RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM200B (Homo sapiens)

Ensembl gene IDs: ENSG00000237765

Ensembl transcript IDs: ENST00000422728.3, ENST00000502856.5, ENST00000503600.5, ENST00000503617.1, ENST00000504137.1, ENST00000504823.5, ENST00000505260.5, ENST00000506610.1, ENST00000507305.5, ENST00000507992.5, ENST00000508567.5, ENST00000510032.5, ENST00000510186.5, ENST00000510920.5, ENST00000512855.5, ENST00000513053.5, ENST00000514803.1, ENST00000515430.5, ENST00000515697.5

Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATaGCGTTTCTGGATGGTTACAGCAGTTATGTCAAAATTAGATTTT +
Preference number: 1 (lower is better)
Translates to: HNIHCLSISNVKQHQ*RFWMVTAVMSKLDF
Trigger: AAAATCTAATTTTGACATAACTGCTGTAACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR GCA 90 bp AGACAAAAGCTAGGTAAGATTTTTATTTACTATGATGGGTGTGCTTaGCTGTTCATAAGTTCATTCCAGTCTGGAACACAGGAAGATAAT +
Preference number: 1 (lower is better)
Translates to: RQKLGKIFIYYDGCA*LFISSFQSGTQEDN
Trigger: ATTATCTTCCTGTGTTCCAGACTGGAATGAACTTATGAACAGGCAAGCACACCCATCATAGTAAATAAAAATCTTACCTAGCTTTTGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
3UTR-3UTR GCA 90 bp ACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATGGTGTCAAGCGACCCTCCTaGCACAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: TLLKHQQREATSMPFLDGVKRPS*HSLLSS
Trigger: GCTACTCAGGAGGCTGTGGCAGGAGGGTCGCTTGAC...ACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR TCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGCCTGCCACAGCCTCCTaGGTAGCTGGGACTATAGGT +
Preference number: 2 (lower is better)
Translates to: QYTLLKHQQREATSMPFLPATAS*VAGTIG
Trigger: ACCTATAGTCCCAGCTACTCAGGAGGCTGTGGCAGG...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR GCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTGTCAAGCGACCCTCCTaGCACAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRVKRPS*HSLLSS
Trigger: GCTACTCAGGAGGCTGTGGCAGGAGGGTCGCTTGAC...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR GCA 90 bp ACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATGGTAGGGTTTCACTCTGTTaGTCAGGCTGGACTGCAGTG +
Preference number: 2 (lower is better)
Translates to: TLLKHQQREATSMPFLDGRVSLC*SGWTAV
Trigger: CACTGCAGTCCAGCCTGAGCAACAGAGTGAAACCCT...ACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR CAA 90 bp ACAAAAGCCAGAGGCCCAATAATGGTCTACAGAACCCTTCATGGTTaGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTACTCTTTC +
Preference number: 2 (lower is better)
Translates to: TKARGPIMVYRTLHG*VPQYFPDLPSYYSF
Trigger: GAAAGAGTAGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGTAGACCATTATTGGGCCTCTGGCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR TCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGGCAACTTCAAACTCCTaGGGTCAAGCGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWATSNS*GQATLL
Trigger: CAGGAGGGTCGCTTGACCTCAGGAGTTTGAAGTTGC...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR GCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGCATGGCCTGCCAAAGTaGGGGGATTACAGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: QYTLLKHQQREATSMPFLHGLPK*GDYRSE
Trigger: CTCAGACCTGTAATCCCCGCACTTTGGCAGGCCATG...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR TCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTGCCCAGGATGGTCTTaGACTCCTGGGCTCAACAGA +
Preference number: 2 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRCPGWS*TPGLNR
Trigger: TCTGTTGAGCCCAGGAGTTCAAGACCATCCTGGGCA...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR TCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGTGTTCTCTAGTCCACTaGCAAAAGCCAGAGGCCCAA +
Preference number: 2 (lower is better)
Translates to: QYTLLKHQQREATSMPFLCSLVH*QKPEAQ
Trigger: TTGGGCCTCTGGCTTTTGTCAGTGGACTAGAGAACA...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR GCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTAAGGGTTTCACTCTGTTaGTCAGGCTGGACTGCAGTG +
Preference number: 2 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLRVSLC*SGWTAV
Trigger: CACTGCAGTCCAGCCTGAGCAACAGAGTGAAACCCT...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR CCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGATGGTCTTGAACTCCTaGGCTCAACAGAGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: QYTLLKHQQREATSMPFLMVLNS*AQQSLL
Trigger: CAGAAGGCTCTGTTGAGCCCAGGAGTTCAAGACCAT...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR GCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGTTGCTCAGGCTGGACTaGAGTGGTGCAATCATAGAT +
Preference number: 2 (lower is better)
Translates to: QYTLLKHQQREATSMPFLLLRLD*SGAIID
Trigger: ATCTATGATTGCACCACTGCAGTCCAGCCTGAGCAA...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR CCA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTGTGTCGAAAAGCAAATaGATCTTTTACCCAACTGTT +
Preference number: 2 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTVSKSK*IFYPTV
Trigger: AACAGTTGGGTAAAAGATCCATTTGCTTTTCGACAC...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504137.1
3UTR-3UTR GCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTATTGCTCAGGCTGGACTaGAGTGGTGCAATCATAGAT +
Preference number: 2 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLLLRLD*SGAIID
