RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM200A (Homo sapiens)

Ensembl gene IDs: ENSG00000221909

Ensembl transcript IDs: ENST00000408938.2, ENST00000449309.2

Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 72 bp GCCTCAGGCACCCAAGTAACTGGGACTGCAGGCATGTaGCACCACGCCTGGCTAAGGTTTCTATTTTTAGTA +
Preference number: 3 (lower is better)
Translates to: ASGTQVTGTAGM*HHAWLRFLFLV
Trigger: TACTAAAAATAGAAACCTTAGCCAGGCGTGGTGGCACATGCCTGCAGTCCCAGTTACTTGGGTGCCTGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
3UTR GCA 72 bp CTGCAATCTCTGCCTTCCTGGTTTAAGAGATTCTCCTaGCTCAGGCACCCAAGTAACTGGGACTGCAGGCAT +
Preference number: 3 (lower is better)
Translates to: LQSLPSWFKRFS*LRHPSNWDCRH
Trigger: ATGCCTGCAGTCCCAGTTACTTGGGTGCCTGAGGCAGGAGAATCTCTTAAACCAGGAAGGCAGAGATTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCTGGGGGACAGCGCTTaGCACCGCCGAGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDLGDSA*HRRGWR
Trigger: GCGCCAGCCTCGGCGGTGGCAAGCGCTGTCCCCCAG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTGCCACCGCCGAGGCTaGCGCGAGGAACGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDCHRRG*REERGH
Trigger: GTGCCCCCGTTCCTCGCGCCAGCCTCGGCGGTGGCA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCGTCCCGGGCGGTCGTaGCGAGGGGATTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDRPGRS*RGDCRT
Trigger: TGTCCTGCAATCCCCTCGCCACGACCGCCCGGGACG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATATCCAGGGACACCTCTaGTGGGGGACAGCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDIQGHL*WGTALA
Trigger: GGCAAGCGCTGTCCCCCAGCAGAGGTGTCCCTGGAT...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATGGGACTGCAGGCATGTaGCACCACGCCTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDGTAGM*HHAWLR
Trigger: CCTTAGCCAGGCGTGGTGGCACATGCCTGCAGTCCC...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTCGTGGCGAGGGGATTaGAGGACACAGCCATGCACG +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDSWRGD*RTQPCT
Trigger: CGTGCATGGCTGTGTCCTGCAATCCCCTCGCCACGA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCCGCCCGGAGAAGTCTaGGATGCTGGGATAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDPPGEV*DAGIEG
Trigger: CCCTTCTATCCCAGCATCCCAGACTTCTCCGGGCGG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTGCAGGACACAGCCATaGACGTCCAACTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDCRTQP*TSNSVP
Trigger: GGGGACAGAGTTGGACGTGCATGGCTGTGTCCTGCA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR TCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATGGTCTTGAACTCAAGTaGTCTGCCCACCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDGLELK*SAHLGL
Trigger: GAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACC...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR TCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTGGCCAGGCTGGTCTTaGACTCAAGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDWPGWS*TQVICP
Trigger: TGGGCAGATCACTTGAGTTCAAGACCAGCCTGGCCA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATACCTCGGTCTCCCACTaGTGGGATTACAGGCGTAAG +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDTSVSH*WDYRRK
Trigger: CTTACGCCTGTAATCCCAGCAGTGGGAGACCGAGGT...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATAGGCACCCAAGTAACTaGGACTGCAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDRHPSN*DCRHVP
Trigger: TGGCACATGCCTGCAGTCCCAGTTACTTGGGTGCCT...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCGGAGAAGTCTGGGATaGTGGGATAGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDRRSLG*WDRRGC
