Pregenerated sensors for FAM205C (Homo sapiens)
Ensembl gene IDs: ENSG00000187791Ensembl transcript IDs: ENST00000340783.11, ENST00000603592.1, ENST00000603640.6
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTGTGATGGGTATTCTTGCATAAAACAGTGCCTTCTGCTGAGGTaGGTTAGACCTGGGATAGATTTCCTGGTTGAGTGGCACAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: SCDGYSCIKQCLLLR*VRPGIDFLVEWHKS Trigger: TGACTTGTGCCACTCAACCAGGAAATCTATCCCAGGTCTAACTCACCTCAGCAGAAGGCACTGTTTTATGCAAGAATACCCATCACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| 3UTR-3UTR TCA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTAACAGTGCCTTCTGCTaGGGTGAGTTAGACCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GDCRGSGTYELLFLVMGINSAFC*GELDLG Trigger: TCCCAGGTCTAACTCACCTCAGCAGAAGGCACTGTT...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| 3UTR-3UTR TCA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTTGCCTTCTGCTGAGGTaGGTTAGACCTGGGATAGAT | + |
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Preference number: 2 (lower is better) Translates to: GDCRGSGTYELLFLVMGICLLLR*VRPGID Trigger: ATCTATCCCAGGTCTAACTCACCTCAGCAGAAGGCA...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| 3UTR-3UTR CCA 90 bp | AGGTACAAAGTATATTTGGAGAATGCCCTGCTTCACCTGCATGTTAATGGAAATGGACCCAGGATTGGCTaGACTGAAGGGAGTGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RYKVYLENALLHLHVNGNGPRIG*TEGSVA Trigger: AGCAACACTCCCTTCAGTCCAGCCAATCCTGGGTCC...ATTTCCATTAACATGCAGGTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| 3UTR-3UTR CCA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTGATTTCCTGGTTGAGTaGCACAAGTCATTTGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GDCRGSGTYELLFLVMGIDFLVE*HKSFED Trigger: GTCCTCAAATGACTTGTGCCACTCAACCAGGAAATC...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| 3UTR-3UTR TCA 90 bp | AGGTACAAAGTATATTTGGAGAATGCCCTGCTTCACCTGCATGTTAATGGAAATGTGGCACAAGTCATTTaGGGACAGAGTTTGGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: RYKVYLENALLHLHVNGNVAQVI*GQSLEH Trigger: ATGCTCCAAACTCTGTCCTCAAATGACTTGTGCCAC...ATTTCCATTAACATGCAGGTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| 3UTR-3UTR TCA 90 bp | AGGTACAAAGTATATTTGGAGAATGCCCTGCTTCACCTGCATGTTAATGGAAATAGGTTCAGGAACCTATaGACTCCTTTTTCTTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: RYKVYLENALLHLHVNGNRFRNL*TPFSCD Trigger: ATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCT...ATTTCCATTAACATGCAGGTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| 3UTR-3UTR GCA 90 bp | AGGTACAAAGTATATTTGGAGAATGCCCTGCTTCACCTGCATGTTAATGGAAATTGTGATGGGTATTCTTaGATAAAACAGTGCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RYKVYLENALLHLHVNGNCDGYS*IKQCLL Trigger: CAGAAGGCACTGTTTTATGCAAGAATACCCATCACA...ATTTCCATTAACATGCAGGTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| 3UTR TCA 72 bp | GGGTATTCTTGCATAAAACAGTGCCTTCTGCTGAGGTaGGTTAGACCTGGGATAGATTTCCTGGTTGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: GYSCIKQCLLLR*VRPGIDFLVEW Trigger: CCACTCAACCAGGAAATCTATCCCAGGTCTAACTCACCTCAGCAGAAGGCACTGTTTTATGCAAGAATACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| 3UTR-3UTR CAA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTAGTGGCACAAGTCATTaGAGGACAGAGTTTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: GDCRGSGTYELLFLVMGISGTSH*RTEFGA Trigger: TGCTCCAAACTCTGTCCTCAAATGACTTGTGCCACT...