Trigger: ATCTATGATTGCACCACTGCAGTCCAGCCTGAGCAA...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR GCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGGCAATCATAGATGACTaGAACTTCAAACTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWAIIDD*NFKLLR
Trigger: CCTCAGGAGTTTGAAGTTGCAGTCATCTATGATTGC...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR GCA 90 bp ACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATGGTACTCTTGGGAATGACTaGAAATTAGAGATGTTAGGT +
Preference number: 2 (lower is better)
Translates to: TLLKHQQREATSMPFLDGTLGND*KLEMLG
Trigger: ACCTAACATCTCTAATTTGCAGTCATTCCCAAGAGT...ACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR GCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTGCAATCATAGATGACTaGAACTTCAAACTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRAIIDD*NFKLLR
Trigger: CCTCAGGAGTTTGAAGTTGCAGTCATCTATGATTGC...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR CCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGTATGTATCAGGCAAATaGATATCACCTCCCCTACTA +
Preference number: 2 (lower is better)
Translates to: QYTLLKHQQREATSMPFLYVSGK*ISPPLL
Trigger: TAGTAGGGGAGGTGATATCCATTTGCCTGATACATA...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR CCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTATGTATCAGGCAAATaGATATCACCTCCCCTACTA +
Preference number: 2 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRYVSGK*ISPPLL
Trigger: TAGTAGGGGAGGTGATATCCATTTGCCTGATACATA...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR CCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTAAATGCCGTTTCTGGATaGTTACAGCAGTTATGTCAA +
Preference number: 2 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLNAVSG*LQQLCQ
Trigger: TTGACATAACTGCTGTAACCATCCAGAAACGGCATT...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR CCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTAAATAATATCACCCAGTaGGATAAGGGAGTACACAGA +
Preference number: 2 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLNNITQ*DKGVHR
Trigger: TCTGTGTACTCCCTTATCCCACTGGGTGATATTATT...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR CCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGTTAACTGCGTTAAGATaGAAAACCCTAGTTCACACA +
Preference number: 2 (lower is better)
Translates to: QYTLLKHQQREATSMPFLLTALR*KTLVHT
Trigger: TGTGTGAACTAGGGTTTTCCATCTTAACGCAGTTAA...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504137.1
3UTR-3UTR CCA 90 bp AAGATGGAAAACCCTAGTTCACACAAACTAGTTGTTGTGAATGGTAGCAATAGCGTGTCGAAAAGCAAATaGATCTTTTACCCAACTGTT +
Preference number: 2 (lower is better)
Translates to: KMENPSSHKLVVVNGSNSVSKSK*IFYPTV
Trigger: AACAGTTGGGTAAAAGATCCATTTGCTTTTCGACAC...GCTATTGCTACCATTCACAACAACTAGTTTGTGTGAACTAGGGTTTTCCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
3UTR GCA 72 bp CATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATaGCGTTTCTGGATGGTTACAGCAGTTATGTCAAAA +
Preference number: 3 (lower is better)
Translates to: HCLSISNVKQHQ*RFWMVTAVMSK
Trigger: TTTTGACATAACTGCTGTAACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR GCA 72 bp CTAGGTAAGATTTTTATTTACTATGATGGGTGTGCTTaGCTGTTCATAAGTTCATTCCAGTCTGGAACACAG +
Preference number: 3 (lower is better)
Translates to: LGKIFIYYDGCA*LFISSFQSGTQ
Trigger: CTGTGTTCCAGACTGGAATGAACTTATGAACAGGCAAGCACACCCATCATAGTAAATAAAAATCTTACCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
3UTR CCA 72 bp AGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTaGATGGTTACAGCAGTTATGTCAAAATTAGATTTT +
Preference number: 3 (lower is better)
Translates to: SISNVKQHQCRF*MVTAVMSKLDF
Trigger: AAAATCTAATTTTGACATAACTGCTGTAACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR CAA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTAAGGGAATTACCTGTTTaGTTCACTTTTGTATCCCAA +
Preference number: 3 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLRELPV*FTFVSQ
Trigger: TTGGGATACAAAAGTGAACAAAACAGGTAATTCCCT...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR-3UTR CAA 90 bp AAGATGGAAAACCCTAGTTCACACAAACTAGTTGTTGTGAATGGTAGCAATAGCAGTTTAGCTCAATTATaGATTCAGGGTGTCGAAAAG +
Preference number: 3 (lower is better)
Translates to: KMENPSSHKLVVVNGSNSSLAQL*IQGVEK
Trigger: CTTTTCGACACCCTGAATCAATAATTGAGCTAAACT...GCTATTGCTACCATTCACAACAACTAGTTTGTGTGAACTAGGGTTTTCCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS-3UTR TCA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTCCTGGAATGCATCCTTaGCCTCCAGCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTPGMHP*PPAQPQ
Trigger: CTGCGGCTGGGCTGGAGGTCAAGGATGCATTCCAGG...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR GCA 90 bp ACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATGGTGGCCGGGCCCAGCGCTaGAAGCCTCAGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLLKHQQREATSMPFLDGGRAQR*KPQVSP
Trigger: TGGAGAGACCTGAGGCTTGCAGCGCTGGGCCCGGCC...ACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR GCA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTCTCAACAGAGCCTTCTaGCATGGCCTGCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTLNRAF*HGLPKC
Trigger: GCACTTTGGCAGGCCATGGCAGAAGGCTCTGTTGAG...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTAGGGTTTCACTCTGTTaGTCAGGCTGGACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTRVSLC*SGWTAV
