSETGLCQSRGYL*SHCRKL
Trigger: AAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACT...CTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp AGTACTCTCCTGGGATCAAGGCTGCCAAGCCTGACCTATACCCAGATTTCCCAGTGGAAACCTGTGTGTTaGTTCTGTAGCGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: STLLGSRLPSLTYTQISQWKPVC*FCSVGE
Trigger: CTCACCAACGCTACAGAAGCAACACACAGGTTTCCA...CTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTGATCCCAGGAGAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAGGGTAGAGCTGTAGCCTaGTTTCCTGAGAGTCTTATT +
Preference number: 4 (lower is better)
Translates to: LESTALAPGVFSETGLCQGRAVA*FPESLI
Trigger: AATAAGACTCTCAGGAAAGCAGGCTACAGCTCTACC...CTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGCGGGGAGCTTGTCTGTaGGCCTGGACTCCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFERGACL*AWTPRG
Trigger: GCCTCTAGGAGTCCAGGCGCACAGACAAGCTCCCCG...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp GAAAGCTGCGATCTCAGCATTGTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCAGTTGTGCACGATCGTaGCGGGGTCCGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ESCDLSIVSLKVNEVEEVSCARS*RGPRQL
Trigger: CAGCTGCCTCGGACCCCGGCACGATCGTGCACAACT...GACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAGATCGCAGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp TCGTCCGAACCCTCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAAAGAATCCTGTCCAGATaGAAAGCTGCGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSEPSGVVKVNKEPIIPERILSR*KAAISA
Trigger: TGCTGAGATCGCAGCTTTCCATCTGGACAGGATTCT...TTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGAGGGTTCGGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp GTGGGTTGCCACAGACAGCATACTCCGTCTTGCACATGTATGGACACTTGGCGACGTCTTGCACATGTATaGACACTTGGCGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VGCHRQHTPSCTCMDTWRRLAHV*TLGEEA
Trigger: TGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACG...TCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp CAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCACCCTCCAGCAGGTGTaGGTTGCCACAGACAGCATA +
Preference number: 4 (lower is better)
Translates to: QSRLSLLTLQKAWRHFWFTLQQV*VATDSI
Trigger: TATGCTGTCTGTGGCAACCCACACCTGCTGGAGGGT...GAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCAGGACAGGGCTGAGCTaGTCTTCCAGCAGTGATTCT +
Preference number: 4 (lower is better)
Translates to: PTCCLRKCPASFLADLTPRTGLS*SSSSDS
Trigger: AGAATCACTGCTGGAAGACCAGCTCAGCCCTGTCCT...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp AGTGTGAGGTCTAATTTGAACCTGTCAGAGTTACTGTTGCCTGCGCTGGCCCAAGTCCTTAGGATGGTTTaGAGCCTTCGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SVRSNLNLSELLLPALAQVLRMV*SLRSRA
Trigger: TGCCCTGGATCGAAGGCTCCAAACCATCCTAAGGAC...TTGGGCCAGCGCAGGCAACAGTAACTCTGACAGGTTCAAATTAGACCTCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGCCACTGTCCTTAGGATaGTTTGGAGCCTTCGATCCA +
Preference number: 4 (lower is better)
Translates to: EIVGGLDEASAFWEKRSKPLSLG*FGAFDP
Trigger: TGGATCGAAGGCTCCAAACCATCCTAAGGACAGTGG...CTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp ATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGCCACTGTCCTTAGGATaGTTTGGAGCCTTCGATCCA +
Preference number: 4 (lower is better)
Translates to: MKPVLFGKNGARQRTTEAPLSLG*FGAFDP
Trigger: TGGATCGAAGGCTCCAAACCATCCTAAGGACAGTGG...CGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCTCGAGTCGACTGCTCTaGCTCCAGGCGTATTTTCTG +
Preference number: 4 (lower is better)
Translates to: PTCCLRKCPASFLADLTPSSRLL*LQAYFL
Trigger: CAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGA...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGAAGCCAGTGCTTTTTaGGAAAAACGGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLAEASAF*EKRSKA
Trigger: TGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTTACTGTTGCCTGCGCTaGCCCAAAGTGCAGATTTTT +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLAYCCLR*PKVQIF
Trigger: AAAAATCTGCACTTTGGGCCAGCGCAGGCAACAGTA...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGAAGAAGATTGTGGTTaGTGGGCTGTAGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLAEEDCG*WAVVSL
Trigger: AAGGCTGACTACAGCCCACCAACCACAATCTTCTTC...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGGAAGAAGATTGTGGTTaGTGGGCTGTAGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVEEDCG*WAVVSL
Trigger: AAGGCTGACTACAGCCCACCAACCACAATCTTCTTC...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAAGCATACCAGTCATGTaGGGGTACCACGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: FSSMGPTCCLRKCPASFLSIPVM*GYHGVR
Trigger: TCTGACCCCGTGGTACCCCCACATGACTGGTATGCT...TAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp CTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAGTTCTTCCATGCACATTaGAGGATGGGGGTTGTATCT +
Preference number: 4 (lower is better)
Translates to: LESTALAPGVFSETGLCQFFHAH*RMGVVS
Trigger: AGATACAACCCCCATCCTCCAATGTGCATGGAAGAA...CTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAATCATGTTACCCAGGCTaGTCTCGAGCTCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: VHQGVKIQFHGPHLLFEKSCYPG*SRAPET
Trigger: GGTCTCAGGAGCTCGAGACCAGCCTGGGTAACATGA...TTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTCTGTGTGTGATCTCCTaGTTCTTCATCCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: EASAFWEKRSKATHDRSGLCVIS*FFIHRE
Trigger: TTCCCTGTGGATGAAGAACCAGGAGATCACACACAG...ACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR CAA 72 bp AGATTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTaGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCA +
Preference number: 4 (lower is better)
Translates to: RFPSALRRSSVA*MKPVLFGKNGA
Trigger: TGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
3UTR CAA 72 bp AGTCATGTGGGGGTACCACGGGGTCAGAAGTGTTATTaGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGA +
Preference number: 4 (lower is better)
Translates to: SHVGVPRGQKCY*SSRGYLCSHCR
Trigger: TCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCCGTGGTACCCCCACATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGGGATTTCATTCTTGGTaGCCTCTAGGATTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVGFHSW*PLGFPW
Trigger: CCAAGGAAATCCTAGAGGTCACCAAGAATGAAATCC...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR TCA 90 bp AGTGTGAGGTCTAATTTGAACCTGTCAGAGTTACTGTTGCCTGCGCTGGCCCAACTGGCGTTGTCAAGGTaGATAAGGAACCCATCATCC +
Preference number: 4 (lower is better)
Translates to: SVRSNLNLSELLLPALAQLALSR*IRNPSS
Trigger: GGATGATGGGTTCCTTATTCACCTTGACAACGCCAG...TTGGGCCAGCGCAGGCAACAGTAACTCTGACAGGTTCAAATTAGACCTCACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCGCCCCACTTGCTGTTTaGGAAAATGTCCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PTCCLRKCPASFLADLTPAPLAV*ENVLLP
Trigger: AGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGC...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGGTTGTATCTGTGTTTaGGAGGATTGGAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLAGCICV*EDWKPV
Trigger: CACAGGTTTCCAATCCTCTCAAACACAGATACAACC...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp ATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGGAGAGACAGTGAATaGAGTGGGGAGCCCTATGCT +
Preference number: 4 (lower is better)
Translates to: IQFHGPHLLFEKMSCFLPRRDSE*SGEPYA
Trigger: AGCATAGGGCTCCCCACTTCATTCACTGTCTCTCCT...AGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp GTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAATGTAGCCTGCTTTCCTaGGAGTCTTATTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: VLFGKNGARQRTTEAVHQCSLLS*ESYLEV
Trigger: GACTTCCAAATAAGACTCTCAGGAAAGCAGGCTACA...TTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CACATCGCTGAGTCTGTAGTCAGCTTGGGCCAGCAGCTGCAGGTGCAAAAGTGTAAGTGCCTCATGTCTTaGAGAAGTTTGCTGACAACA +
Preference number: 4 (lower is better)
Translates to: HIAESVVSLGQQLQVQKCKCLMS*RSLLTT
Trigger: TGTTGTCAGCAAACTTCTGCAAGACATGAGGCACTT...ACACTTTTGCACCTGCAGCTGCTGGCCCAAGCTGACTACAGACTCAGCGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGTCCAGATGGAAAGCTaGGATCTCAGCATTGTGTCT +
Preference number: 4 (lower is better)
Translates to: DEASAFWEKRSKATHDRSVQMES*DLSIVS
Trigger: AGACACAATGCTGAGATCGCAGCTTTCCATCTGGAC...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000590873.5
ENST00000592554.2