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| 3UTR TCA 72 bp | GCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTaGTGGGTATTCTTGCATAAAACAGTGCCTTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: AEVQEPMNSFFL*WVFLHKTVPSA Trigger: AGCAGAAGGCACTGTTTTATGCAAGAATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR CCA 90 bp | TTGAGGACAGAGTTTGGAGCATTTGTAGGAGTGGCACAGGACCCAGGATTGGCTGATTTCCTGGTTGAGTaGCACAAGTCATTTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LRTEFGAFVGVAQDPGLADFLVE*HKSFED Trigger: GTCCTCAAATGACTTGTGCCACTCAACCAGGAAATC...AGCCAATCCTGGGTCCTGTGCCACTCCTACAAATGCTCCAAACTCTGTCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR TCA 90 bp | TTGAGGACAGAGTTTGGAGCATTTGTAGGAGTGGCACAGGACCCAGGATTGGCTAGTTCTCCTAGCTCTTaGTGTTCTATCTCCAGACTT | + |
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Preference number: 4 (lower is better) Translates to: LRTEFGAFVGVAQDPGLASSPSS*CSISRL Trigger: AAGTCTGGAGATAGAACATCAAGAGCTAGGAGAACT...AGCCAATCCTGGGTCCTGTGCCACTCCTACAAATGCTCCAAACTCTGTCCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR GCA 90 bp | TTGAGGACAGAGTTTGGAGCATTTGTAGGAGTGGCACAGGACCCAGGATTGGCTTCAGGGTTAATCCAGTaGAGAAACAGCTTCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: LRTEFGAFVGVAQDPGLASGLIQ*RNSFIL Trigger: CAAGATGAAGCTGTTTCTGCACTGGATTAACCCTGA...AGCCAATCCTGGGTCCTGTGCCACTCCTACAAATGCTCCAAACTCTGTCCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR CCA 90 bp | TTGAGGACAGAGTTTGGAGCATTTGTAGGAGTGGCACAGGACCCAGGATTGGCTAGATTATTTAGGCACTaGGGGCATCACAGAAGATCA | + |
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Preference number: 4 (lower is better) Translates to: LRTEFGAFVGVAQDPGLARLFRH*GHHRRS Trigger: TGATCTTCTGTGATGCCCCCAGTGCCTAAATAATCT...AGCCAATCCTGGGTCCTGTGCCACTCCTACAAATGCTCCAAACTCTGTCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR TCA 90 bp | TTGAGGACAGAGTTTGGAGCATTTGTAGGAGTGGCACAGGACCCAGGATTGGCTAGGTTCAGGAACCTATaGACTCCTTTTTCTTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LRTEFGAFVGVAQDPGLARFRNL*TPFSCD Trigger: ATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCT...AGCCAATCCTGGGTCCTGTGCCACTCCTACAAATGCTCCAAACTCTGTCCTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR TCA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTGTGGCACAAGTCATTTaGGGACAGAGTTTGGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GDCRGSGTYELLFLVMGIVAQVI*GQSLEH Trigger: ATGCTCCAAACTCTGTCCTCAAATGACTTGTGCCAC...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR GCA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTGCCAACTTCTGGAGCTaGCAGCAATTGCTTAATCTC | + |
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Preference number: 4 (lower is better) Translates to: GDCRGSGTYELLFLVMGIANFWS*QQLLNL Trigger: GAGATTAAGCAATTGCTGGCAGCTCCAGAAGTTGGC...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR TCA 90 bp | AGGTACAAAGTATATTTGGAGAATGCCCTGCTTCACCTGCATGTTAATGGAAATAACAGTGCCTTCTGCTaGGGTGAGTTAGACCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RYKVYLENALLHLHVNGNNSAFC*GELDLG Trigger: TCCCAGGTCTAACTCACCTCAGCAGAAGGCACTGTT...ATTTCCATTAACATGCAGGTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR GCA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTCCTTTTTCAGGGGATTaGAGAGGTTCAGGAACCTAT | + |