Trigger: ACAACCCCTTCTATCCCAGCATCCCAGACTTCTCCG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCCTTCACTATCACGATaGCTTCCATCTCCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDPSLSR*LPSPGY
Trigger: GTACCCAGGAGATGGAAGGCATCGTGATAGTGAAGG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCTCCTGGGTACCCCCTaGAGACAAATCTGTAGTATC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDLLGTP*RQICSI
Trigger: GATACTACAGATTTGTCTCCAGGGGGTACCCAGGAG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATAGAAGTCTGGGATGCTaGGATAGAAGGGGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDRSLGC*DRRGCD
Trigger: GTCACAACCCCTTCTATCCCAGCATCCCAGACTTCT...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR TCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCAGGGCTGTCCTTTGTaGCCTAGGTTTTATGAGATC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDQGCPL*PRFYEI
Trigger: GATCTCATAAAACCTAGGTCACAAAGGACAGCCCTG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR TCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCTTGCCACACATATCTaGCATAAACCAAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDLATHI*HKPRVW
Trigger: CCACACTCTTGGTTTATGTCAGATATGTGTGGCAAG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATGAGTGTGGGACAACTTaGAATATCAGTGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDECGTT*NISALI
Trigger: GATGAGAGCACTGATATTGCAAGTTGTCCCACACTC...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTTTAAGAGATTCTCCTaGCTCAGGCACCCAAGTAAC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDFKRFS*LRHPSN
Trigger: GTTACTTGGGTGCCTGAGGCAGGAGAATCTCTTAAA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATGCTCACTGCAATCTCTaGCTTCCTGGTTTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDAHCNL*LPGLRD
Trigger: ATCTCTTAAACCAGGAAGGCAGAGATTGCAGTGAGC...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATATTATCTCAGCTCACTaGAATCTCTGCCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDIISAH*NLCLPG
Trigger: ACCAGGAAGGCAGAGATTGCAGTGAGCTGAGATAAT...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCAATCTCTGCCTTCCTaGTTTAAGAGATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDQSLPS*FKRFSC
Trigger: GCAGGAGAATCTCTTAAACCAGGAAGGCAGAGATTG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTATGAGATCAGGTTTTaGTATCCTGTATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDYEIRF*YPVSRD
Trigger: GTCCCTGGATACAGGATAGCAAAACCTGATCTCATA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR TCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCTCAATACTTTTCCTTaGGAAAGCCAACGAACTTCT +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDLNTFP*ESQRTS
Trigger: AGAAGTTCGTTGGCTTTCTCAAGGAAAAGTATTGAG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR TCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTGTAAATCTCGTTCCTaGGTTCATATACTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDCKSRS*VHILCS
Trigger: TGAGCAGAGTATATGAACTCAGGAACGAGATTTACA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR TCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTATCTGGTGCACTATTaGGCCTATTTCTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDYLVHY*AYFSSL
Trigger: CAAAGAAGAGAAATAGGCTCAATAGTGCACCAGATA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTGCTTCCAAATGTTTTaGAATCGTACAGATTCGACG +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDCFQMF*NRTDST