CDS-3UTR GCA 90 bp GAGTCTGTAGTCAGCTTGGGCCAGCAGCTGCAGGTGCAAAAGTGTTTTCTTTTTGCTTGGGCCAGCAGCTaGAGGTGCAAAAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: ESVVSLGQQLQVQKCFLFAWASS*RCKSVF
Trigger: GAAAACACTTTTGCACCTGCAGCTGCTGGCCCAAGC...AAAAAGAAAACACTTTTGCACCTGCAGCTGCTGGCCCAAGCTGACTACAGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000590873.5
CDS-3UTR GCA 90 bp CAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCGTCCATGGGCCACTATaGACCCCTCCACTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: QGVKIQFHGPHLLFEKMSVHGPL*TPPLSL
Trigger: TAAGGACAGTGGAGGGGTGCATAGTGGCCCATGGAC...GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGTCTGAAACTGGACTCTaGCAGCCCTTAGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: EIVGGLDEASAFWEKRSKSETGL*QPLACQ
Trigger: TTGACAAGCTAAGGGCTGGCAGAGTCCAGTTTCAGA...CTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp AGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGTGCGCTGGCCCAAAGTaGAGATTTTTAGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RSSVALMKPVLFGKNGARCAGPK*RFLVSL
Trigger: CAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCA...CCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAAGAGTTACTGTTGCCTaGGCTGGCCCAAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VHQGVKIQFHGPHLLFEKRVTVA*AGPKCR
Trigger: TCTGCACTTTGGGCCAGCGCAGGCAACAGTAACTCT...TTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAATGTAGCGTTGGTGAGTaGCTCACCTGGTCAGATCTC +
Preference number: 4 (lower is better)
Translates to: VHQGVKIQFHGPHLLFEKCSVGE*LTWSDL
Trigger: GAGATCTGACCAGGTGAGGCACTCACCAACGCTACA...TTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGTGTTTAGGCCCAAAGTaGTGGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: EIVGGLDEASAFWEKRSKCLGPK*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCACTTTGGGCCTAAACA...CTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGGGTAGAGCTGTAGCCTaGTTTCCTGAGAGTCTTATT +
Preference number: 4 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVGRAVA*FPESLI
Trigger: AATAAGACTCTCAGGAAAGCAGGCTACAGCTCTACC...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTCGTCTTGCACATGTATaGACACTTGGCGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FPSALRRSSVALMKPVLFRLAHV*TLGEEA
Trigger: TGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACG...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGATGGAGATTTCATCATaGGAGTGTCGTCCGAACCCT +
Preference number: 4 (lower is better)
Translates to: EIVGGLDEASAFWEKRSKMEISS*ECRPNP
Trigger: AGGGTTCGGACGACACTCCCATGATGAAATCTCCAT...CTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GCATACTCCGTCTTGCACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCAGAGAGGCGAGAGGATaGAGATTTCATCATGGGAGT +
Preference number: 4 (lower is better)
Translates to: AYSVLHMYGHLAKKHTLLREARG*RFHHGS
Trigger: ACTCCCATGATGAAATCTCCATCCTCTCGCCTCTCT...GAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp GTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCGGCCAACTGTTCCACTaGGCCGTCGACTATGACACT +
Preference number: 4 (lower is better)
Translates to: VRSVICPVEAIFAHTAESGQLFH*AVDYDT
Trigger: AGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCC...GCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGATGCACATTGGAGGATaGGGGTTGTATCTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVMHIGG*GLYLCL
Trigger: CAAACACAGATACAACCCCCATCCTCCAATGTGCAT...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp ATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGTATTCCCTGTCCAGATaGAAAGCTGCGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: MKPVLFGKNGARQRTTEAYSLSR*KAAISA
Trigger: TGCTGAGATCGCAGCTTTCCATCTGGACAGGGAATA...CGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590873.5
3UTR CAA 72 bp GAGAGGATTGGAAACCTGTGTGTTGCTTCTGTAGCGTaGGTGAGTGCCTCACCTGGTCAGATCTCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: ERIGNLCVASVA*VSASPGQISVN
Trigger: ATTCACTGAGATCTGACCAGGTGAGGCACTCACCAACGCTACAGAAGCAACACACAGGTTTCCAATCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp ATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTCATCCCCGAACTTGGTaGACATCTCATAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: IQFHGPHLLFEKMSCFLPHPRTW*TSHNGA
Trigger: GGCACCATTATGAGATGTTCACCAAGTTCGGGGATG...AGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AAAAGGAGTTTCAGATATCAACAAGTCAGGGAGAAGGTAGAGGAGACAAGGAATAGTAACAGGTGGGAGTaGGGACGCAGGGTCGGCACT +
Preference number: 4 (lower is better)
Translates to: KRSFRYQQVREKVEETRNSNRWE*GRRVGT
Trigger: AGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACT...ATTCCTTGTCTCCTCTACCTTCTCCCTGACTTGTTGATATCTGAAACTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTAGTCACTCCATGGAATaGAGACCTTACTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FPSALRRSSVALMKPVLFSHSME*RPYCPL
Trigger: CAAAGGACAGTAAGGTCTTCATTCCATGGAGTGACT...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp GATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCAGTCACTCCATGGAATaGAGACCTTACTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: DEASAFWEKRSKATHDRSSHSME*RPYCPL
Trigger: CAAAGGACAGTAAGGTCTTCATTCCATGGAGTGACT...GCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGTTTACTTTTGTTGACTaGCTAGTCACTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: WSRAPETKRSACLGPKCWFTFVD*LVTPWN
Trigger: ATTCCATGGAGTGACTAGTCAGTCAACAAAAGTAAA...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGCTGGTCAGATCTCAGTaGATGGTAGTGATTTTAGAG +
Preference number: 4 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVLVRSQ*MVVILE
Trigger: CTCTAAAATCACTACCATTCACTGAGATCTGACCAG...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp GAAAGCTGCGATCTCAGCATTGTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCTTCAAAAGCAGGAACTaGGGCCTGTTCCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: ESCDLSIVSLKVNEVEEVFKSRN*GLFQRA
Trigger: GGCCCGCTGGAACAGGCCTCAGTTCCTGCTTTTGAA...GACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAGATCGCAGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGAAGTGCCTCATGTCTTaGAGAAGTTTGCTGACAACA +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVKCLMS*RSLLTT
Trigger: TGTTGTCAGCAAACTTCTGCAAGACATGAGGCACTT...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp CAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGTCAGAGTTACTGTTaGCTGCGCTGGCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: QGVKIQFHGPHLLFEKMSCQSYC*LRWPKV
Trigger: CACTTTGGGCCAGCGCAGGCAACAGTAACTCTGACA...GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCTATCTTTGCTCACACTaGAGAAAGCTTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSAYLCSH*RKLGDI
Trigger: AATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATA...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GAGTCTGTAGTCAGCTTGGGCCAGCAGCTGCAGGTGCAAAAGTGTTTTCTTTTTGTAGAAGAAGTCCACTaGTGTCTCCTCATCTCGCTG +
Preference number: 4 (lower is better)
Translates to: ESVVSLGQQLQVQKCFLFVEEVH*CLLISL
Trigger: CAGCGAGATGAGGAGACACCAGTGGACTTCTTCTAC...AAAAAGAAAACACTTTTGCACCTGCAGCTGCTGGCCCAAGCTGACTACAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp ATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTGTAGAAGAAGTCCACTaGTGTCTCCTCATCTCGCTG +
Preference number: 4 (lower is better)
Translates to: IQFHGPHLLFEKMSCFLPVEEVH*CLLISL
Trigger: CAGCGAGATGAGGAGACACCAGTGGACTTCTTCTAC...AGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp AGTGTGAGGTCTAATTTGAACCTGTCAGAGTTACTGTTGCCTGCGCTGGCCCAAGCACACGTTGCTCGCTaGAGAGACAAAGAAAACACT +
Preference number: 4 (lower is better)
Translates to: SVRSNLNLSELLLPALAQAHVAR*RDKENT
Trigger: AGTGTTTTCTTTGTCTCTCCAGCGAGCAACGTGTGC...TTGGGCCAGCGCAGGCAACAGTAACTCTGACAGGTTCAAATTAGACCTCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCAGAGAGGCGAGAGGATaGAGATTTCATCATGGGAGT +
Preference number: 4 (lower is better)
Translates to: PTCCLRKCPASFLADLTPREARG*RFHHGS
Trigger: ACTCCCATGATGAAATCTCCATCCTCTCGCCTCTCT...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GCCAAGCCTGACCTATACCCAGATTTCCCAGTGCACTCAGGAGATCGTCGGTGGACAGTATTTGAACTCTaGCCTTTACTGGAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: AKPDLYPDFPVHSGDRRWTVFEL*PLLEKL
Trigger: CAACTTTTCCAGTAAAGGCCAGAGTTCAAATACTGT...CCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGGCTTGGAGACATTTCTaGTTCTTGACCTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVAWRHF*FLTLYS