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Preference number: 4 (lower is better) Translates to: GDCRGSGTYELLFLVMGIPFSGD*RGSGTY Trigger: ATAGGTTCCTGAACCTCTGCAATCCCCTGAAAAAGG...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR GCA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTATGCCCTGCTTCACCTaGATGTTAATGGAAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: GDCRGSGTYELLFLVMGIMPCFT*MLMEMA Trigger: TGCCATTTCCATTAACATGCAGGTGAAGCAGGGCAT...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR CCA 90 bp | TTGAGGACAGAGTTTGGAGCATTTGTAGGAGTGGCACAGGACCCAGGATTGGCTATCTTTGGTGACAGTTaGACTCTTCTCAATGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: LRTEFGAFVGVAQDPGLAIFGDS*TLLNVF Trigger: AAAAACATTGAGAAGAGTCCAACTGTCACCAAAGAT...AGCCAATCCTGGGTCCTGTGCCACTCCTACAAATGCTCCAAACTCTGTCCTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR TCA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTACACATGATCTTTGGTaGCAGTTGGACTCTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: GDCRGSGTYELLFLVMGITHDLW*QLDSSQ Trigger: TTGAGAAGAGTCCAACTGTCACCAAAGATCATGTGT...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR TCA 90 bp | AGGTACAAAGTATATTTGGAGAATGCCCTGCTTCACCTGCATGTTAATGGAAATGTAGCTCCCCACACATaGTCTTTGGTGACAGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RYKVYLENALLHLHVNGNVAPHT*SLVTVG Trigger: TCCAACTGTCACCAAAGATCATGTGTGGGGAGCTAC...ATTTCCATTAACATGCAGGTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR GCA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTAGTATATTTGGAGAATaGCCTGCTTCACCTGCATGT | + |
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Preference number: 4 (lower is better) Translates to: GDCRGSGTYELLFLVMGISIFGE*PASPAC Trigger: ACATGCAGGTGAAGCAGGGCATTCTCCAAATATACT...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR CCA 90 bp | AGGTACAAAGTATATTTGGAGAATGCCCTGCTTCACCTGCATGTTAATGGAAATATCCAAGCCAACTTCTaGAGCTGCCAGCAATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RYKVYLENALLHLHVNGNIQANF*SCQQLL Trigger: AAGCAATTGCTGGCAGCTCCAGAAGTTGGCTTGGAT...ATTTCCATTAACATGCAGGTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR GCA 90 bp | AGGTACAAAGTATATTTGGAGAATGCCCTGCTTCACCTGCATGTTAATGGAAATATTTGGAGAATGCCCTaGTTCACCTGCATGTTAATG | + |
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Preference number: 4 (lower is better) Translates to: RYKVYLENALLHLHVNGNIWRMP*FTCMLM Trigger: CATTAACATGCAGGTGAAGCAGGGCATTCTCCAAAT...ATTTCCATTAACATGCAGGTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR GCA 90 bp | AGGTACAAAGTATATTTGGAGAATGCCCTGCTTCACCTGCATGTTAATGGAAATAGAATGGATTCCTCATaGCTTCGATCTTTCATTTCA | + |
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Preference number: 4 (lower is better) Translates to: RYKVYLENALLHLHVNGNRMDSS*LRSFIS Trigger: TGAAATGAAAGATCGAAGGCATGAGGAATCCATTCT...ATTTCCATTAACATGCAGGTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR CAA 90 bp | TTGAGGACAGAGTTTGGAGCATTTGTAGGAGTGGCACAGGACCCAGGATTGGCTATCTCCAGACTTTTGTaGGACTCTTCGGTGACACCG | + |