Trigger: CGTCGAATCTGTACGATTGCAAAACATTTGGAAGCA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR TCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATGTTCACTCCAATCTCTaGACAAAATATTTCGAGAAG +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDVHSNL*TKYFEK
Trigger: CTTCTCGAAATATTTTGTTCAGAGATTGGAGTGAAC...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR TCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATAGTTTGTATTTAATGTaGTGGGTGTGCTTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDSLYLM*WVCLSV
Trigger: AACAGACAAGCACACCCATCACATTAAATACAAACT...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR GCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCCGTGTAATAAGCATTaGTTCCAAATGTTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDPCNKH*FQMFCN
Trigger: ATTGCAAAACATTTGGAAGCAATGCTTATTACACGG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CCA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCAAACAGCATTGTTGTaGGTTGCTTCTAACAATTTT +
Preference number: 4 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDQTALL*VASNNF
Trigger: AAAATTGTTAGAAGCAACCCACAACAATGCTGTTTG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS CCA 90 bp CCAGGGACACCTCTGCTGGGGGACAGCGCTTGCCACCGCCGAGGCTaGCGCGAGGAACGGGGGCACGGACCCGCTTCCACTCCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: PGTPLLGDSACHRRG*REERGHGPASTPSR
Trigger: CCGGGACGGAGTGGAAGCGGGTCCGTGCCCCCGTTCCTCGCGCCAGCCTCGGCGGTGGCAAGCGCTGTCCCCCAGCAGAGGTGTCCCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS CCA 90 bp CCACTGGGTCGGGCCGCCTCCTTGCAGGGAGTCTCAAGGATGGGCTaGCGTCAGGGAGGGGCCCAGGGGGCGCTTTCCCAACACTGGTCG +
Preference number: 5 (lower is better)
Translates to: PLGRAASLQGVSRMG*RQGGAQGALSQHWS
Trigger: CGACCAGTGTTGGGAAAGCGCCCCCTGGGCCCCTCCCTGACGCCAGCCCATCCTTGAGACTCCCTGCAAGGAGGCGGCCCGACCCAGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408938.2
CDS GCA 90 bp ACGGACCCGCTTCCACTCCGTCCCGGGCGGTCGTGGCGAGGGGATTaGAGGACACAGCCATGCACGTCCAACTCTGTCCCCGCCCGGAGA +
Preference number: 5 (lower is better)
Translates to: TDPLPLRPGRSWRGD*RTQPCTSNSVPARR
Trigger: TCTCCGGGCGGGGACAGAGTTGGACGTGCATGGCTGTGTCCTGCAATCCCCTCGCCACGACCGCCCGGGACGGAGTGGAAGCGGGTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS GCA 90 bp CTCCGTCCCGGGCGGTCGTGGCGAGGGGATTGCAGGACACAGCCATaGACGTCCAACTCTGTCCCCGCCCGGAGAAGTCTGGGATGCTGG +
Preference number: 5 (lower is better)
Translates to: LRPGRSWRGDCRTQP*TSNSVPARRSLGCW
Trigger: CCAGCATCCCAGACTTCTCCGGGCGGGGACAGAGTTGGACGTGCATGGCTGTGTCCTGCAATCCCCTCGCCACGACCGCCCGGGACGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS GCA 90 bp TTTGCTATCCTGTATCCAGGGACACCTCTGCTGGGGGACAGCGCTTaGCACCGCCGAGGCTGGCGCGAGGAACGGGGGCACGGACCCGCT +
Preference number: 5 (lower is better)
Translates to: FAILYPGTPLLGDSA*HRRGWREERGHGPA
Trigger: AGCGGGTCCGTGCCCCCGTTCCTCGCGCCAGCCTCGGCGGTGGCAAGCGCTGTCCCCCAGCAGAGGTGTCCCTGGATACAGGATAGCAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS CCA 90 bp AGGAACGGGGGCACGGACCCGCTTCCACTCCGTCCCGGGCGGTCGTaGCGAGGGGATTGCAGGACACAGCCATGCACGTCCAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: RNGGTDPLPLRPGRS*RGDCRTQPCTSNSV
Trigger: GACAGAGTTGGACGTGCATGGCTGTGTCCTGCAATCCCCTCGCCACGACCGCCCGGGACGGAGTGGAAGCGGGTCCGTGCCCCCGTTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATGCTGGGGGACAGCGCTaGCCACCGCCGAGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDAGGQR*PPPRLA