Trigger: AGAGTACAAGGTCAAGAACCAGAAATGTCTCCAAGC...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp CAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCGGTGAGTGCCTCACCTaGTCAGATCTCAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: QGVKIQFHGPHLLFEKMSGECLT*SDLSEW
Trigger: CCATTCACTGAGATCTGACCAGGTGAGGCACTCACC...GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTTGGGTGGGATACTGTTaGGTTTTGTGTTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLAWVGYC*VLCYSE
Trigger: TTCACTGTAACACAAAACCCAACAGTATCCCACCCA...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTTGGGTGGGATACTGTTaGGTTTTGTGTTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: EASAFWEKRSKATHDRSGWVGYC*VLCYSE
Trigger: TTCACTGTAACACAAAACCCAACAGTATCCCACCCA...ACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GCCAAGCCTGACCTATACCCAGATTTCCCAGTGCACTCAGGAGATCGTCGGTGGTTTGACTTCATAAATTaGGTGGGATACTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: AKPDLYPDFPVHSGDRRWFDFIN*VGYCWV
Trigger: AACCCAACAGTATCCCACCCAATTTATGAAGTCAAA...CCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp CTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAGGTGTATATAGGCCATTaGAAAACCAGTCCTTCGTTA +
Preference number: 4 (lower is better)
Translates to: LESTALAPGVFSETGLCQVYIGH*KTSPSL
Trigger: TAACGAAGGACTGGTTTTCCAATGGCCTATATACAC...CTGGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp CAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCCATCCCCGAACTTGGTaGACATCTCATAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: QGVKIQFHGPHLLFEKMSHPRTW*TSHNGA
Trigger: GGCACCATTATGAGATGTTCACCAAGTTCGGGGATG...GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp TTACTCTCTCTGAGATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTCTCGCATCACATCGCTaGGTCTGTAGTCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LLSLRFKVLPCTLEDGGCLASHR*VCSQLG
Trigger: CCCAAGCTGACTACAGACTCAGCGATGTGATGCGAG...ACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATCTCAGAGAGAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AGTGTGAGGTCTAATTTGAACCTGTCAGAGTTACTGTTGCCTGCGCTGGCCCAAGGTTGTATCTGTGTTTaGGAGGATTGGAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: SVRSNLNLSELLLPALAQGCICV*EDWKPV
Trigger: CACAGGTTTCCAATCCTCTCAAACACAGATACAACC...TTGGGCCAGCGCAGGCAACAGTAACTCTGACAGGTTCAAATTAGACCTCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp AGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGGAGGTAAGGTTCATCTaGTCTCTGTACATCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RSSVALMKPVLFGKNGAREVRFI*SLYILC
Trigger: ACACAAGATGTACAGAGAGCAGATGAACCTTACCTC...CCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp TCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAACTTGGTGAACATACATGTATGGACACTTaGCGAAGAAGCACACGTTGC +
Preference number: 4 (lower is better)
Translates to: SGVVKVNKEPIIPELGEHTCMDT*RRSTRC
Trigger: GCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGT...ATGTTCACCAAGTTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp CAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCCTGTGTGTGATCTCCTaGTTCTTCATCCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: QSRLSLLTLQKAWRHFWFLCVIS*FFIHRE
Trigger: TTCCCTGTGGATGAAGAACCAGGAGATCACACACAG...GAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGCCTGAGAGTCTTATTTaGAAGTCCCAAACCATTTTG +
Preference number: 4 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVPESLI*KSQTIL
Trigger: CAAAATGGTTTGGGACTTCCAAATAAGACTCTCAGG...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AAAAGGAGTTTCAGATATCAACAAGTCAGGGAGAAGGTAGAGGAGACAAGGAATCTCGCATCACATCGCTaGGTCTGTAGTCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: KRSFRYQQVREKVEETRNLASHR*VCSQLG
Trigger: CCCAAGCTGACTACAGACTCAGCGATGTGATGCGAG...ATTCCTTGTCTCCTCTACCTTCTCCCTGACTTGTTGATATCTGAAACTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp GGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACCATTTTTACTTTTGTTaGCTGACTAGTCACTCCATG +
Preference number: 4 (lower is better)
Translates to: GLDEASAFWEKRSKATHDHFYFC*LTSHSM
Trigger: CATGGAGTGACTAGTCAGTCAACAAAAGTAAAAATG...GTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp TGGGGTCTTAGGGAAGAAGATTGTGGTTGGTGGGCTGTAGTCAGCCTTGGCTCTTACCACATATCATGGTaGAATTCAAGCCTATTGCTT +
Preference number: 4 (lower is better)
Translates to: WGLREEDCGWWAVVSLGSYHISW*NSSLLL
Trigger: AAGCAATAGGCTTGAATTTCACCATGATATGTGGTA...AGAGCCAAGGCTGACTACAGCCCACCAACCACAATCTTCTTCCCTAAGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGTACCACATATCATGGTaGAATTCAAGCCTATTGCTT +
Preference number: 4 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVYHISW*NSSLLL
Trigger: AAGCAATAGGCTTGAATTTCACCATGATATGTGGTA...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp CAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCCAGCATACTCCGTCTTaGACATGTATGGACACTTGG +
Preference number: 4 (lower is better)
Translates to: QGVKIQFHGPHLLFEKMSQHTPS*TCMDTW
Trigger: CCAAGTGTCCATACATGTGCAAGACGGAGTATGCTG...GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp CAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTCTGAAACTGGACTCTaGCAGCCCTTAGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: QGVKIQFHGPHLLFEKMSSETGL*QPLACQ
Trigger: TTGACAAGCTAAGGGCTGGCAGAGTCCAGTTTCAGA...GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCAGAGAGGCGAGAGGATaGAGATTTCATCATGGGAGT +
Preference number: 4 (lower is better)
Translates to: VRSVICPVEAIFAHTAESREARG*RFHHGS
Trigger: ACTCCCATGATGAAATCTCCATCCTCTCGCCTCTCT...GCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp CAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCGAAGCCAGTGCTTTTTaGGAAAAACGGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QGVKIQFHGPHLLFEKMSEASAF*EKRSKA
Trigger: TGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC...GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGGAAGATTGTGGTTGGTaGGCTGTAGTCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFEEDCGW*AVVSLG
Trigger: GCCAAGGCTGACTACAGCCCACCAACCACAATCTTC...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGCCTGAGAGTCTTATTTaGAAGTCCCAAACCATTTTG +
Preference number: 4 (lower is better)
Translates to: EIVGGLDEASAFWEKRSKPESLI*KSQTIL
Trigger: CAAAATGGTTTGGGACTTCCAAATAAGACTCTCAGG...CTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR CAA 72 bp GGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTaGCTCACACTGCAGAAAGCTTGGAGACATTTCTGG +
Preference number: 4 (lower is better)
Translates to: GSEVLFVQSRLS*LTLQKAWRHFW
Trigger: CCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp ATTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTCTGGTCAGATCTCAGTaGATGGTAGTGATTTTAGAG +
Preference number: 4 (lower is better)
Translates to: IQFHGPHLLFEKMSCFLPLVRSQ*MVVILE
Trigger: CTCTAAAATCACTACCATTCACTGAGATCTGACCAG...AGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp CTCAGCATTGTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCCACTGGTGTCTCCATTTGCAGAAACTGTaGAGCACCTCCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSIVSLKVNEVEEVHWCLHLQKL*STSQKF
Trigger: GAACTTCTGGGAGGTGCTTCACAGTTTCTGCAAATG...GAGACACCAGTGGACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp TCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAACTTGGTGAACATGAGGTAAGGTTCATCTaGTCTCTGTACATCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SGVVKVNKEPIIPELGEHEVRFI*SLYILC
Trigger: ACACAAGATGTACAGAGAGCAGATGAACCTTACCTC...ATGTTCACCAAGTTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp GAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGACAAAGAAAACACTCTaGAGGATTTCATTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EIVGGLDEASAFWEKRSKTKKTL*RISFLV
Trigger: CACCAAGAATGAAATCCTGCAGAGTGTTTTCTTTGT...CTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGCGAAGAAGCACACGTTaGTCGCTGGAGAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFERRSTR*SLERQR
Trigger: TCTTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCG...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR GCA 90 bp AAAAGGAGTTTCAGATATCAACAAGTCAGGGAGAAGGTAGAGGAGACAAGGAATGCTTGGGCCAGCAGCTaGAGGTGCAAAAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: KRSFRYQQVREKVEETRNAWASS*RCKSVF