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Preference number: 5 (lower is better) Translates to: LRTEFGAFVGVAQDPGLAISRLL*DSSVTP Trigger: CGGTGTCACCGAAGAGTCCAACAAAAGTCTGGAGAT...AGCCAATCCTGGGTCCTGTGCCACTCCTACAAATGCTCCAAACTCTGTCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS TCA 90 bp | TCAGAGGAATTCCAGGCTTCTCAAAGTTTGAAGACAGAGATCCCATaGCCTGGGACACAGCTGGGACTTGAGATCTCTGTCCTCGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SEEFQASQSLKTEIP*PGTQLGLEISVLAE Trigger: TTCAGCGAGGACAGAGATCTCAAGTCCCAGCTGTGTCCCAGGTCATGGGATCTCTGTCTTCAAACTTTGAGAAGCCTGGAATTCCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603640.6 |
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| CDS-3UTR CAA 90 bp | TTGAGGACAGAGTTTGGAGCATTTGTAGGAGTGGCACAGGACCCAGGATTGGCTTCTTCTCAATGTTTTTaGTCCTGTCTTGGGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: LRTEFGAFVGVAQDPGLASSQCF*SCLGSL Trigger: CAGTGACCCAAGACAGGACAAAAAACATTGAGAAGA...AGCCAATCCTGGGTCCTGTGCCACTCCTACAAATGCTCCAAACTCTGTCCTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR CAA 90 bp | TTGAGGACAGAGTTTGGAGCATTTGTAGGAGTGGCACAGGACCCAGGATTGGCTAGGTACAAAGTATATTaGGAGAATGCCCTGCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: LRTEFGAFVGVAQDPGLARYKVY*ENALLH Trigger: GTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT...AGCCAATCCTGGGTCCTGTGCCACTCCTACAAATGCTCCAAACTCTGTCCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR CAA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTGCCTTTTTCAGGGGATaGCAGAGGTTCAGGAACCTA | + |
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Preference number: 5 (lower is better) Translates to: GDCRGSGTYELLFLVMGIAFFRG*QRFRNL Trigger: TAGGTTCCTGAACCTCTGCAATCCCCTGAAAAAGGC...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS GCA 90 bp | TCTTGGGTCACTGTCTCAGCCTTAGAAAGGAGAATGGATTCCTCATaGCTTCGATCTTTCATTTCAGGGTTAATCCAGTGCAGAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: SWVTVSALERRMDSS*LRSFISGLIQCRNS Trigger: GCTGTTTCTGCACTGGATTAACCCTGAAATGAAAGATCGAAGGCATGAGGAATCCATTCTCCTTTCTAAGGCTGAGACAGTGACCCAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340783.11 ENST00000603640.6 |
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| CDS GCA 90 bp | ATGGATTCCTCATGCCTTCGATCTTTCATTTCAGGGTTAATCCAGTaGAGAAACAGCTTCATCTTGTTATCCAAGCCAACTTCTGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: MDSSCLRSFISGLIQ*RNSFILLSKPTSGA Trigger: AGCTCCAGAAGTTGGCTTGGATAACAAGATGAAGCTGTTTCTGCACTGGATTAACCCTGAAATGAAAGATCGAAGGCATGAGGAATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340783.11 ENST00000603640.6 |
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| CDS-3UTR CAA 90 bp | AGGTACAAAGTATATTTGGAGAATGCCCTGCTTCACCTGCATGTTAATGGAAATCATAACATTGCAGATTaGGCAGCAGGGGTCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: RYKVYLENALLHLHVNGNHNIAD*AAGVCT Trigger: TGTGCAGACCCCTGCTGCCAAATCTGCAATGTTATG...ATTTCCATTAACATGCAGGTGAAGCAGGGCATTCTCCAAATATACTTTGTACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS-3UTR CAA 90 bp | GGGGATTGCAGAGGTTCAGGAACCTATGAACTCCTTTTTCTTGTGATGGGTATTAGAAACAGCTTCATCTaGTTATCCAAGCCAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: GDCRGSGTYELLFLVMGIRNSFI*LSKPTS Trigger: AGAAGTTGGCTTGGATAACAAGATGAAGCTGTTTCT...AATACCCATCACAAGAAAAAGGAGTTCATAGGTTCCTGAACCTCTGCAATCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS TCA 72 bp | TTCCAGGCTTCTCAAAGTTTGAAGACAGAGATCCCATaGCCTGGGACACAGCTGGGACTTGAGATCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: FQASQSLKTEIP*PGTQLGLEISV Trigger: GACAGAGATCTCAAGTCCCAGCTGTGTCCCAGGTCATGGGATCTCTGTCTTCAAACTTTGAGAAGCCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603640.6 |