Trigger: CACTGCAGTCCAGCCTGAGCAACAGAGTGAAACCCT...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTAACTGGATCGGCCCTCTaGGCATGCGTGAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLTGSAL*ACVRPG
Trigger: CCCCGGTCTCACGCATGCGCAGAGGGCCGATCCAGT...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR TCA 90 bp TCACACAAACTAGTTGTTGTGAATGGTAGCAATAGCAGGACACTCTTTCTACTTCCTGGAATGCATCCTTaGCCTCCAGCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SHKLVVVNGSNSRTLFLLPGMHP*PPAQPQ
Trigger: CTGCGGCTGGGCTGGAGGTCAAGGATGCATTCCAGG...AAGTAGAAAGAGTGTCCTGCTATTGCTACCATTCACAACAACTAGTTTGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505260.5
CDS-3UTR GCA 90 bp AAGTTTAGCTCAATTATTGATTCAGGGTGTCGAAAAGCAAATGGATCTTTTACCGGCCGGGCCCAGCGCTaGAAGCCTCAGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KFSSIIDSGCRKANGSFTGRAQR*KPQVSP
Trigger: TGGAGAGACCTGAGGCTTGCAGCGCTGGGCCCGGCC...GGTAAAAGATCCATTTGCTTTTCGACACCCTGAATCAATAATTGAGCTAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505260.5
CDS-3UTR GCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGGTCAAGCGACCCTCCTaGCACAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWVKRPS*HSLLSS
Trigger: GCTACTCAGGAGGCTGTGGCAGGAGGGTCGCTTGAC...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
3UTR CAA 72 bp AGAGGCCCAATAATGGTCTACAGAACCCTTCATGGTTaGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: RGPIMVYRTLHG*VPQYFPDLPSY
Trigger: GTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGTAGACCATTATTGGGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp TATGAAGAACTAAGCTGCAATAATTCATTCTCTTCTTCAGGCACCAAGTTTAGCGCAGAGCTGCGCCTCTaGTCTCCCCACACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: YEELSCNNSFSSSGTKFSAELRL*SPHTSL
Trigger: GAGGGAAGTGTGGGGAGAGCAGAGGCGCAGCTCTGC...GCTAAACTTGGTGCCTGAAGAAGAGAATGAATTATTGCAGCTTAGTTCTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505260.5
CDS-3UTR TCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGTGCCCAGGATGGTCTTaGACTCCTGGGCTCAACAGA +
Preference number: 4 (lower is better)
Translates to: QYTLLKHQQREATSMPFLCPGWS*TPGLNR
Trigger: TCTGTTGAGCCCAGGAGTTCAAGACCATCCTGGGCA...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGCAACTTCAAACTCCTaGGGTCAAGCGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QYTLLKHQQREATSMPFLATSNS*GQATLL
Trigger: CAGGAGGGTCGCTTGACCTCAGGAGTTTGAAGTTGC...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CCA 90 bp ACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATGGTATGGTCTTGAACTCCTaGGCTCAACAGAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TLLKHQQREATSMPFLDGMVLNS*AQQSLL
Trigger: CAGAAGGCTCTGTTGAGCCCAGGAGTTCAAGACCAT...ACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp TCACACAAACTAGTTGTTGTGAATGGTAGCAATAGCAGGACACTCTTTCTACTTTGCCCAGGATGGTCTTaGACTCCTGGGCTCAACAGA +
Preference number: 4 (lower is better)
Translates to: SHKLVVVNGSNSRTLFLLCPGWS*TPGLNR
Trigger: TCTGTTGAGCCCAGGAGTTCAAGACCATCCTGGGCA...AAGTAGAAAGAGTGTCCTGCTATTGCTACCATTCACAACAACTAGTTTGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR GCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTCTCAACAGAGCCTTCTaGCATGGCCTGCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRLNRAF*HGLPKC
Trigger: GCACTTTGGCAGGCCATGGCAGAAGGCTCTGTTGAG...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp GGTAAGATTTTTATTTACTATGATGGGTGTGCTTGCCTGTTCATAAGTTCATTCGTCAAGCGACCCTCCTaGCACAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GKIFIYYDGCACLFISSFVKRPS*HSLLSS
Trigger: GCTACTCAGGAGGCTGTGGCAGGAGGGTCGCTTGAC...GAATGAACTTATGAACAGGCAAGCACACCCATCATAGTAAATAAAAATCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR CCA 90 bp TATGAAGAACTAAGCTGCAATAATTCATTCTCTTCTTCAGGCACCAAGTTTAGCCCAGCCGAAAAGAACTaGATCGGCCCTCTGCGCATG +
Preference number: 4 (lower is better)
Translates to: YEELSCNNSFSSSGTKFSPAEKN*IGPLRM
Trigger: CATGCGCAGAGGGCCGATCCAGTTCTTTTCGGCTGG...GCTAAACTTGGTGCCTGAAGAAGAGAATGAATTATTGCAGCTTAGTTCTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR TCA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTCCAGGAATCAATGACTaGAAACCATTTCTTAGCCAA +
Preference number: 4 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTPGIND*KPFLSQ
Trigger: TTGGCTAAGAAATGGTTTTCAGTCATTGATTCCTGG...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGTGTTCTCTAGTCCACTaGCAAAAGCCAGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWCSLVH*QKPEAQ
Trigger: TTGGGCCTCTGGCTTTTGTCAGTGGACTAGAGAACA...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp AATGTATATGAAGAACTAAGCTGCAATAATTCATTCTCTTCTTCAGGCACCAAGCCTGCCACAGCCTCCTaGGTAGCTGGGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: NVYEELSCNNSFSSSGTKPATAS*VAGTIG
Trigger: ACCTATAGTCCCAGCTACTCAGGAGGCTGTGGCAGG...CTTGGTGCCTGAAGAAGAGAATGAATTATTGCAGCTTAGTTCTTCATATACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR GCA 90 bp TCACACAAACTAGTTGTTGTGAATGGTAGCAATAGCAGGACACTCTTTCTACTTAGGGTTTCACTCTGTTaGTCAGGCTGGACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SHKLVVVNGSNSRTLFLLRVSLC*SGWTAV
Trigger: CACTGCAGTCCAGCCTGAGCAACAGAGTGAAACCCT...AAGTAGAAAGAGTGTCCTGCTATTGCTACCATTCACAACAACTAGTTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR CCA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTTCTGTGGAATTTCTCTaGATGCTAAACCTTCACGAT +
Preference number: 4 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTSVEFL*MLNLHD