Trigger: GAAAACACTTTTGCACCTGCAGCTGCTGGCCCAAGC...ATTCCTTGTCTCCTCTACCTTCTCCCTGACTTGTTGATATCTGAAACTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp TTACTCTCTCTGAGATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTTCGACTATGACACTCTaGTGTCCATGGGCCACTATG +
Preference number: 4 (lower is better)
Translates to: LLSLRFKVLPCTLEDGGCSTMTL*CPWATM
Trigger: CATAGTGGCCCATGGACAGCAGAGTGTCATAGTCGA...ACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATCTCAGAGAGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCTTGACCTTTCTGAAACTGGACTCTaGCAGCCCTTAGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: AIFAHTAESLETFLVLDLSETGL*QPLACQ
Trigger: TTGACAAGCTAAGGGCTGGCAGAGTCCAGTTTCAGA...AAGGTCAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCAGTCGAGGCTATCTTTaGTCACACTGCAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VRSVICPVEAIFAHTAESSRGYL*SHCRKL
Trigger: AAGCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACT...GCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp TCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCGTCTTGCACATGTATGGAATTCAATCAATCATTTaGAGAAACTGTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: SSRCGLPQTAYSVLHMYGIQSII*RNCEAP
Trigger: AGGTGCTTCACAGTTTCTGCAAATGATTGATTGAAT...TCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CCA 90 bp GCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCTTGACCTTAGAATCCTGTCCAGATaGAAAGCTGCGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AIFAHTAESLETFLVLDLRILSR*KAAISA
Trigger: TGCTGAGATCGCAGCTTTCCATCTGGACAGGATTCT...AAGGTCAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CCA 90 bp GCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCTTGACCTTTACTGTTGCCTGCGCTaGCCCAAAGTGCAGATTTTT +
Preference number: 4 (lower is better)
Translates to: AIFAHTAESLETFLVLDLYCCLR*PKVQIF
Trigger: AAAAATCTGCACTTTGGGCCAGCGCAGGCAACAGTA...AAGGTCAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GGGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAACACTGCAGAAAGCTTaGAGACATTTCTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GVRSVICPVEAIFAHTAETLQKA*RHFWFL
Trigger: CAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGT...TTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCATGCACATTGGAGGATaGGGGTTGTATCTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VRSVICPVEAIFAHTAESMHIGG*GLYLCL
Trigger: CAAACACAGATACAACCCCCATCCTCCAATGTGCAT...GCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTTTTGACTTCATAAATTaGGTGGGATACTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: FPSALRRSSVALMKPVLFFDFIN*VGYCWV
Trigger: AACCCAACAGTATCCCACCCAATTTATGAAGTCAAA...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp GGGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAACCAGGAGTTATCTTTaGCTTGTAGCTAGAATAAGG +
Preference number: 4 (lower is better)
Translates to: GVRSVICPVEAIFAHTAETRSYL*LVARIR
Trigger: CCTTATTCTAGCTACAAGTCAAAGATAACTCCTGGT...TTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AGTGTGAGGTCTAATTTGAACCTGTCAGAGTTACTGTTGCCTGCGCTGGCCCAATTTACTTTTGTTGACTaGCTAGTCACTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: SVRSNLNLSELLLPALAQFTFVD*LVTPWN
Trigger: ATTCCATGGAGTGACTAGTCAGTCAACAAAAGTAAA...TTGGGCCAGCGCAGGCAACAGTAACTCTGACAGGTTCAAATTAGACCTCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR TCA 90 bp AAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAAGGAGTAAAGATTCATTTTTACTTTTGTTaGCTGACTAGTCACTCCATG +
Preference number: 4 (lower is better)
Translates to: KNGARQRTTEAVHQGVKIHFYFC*LTSHSM
Trigger: CATGGAGTGACTAGTCAGTCAACAAAAGTAAAAATG...AATCTTTACTCCTTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp TTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTATATCTTTGCTCACACTaGAGAAAGCTTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: FSSMGPTCCLRKCPASFLYLCSH*RKLGDI
Trigger: AATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATA...TAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp GTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAAGCTTTAAAGTTCTTCCATaGACATTGGAGGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: VRSVICPVEAIFAHTAESFKVLP*TLEDGG
Trigger: ACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAA...GCTTTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR GCA 90 bp TTACTCTCTCTGAGATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTTGTTTAGGCCCAAAGTaGTGGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LLSLRFKVLPCTLEDGGCCLGPK*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCACTTTGGGCCTAAACA...ACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATCTCAGAGAGAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCACAGTATTTGAACTCTaGCCTTTACTGGAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PTCCLRKCPASFLADLTPTVFEL*PLLEKL
Trigger: CAACTTTTCCAGTAAAGGCCAGAGTTCAAATACTGT...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp TTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGTGTATATAGGCCATTaGAAAACCAGTCCTTCGTTA +
Preference number: 4 (lower is better)
Translates to: FSSMGPTCCLRKCPASFLVYIGH*KTSPSL
Trigger: TAACGAAGGACTGGTTTTCCAATGGCCTATATACAC...TAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGTTCTTCCATGCACATTaGAGGATGGGGGTTGTATCT +
Preference number: 4 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFEFFHAH*RMGVVS
Trigger: AGATACAACCCCCATCCTCCAATGTGCATGGAAGAA...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp AGTGTGAGGTCTAATTTGAACCTGTCAGAGTTACTGTTGCCTGCGCTGGCCCAAGTGAAAAGAAGACTTTaGAATAGGTCTAAACCACTA +
Preference number: 4 (lower is better)
Translates to: SVRSNLNLSELLLPALAQVKRRL*NRSKPL
Trigger: TAGTGGTTTAGACCTATTCCAAAGTCTTCTTTTCAC...TTGGGCCAGCGCAGGCAACAGTAACTCTGACAGGTTCAAATTAGACCTCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CCA 90 bp AAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAAGGAGTAAAGATTGTGAAAAGAAGACTTTaGAATAGGTCTAAACCACTA +
Preference number: 4 (lower is better)
Translates to: KNGARQRTTEAVHQGVKIVKRRL*NRSKPL
Trigger: TAGTGGTTTAGACCTATTCCAAAGTCTTCTTTTCAC...AATCTTTACTCCTTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
3UTR CAA 72 bp GGAGAGACAAAGAAAACACTCTGCAGGATTTCATTCTaGGTGACCTCTAGGATTTCCTTGGTGACATTTACT +
Preference number: 4 (lower is better)
Translates to: GETKKTLCRISF*VTSRISLVTFT
Trigger: AGTAAATGTCACCAAGGAAATCCTAGAGGTCACCAAGAATGAAATCCTGCAGAGTGTTTTCTTTGTCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR GCA 90 bp CTCAGCATTGTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCCACTGGTGTCTCACAAAGAAAACACTCTaGAGGATTTCATTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LSIVSLKVNEVEEVHWCLTKKTL*RISFLV
Trigger: CACCAAGAATGAAATCCTGCAGAGTGTTTTCTTTGT...GAGACACCAGTGGACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS TCA 90 bp AGGGCGGACGGAGGCCGCCGGCTGCAAAGCCCGGGGCGTCTCTCCTaGGGATGCTGTCGCTCGGCGGCGGCTGCTAGTGCTCCCGCGACT +
Preference number: 5 (lower is better)
Translates to: RADGGRRLQSPGRLS*GCCRSAAAASAPAT
Trigger: AGTCGCGGGAGCACTAGCAGCCGCCGCCGAGCGACAGCATCCTCAGGAGAGACGCCCCGGGCTTTGCAGCCGGCGGCCTCCGTCCGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS CCA 90 bp AGACGCCAGTGCCGGCGGCTGGCACGGGCGGCGCGAGTGGGGAGTTaGCGAAGCAGGAGCGGCTCCGGGGAGCTTGTCTGTGCGCCTGGA +
Preference number: 5 (lower is better)
Translates to: RRQCRRLARAARVGS*RSRSGSGELVCAPG
Trigger: TCCAGGCGCACAGACAAGCTCCCCGGAGCCGCTCCTGCTTCGCCAACTCCCCACTCGCGCCGCCCGTGCCAGCCGCCGGCACTGGCGTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS GCA 90 bp GGCGGCTCCTCCGGGACGTTGTACAGCGGGTGGGCGAAGAGGGCCTaGAACTTGGAGCTCGACCCGCTGTGGCTGCCGCCAGCCGGTTCA +
Preference number: 5 (lower is better)
Translates to: GGSSGTLYSGWAKRA*NLELDPLWLPPAGS
Trigger: TGAACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTTCGCCCACCCGCTGTACAACGTCCCGGAGGAGCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS CCA 90 bp GGAGTCAGCGGGCGTCGCTTCTCCGCGCCGAGTGAGCCGAGGGAATaGGGTTCCCGGGGTGCCCGCTTCTTGCGCCTTTTCTCCCGTGCG +
Preference number: 5 (lower is better)
Translates to: GVSGRRFSAPSEPRE*GSRGARFLRLFSRA
Trigger: CGCACGGGAGAAAAGGCGCAAGAAGCGGGCACCCCGGGAACCCCATTCCCTCGGCTCACTCGGCGCGGAGAAGCGACGCCCGCTGACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS CCA 90 bp CCTCCGGGACGTTGTACAGCGGGTGGGCGAAGAGGGCCTGCAACTTaGAGCTCGACCCGCTGTGGCTGCCGCCAGCCGGTTCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: PPGRCTAGGRRGPAT*SSTRCGCRQPVQSG