Trigger: CGCCAGCCTCGGCGGTGGCAAGCGCTGTCCCCCAGC...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATGTCGTGGCGAGGGGATaGCAGGACACAGCCATGCAC +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDVVARG*QDTAMH
Trigger: GTGCATGGCTGTGTCCTGCAATCCCCTCGCCACGAC...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATGAAGGGGTTGTGACTTaGGGGACCAGGAGCACTAGA +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDEGVVT*GTRSTR
Trigger: TCTAGTGCTCCTGGTCCCCAAAGTCACAACCCCTTC...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTTGGCCAGGCTGGTCTaGAACTCAAGTGATCTGCCC +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDLARLV*NSSDLP
Trigger: GGGCAGATCACTTGAGTTCAAGACCAGCCTGGCCAA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCAGGAACTGGCTCACTaGATCCAAATAGGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDQELAH*IQIGSV
Trigger: AACAGACCCTATTTGGATCAAGTGAGCCAGTTCCTG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATAGAGTGTGGGACAACTaGCAATATCAGTGCTCTCAT +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDRVWDN*QYQCSH
Trigger: ATGAGAGCACTGATATTGCAAGTTGTCCCACACTCT...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTTGCTTCCAAATGTTTaGCAATCGTACAGATTCGAC +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDLLPNV*QSYRFD
Trigger: GTCGAATCTGTACGATTGCAAAACATTTGGAAGCAA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATGTTTTCCGGTCATATTaGCTGTTCCATCACTTGAAA +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDVFRSY*LFHHLK
Trigger: TTTCAAGTGATGGAACAGCAAATATGACCGGAAAAC...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATCTTGGTGAAATTTCTTaGGATACCAAAGCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDLGEIS*DTKASR
Trigger: TCGAGAAGCTTTGGTATCCAAAGAAATTTCACCAAG...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATATTTGTCATCAAAAATaGTCCGTACCATGTCCATAC +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDICHQK*SVPCPY
Trigger: GTATGGACATGGTACGGACAATTTTTGATGACAAAT...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATTTAACCGTGTCAAGATaGAAAATCCTAGTTCACACA +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDLTVSR*KILVHT
Trigger: TGTGTGAACTAGGATTTTCAATCTTGACACGGTTAA...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATGCCTATTTCTCTTCTTaGTTTTTAACCGTGTCAAGA +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDAYFSS*FLTVSR
Trigger: TCTTGACACGGTTAAAAACAAAGAAGAGAAATAGGC...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS-3UTR CAA 90 bp AGGCTGGTCTTGAACTCAAGTGATCTGCCCACCTCGGTCTCCCACTGCTGGGATATATCTGGTGCACTATaGAGCCTATTTCTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RLVLNSSDLPTSVSHCWDISGAL*SLFLFF
Trigger: AAAGAAGAGAAATAGGCTCAATAGTGCACCAGATAT...ATCCCAGCAGTGGGAGACCGAGGTGGGCAGATCACTTGAGTTCAAGACCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS GCA 90 bp TATACCGGACTGCAGCCGTGTAATAAGCATTGCTTCCAAATGTTTTaGAATCGTACAGATTCGACGAGATATTGTATTATCACTAAGAGG +
Preference number: 5 (lower is better)
Translates to: YTGLQPCNKHCFQMF*NRTDSTRYCIITKR
Trigger: CCTCTTAGTGATAATACAATATCTCGTCGAATCTGTACGATTGCAAAACATTTGGAAGCAATGCTTATTACACGGCTGCAGTCCGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408938.2
ENST00000449309.2
CDS TCA 90 bp AACAACATAAGAGATCCTCTACAAAATCATCTTGCCACACATATCTaGCATAAACCAAGAGTGTGGGACAACTTGCAATATCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: NNIRDPLQNHLATHI*HKPRVWDNLQYQCS
Trigger: AGAGCACTGATATTGCAAGTTGTCCCACACTCTTGGTTTATGTCAGATATGTGTGGCAAGATGATTTTGTAGAGGATCTCTTATGTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408938.2