Trigger: ATCGTGAAGGTTTAGCATCCAGAGAAATTCCACAGA...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR TCA 90 bp ACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATGGTATCATTTTTATGGTCTaGTCCAGTGAGGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: TLLKHQQREATSMPFLDGIIFMV*SSEEPM
Trigger: CATTGGCTCCTCACTGGATCAGACCATAAAAATGAT...ACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTTTTTCAATACCTCCATaGGATTCTGTGGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTFSIPP*DSVEFL
Trigger: GAGAAATTCCACAGAATCTCATGGAGGTATTGAAAA...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR TCA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTAAATGGTTAAAAGTTTaGGACAGAGAAGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTKWLKV*DREVRC
Trigger: GCATCTCACTTCTCTGTCTCAAACTTTTAACCATTT...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR TCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTATGTTCTCTAGTCCACTaGCAAAAGCCAGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLCSLVH*QKPEAQ
Trigger: TTGGGCCTCTGGCTTTTGTCAGTGGACTAGAGAACA...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp GCTTGCCTGTTCATAAGTTCATTCCAGTCTGGAACACAGGAAGATAATGCTACCGCATTCCTTGCAATGTaGACAATTCAGGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: ACLFISSFQSGTQEDNATAFLAM*TIQAKD
Trigger: ATCCTTTGCCTGAATTGTGCACATTGCAAGGAATGC...GGTAGCATTATCTTCCTGTGTTCCAGACTGGAATGAACTTATGAACAGGCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR GCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGGACCTCAGCATTCCTTaGAATGTGCACAATTCAGGC +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWDLSIP*NVHNSG
Trigger: GCCTGAATTGTGCACATTGCAAGGAATGCTGAGGTC...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTAAACTAAAAGTGTTGTaGAGCTTCCAATATCAGTGC +
Preference number: 4 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTKLKVL*SFQYQC
Trigger: GCACTGATATTGGAAGCTGCACAACACTTTTAGTTT...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR GCA 90 bp AATGTATATGAAGAACTAAGCTGCAATAATTCATTCTCTTCTTCAGGCACCAAGCATGGCCTGCCAAAGTaGGGGGATTACAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: NVYEELSCNNSFSSSGTKHGLPK*GDYRSE
Trigger: CTCAGACCTGTAATCCCCGCACTTTGGCAGGCCATG...CTTGGTGCCTGAAGAAGAGAATGAATTATTGCAGCTTAGTTCTTCATATACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR GCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGTTGCTCAGGCTGGACTaGAGTGGTGCAATCATAGAT +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWLLRLD*SGAIID
Trigger: ATCTATGATTGCACCACTGCAGTCCAGCCTGAGCAA...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTATGGTCTTGAACTCCTaGGCTCAACAGAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRMVLNS*AQQSLL
Trigger: CAGAAGGCTCTGTTGAGCCCAGGAGTTCAAGACCAT...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTCCTGGAATGCATCCTTaGCCTCACAAATTCCCCATT +
Preference number: 4 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRPGMHP*PHKFPI
Trigger: AATGGGGAATTTGTGAGGTCAAGGATGCATTCCAGG...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR GCA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTCAGGCAAAGGATTCATaGAAAACACTTTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTQAKDS*KTLWYF
Trigger: AAAATACCAAAGTGTTTTGCATGAATCCTTTGCCTG...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp ACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATGGTTATGATGGGTGTGCTTaGCTGTTCATAAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: TLLKHQQREATSMPFLDGYDGCA*LFISSF
Trigger: GAATGAACTTATGAACAGGCAAGCACACCCATCATA...ACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp AGCAATAGCAGGACACTCTTTCTACTTAACAATGGAAAGTCTTCCTTTACCTTCTTGCTCAGGCTGGACTaGAGTGGTGCAATCATAGAT +
Preference number: 4 (lower is better)
Translates to: SNSRTLFLLNNGKSSFTFLLRLD*SGAIID
Trigger: ATCTATGATTGCACCACTGCAGTCCAGCCTGAGCAA...GAAGGTAAAGGAAGACTTTCCATTGTTAAGTAGAAAGAGTGTCCTGCTATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR TCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGATCATTTTTATGGTCTaGTCCAGTGAGGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: QYTLLKHQQREATSMPFLIIFMV*SSEEPM
Trigger: CATTGGCTCCTCACTGGATCAGACCATAAAAATGAT...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGGCATTCCTTGCAATGTaGACAATTCAGGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWAFLAM*TIQAKD
Trigger: ATCCTTTGCCTGAATTGTGCACATTGCAAGGAATGC...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp AATGGTAGCAATAGCAGGACACTCTTTCTACTTAACAATGGAAAGTCTTCCTTTGACCTCAGCATTCCTTaGAATGTGCACAATTCAGGC +
Preference number: 4 (lower is better)
Translates to: NGSNSRTLFLLNNGKSSFDLSIP*NVHNSG
Trigger: GCCTGAATTGTGCACATTGCAAGGAATGCTGAGGTC...AAAGGAAGACTTTCCATTGTTAAGTAGAAAGAGTGTCCTGCTATTGCTACCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR CCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTACTACAGAACCCTTCATaGTTTGGTTCCCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLLQNPS*FGSPVL
Trigger: AAGTACTGGGGAACCAAACCATGAAGGGTTCTGTAG...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CCA 90 bp AGCAATAGCAGGACACTCTTTCTACTTAACAATGGAAAGTCTTCCTTTACCTTCCTACAGAACCCTTCATaGTTTGGTTCCCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: SNSRTLFLLNNGKSSFTFLQNPS*FGSPVL