Trigger: CCCGGACTGAACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTTCGCCCACCCGCTGTACAACGTCCCGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS CCA 90 bp AGCGGGTGGGCGAAGAGGGCCTGCAACTTGGAGCTCGACCCGCTGTaGCTGCCGCCAGCCGGTTCAGTCCGGGGCTCGGTTCGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: SGWAKRACNLELDPL*LPPAGSVRGSVREK
Trigger: CTTTTCCCGAACCGAGCCCCGGACTGAACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTTCGCCCACCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS GCA 90 bp GGTGGGCGAAGAGGGCCTGCAACTTGGAGCTCGACCCGCTGTGGCTaGCGCCAGCCGGTTCAGTCCGGGGCTCGGTTCGGGAAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: GGRRGPATWSSTRCG*RQPVQSGARFGKSC
Trigger: ACAACTTTTCCCGAACCGAGCCCCGGACTGAACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTTCGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS-3UTR CAA 90 bp CTCCCAGCAGTAACAGGTGGGAGTGAGGACGCAGGGTCGGCACTCGAGTCGACTGGCTCCTCCGGGACGTaGTACAGCGGGTGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: LPAVTGGSEDAGSALESTGSSGT*YSGWAK
Trigger: CTTCGCCCACCCGCTGTACAACGTCCCGGAGGAGCC...AGTCGACTCGAGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACTGCTGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp GCCAAGCCTGACCTATACCCAGATTTCCCAGTGCACTCAGGAGATCGTCGGTGGGGCGCGAGTGGGGAGTaGGCGAAGCAGGAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: AKPDLYPDFPVHSGDRRWGASGE*AKQERL
Trigger: GAGCCGCTCCTGCTTCGCCAACTCCCCACTCGCGCC...CCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp TTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTCGGAAGTCGGCTCCTCCGGGACGTaGTACAGCGGGTGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: FLGDIYYPPHCWRHPSEVGSSGT*YSGWAK
Trigger: CTTCGCCCACCCGCTGTACAACGTCCCGGAGGAGCC...GACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGGAGCGGATCCAGGGGTaGGGCACAGACAGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVERIQG*GTDSLG
Trigger: CCCCAGGCTGTCTGTGCCCAACCCCTGGATCCGCTC...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp GACAGAAGCGGTGCACCAAGGAGTAAAGATTCAGTTCCATGGGCCCCACTTGCTCGGGGTGCCCGCTTCTaGCGCCTTTTCTCCCGTGCG +
Preference number: 5 (lower is better)
Translates to: DRSGAPRSKDSVPWAPLARGARF*RLFSRA
Trigger: CGCACGGGAGAAAAGGCGCAAGAAGCGGGCACCCCG...AGCAAGTGGGGCCCATGGAACTGAATCTTTACTCCTTGGTGCACCGCTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp TACTCCGTCTTGCACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCTGAGCGGATCCAGGGGTaGGGCACAGACAGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: YSVLHMYGHLAKKHTLLAERIQG*GTDSLG
Trigger: CCCCAGGCTGTCTGTGCCCAACCCCTGGATCCGCTC...AGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp GGCCAACTGTTCCACTGGGCCGTCGACTATGACACTCTGCTGTCCATGGGCCACGGCCCCACTTGCTGTTaGAGAAAATGTCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GQLFHWAVDYDTLLSMGHGPTCC*RKCPAS
Trigger: GGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCC...GTGGCCCATGGACAGCAGAGTGTCATAGTCGACGGCCCAGTGGAACAGTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR CAA 90 bp CTCCCAGCAGTAACAGGTGGGAGTGAGGACGCAGGGTCGGCACTCGAGTCGACTTTCCATGGGCCCCACTaGCTGTTTGAGAAAATGTCC +
Preference number: 5 (lower is better)
Translates to: LPAVTGGSEDAGSALESTFHGPH*LFEKMS
Trigger: GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAA...AGTCGACTCGAGTGCCGACCCTGCGTCCTCACTCCCACCTGTTACTGCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp TGGGGTCTTAGGGAAGAAGATTGTGGTTGGTGGGCTGTAGTCAGCCTTGGCTCTGTGTCGCTCCTCAACTaGGGGACCAGGTGCACGGAG +
Preference number: 5 (lower is better)
Translates to: WGLREEDCGWWAVVSLGSVSLLN*GTRCTE
Trigger: CTCCGTGCACCTGGTCCCCAAGTTGAGGAGCGACAC...AGAGCCAAGGCTGACTACAGCCCACCAACCACAATCTTCTTCCCTAAGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp GAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTTGTCAAGAAGAGGGCCTGCAACTaGGAGCTCGACCCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: EDGDFIMGVSSEPSGVVKKRACN*ELDPLW
Trigger: CCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTT...CTTGACAACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp AAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCAGCTGGCGCTGTACTaGGGGCCAGAGGTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: KPVLFGKNGARQRTTEAVQLALY*GPEVEV
Trigger: TACTTCCACCTCTGGCCCCAAGTACAGCGCCAGCTG...CACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp GTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAATCGGTTCGGGAAAAGTaGTGCACGATCGTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: VLFGKNGARQRTTEAVHQSVREK*CTIVPG
Trigger: CCCCGGCACGATCGTGCACAACTTTTCCCGAACCGA...TTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp AGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGAAGAGGGCCTGCAACTaGGAGCTCGACCCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RSSVALMKPVLFGKNGARKRACN*ELDPLW
Trigger: CCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTT...CCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp GCCAAGCCTGACCTATACCCAGATTTCCCAGTGCACTCAGGAGATCGTCGGTGGTGCTCTCTGTACATCTaGTGTCGCCTGTTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: AKPDLYPDFPVHSGDRRWCSLYI*CRLFQR
Trigger: CCGCTGGAACAGGCGACACAAGATGTACAGAGAGCA...CCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp GAGGCGAGAGGATGGAGATTTCATCATGGGAGTGTCGTCCGAACCCTCTGGCGTGCTTGGAAAACAGAGTaGCAAGGAGGCCTCAGGGGT +
Preference number: 5 (lower is better)
Translates to: EARGWRFHHGSVVRTLWRAWKTE*QGGLRG
Trigger: ACCCCTGAGGCCTCCTTGCAACTCTGTTTTCCAAGC...ACGCCAGAGGGTTCGGACGACACTCCCATGATGAAATCTCCATCCTCTCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS TCA 90 bp AATGGTGCCGGTCCATATTCCCTGGTTTCCCCTCACTTGGTGAAGTaGACATACAGCTTCCAATCTGACGCCCACTCAGGCCCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: NGAGPYSLVSPHLVK*TYSFQSDAHSGPWQ
Trigger: CTGCCACGGGCCTGAGTGGGCGTCAGATTGGAAGCTGTATGTTCACTTCACCAAGTGAGGGGAAACCAGGGAATATGGACCGGCACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS-3UTR CAA 90 bp ACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCTGGAGAGACAAAGACTATCCTCCCCACTGTaGGCGGCACCCGTCGGAAGT +
Preference number: 5 (lower is better)
Translates to: TCMDTWRRSTRCSLERQRLSSPL*AAPVGS
Trigger: ACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATAG...TCTTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp GAGGACGCAGGGTCGGCACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTACAGCATACTCCGTCTaGCACATGTATGGACACTTG +
Preference number: 5 (lower is better)
Translates to: EDAGSALESTALAPGVFSTAYSV*HMYGHL
Trigger: CAAGTGTCCATACATGTGCAAGACGGAGTATGCTGT...AGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTGCCGACCCTGCGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp TCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCGTCTTGCACATGTATGGATCCAGCAGGTGTGGGTaGCCACAGACAGCATACTCC +
Preference number: 5 (lower is better)
Translates to: SSRCGLPQTAYSVLHMYGSSRCG*PQTAYS
Trigger: GGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGA...TCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp TCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCGTCTTGCACATGTATGGAGCCATGTCGATGACATaGAGGAGCCGCTGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SSRCGLPQTAYSVLHMYGAMSMT*RSRWLL
Trigger: CAACAGCCAGCGGCTCCTCAATGTCATCGACATGGC...TCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGTCCTTCCTAGCTGACTaGACTCCCAGCAGTAACAGG +
Preference number: 5 (lower is better)
Translates to: WSRAPETKRSACLGPKCWSFLAD*TPSSNR
Trigger: CCTGTTACTGCTGGGAGTCAAGTCAGCTAGGAAGGA...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp TTAGCCTGGCCAGAGTCTGGGGCCAACTGTTCCACTGGGCCGTCGACTATGACATTCCATGGGCCCCACTaGCTGTTTGAGAAAATGTCC +
Preference number: 5 (lower is better)
Translates to: LAWPESGANCSTGPSTMTFHGPH*LFEKMS
Trigger: GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAA...TGTCATAGTCGACGGCCCAGTGGAACAGTTGGCCCCAGACTCTGGCCAGGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR CAA 90 bp GCCAAGCCTGACCTATACCCAGATTTCCCAGTGCACTCAGGAGATCGTCGGTGGGGAAGAAGATTGTGGTaGGTGGGCTGTAGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: AKPDLYPDFPVHSGDRRWGRRLW*VGCSQP
Trigger: AGGCTGACTACAGCCCACCAACCACAATCTTCTTCC...CCACCGACGATCTCCTGAGTGCACTGGGAAATCTGGGTATAGGTCAGGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp CATGGGCCACTATGCACCCCTCCACTGTCCTTAGGATGGTTTGGAGCCTTCGATTCCTTCCTAGCTGACTaGACTCCCAGCAGTAACAGG +