ENST00000449309.2
CDS TCA 90 bp CAGGAACACATGAAGATAATGCTACCCGCATATCTGGTGCACTATTaGGCCTATTTCTCTTCTTTGTTTTTAACCGTGTCAAGATTGAAA +
Preference number: 5 (lower is better)
Translates to: QEHMKIMLPAYLVHY*AYFSSLFLTVSRLK
Trigger: TTTCAATCTTGACACGGTTAAAAACAAAGAAGAGAAATAGGCTCAATAGTGCACCAGATATGCGGGTAGCATTATCTTCATGTGTTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS CCA 72 bp CCTCTGCTGGGGGACAGCGCTTGCCACCGCCGAGGCTaGCGCGAGGAACGGGGGCACGGACCCGCTTCCACT +
Preference number: 6 (lower is better)
Translates to: PLLGDSACHRRG*REERGHGPAST
Trigger: AGTGGAAGCGGGTCCGTGCCCCCGTTCCTCGCGCCAGCCTCGGCGGTGGCAAGCGCTGTCCCCCAGCAGAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS GCA 72 bp CTGTATCCAGGGACACCTCTGCTGGGGGACAGCGCTTaGCACCGCCGAGGCTGGCGCGAGGAACGGGGGCAC +
Preference number: 6 (lower is better)
Translates to: LYPGTPLLGDSA*HRRGWREERGH
Trigger: GTGCCCCCGTTCCTCGCGCCAGCCTCGGCGGTGGCAAGCGCTGTCCCCCAGCAGAGGTGTCCCTGGATACAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS CCA 72 bp GGCACGGACCCGCTTCCACTCCGTCCCGGGCGGTCGTaGCGAGGGGATTGCAGGACACAGCCATGCACGTCC +
Preference number: 6 (lower is better)
Translates to: GTDPLPLRPGRS*RGDCRTQPCTS
Trigger: GGACGTGCATGGCTGTGTCCTGCAATCCCCTCGCCACGACCGCCCGGGACGGAGTGGAAGCGGGTCCGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS CAA 72 bp CCTGTATCCAGGGACACCTCTGCTGGGGGACAGCGCTaGCCACCGCCGAGGCTGGCGCGAGGAACGGGGGCA +
Preference number: 6 (lower is better)
Translates to: PVSRDTSAGGQR*PPPRLARGTGA
Trigger: TGCCCCCGTTCCTCGCGCCAGCCTCGGCGGTGGCAAGCGCTGTCCCCCAGCAGAGGTGTCCCTGGATACAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS CAA 90 bp CACGGACCCGCTTCCACTCCGTCCCGGGCGGTCGTGGCGAGGGGATaGCAGGACACAGCCATGCACGTCCAACTCTGTCCCCGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: HGPASTPSRAVVARG*QDTAMHVQLCPRPE
Trigger: CTCCGGGCGGGGACAGAGTTGGACGTGCATGGCTGTGTCCTGCAATCCCCTCGCCACGACCGCCCGGGACGGAGTGGAAGCGGGTCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS GCA 72 bp GGGCGGTCGTGGCGAGGGGATTGCAGGACACAGCCATaGACGTCCAACTCTGTCCCCGCCCGGAGAAGTCTG +
Preference number: 6 (lower is better)
Translates to: GRSWRGDCRTQP*TSNSVPARRSL
Trigger: CAGACTTCTCCGGGCGGGGACAGAGTTGGACGTGCATGGCTGTGTCCTGCAATCCCCTCGCCACGACCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS GCA 72 bp CTTCCACTCCGTCCCGGGCGGTCGTGGCGAGGGGATTaGAGGACACAGCCATGCACGTCCAACTCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: LPLRPGRSWRGD*RTQPCTSNSVP
Trigger: GGGGACAGAGTTGGACGTGCATGGCTGTGTCCTGCAATCCCCTCGCCACGACCGCCCGGGACGGAGTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS GCA 72 bp CAGGTTTTGCTATCCCACTGGGTCGGGCCGCCTCCTTaGAGGGAGTCTCAAGGATGGGCTGGCGTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: QVLLSHWVGPPP*RESQGWAGVRE
Trigger: CTCCCTGACGCCAGCCCATCCTTGAGACTCCCTGCAAGGAGGCGGCCCGACCCAGTGGGATAGCAAAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408938.2
CDS CAA 72 bp TCAGGTTTTGCTATCCCACTGGGTCGGGCCGCCTCCTaGCAGGGAGTCTCAAGGATGGGCTGGCGTCAGGGA +
Preference number: 6 (lower is better)
Translates to: SGFAIPLGRAAS*QGVSRMGWRQG
Trigger: TCCCTGACGCCAGCCCATCCTTGAGACTCCCTGCAAGGAGGCGGCCCGACCCAGTGGGATAGCAAAACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408938.2
CDS CCA 72 bp GACGTGGAAAAGCTGCGAAAACGAGCCTTCGAATCATaGACGCGCGGGCCCAGCTCCTCCTCCGAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: DVEKLRKRAFES*TRGPSSSSEFL