Trigger: AAGTACTGGGGAACCAAACCATGAAGGGTTCTGTAG...GAAGGTAAAGGAAGACTTTCCATTGTTAAGTAGAAAGAGTGTCCTGCTATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR GCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTGACATTTTGTGCCTTTaGTGTGTTGGTACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRDILCL*CVGTLS
Trigger: ACTCAAGGTACCAACACAGCAAAGGCACAAAATGTC...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp AGCAATAGCAGGACACTCTTTCTACTTAACAATGGAAAGTCTTCCTTTACCTTCGACATTTTGTGCCTTTaGTGTGTTGGTACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SNSRTLFLLNNGKSSFTFDILCL*CVGTLS
Trigger: ACTCAAGGTACCAACACAGCAAAGGCACAAAATGTC...GAAGGTAAAGGAAGACTTTCCATTGTTAAGTAGAAAGAGTGTCCTGCTATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR GCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGACAGAATTGATTTCATaGCTCACTAATGGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: QYTLLKHQQREATSMPFLTELIS*LTNGSH
Trigger: GTGAGACCCATTAGTGAGGCATGAAATCAATTCTGT...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGTTTTCCAGTCATGGTTaGTGTGCCATCACTTGTAAT +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWFSSHG*CAITCN
Trigger: ATTACAAGTGATGGCACAGCAACCATGACTGGAAAA...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR GCA 90 bp AGCAATAGCAGGACACTCTTTCTACTTAACAATGGAAAGTCTTCCTTTACCTTCGCAATCATAGATGACTaGAACTTCAAACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SNSRTLFLLNNGKSSFTFAIIDD*NFKLLR
Trigger: CCTCAGGAGTTTGAAGTTGCAGTCATCTATGATTGC...GAAGGTAAAGGAAGACTTTCCATTGTTAAGTAGAAAGAGTGTCCTGCTATTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR CCA 90 bp ACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATGGTACAACCAACGAATTTTaGTATGATATAGTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: TLLKHQQREATSMPFLDGTTNEF*YDIVSG
Trigger: CCCACTTACTATATCATACCAAAATTCGTTGGTTGT...ACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR CCA 90 bp CAGGCACCAAGTTTAGCTCAATTATTGATTCAGGGTGTCGAAAAGCAAATGGATTATGTATCAGGCAAATaGATATCACCTCCCCTACTA +
Preference number: 4 (lower is better)
Translates to: QAPSLAQLLIQGVEKQMDYVSGK*ISPPLL
Trigger: TAGTAGGGGAGGTGATATCCATTTGCCTGATACATA...ATCCATTTGCTTTTCGACACCCTGAATCAATAATTGAGCTAAACTTGGTGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR CCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGAATGCCGTTTCTGGATaGTTACAGCAGTTATGTCAA +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWNAVSG*LQQLCQ
Trigger: TTGACATAACTGCTGTAACCATCCAGAAACGGCATT...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGAATGCCGTTTCTGGATaGTTACAGCAGTTATGTCAA +
Preference number: 4 (lower is better)
Translates to: QYTLLKHQQREATSMPFLNAVSG*LQQLCQ
Trigger: TTGACATAACTGCTGTAACCATCCAGAAACGGCATT...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTATTAACCGTGCTATTATaGAAATCAAGCAAGACACCC +
Preference number: 4 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLLTVLL*KSSKTP
Trigger: GGGTGTCTTGCTTGATTTTCATAATAGCACGGTTAA...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATAAGTTCAGCATGCTaGGTTTCTAAGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWISSAC*VSKCLF
Trigger: AAAAAGGCACTTAGAAACTCAGCATGCTGAACTTAT...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR TCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATTTTTATTTACTATaGTGGGTGTGCTTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: QYTLLKHQQREATSMPFLDFYLL*WVCLPV
Trigger: AACAGGCAAGCACACCCATCATAGTAAATAAAAATC...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp CAGGCACCAAGTTTAGCTCAATTATTGATTCAGGGTGTCGAAAAGCAAATGGATGATTTTTATTTACTATaGTGGGTGTGCTTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: QAPSLAQLLIQGVEKQMDDFYLL*WVCLPV
Trigger: AACAGGCAAGCACACCCATCATAGTAAATAAAAATC...ATCCATTTGCTTTTCGACACCCTGAATCAATAATTGAGCTAAACTTGGTGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS-3UTR GCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTATGATGGGTGTGCTTaGCTGTTCATAAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRYDGCA*LFISSF
Trigger: GAATGAACTTATGAACAGGCAAGCACACCCATCATA...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR GCA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGACTCTTGGGAATGACTaGAAATTAGAGATGTTAGGT +
Preference number: 4 (lower is better)
Translates to: QYTLLKHQQREATSMPFLTLGND*KLEMLG
Trigger: ACCTAACATCTCTAATTTGCAGTCATTCCCAAGAGT...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGGTGCTTTCATCAAGCTaGATTGCAAAATCTATACCA +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWVLSSS*IAKSIP
Trigger: TGGTATAGATTTTGCAATCCAGCTTGATGAAAGCAC...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR CCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGGTGTCGAAAAGCAAATaGATCTTTTACCCAACTGTT +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWVSKSK*IFYPTV
Trigger: AACAGTTGGGTAAAAGATCCATTTGCTTTTCGACAC...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTAATAATATCACCCAGTaGGATAAGGGAGTACACAGA +
Preference number: 4 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRNNITQ*DKGVHR
Trigger: TCTGTGTACTCCCTTATCCCACTGGGTGATATTATT...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp GGTAAGATTTTTATTTACTATGATGGGTGTGCTTGCCTGTTCATAAGTTCATTCATCATTTTTATGGTCTaGTCCAGTGAGGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: GKIFIYYDGCACLFISSFIIFMV*SSEEPM
