Pregenerated sensors for FAM193B-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272459Ensembl transcript IDs: ENST00000606358.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AACAAGGAGTCGGGTTTGAGTCCCACTGTCCCAAGCACAGAACGCTaGACTCCCAGTAGACCATATGTTGCAAATAAAGACCTTCGTCCC | + |
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Preference number: 5 (lower is better) Translates to: NKESGLSPTVPSTER*TPSRPYVANKDLRP Trigger: GGGACGAAGGTCTTTATTTGCAACATATGGTCTACTGGGAGTCCAGCGTTCTGTGCTTGGGACAGTGGGACTCAAACCCGACTCCTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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| CDS TCA 90 bp | CAGGCCTTTATGTTGCCTCAATATTTCTCACCTGCAAAATGGGAATaGTCCGTACCTGCCTCGCTGTGCTGTCGGAAGGAGTCAGACGAT | + |
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Preference number: 5 (lower is better) Translates to: QAFMLPQYFSPAKWE*SVPASLCCRKESDD Trigger: ATCGTCTGACTCCTTCCGACAGCACAGCGAGGCAGGTACGGATCATTCCCATTTTGCAGGTGAGAAATATTGAGGCAACATAAAGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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| CDS GCA 90 bp | CAGCAACCTTTTCCAGGCCTTTATGTTGCCTCAATATTTCTCACCTaGAAAATGGGAATGATCCGTACCTGCCTCGCTGTGCTGTCGGAA | + |
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Preference number: 5 (lower is better) Translates to: QQPFPGLYVASIFLT*KMGMIRTCLAVLSE Trigger: TTCCGACAGCACAGCGAGGCAGGTACGGATCATTCCCATTTTGCAGGTGAGAAATATTGAGGCAACATAAAGGCCTGGAAAAGGTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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| CDS TCA 90 bp | CCCTTTCAACTCAGGCCGTCCACGAGCCCAGGAGTTCCAACAAAATaGTGTACAGCAACCTTTTCCAGGCCTTTATGTTGCCTCAATATT | + |
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Preference number: 5 (lower is better) Translates to: PFQLRPSTSPGVPTK*CTATFSRPLCCLNI Trigger: AATATTGAGGCAACATAAAGGCCTGGAAAAGGTTGCTGTACATCATTTTGTTGGAACTCCTGGGCTCGTGGACGGCCTGAGTTGAAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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| CDS CAA 90 bp | CCACTGTCCCAAGCACAGAACGCTGGACTCCCAGTAGACCATATGTaGCAAATAAAGACCTTCGTCCCTTTCAACTCAGGCCGTCCACGA | + |
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Preference number: 6 (lower is better) Translates to: PLSQAQNAGLPVDHM*QIKTFVPFNSGRPR Trigger: TCGTGGACGGCCTGAGTTGAAAGGGACGAAGGTCTTTATTTGCAACATATGGTCTACTGGGAGTCCAGCGTTCTGTGCTTGGGACAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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| CDS TCA 72 bp | CTCAGGCCGTCCACGAGCCCAGGAGTTCCAACAAAATaGTGTACAGCAACCTTTTCCAGGCCTTTATGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LRPSTSPGVPTK*CTATFSRPLCC Trigger: GCAACATAAAGGCCTGGAAAAGGTTGCTGTACATCATTTTGTTGGAACTCCTGGGCTCGTGGACGGCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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| CDS GCA 72 bp | ATATTTCTCACCTGCAAAATGGGAATGATCCGTACCTaGCTCGCTGTGCTGTCGGAAGGAGTCAGACGATGG | + |
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Preference number: 6 (lower is better) Translates to: IFLTCKMGMIRT*LAVLSEGVRRW Trigger: CCATCGTCTGACTCCTTCCGACAGCACAGCGAGGCAGGTACGGATCATTCCCATTTTGCAGGTGAGAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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| CDS TCA 72 bp | ATGTTGCCTCAATATTTCTCACCTGCAAAATGGGAATaGTCCGTACCTGCCTCGCTGTGCTGTCGGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: MLPQYFSPAKWE*SVPASLCCRKE Trigger: CTCCTTCCGACAGCACAGCGAGGCAGGTACGGATCATTCCCATTTTGCAGGTGAGAAATATTGAGGCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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| CDS CCA 72 bp | TCGGGTTTGAGTCCCACTGTCCCAAGCACAGAACGCTaGACTCCCAGTAGACCATATGTTGCAAATAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: SGLSPTVPSTER*TPSRPYVANKD Trigger: GTCTTTATTTGCAACATATGGTCTACTGGGAGTCCAGCGTTCTGTGCTTGGGACAGTGGGACTCAAACCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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| CDS CAA 72 bp | CAAGCACAGAACGCTGGACTCCCAGTAGACCATATGTaGCAAATAAAGACCTTCGTCCCTTTCAACTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: QAQNAGLPVDHM*QIKTFVPFNSG Trigger: GCCTGAGTTGAAAGGGACGAAGGTCTTTATTTGCAACATATGGTCTACTGGGAGTCCAGCGTTCTGTGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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| CDS TCA 72 bp | CTCGCTGTGCTGTCGGAAGGAGTCAGACGATGGGTGTaGAAGTATTGTAACACTATAGAAATTAATTCACTC | + |
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Preference number: 6 (lower is better) Translates to: LAVLSEGVRRWV*KYCNTIEINSL Trigger: GAGTGAATTAATTTCTATAGTGTTACAATACTTTCACACCCATCGTCTGACTCCTTCCGACAGCACAGCGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606358.1 |
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