Preference number: 5 (lower is better)
Translates to: HGPLCTPPLSLGWFGAFDSFLAD*TPSSNR
Trigger: CCTGTTACTGCTGGGAGTCAAGTCAGCTAGGAAGGA...ATCGAAGGCTCCAAACCATCCTAAGGACAGTGGAGGGGTGCATAGTGGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590873.5
CDS-3UTR CAA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGAGATCGTCGGTGGCCTaGATGAAGCCAGTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: WSRAPETKRSACLGPKCWRSSVA*MKPVLF
Trigger: AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp TGGTCTCGAGCTCCTGAGACCAAGCGATCTGCCTGTTTAGGCCCAAAGTGCTGGGATAGGCCAGGTGTTTaGTCTGGACCAGGAGTTATC +
Preference number: 5 (lower is better)
Translates to: WSRAPETKRSACLGPKCWDRPGV*SGPGVI
Trigger: GATAACTCCTGGTCCAGACAAAACACCTGGCCTATC...CCAGCACTTTGGGCCTAAACAGGCAGATCGCTTGGTCTCAGGAGCTCGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGGCGGCTCCGGGGAGCTaGTCTGTGCGCCTGGACTCC +
Preference number: 5 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFEAAPGS*SVRLDS
Trigger: GGAGTCCAGGCGCACAGACAAGCTCCCCGGAGCCGC...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCGCCATGTCGATGACATaGAGGAGCCGCTGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PTCCLRKCPASFLADLTPAMSMT*RSRWLL
Trigger: CAACAGCCAGCGGCTCCTCAATGTCATCGACATGGC...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp TGCCTGCGCTGGCCCAAAGTGCAGATTTTTAGTCAGCTTGTGATAGGCCAGGTGGGCCCCACTTGCTGTTaGAGAAAATGTCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: CLRWPKVQIFSQLVIGQVGPTCC*RKCPAS
Trigger: GGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCC...CACCTGGCCTATCACAAGCTGACTAAAAATCTGCACTTTGGGCCAGCGCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp AGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCAGATCGTCGGTGGCCTaGATGAAGCCAGTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SQCFLGKTEQGNARQKRCRSSVA*MKPVLF
Trigger: AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT...GCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp ATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTTGCTTCTGTAGCGTaGGTGAGTGCCTCACCTGGT +
Preference number: 5 (lower is better)
Translates to: MKPVLFGKNGARQRTTEAVASVA*VSASPG
Trigger: ACCAGGTGAGGCACTCACCAACGCTACAGAAGCAAC...CGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp GAGTCTGTAGTCAGCTTGGGCCAGCAGCTGCAGGTGCAAAAGTGTTTTCTTTTTTCGGTTCGGGAAAAGTaGTGCACGATCGTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: ESVVSLGQQLQVQKCFLFSVREK*CTIVPG
Trigger: CCCCGGCACGATCGTGCACAACTTTTCCCGAACCGA...AAAAAGAAAACACTTTTGCACCTGCAGCTGCTGGCCCAAGCTGACTACAGACTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp TGGGGTCTTAGGGAAGAAGATTGTGGTTGGTGGGCTGTAGTCAGCCTTGGCTCTATGTCTTGCAGAAGTTaGCTGACAACAGGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: WGLREEDCGWWAVVSLGSMSCRS*LTTGLD
Trigger: GTCCAGCCCTGTTGTCAGCAAACTTCTGCAAGACAT...AGAGCCAAGGCTGACTACAGCCCACCAACCACAATCTTCTTCCCTAAGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCGCGAAGAAGCACACGTaGCTCGCTGGAGAGACAAAG +
Preference number: 5 (lower is better)
Translates to: PTCCLRKCPASFLADLTPAKKHT*LAGETK
Trigger: CTTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGC...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp GTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAACACATGTATGGACACTaGGCGAAGAAGCACACGTTG +
Preference number: 5 (lower is better)
Translates to: VLFGKNGARQRTTEAVHQHMYGH*AKKHTL
Trigger: CAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTG...TTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp TTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTATCCAGCAGGTGTGGGTaGCCACAGACAGCATACTCC +
Preference number: 5 (lower is better)
Translates to: FSSMGPTCCLRKCPASFLSSRCG*PQTAYS
Trigger: GGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGA...TAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCCTGTCAGAGTTACTGTaGCCTGCGCTGGCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: PTCCLRKCPASFLADLTPLSELL*PALAQS
Trigger: ACTTTGGGCCAGCGCAGGCAACAGTAACTCTGACAG...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp CTTCCCGAAATCCGAGAACCTCAGCACCAGCTTGAGGTGGACCCCACTGGGTTTGAAGATGTGCAAAGCTaGGAAAACAGAGTTGCAAGG +
Preference number: 5 (lower is better)
Translates to: LPEIREPQHQLEVDPTGFEDVQS*ENRVAR
Trigger: CCTTGCAACTCTGTTTTCCAAGCTTTGCACATCTTC...AAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp TCTAGGATTTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTATGTCTTGCAGAAGTTaGCTGACAACAGGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SRISLVTFTILPTVGGTRMSCRS*LTTGLD
Trigger: GTCCAGCCCTGTTGTCAGCAAACTTCTGCAAGACAT...ACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAAATCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp TCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAACTTGGTGAACATGCGAAGAAGCACACGTaGCTCGCTGGAGAGACAAAG +
Preference number: 5 (lower is better)
Translates to: SGVVKVNKEPIIPELGEHAKKHT*LAGETK
Trigger: CTTTGTCTCTCCAGCGAGCAACGTGTGCTTCTTCGC...ATGTTCACCAAGTTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCGGTCAGAAGTGTTATTaGTCCAGTCGAGGCTATCTT +
Preference number: 5 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSAGQKCY*SSRGYL
Trigger: AAGATAGCCTCGACTGGACAAATAACACTTCTGACC...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCCAAGGCTTTCTCATCTaGACTGTAATCAGCACTGAT +
Preference number: 5 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSAQGFLI*TVISTD
Trigger: ATCAGTGCTGATTACAGTCAAGATGAGAAAGCCTTG...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp TCTAGGATTTCCTTGGTGACATTTACTATCCTCCCCACTGTTGGCGGCACCCGTACAGCATACTCCGTCTaGCACATGTATGGACACTTG +
Preference number: 5 (lower is better)
Translates to: SRISLVTFTILPTVGGTRTAYSV*HMYGHL
Trigger: CAAGTGTCCATACATGTGCAAGACGGAGTATGCTGT...ACGGGTGCCGCCAACAGTGGGGAGGATAGTAAATGTCACCAAGGAAATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp GGGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAATCCTTCCTAGCTGACTaGACTCCCAGCAGTAACAGG +
Preference number: 5 (lower is better)
Translates to: GVRSVICPVEAIFAHTAESFLAD*TPSSNR
Trigger: CCTGTTACTGCTGGGAGTCAAGTCAGCTAGGAAGGA...TTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp CCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAGCTGACTTGACTCCCTTCCATGGGCCCCACTaGCTGTTTGAGAAAATGTCC +
Preference number: 5 (lower is better)
Translates to: PTCCLRKCPASFLADLTPFHGPH*LFEKMS
Trigger: GGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAA...GGGAGTCAAGTCAGCTAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp AAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAAGGAGTAAAGATTGATAGGCCAGGTGTTTaGTCTGGACCAGGAGTTATC +
Preference number: 5 (lower is better)
Translates to: KNGARQRTTEAVHQGVKIDRPGV*SGPGVI
Trigger: GATAACTCCTGGTCCAGACAAAACACCTGGCCTATC...AATCTTTACTCCTTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp AGTACTCTCCTGGGATCAAGGCTGCCAAGCCTGACCTATACCCAGATTTCCCAGGGGTTGTATCTGTGTTaGAGAGGATTGGAAACCTGT +
Preference number: 5 (lower is better)
Translates to: STLLGSRLPSLTYTQISQGLYLC*RGLETC
Trigger: ACAGGTTTCCAATCCTCTCAAACACAGATACAACCC...CTGGGAAATCTGGGTATAGGTCAGGCTTGGCAGCCTTGATCCCAGGAGAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp GGCCTTGATGAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACGGGTTGTATCTGTGTTaGAGAGGATTGGAAACCTGT +
Preference number: 5 (lower is better)
Translates to: GLDEASAFWEKRSKATHDGLYLC*RGLETC
Trigger: ACAGGTTTCCAATCCTCTCAAACACAGATACAACCC...GTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTCATCAAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp TTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTAAGATCGTCGGTGGCCTaGATGAAGCCAGTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: FSSMGPTCCLRKCPASFLRSSVA*MKPVLF
Trigger: AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCT...TAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590873.5
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp AAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAAGGAGTAAAGATTATTGGAGGATGGGGGTaGTATCTGTGTTTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: KNGARQRTTEAVHQGVKIIGGWG*YLCLRG