Trigger: CATTGGCTCCTCACTGGATCAGACCATAAAAATGAT...GAATGAACTTATGAACAGGCAAGCACACCCATCATAGTAAATAAAAATCTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS-3UTR TCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTACTTAGTATTTTCCCTTaGGACAACCAACGAATTTTG +
Preference number: 4 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLLSIFP*DNQRIL
Trigger: CAAAATTCGTTGGTTGTCTCAAGGGAAAATACTAAG...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR TCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTTGAGACAGAGAAGTaGGATGCAACAATATCTCTA +
Preference number: 4 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRFETEK*DATISL
Trigger: TAGAGATATTGTTGCATCTCACTTCTCTGTCTCAAA...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR GCA 90 bp GAACTAAGCTGCAATAATTCATTCTCTTCTTCAGGCACCAAGTTTAGCTCAATTTATGATGGGTGTGCTTaGCTGTTCATAAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: ELSCNNSFSSSGTKFSSIYDGCA*LFISSF
Trigger: GAATGAACTTATGAACAGGCAAGCACACCCATCATA...AATTGAGCTAAACTTGGTGCCTGAAGAAGAGAATGAATTATTGCAGCTTAGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS-3UTR GCA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGTTACACAATATACATTaGTTAAGCATCAGCAACGTG +
Preference number: 4 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWLHNIH*LSISNV
Trigger: CACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CCA 90 bp ATAGCAGGACACTCTTTCTACTTAACAATGGAAAGTCTTCCTTTACCTTCATCCGTGTCGAAAAGCAAATaGATCTTTTACCCAACTGTT +
Preference number: 4 (lower is better)
Translates to: IAGHSFYLTMESLPLPSSVSKSK*IFYPTV
Trigger: AACAGTTGGGTAAAAGATCCATTTGCTTTTCGACAC...GGATGAAGGTAAAGGAAGACTTTCCATTGTTAAGTAGAAAGAGTGTCCTGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS-3UTR CCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTATTAACTGCGTTAAGATaGAAAACCCTAGTTCACACA +
Preference number: 4 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLLTALR*KTLVHT
Trigger: TGTGTGAACTAGGGTTTTCCATCTTAACGCAGTTAA...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTAACTGCGTTAAGATaGAAAACCCTAGTTCACACA +
Preference number: 4 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRLTALR*KTLVHT
Trigger: TGTGTGAACTAGGGTTTTCCATCTTAACGCAGTTAA...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR TCA 90 bp ATTTTTATTTACTATGATGGGTGTGCTTGCCTGTTCATAAGTTCATTCCAGTCTCCAGGAATCAATGACTaGAAACCATTTCTTAGCCAA +
Preference number: 4 (lower is better)
Translates to: IFIYYDGCACLFISSFQSPGIND*KPFLSQ
Trigger: TTGGCTAAGAAATGGTTTTCAGTCATTGATTCCTGG...AGACTGGAATGAACTTATGAACAGGCAAGCACACCCATCATAGTAAATAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR TCA 90 bp TATGAAGAACTAAGCTGCAATAATTCATTCTCTTCTTCAGGCACCAAGTTTAGCGATTTTTATTTACTATaGTGGGTGTGCTTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: YEELSCNNSFSSSGTKFSDFYLL*WVCLPV
Trigger: AACAGGCAAGCACACCCATCATAGTAAATAAAAATC...GCTAAACTTGGTGCCTGAAGAAGAGAATGAATTATTGCAGCTTAGTTCTTCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS-3UTR GCA 90 bp AGCAATAGCAGGACACTCTTTCTACTTAACAATGGAAAGTCTTCCTTTACCTTCCAGGCAAAGGATTCATaGAAAACACTTTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: SNSRTLFLLNNGKSSFTFQAKDS*KTLWYF
Trigger: AAAATACCAAAGTGTTTTGCATGAATCCTTTGCCTG...GAAGGTAAAGGAAGACTTTCCATTGTTAAGTAGAAAGAGTGTCCTGCTATTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR GCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTACACAATATACATTaGTTAAGCATCAGCAACGTG +
Preference number: 4 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRLHNIH*LSISNV
Trigger: CACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CCA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTCAGTTTAATTTATATTaGCCAACTATGCGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRQFNLY*PTMRLS
Trigger: AGAAAGGCGCATAGTTGGCCAATATAAATTAAACTG...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR CCA 90 bp TGTGTATTGAACACATACTATGTATCAGGCAAATGGATATCACCTCCCCTACTAATGCTGCAAAAATCTTaGAAACATGTAATAGCTAGG +
Preference number: 4 (lower is better)
Translates to: CVLNTYYVSGKWISPPLLMLQKS*KHVIAR
Trigger: CCTAGCTATTACATGTTTCCAAGATTTTTGCAGCAT...TAGTAGGGGAGGTGATATCCATTTGCCTGATACATAGTATGTGTTCAATACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR CCA 90 bp AATGTATATGAAGAACTAAGCTGCAATAATTCATTCTCTTCTTCAGGCACCAAGAATAATATCACCCAGTaGGATAAGGGAGTACACAGA +
Preference number: 4 (lower is better)
Translates to: NVYEELSCNNSFSSSGTKNNITQ*DKGVHR
Trigger: TCTGTGTACTCCCTTATCCCACTGGGTGATATTATT...CTTGGTGCCTGAAGAAGAGAATGAATTATTGCAGCTTAGTTCTTCATATACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR TCA 90 bp AAGTTTAGCTCAATTATTGATTCAGGGTGTCGAAAAGCAAATGGATCTTTTACCGTTATAATTGGCACTTaGGTATGTCTGCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: KFSSIIDSGCRKANGSFTVIIGT*VCLLDD
Trigger: ATCATCAAGCAGACATACTCAAGTGCCAATTATAAC...GGTAAAAGATCCATTTGCTTTTCGACACCCTGAATCAATAATTGAGCTAAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505260.5
CDS-3UTR GCA 90 bp AAGTTTAGCTCAATTATTGATTCAGGGTGTCGAAAAGCAAATGGATCTTTTACCACTCTTGGGAATGACTaGAAATTAGAGATGTTAGGT +
Preference number: 4 (lower is better)
Translates to: KFSSIIDSGCRKANGSFTTLGND*KLEMLG
Trigger: ACCTAACATCTCTAATTTGCAGTCATTCCCAAGAGT...GGTAAAAGATCCATTTGCTTTTCGACACCCTGAATCAATAATTGAGCTAAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR CCA 90 bp AATAATTCATTCTCTTCTTCAGGCACCAAGTTTAGCTCAATTATTGATTCAGGGTTAACTGCGTTAAGATaGAAAACCCTAGTTCACACA +