Trigger: GAGGAACTCGGAGGAGGAGCTGGGCCCGCGCGTCCATGATTCGAAGGCTCGTTTTCGCAGCTTTTCCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408938.2
CDS CCA 72 bp CATGCACGTCCAACTCTGTCCCCGCCCGGAGAAGTCTaGGATGCTGGGATAGAAGGGGTTGTGACTTTGGGG +
Preference number: 6 (lower is better)
Translates to: HARPTLSPPGEV*DAGIEGVVTLG
Trigger: CCCCAAAGTCACAACCCCTTCTATCCCAGCATCCCAGACTTCTCCGGGCGGGGACAGAGTTGGACGTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS CAA 72 bp GAAGTCTGGGATGCTGGGATAGAAGGGGTTGTGACTTaGGGGACCAGGAGCACTAGACTCACATCCAAGCCC +
Preference number: 6 (lower is better)
Translates to: EVWDAGIEGVVT*GTRSTRLTSKP
Trigger: GGGCTTGGATGTGAGTCTAGTGCTCCTGGTCCCCAAAGTCACAACCCCTTCTATCCCAGCATCCCAGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS GCA 72 bp AAAGTCTATACCGGACTGCAGCCGTGTAATAAGCATTaGTTCCAAATGTTTTGCAATCGTACAGATTCGACG +
Preference number: 6 (lower is better)
Translates to: KVYTGLQPCNKH*FQMFCNRTDST
Trigger: CGTCGAATCTGTACGATTGCAAAACATTTGGAAGCAATGCTTATTACACGGCTGCAGTCCGGTATAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408938.2
ENST00000449309.2
CDS GCA 72 bp CACATATCTGACATAAACCAAGAGTGTGGGACAACTTaGAATATCAGTGCTCTCATCGAGTTGGATTGCAAA +
Preference number: 6 (lower is better)
Translates to: HISDINQECGTT*NISALIELDCK
Trigger: TTTGCAATCCAACTCGATGAGAGCACTGATATTGCAAGTTGTCCCACACTCTTGGTTTATGTCAGATATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408938.2
ENST00000449309.2
CDS CAA 72 bp CATGAAGATAATGCTACCCGCATATCTGGTGCACTATaGAGCCTATTTCTCTTCTTTGTTTTTAACCGTGTC +
Preference number: 6 (lower is better)
Translates to: HEDNATRISGAL*SLFLFFVFNRV
Trigger: GACACGGTTAAAAACAAAGAAGAGAAATAGGCTCAATAGTGCACCAGATATGCGGGTAGCATTATCTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS CAA 90 bp TCAGGAACACATGAAGATAATGCTACCCGCATATCTGGTGCACTATaGAGCCTATTTCTCTTCTTTGTTTTTAACCGTGTCAAGATTGAA +
Preference number: 6 (lower is better)
Translates to: SGTHEDNATRISGAL*SLFLFFVFNRVKIE
Trigger: TTCAATCTTGACACGGTTAAAAACAAAGAAGAGAAATAGGCTCAATAGTGCACCAGATATGCGGGTAGCATTATCTTCATGTGTTCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449309.2
CDS TCA 72 bp AGAGATCCTCTACAAAATCATCTTGCCACACATATCTaGCATAAACCAAGAGTGTGGGACAACTTGCAATAT +
Preference number: 6 (lower is better)
Translates to: RDPLQNHLATHI*HKPRVWDNLQY
Trigger: ATATTGCAAGTTGTCCCACACTCTTGGTTTATGTCAGATATGTGTGGCAAGATGATTTTGTAGAGGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408938.2
ENST00000449309.2
CDS GCA 72 bp CTGCAGCCGTGTAATAAGCATTGCTTCCAAATGTTTTaGAATCGTACAGATTCGACGAGATATTGTATTATC +
Preference number: 6 (lower is better)
Translates to: LQPCNKHCFQMF*NRTDSTRYCII
Trigger: GATAATACAATATCTCGTCGAATCTGTACGATTGCAAAACATTTGGAAGCAATGCTTATTACACGGCTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408938.2
ENST00000449309.2
CDS CAA 72 bp CAGTTTTCACTGCATTTTTCAATACATCCATCAGACTaGGTGAAATTTCTTTGGATACCAAAGCTTCTCGAT +
Preference number: 6 (lower is better)
Translates to: QFSLHFSIHPSD*VKFLWIPKLLD
Trigger: ATCGAGAAGCTTTGGTATCCAAAGAAATTTCACCAAGTCTGATGGATGTATTGAAAAATGCAGTGAAAACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408938.2
ENST00000449309.2
CDS CAA 72 bp TCACTAAGAGGTATAGTTCTTAGTTTATCAGCTGATTaGTCATCAAAAATTGTCCGTACCATGTCCATACAT +
Preference number: 6 (lower is better)
Translates to: SLRGIVLSLSAD*SSKIVRTMSIH
Trigger: ATGTATGGACATGGTACGGACAATTTTTGATGACAAATCAGCTGATAAACTAAGAACTATACCTCTTAGTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408938.2
ENST00000449309.2