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| CDS CAA 90 bp | AAGCCAACTTCTGGAGCTTCTTGGTTCTCCAGGACAAATTTGGAGTaGTTTTTCGTCCTCTCCTGCTGGCTCAGAGGAATTCCAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KPTSGASWFSRTNLE*FFVLSCWLRGIPGF Trigger: GAAGCCTGGAATTCCTCTGAGCCAGCAGGAGAGGACGAAAAACAACTCCAAATTTGTCCTGGAGAACCAAGAAGCTCCAGAAGTTGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000603640.6 |
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| CDS CAA 90 bp | CGATCTTTCATTTCAGGGTTAATCCAGTGCAGAAACAGCTTCATCTaGTTATCCAAGCCAACTTCTGGAGCTTCTTGGTTCTCCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: RSFISGLIQCRNSFI*LSKPTSGASWFSRT Trigger: TGTCCTGGAGAACCAAGAAGCTCCAGAAGTTGGCTTGGATAACAAGATGAAGCTGTTTCTGCACTGGATTAACCCTGAAATGAAAGATCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603640.6 |
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| CDS CAA 72 bp | ATTTCAGGGTTAATCCAGTGCAGAAACAGCTTCATCTaGTTATCCAAGCCAACTTCTGGAGCTGCCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: ISGLIQCRNSFI*LSKPTSGAASN Trigger: ATTGCTGGCAGCTCCAGAAGTTGGCTTGGATAACAAGATGAAGCTGTTTCTGCACTGGATTAACCCTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS CAA 90 bp | CGATCTTTCATTTCAGGGTTAATCCAGTGCAGAAACAGCTTCATCTaGTTATCCAAGCCAACTTCTGGAGCTGCCAGCAATTGCTTAATC | + |
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Preference number: 6 (lower is better) Translates to: RSFISGLIQCRNSFI*LSKPTSGAASNCLI Trigger: GATTAAGCAATTGCTGGCAGCTCCAGAAGTTGGCTTGGATAACAAGATGAAGCTGTTTCTGCACTGGATTAACCCTGAAATGAAAGATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340783.11 |
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| CDS CAA 72 bp | ATTTCAGGGTTAATCCAGTGCAGAAACAGCTTCATCTaGTTATCCAAGCCAACTTCTGGAGCTTCTTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: ISGLIQCRNSFI*LSKPTSGASWF Trigger: GAACCAAGAAGCTCCAGAAGTTGGCTTGGATAACAAGATGAAGCTGTTTCTGCACTGGATTAACCCTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603640.6 |
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| CDS GCA 72 bp | TCATGCCTTCGATCTTTCATTTCAGGGTTAATCCAGTaGAGAAACAGCTTCATCTTGTTATCCAAGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: SCLRSFISGLIQ*RNSFILLSKPT Trigger: AGTTGGCTTGGATAACAAGATGAAGCTGTTTCTGCACTGGATTAACCCTGAAATGAAAGATCGAAGGCATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340783.11 ENST00000603640.6 |
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| CDS CAA 72 bp | ATTTCAGGGTTAATCCAGTGCAGAAACAGCTTCATCTaGTTATCCAAGCCAACTTCTGGAGCTTCAGCAATT | + |
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Preference number: 6 (lower is better) Translates to: ISGLIQCRNSFI*LSKPTSGASAI Trigger: AATTGCTGAAGCTCCAGAAGTTGGCTTGGATAACAAGATGAAGCTGTTTCTGCACTGGATTAACCCTGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603592.1 |
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