Preference number: 4 (lower is better)
Translates to: NNSFSSSGTKFSSIIDSGLTALR*KTLVHT
Trigger: TGTGTGAACTAGGGTTTTCCATCTTAACGCAGTTAA...CCCTGAATCAATAATTGAGCTAAACTTGGTGCCTGAAGAAGAGAATGAATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS GCA 90 bp GCCTCACCTCCAGCCCAGCCGCAGCGACCCGGCCGGGCCCAGCGCTaGAAGCCTCAGGTCTCTCCAGCAGAGCTGCGCCTCTGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: ASPPAQPQRPGRAQR*KPQVSPAELRLCSP
Trigger: GGGAGAGCAGAGGCGCAGCTCTGCTGGAGAGACCTGAGGCTTGCAGCGCTGGGCCCGGCCGGGTCGCTGCGGCTGGGCTGGAGGTGAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503617.1
ENST00000507992.5
ENST00000510032.5
ENST00000512855.5
ENST00000513053.5
CDS-3UTR CAA 90 bp ACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATGGTTCCTGGAATGCATCCTaGACCTCCAGCCCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: TLLKHQQREATSMPFLDGSWNAS*TSSPAA
Trigger: TGCGGCTGGGCTGGAGGTCAAGGATGCATTCCAGGA...ACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR CAA 90 bp GAACTAAGCTGCAATAATTCATTCTCTTCTTCAGGCACCAAGTTTAGCTCAATTTCCTGGAATGCATCCTaGACCTCCAGCCCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: ELSCNNSFSSSGTKFSSISWNAS*TSSPAA
Trigger: TGCGGCTGGGCTGGAGGTCAAGGATGCATTCCAGGA...AATTGAGCTAAACTTGGTGCCTGAAGAAGAGAATGAATTATTGCAGCTTAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505260.5
CDS-3UTR CAA 90 bp ACAGAACCCTTCATGGTTTGGTTCCCCAGTACTTCCCTGACCTTCCTTCTTACTCATAAACTAAAAGTGTaGTGCAGCTTCCAATATCAG +
Preference number: 5 (lower is better)
Translates to: TEPFMVWFPSTSLTFLLTHKLKV*CSFQYQ
Trigger: CTGATATTGGAAGCTGCACAACACTTTTAGTTTATG...AGTAAGAAGGAAGGTCAGGGAAGTACTGGGGAACCAAACCATGAAGGGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR CAA 90 bp AATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGTCCTGGAATGCATCCTaGACCTCACAAATTCCCCAT +
Preference number: 5 (lower is better)
Translates to: NIHCLSISNVKQHQCRFWSWNAS*TSQIPH
Trigger: ATGGGGAATTTGTGAGGTCAAGGATGCATTCCAGGA...CCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR CAA 90 bp ACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGATGGTGTTGAAGTTTGCAGATaGGAGTCAGTATTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: TLLKHQQREATSMPFLDGVEVCR*ESVFFS
Trigger: TGAGAAAAATACTGACTCCAATCTGCAAACTTCAAC...ACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CAA 90 bp GCTTGCCTGTTCATAAGTTCATTCCAGTCTGGAACACAGGAAGATAATGCTACCGTTGAAGTTTGCAGATaGGAGTCAGTATTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: ACLFISSFQSGTQEDNATVEVCR*ESVFFS
Trigger: TGAGAAAAATACTGACTCCAATCTGCAAACTTCAAC...GGTAGCATTATCTTCCTGTGTTCCAGACTGGAATGAACTTATGAACAGGCAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS-3UTR CAA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGTGGCTCAAATGAAGTaGAAGTTTGCAGATTGGAGT +
Preference number: 5 (lower is better)
Translates to: QYTLLKHQQREATSMPFLVAQMK*KFADWS
Trigger: ACTCCAATCTGCAAACTTCAACTTCATTTGAGCCAC...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CAA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTGTGGCTCAAATGAAGTaGAAGTTTGCAGATTGGAGT +
Preference number: 5 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRVAQMK*KFADWS
Trigger: ACTCCAATCTGCAAACTTCAACTTCATTTGAGCCAC...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CAA 90 bp TCACACAAACTAGTTGTTGTGAATGGTAGCAATAGCAGGACACTCTTTCTACTTGTGGCTCAAATGAAGTaGAAGTTTGCAGATTGGAGT +
Preference number: 5 (lower is better)
Translates to: SHKLVVVNGSNSRTLFLLVAQMK*KFADWS
Trigger: ACTCCAATCTGCAAACTTCAACTTCATTTGAGCCAC...AAGTAGAAAGAGTGTCCTGCTATTGCTACCATTCACAACAACTAGTTTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS-3UTR CAA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGAGTTTAGCTCAATTATaGATTCAGGGTGTCGAAAAG +
Preference number: 5 (lower is better)
Translates to: QYTLLKHQQREATSMPFLSLAQL*IQGVEK
Trigger: CTTTTCGACACCCTGAATCAATAATTGAGCTAAACT...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CAA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGGCCCATTTCTTTCCTTaGTTTTTAACTGCGTTAAGA +
Preference number: 5 (lower is better)
Translates to: QYTLLKHQQREATSMPFLAHFFP*FLTALR
Trigger: TCTTAACGCAGTTAAAAACAAAGGAAAGAAATGGGC...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CAA 90 bp CAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTTTCTGAGGGAATTACCTGTTTaGTTCACTTTTGTATCCCAA +
Preference number: 5 (lower is better)
Translates to: QYTLLKHQQREATSMPFLRELPV*FTFVSQ
Trigger: TTGGGATACAAAAGTGAACAAAACAGGTAATTCCCT...CAGAAACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CAA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTGTTGAAGTTTGCAGATaGGAGTCAGTATTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRVEVCR*ESVFFS
Trigger: TGAGAAAAATACTGACTCCAATCTGCAAACTTCAAC...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CAA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTGAAATGGTTAAAAGTTaGAGACAGAGAAGTGAGATG +
Preference number: 5 (lower is better)
Translates to: LHNIHCLSISNVKQHQCREMVKS*RQRSEM
Trigger: CATCTCACTTCTCTGTCTCAAACTTTTAACCATTTC...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS-3UTR CAA 90 bp AACTGCGTTAAGATGGAAAACCCTAGTTCACACAAACTAGTTGTTGTGAATGGTAGTTTAGCTCAATTATaGATTCAGGGTGTCGAAAAG +
Preference number: 5 (lower is better)
Translates to: NCVKMENPSSHKLVVVNGSLAQL*IQGVEK