Trigger: TCCTCTCAAACACAGATACAACCCCCATCCTCCAAT...AATCTTTACTCCTTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS TCA 90 bp CCAGATGGAAAGCTGCGATCTCAGCATTGTGTCTCTGAAAGTCAATaGAGTAGAAGAAGTCCACTGGTGTCTCCTCATCTCGCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: PDGKLRSQHCVSESQ*SRRSPLVSPHLAAH
Trigger: ATGAGCAGCGAGATGAGGAGACACCAGTGGACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAGATCGCAGCTTTCCATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226094.9
CDS CCA 90 bp CTCAGCATTGTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCCACTaGTGTCTCCTCATCTCGCTGCTCATGGGTTTGAACATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LSIVSLKVNEVEEVH*CLLISLLMGLNMAF
Trigger: GAAGGCCATGTTCAAACCCATGAGCAGCGAGATGAGGAGACACCAGTGGACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226094.9
CDS-3UTR CAA 90 bp CCCTCTGGCGTTGTCAAGGTGAATAAGGAACCCATCATCCCCGAACTTGGTGAACAAGGCTTTCTCATCTaGACTGTAATCAGCACTGAT +
Preference number: 5 (lower is better)
Translates to: PSGVVKVNKEPIIPELGEQGFLI*TVISTD
Trigger: ATCAGTGCTGATTACAGTCAAGATGAGAAAGCCTTG...TTCACCAAGTTCGGGGATGATGGGTTCCTTATTCACCTTGACAACGCCAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp TACTCCGTCTTGCACATGTATGGACACTTGGCGAAGAAGCACACGTTGCTCGCTACCTCTAGGATTTCCTaGGTGACATTTACTATCCTC +
Preference number: 5 (lower is better)
Translates to: YSVLHMYGHLAKKHTLLATSRIS*VTFTIL
Trigger: GAGGATAGTAAATGTCACCAAGGAAATCCTAGAGGT...AGCGAGCAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTGCAAGACGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp CACTCGAGTCGACTGCTCTGGCTCCAGGCGTATTTTCTGAAACTGGACTCTGCCAAGTCAGGTATCCACTaGATGTCCTTTTATTTGACT +
Preference number: 5 (lower is better)
Translates to: HSSRLLWLQAYFLKLDSAKSGIH*MSFYLT
Trigger: AGTCAAATAAAAGGACATCAAGTGGATACCTGACTT...GGCAGAGTCCAGTTTCAGAAAATACGCCTGGAGCCAGAGCAGTCGACTCGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp GCTATCTTTGCTCACACTGCAGAAAGCTTGGAGACATTTCTGGTTCTTGACCTTGGAAGAAGATTGTGGTaGGTGGGCTGTAGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: AIFAHTAESLETFLVLDLGRRLW*VGCSQP
Trigger: AGGCTGACTACAGCCCACCAACCACAATCTTCTTCC...AAGGTCAAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTGAGCAAAGATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGGTTGCTTCTGTAGCGTaGGTGAGTGCCTCACCTGGT +
Preference number: 5 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFEVASVA*VSASPG
Trigger: ACCAGGTGAGGCACTCACCAACGCTACAGAAGCAAC...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp TTTCCCAGTGCACTCAGGAGATCGTCGGTGGCCTTGATGAAGCCAGTGCTTTTTTGTGTATATAGGCCATaGGAAAACCAGTCCTTCGTT +
Preference number: 5 (lower is better)
Translates to: FPSALRRSSVALMKPVLFCVYRP*ENQSFV
Trigger: AACGAAGGACTGGTTTTCCAATGGCCTATATACACA...AAAAAGCACTGGCTTCATCAAGGCCACCGACGATCTCCTGAGTGCACTGGGAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS TCA 90 bp AAATTCTGCCTGGTTACTTCTTTTCCCACGATGATCATGACGGCTTaGCTGATGGATCGATTCACTCAGTCAGCTAGTGTGGAGTACCTG +
Preference number: 5 (lower is better)
Translates to: KFCLVTSFPTMIMTA*LMDRFTQSASVEYL
Trigger: CAGGTACTCCACACTAGCTGACTGAGTGAATCGATCCATCAGTCAAGCCGTCATGATCATCGTGGGAAAAGAAGTAACCAGGCAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS-3UTR CAA 90 bp TTACTCTCTCTGAGATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTGGCCCCACTTGCTGTTaGAGAAAATGTCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LLSLRFKVLPCTLEDGGCGPTCC*RKCPAS
Trigger: GGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCC...ACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATCTCAGAGAGAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp GAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTAAGTCAGGTATCCACTaGATGTCCTTTTATTTGACT +
Preference number: 5 (lower is better)
Translates to: EASAFWEKRSKATHDRSGKSGIH*MSFYLT
Trigger: AGTCAAATAAAAGGACATCAAGTGGATACCTGACTT...ACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp TTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTACACACTGCAGAAAGCTaGGAGACATTTCTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: FSSMGPTCCLRKCPASFLHTAES*ETFLVL
Trigger: AAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTG...TAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp GGGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAACACACTGCAGAAAGCTaGGAGACATTTCTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: GVRSVICPVEAIFAHTAEHTAES*ETFLVL
Trigger: AAGAACCAGAAATGTCTCCAAGCTTTCTGCAGTGTG...TTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp GTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTGCACCAACAGTTAAGGAAATCTTaGGGATTAAGGTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: VLFGKNGARQRTTEAVHQQLRKS*GLRFLC
Trigger: ACAGAGAAACCTTAATCCCAAAGATTTCCTTAACTG...TTGGTGCACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp GAAGCCAGTGCTTTTTGGGAAAAACGGAGCAAGGCAACGCACGACAGAAGCGGTCAGTTAAGGAAATCTTaGGGATTAAGGTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: EASAFWEKRSKATHDRSGQLRKS*GLRFLC
Trigger: ACAGAGAAACCTTAATCCCAAAGATTTCCTTAACTG...ACCGCTTCTGTCGTGCGTTGCCTTGCTCCGTTTTTCCCAAAAAGCACTGGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp TCCAGCAGGTGTGGGTTGCCACAGACAGCATACTCCGTCTTGCACATGTATGGAAGCACACTTGGAAAATaGTCTGATATTTCATTAGGG +
Preference number: 5 (lower is better)
Translates to: SSRCGLPQTAYSVLHMYGSTLGK*SDISLG
Trigger: CCCTAATGAAATATCAGACAATTTTCCAAGTGTGCT...TCCATACATGTGCAAGACGGAGTATGCTGTCTGTGGCAACCCACACCTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp GGGGTCAGAAGTGTTATTTGTCCAGTCGAGGCTATCTTTGCTCACACTGCAGAAACCTCTAGGATTTCCTaGGTGACATTTACTATCCTC +
Preference number: 5 (lower is better)
Translates to: GVRSVICPVEAIFAHTAETSRIS*VTFTIL
Trigger: GAGGATAGTAAATGTCACCAAGGAAATCCTAGAGGT...TTCTGCAGTGTGAGCAAAGATAGCCTCGACTGGACAAATAACACTTCTGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS-3UTR CAA 90 bp GAAAGCTGCGATCTCAGCATTGTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCCACATGTATGGACACTaGGCGAAGAAGCACACGTTG +
Preference number: 5 (lower is better)
Translates to: ESCDLSIVSLKVNEVEEVHMYGH*AKKHTL
Trigger: CAACGTGTGCTTCTTCGCCAAGTGTCCATACATGTG...GACTTCTTCTACTTCATTGACTTTCAGAGACACAATGCTGAGATCGCAGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590074.5
CDS-3UTR CAA 90 bp TTCAGTTCCATGGGCCCCACTTGCTGTTTGAGAAAATGTCCTGCTTCCTTCCTATGTGTATATAGGCCATaGGAAAACCAGTCCTTCGTT +
Preference number: 5 (lower is better)
Translates to: FSSMGPTCCLRKCPASFLCVYRP*ENQSFV
Trigger: AACGAAGGACTGGTTTTCCAATGGCCTATATACACA...TAGGAAGGAAGCAGGACATTTTCTCAAACAGCAAGTGGGGCCCATGGAACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS-3UTR CAA 90 bp GATTTAAAGTTCTTCCATGCACATTGGAGGATGGGGGTTGTATCTGTGTTTGAGATTGGAGGATGGGGGTaGTATCTGTGTTTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: DLKFFHAHWRMGVVSVFEIGGWG*YLCLRG
Trigger: TCCTCTCAAACACAGATACAACCCCCATCCTCCAAT...CTCAAACACAGATACAACCCCCATCCTCCAATGTGCATGGAAGAACTTTAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592554.2
ENST00000619787.4
CDS CAA 90 bp CGGGCACCCCCGCGGGCGCTCCCGAGGCCGCAGCTGGCGCTGTACTaGGGGCCAGAGGTGGAAGTAGAGGTCGGCGGAGAGCAGCGCGCC +
Preference number: 6 (lower is better)
Translates to: RAPPRALPRPQLALY*GPEVEVEVGGEQRA
Trigger: GGCGCGCTGCTCTCCGCCGACCTCTACTTCCACCTCTGGCCCCAAGTACAGCGCCAGCTGCGGCCTCGGGAGCGCCCGCGGGGGTGCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS CAA 90 bp GAGACGCCAGTGCCGGCGGCTGGCACGGGCGGCGCGAGTGGGGAGTaGGCGAAGCAGGAGCGGCTCCGGGGAGCTTGTCTGTGCGCCTGG +
Preference number: 6 (lower is better)
Translates to: ETPVPAAGTGGASGE*AKQERLRGACLCAW
Trigger: CCAGGCGCACAGACAAGCTCCCCGGAGCCGCTCCTGCTTCGCCAACTCCCCACTCGCGCCGCCCGTGCCAGCCGCCGGCACTGGCGTCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS GCA 72 bp TTCCCGGGGTGCCCGCTTCTTGCGCCTTTTCTCCCGTaGGCCCGCCCGCCCGGACGCTCGCGGCAGGTGAAG +
Preference number: 6 (lower is better)
Translates to: FPGCPLLAPFLP*ARPPGRSRQVK
Trigger: CTTCACCTGCCGCGAGCGTCCGGGCGGGCGGGCGCACGGGAGAAAAGGCGCAAGAAGCGGGCACCCCGGGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS CCA 72 bp TGCCGGCGGCTGGCACGGGCGGCGCGAGTGGGGAGTTaGCGAAGCAGGAGCGGCTCCGGGGAGCTTGTCTGT +
Preference number: 6 (lower is better)
Translates to: CRRLARAARVGS*RSRSGSGELVC
Trigger: ACAGACAAGCTCCCCGGAGCCGCTCCTGCTTCGCCAACTCCCCACTCGCGCCGCCCGTGCCAGCCGCCGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS CCA 72 bp GGGTGCGGGCAGAAGAGGTGCCTGGAGTCCCGCGGGTaGGCCGGGGTCAGTGAGACCGGAATGCTCCCCGCG +
Preference number: 6 (lower is better)
Translates to: GCGQKRCLESRG*AGVSETGMLPA
Trigger: CGCGGGGAGCATTCCGGTCTCACTGACCCCGGCCCACCCGCGGGACTCCAGGCACCTCTTCTGCCCGCACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS TCA 72 bp GGAGGCCGCCGGCTGCAAAGCCCGGGGCGTCTCTCCTaGGGATGCTGTCGCTCGGCGGCGGCTGCTAGTGCT +
Preference number: 6 (lower is better)
Translates to: GGRRLQSPGRLS*GCCRSAAAASA
Trigger: AGCACTAGCAGCCGCCGCCGAGCGACAGCATCCTCAGGAGAGACGCCCCGGGCTTTGCAGCCGGCGGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS CAA 72 bp CCGCGGGCGCTCCCGAGGCCGCAGCTGGCGCTGTACTaGGGGCCAGAGGTGGAAGTAGAGGTCGGCGGAGAG +
Preference number: 6 (lower is better)
Translates to: PRALPRPQLALY*GPEVEVEVGGE
Trigger: CTCTCCGCCGACCTCTACTTCCACCTCTGGCCCCAAGTACAGCGCCAGCTGCGGCCTCGGGAGCGCCCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS GCA 72 bp AGAGGGCCTGCAACTTGGAGCTCGACCCGCTGTGGCTaGCGCCAGCCGGTTCAGTCCGGGGCTCGGTTCGGG +
Preference number: 6 (lower is better)
Translates to: RGPATWSSTRCG*RQPVQSGARFG
Trigger: CCCGAACCGAGCCCCGGACTGAACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS CAA 90 bp TCCTCCGGGACGTTGTACAGCGGGTGGGCGAAGAGGGCCTGCAACTaGGAGCTCGACCCGCTGTGGCTGCCGCCAGCCGGTTCAGTCCGG +
Preference number: 6 (lower is better)
Translates to: SSGTLYSGWAKRACN*ELDPLWLPPAGSVR
Trigger: CCGGACTGAACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTTCGCCCACCCGCTGTACAACGTCCCGGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS CCA 72 bp AAGCAGGAGCGGCTCCGGGGAGCTTGTCTGTGCGCCTaGACTCCTAGAGGCAGAGGTAGCGCGGGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: KQERLRGACLCA*TPRGRGSAGPP
Trigger: GGGAGGCCCCGCGCTACCTCTGCCTCTAGGAGTCCAGGCGCACAGACAAGCTCCCCGGAGCCGCTCCTGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS CCA 72 bp GGGCGTCGCTTCTCCGCGCCGAGTGAGCCGAGGGAATaGGGTTCCCGGGGTGCCCGCTTCTTGCGCCTTTTC +
Preference number: 6 (lower is better)
Translates to: GRRFSAPSEPRE*GSRGARFLRLF
Trigger: GAAAAGGCGCAAGAAGCGGGCACCCCGGGAACCCCATTCCCTCGGCTCACTCGGCGCGGAGAAGCGACGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS CCA 72 bp GCGAAGAGGGCCTGCAACTTGGAGCTCGACCCGCTGTaGCTGCCGCCAGCCGGTTCAGTCCGGGGCTCGGTT +
Preference number: 6 (lower is better)
Translates to: AKRACNLELDPL*LPPAGSVRGSV
Trigger: AACCGAGCCCCGGACTGAACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS CCA 72 bp CCACCTTCCTCCGGTAATACCGCAGCGCCTCCTGGCTaGCCAGGAGCGAGTCCTCGGCTCCCAGGAGAGGCG +
Preference number: 6 (lower is better)
Translates to: PPSSGNTAAPPG*PGASPRLPGEA
Trigger: CGCCTCTCCTGGGAGCCGAGGACTCGCTCCTGGCCAGCCAGGAGGCGCTGCGGTATTACCGGAGGAAGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS CAA 90 bp AGGAGCGAGTCCTCGGCTCCCAGGAGAGGCGGCTCCTCCGGGACGTaGTACAGCGGGTGGGCGAAGAGGGCCTGCAACTTGGAGCTCGAC +
Preference number: 6 (lower is better)
Translates to: RSESSAPRRGGSSGT*YSGWAKRACNLELD
Trigger: GTCGAGCTCCAAGTTGCAGGCCCTCTTCGCCCACCCGCTGTACAACGTCCCGGAGGAGCCGCCTCTCCTGGGAGCCGAGGACTCGCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS GCA 72 bp TTGGCGAAGCAGGAGCGGCTCCGGGGAGCTTGTCTGTaGGCCTGGACTCCTAGAGGCAGAGGTAGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: LAKQERLRGACL*AWTPRGRGSAG
Trigger: CCCCGCGCTACCTCTGCCTCTAGGAGTCCAGGCGCACAGACAAGCTCCCCGGAGCCGCTCCTGCTTCGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592554.2
CDS GCA 72 bp TCCGGGACGTTGTACAGCGGGTGGGCGAAGAGGGCCTaGAACTTGGAGCTCGACCCGCTGTGGCTGCCGCCA +
Preference number: 6 (lower is better)
Translates to: SGTLYSGWAKRA*NLELDPLWLPP
Trigger: TGGCGGCAGCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTTCGCCCACCCGCTGTACAACGTCCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS CCA 72 bp CGTTGTACAGCGGGTGGGCGAAGAGGGCCTGCAACTTaGAGCTCGACCCGCTGTGGCTGCCGCCAGCCGGTT +
Preference number: 6 (lower is better)
Translates to: RCTAGGRRGPAT*SSTRCGCRQPV
Trigger: AACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTTCGCCCACCCGCTGTACAACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS CAA 72 bp ACGTTGTACAGCGGGTGGGCGAAGAGGGCCTGCAACTaGGAGCTCGACCCGCTGTGGCTGCCGCCAGCCGGT +
Preference number: 6 (lower is better)
Translates to: TLYSGWAKRACN*ELDPLWLPPAG
Trigger: ACCGGCTGGCGGCAGCCACAGCGGGTCGAGCTCCAAGTTGCAGGCCCTCTTCGCCCACCCGCTGTACAACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS CAA 72 bp TCCTCGGCTCCCAGGAGAGGCGGCTCCTCCGGGACGTaGTACAGCGGGTGGGCGAAGAGGGCCTGCAACTTG +
Preference number: 6 (lower is better)
Translates to: SSAPRRGGSSGT*YSGWAKRACNL
Trigger: CAAGTTGCAGGCCCTCTTCGCCCACCCGCTGTACAACGTCCCGGAGGAGCCGCCTCTCCTGGGAGCCGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590074.5
ENST00000592554.2
CDS CAA 90 bp CTAGGTCCTGGGGATACAGCAGTGAGGTCCTTGGTCTCCCAGGGCTaGCTCGGGAACCAGGTGTCCCTCCCATGGGATTCTCGTGTGCTC +
Preference number: 6 (lower is better)
Translates to: LGPGDTAVRSLVSQG*LGNQVSLPWDSRVL
Trigger: GAGCACACGAGAATCCCATGGGAGGGACACCTGGTTCCCGAGCAAGCCCTGGGAGACCAAGGACCTCACTGCTGTATCCCCAGGACCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS CAA 72 bp GGGGATACAGCAGTGAGGTCCTTGGTCTCCCAGGGCTaGCTCGGGAACCAGGTGTCCCTCCCATGGGATTCT +
Preference number: 6 (lower is better)
Translates to: GDTAVRSLVSQG*LGNQVSLPWDS
Trigger: AGAATCCCATGGGAGGGACACCTGGTTCCCGAGCAAGCCCTGGGAGACCAAGGACCTCACTGCTGTATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS CCA 72 bp AGCCTCTTGGACCCTGCGCCACTCATAGCACCTCCATaGGCTGTTCCTGCCCTTTCTCTCTCACACATGGTT +
Preference number: 6 (lower is better)
Translates to: SLLDPAPLIAPP*AVPALSLSHMV
Trigger: AACCATGTGTGAGAGAGAAAGGGCAGGAACAGCCCATGGAGGTGCTATGAGTGGCGCAGGGTCCAAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS TCA 72 bp TGGGCAAGGACGCGTAAGGCTGCATATTCCGTGTGGTaGGAAGGTCCTGGGTCCTTTAAGTCTGGTGGACAC +
Preference number: 6 (lower is better)
Translates to: WARTRKAAYSVW*EGPGSFKSGGH
Trigger: GTGTCCACCAGACTTAAAGGACCCAGGACCTTCTCACCACACGGAATATGCAGCCTTACGCGTCCTTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS GCA 72 bp TCGGGAACCAGGTGTCCCTCCCATGGGATTCTCGTGTaGTCCCTGGTTATAGCAAGTGCTGTGCTGTGTTTT +
Preference number: 6 (lower is better)
Translates to: SGTRCPSHGILV*SLVIASAVLCF
Trigger: AAAACACAGCACAGCACTTGCTATAACCAGGGAGCACACGAGAATCCCATGGGAGGGACACCTGGTTCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS TCA 72 bp GGTCCATATTCCCTGGTTTCCCCTCACTTGGTGAAGTaGACATACAGCTTCCAATCTGACGCCCACTCAGGC +
Preference number: 6 (lower is better)
Translates to: GPYSLVSPHLVK*TYSFQSDAHSG
Trigger: GCCTGAGTGGGCGTCAGATTGGAAGCTGTATGTTCACTTCACCAAGTGAGGGGAAACCAGGGAATATGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS TCA 72 bp CTCCCTGGTTATAGCAAGTGCTGTGCTGTGTTTTCGTaGTCTGGCTACATGTCTGTTCTCCCCACTAGACCA +
Preference number: 6 (lower is better)
Translates to: LPGYSKCCAVFS*SGYMSVLPTRP
Trigger: TGGTCTAGTGGGGAGAACAGACATGTAGCCAGATCACGAAAACACAGCACAGCACTTGCTATAACCAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS GCA 72 bp TCTCTCACACATGGTTTTCTGCCTACAATGCTCCGATaGCCATTTTCATCCGAGGGCTCTTCTCAGCCTTCA +
Preference number: 6 (lower is better)
Translates to: SLTHGFLPTMLR*PFSSEGSSQPS
Trigger: TGAAGGCTGAGAAGAGCCCTCGGATGAAAATGGGCATCGGAGCATTGTAGGCAGAAAACCATGTGTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS CCA 72 bp TTTTCAGATTCAAAAGCCAAGCTAGCAACAAGTCCCTaGTACAGGGTCTGTGGCTACTGTCAAGGACTGGGC +
Preference number: 6 (lower is better)
Translates to: FSDSKAKLATSP*YRVCGYCQGLG
Trigger: GCCCAGTCCTTGACAGTAGCCACAGACCCTGTACCAGGGACTTGTTGCTAGCTTGGCTTTTGAATCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS TCA 72 bp CTGGTTACTTCTTTTCCCACGATGATCATGACGGCTTaGCTGATGGATCGATTCACTCAGTCAGCTAGTGTG +
Preference number: 6 (lower is better)
Translates to: LVTSFPTMIMTA*LMDRFTQSASV
Trigger: CACACTAGCTGACTGAGTGAATCGATCCATCAGTCAAGCCGTCATGATCATCGTGGGAAAAGAAGTAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375556.8
CDS CCA 72 bp GTGTCTCTGAAAGTCAATGAAGTAGAAGAAGTCCACTaGTGTCTCCTCATCTCGCTGCTCATGGGTTTGAAC +
Preference number: 6 (lower is better)
Translates to: VSLKVNEVEEVH*CLLISLLMGLN
Trigger: GTTCAAACCCATGAGCAGCGAGATGAGGAGACACCAGTGGACTTCTTCTACTTCATTGACTTTCAGAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226094.9
CDS CAA 72 bp TCCAGGGAGGTAAGGTTCATCTGCTCTCTGTACATCTaGTGTCGCCATCAGATATGGTTTGGATGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: SREVRFICSLYI*CRHQIWFGCLS
Trigger: GGACAAACATCCAAACCATATCTGATGGCGACACAAGATGTACAGAGAGCAGATGAACCTTACCTCCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226094.9
ENST00000592847.1