Trigger: CTTTTCGACACCCTGAATCAATAATTGAGCTAAACT...ACCATTCACAACAACTAGTTTGTGTGAACTAGGGTTTTCCATCTTAACGCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS-3UTR CAA 90 bp TTACACAATATACATTGCTTAAGCATCAGCAACGTGAAGCAACATCAATGCCGTGCCCATTTCTTTCCTTaGTTTTTAACTGCGTTAAGA +
Preference number: 5 (lower is better)
Translates to: LHNIHCLSISNVKQHQCRAHFFP*FLTALR
Trigger: TCTTAACGCAGTTAAAAACAAAGGAAAGAAATGGGC...ACGGCATTGATGTTGCTTCACGTTGCTGATGCTTAAGCAATGTATATTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422728.3
ENST00000504137.1
CDS-3UTR CAA 90 bp TATGAAGAACTAAGCTGCAATAATTCATTCTCTTCTTCAGGCACCAAGTTTAGCGCCCATTTCTTTCCTTaGTTTTTAACTGCGTTAAGA +
Preference number: 5 (lower is better)
Translates to: YEELSCNNSFSSSGTKFSAHFFP*FLTALR
Trigger: TCTTAACGCAGTTAAAAACAAAGGAAAGAAATGGGC...GCTAAACTTGGTGCCTGAAGAAGAGAATGAATTATTGCAGCTTAGTTCTTCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS-3UTR CAA 90 bp GAACTAAGCTGCAATAATTCATTCTCTTCTTCAGGCACCAAGTTTAGCTCAATTAGGGAATTACCTGTTTaGTTCACTTTTGTATCCCAA +
Preference number: 5 (lower is better)
Translates to: ELSCNNSFSSSGTKFSSIRELPV*FTFVSQ
Trigger: TTGGGATACAAAAGTGAACAAAACAGGTAATTCCCT...AATTGAGCTAAACTTGGTGCCTGAAGAAGAGAATGAATTATTGCAGCTTAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504137.1
CDS-3UTR CAA 90 bp AAGTTTAGCTCAATTATTGATTCAGGGTGTCGAAAAGCAAATGGATCTTTTACCAGTTTAGCTCAATTATaGATTCAGGGTGTCGAAAAG +
Preference number: 5 (lower is better)
Translates to: KFSSIIDSGCRKANGSFTSLAQL*IQGVEK
Trigger: CTTTTCGACACCCTGAATCAATAATTGAGCTAAACT...GGTAAAAGATCCATTTGCTTTTCGACACCCTGAATCAATAATTGAGCTAAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504137.1
ENST00000505260.5
CDS GCA 72 bp AAAACCAGACTGTATTTCCCGCAACGAACCCTGGAATaGTTCGCTTTAGCGGACTCCGGTCCACTCCCATCA +
Preference number: 6 (lower is better)
Translates to: KTRLYFPQRTLE*FALADSGPLPS
Trigger: TGATGGGAGTGGACCGGAGTCCGCTAAAGCGAAGCATTCCAGGGTTCGTTGCGGGAAATACAGTCTGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502856.5
ENST00000510032.5
ENST00000513053.5
CDS CAA 72 bp AGAATTCAGGACCTGGTAGATGCCTTTGACTTAATCTaGGTTAGATGCTTCCTCCAGCCCAGCCGCAGCGAC +
Preference number: 6 (lower is better)
Translates to: RIQDLVDAFDLI*VRCFLQPSRSD
Trigger: GTCGCTGCGGCTGGGCTGGAGGAAGCATCTAACCAAGATTAAGTCAAAGGCATCTACCAGGTCCTGAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514803.1
CDS CCA 72 bp GAATGCATCCTTGACCTCTTGCATGTCCCAGCACAGTaGGTGGTCATCAATGTATTCAGAACTACACTGCTA +
Preference number: 6 (lower is better)
Translates to: ECILDLLHVPAQ*VVINVFRTTLL
Trigger: TAGCAGTGTAGTTCTGAATACATTGATGACCACCCACTGTGCTGGGACATGCAAGAGGTCAAGGATGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506610.1
CDS GCA 72 bp CCCCTCTCGCATATTGAAATTGACCTCAGCATTCCTTaGAATGTGCACAATTCAGGCAAAGGATTCATGCAA +
Preference number: 6 (lower is better)
Translates to: PLSHIEIDLSIP*NVHNSGKGFMQ
Trigger: TTGCATGAATCCTTTGCCTGAATTGTGCACATTGCAAGGAATGCTGAGGTCAATTTCAATATGCGAGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422728.3
ENST00000503617.1
ENST00000504137.1
CDS CAA 72 bp ATCTCCTCCATCAAATACCCCTCTCGCATATTGAAATaGACCTCAGCATTCCTTGCAATGTGCACAATTCAG +
Preference number: 6 (lower is better)
Translates to: ISSIKYPSRILK*TSAFLAMCTIQ
Trigger: CTGAATTGTGCACATTGCAAGGAATGCTGAGGTCAATTTCAATATGCGAGAGGGGTATTTGATGGAGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422728.3
ENST00000503617.1
ENST00000504137.1
CDS CAA 72 bp CATCATATCTCCTCCATCAAATACCCCTCTCGCATATaGAAATTGACCTCAGCATTCCTTGCAATGTGCACA +
Preference number: 6 (lower is better)
Translates to: HHISSIKYPSRI*KLTSAFLAMCT
Trigger: TGTGCACATTGCAAGGAATGCTGAGGTCAATTTCAATATGCGAGAGGGGTATTTGATGGAGGAGATATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422728.3
ENST00000503617.1
ENST00000504137.1
CDS GCA 72 bp CGCATATTGAAATTGACCTCAGCATTCCTTGCAATGTaGACAATTCAGGCAAAGGATTCATGCAAAACACTT +
Preference number: 6 (lower is better)
Translates to: RILKLTSAFLAM*TIQAKDSCKTL
Trigger: AAGTGTTTTGCATGAATCCTTTGCCTGAATTGTGCACATTGCAAGGAATGCTGAGGTCAATTTCAATATGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422728.3
ENST00000503617.1
ENST00000504137.1
CDS CCA 72 bp GTTGTGCAGCTTCCAATATCAGTGCTTTCATCAAGCTaGATTGCAAAATCTATACCAGACTGTAAACGAGTA +
Preference number: 6 (lower is better)
Translates to: VVQLPISVLSSS*IAKSIPDCKRV
Trigger: TACTCGTTTACAGTCTGGTATAGATTTTGCAATCCAGCTTGATGAAAGCACTGATATTGGAAGCTGCACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS TCA 72 bp TCTCTGGATGCTAAACCTTCACGATGTATAAAACAATaGTTCCACACAGCACCATTATTAGTAACTTCTAGT +
Preference number: 6 (lower is better)
Translates to: SLDAKPSRCIKQ*FHTAPLLVTSS
Trigger: ACTAGAAGTTACTAATAATGGTGCTGTGTGGAATCATTGTTTTATACATCGTGAAGGTTTAGCATCCAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422728.3
CDS CAA 72 bp TGTCACTATTCACAATTCCAGATTCAACAGATGAACTaGAACATGCTTCTGTATATTTCACTTCACTATTCC +
Preference number: 6 (lower is better)
Translates to: CHYSQFQIQQMN*NMLLYISLHYS
Trigger: GGAATAGTGAAGTGAAATATACAGAAGCATGTTCAAGTTCATCTGTTGAATCTGGAATTGTGAATAGTGACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000422728.3
ENST00000502856.5
ENST00000503600.5
ENST00000504137.1
ENST00000504823.5
ENST00000505260.5
ENST00000506610.1
ENST00000507305.5
ENST00000508567.5
ENST00000510186.5
ENST00000510920.5
ENST00000512855.5
ENST00000513053.5
ENST00000515430.5
ENST00000515697.5