RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM193B (Homo sapiens)

Ensembl gene IDs: ENSG00000146067

Ensembl transcript IDs: ENST00000504130.5, ENST00000505569.5, ENST00000506432.1, ENST00000506879.5, ENST00000506955.5, ENST00000507212.1, ENST00000507587.1, ENST00000508298.5, ENST00000510163.5, ENST00000510429.1, ENST00000510479.5, ENST00000513282.5, ENST00000513502.1, ENST00000514747.6, ENST00000524677.5

Found 1090 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTTCTCCTGCTTGTTGCGGCTCCGGCGGCTGCGGCCCTTGCCCTaGGGCAAGCTCTGTGGCCTTGCTGGGCCTGAGGGCTGCACAGAC +
Preference number: 1 (lower is better)
Translates to: GFSCLLRLRRLRPLP*GKLCGLAGPEGCTD
Trigger: GTCTGTGCAGCCCTCAGGCCCAGCAAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR TCA 90 bp CTCTGTGGCCTTGCTGGGCCTGAGGGCTGCACAGACTCCTGCTCCTaGGGCCGTGCCTTGGCCTCGCCTGGCCAGTTTCGCCAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: LCGLAGPEGCTDSCS*GRALASPGQFRQEL
Trigger: CAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCTCAGGCCCAGCAAGGCCACAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 90 bp CGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTaGGACTGCCAGCCCAACCTGGTCCTGGCCGGCTCCCCCGGCTCC +
Preference number: 1 (lower is better)
Translates to: RLASFARSCPSPSQF*DCQPNLVLAGSPGS
Trigger: GGAGCCGGGGGAGCCGGCCAGGACCAGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGGCCAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 90 bp TCCTTGGGCAGGAACACATCGTCCAAGGAGGAGGCTGGCTTCTCCTaGTTGTTGCGGCTCCGGCGGCTGCGGCCCTTGCCCTGGGGCAAG +
Preference number: 1 (lower is better)
Translates to: SLGRNTSSKEEAGFS*LLRLRRLRPLPWGK
Trigger: CTTGCCCCAGGGCAAGGGCCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 90 bp CTGGGCCTGAGGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTaGCCTCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCT +
Preference number: 1 (lower is better)
Translates to: LGLRAAQTPAPEAVP*PRLASFARSCPSPS
Trigger: AGAAGGAGAAGGGCAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCTCAGGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 90 bp GAGAGCCACCCAGCCCCGAGTGCCACAACCCTCCCAGAGCAACCGTaGCCCATGTCACCCCCGCCTCTCAGTGAACTTTGGCAGGGTACC +
Preference number: 1 (lower is better)
Translates to: ESHPAPSATTLPEQP*PMSPPPLSELWQGT
Trigger: GGTACCCTGCCAAAGTTCACTGAGAGGCGGGGGTGACATGGGCCACGGTTGCTCTGGGAGGGTTGTGGCACTCGGGGCTGGGTGGCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 90 bp ATCTGCCTCGCAGGGCTGGGGCAGCTGGCAAGCCAGGCCACTGTGTaGAAACTTGTGCCCCTTGCACCCGGGATCCCTGTGAGTGCTAGG +
Preference number: 1 (lower is better)
Translates to: ICLAGLGQLASQATV*KLVPLAPGIPVSAR
Trigger: CCTAGCACTCACAGGGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTGCGAGGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR GCA 90 bp GGGCTGGGCTTGCCTCGCTCTTCTTGGCCTGACTGCCCTGCCTCTTaGCCTTCTGTGGCTTCCCACCTGAGGACACAGGCTCAGGCAGCT +
Preference number: 1 (lower is better)
Translates to: GLGLPRSSWPDCPAS*PSVASHLRTQAQAA
Trigger: AGCTGCCTGAGCCTGTGTCCTCAGGTGGGAAGCCACAGAAGGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGAGCGAGGCAAGCCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 90 bp CCTGAGGCCGTGCCTTGGCCTCGCCTGGCCAGTTTCGCCAGGAGCTaGCCTTCTCCTTCTCAGTTTTGGGACTGCCAGCCCAACCTGGTC +
Preference number: 1 (lower is better)
Translates to: PEAVPWPRLASFARS*PSPSQFWDCQPNLV
Trigger: GACCAGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 90 bp CACAGCTGCCTACTTTGGGAAGCTCTAGGACCCTGCCTGGCTGCTTaGGGCCAGCGACCTGGCCCTTGGCACTGGGAACCTCTAGGCTGG +
Preference number: 1 (lower is better)
Translates to: HSCLLWEALGPCLAA*GQRPGPWHWEPLGW
Trigger: CCAGCCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 90 bp GGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTGGCCTCGCCTaGCCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGG +
Preference number: 1 (lower is better)
Translates to: GLHRLLLLRPCLGLA*PVSPGAALLLLSFG
Trigger: CCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 90 bp ACCCCACCAAAAACTCCTCCGGGCAGCCTGGCTGTCTGCTCCAACTaGTCTGCTGGGTATGGCGAGGAGGCGCCAGGAGACACAGCTGCT +
Preference number: 1 (lower is better)
Translates to: TPPKTPPGSLAVCSN*SAGYGEEAPGDTAA
Trigger: AGCAGCTGTGTCTCCTGGCGCCTCCTCGCCATACCCAGCAGAGCAGTTGGAGCAGACAGCCAGGCTGCCCGGAGGAGTTTTTGGTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 90 bp ACGCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCTaGAGGAGCCTGCCTTCCTGGGCAGGCTCAGCCAAAAGACCAACT +
Preference number: 1 (lower is better)
Translates to: TPHPHPAPHPTLQDS*RSLPSWAGSAKRPT
Trigger: AGTTGGTCTTTTGGCTGAGCCTGCCCAGGAAGGCAGGCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 90 bp GGTGGCTGCACCCCGAGAATGGTGGGGGCATCTTCAGGAGCGGCATaGTGGTGGAGGGTAGATGGGAGCTCTGACATGGCCCTGGAGTGT +
Preference number: 1 (lower is better)
Translates to: GGCTPRMVGASSGAA*WWRVDGSSDMALEC
Trigger: ACACTCCAGGGCCATGTCAGAGCTCCCATCTACCCTCCACCAGCATGCCGCTCCTGAAGATGCCCCCACCATTCTCGGGGTGCAGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 90 bp AGTGCAGAAACCCCACCAAAAACTCCTCCGGGCAGCCTGGCTGTCTaGTCCAACTGCTCTGCTGGGTATGGCGAGGAGGCGCCAGGAGAC +
Preference number: 1 (lower is better)
Translates to: SAETPPKTPPGSLAV*SNCSAGYGEEAPGD
Trigger: GTCTCCTGGCGCCTCCTCGCCATACCCAGCAGAGCAGTTGGAGCAGACAGCCAGGCTGCCCGGAGGAGTTTTTGGTGGGGTTTCTGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 90 bp TCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGGTaGGCTGCCTTGCGGAGCAGGGGAGGGAAGAAGGGCAGGTTCTGC +
Preference number: 1 (lower is better)
Translates to: SLSAGFSKPGISRSG*AALRSRGGKKGRFC
Trigger: GCAGAACCTGCCCTTCTTCCCTCCCCTGCTCCGCAAGGCAGCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR CCA 90 bp TCCACCTCAGTGCAGAAACCCCACCAAAAACTCCTCCGGGCAGCCTaGCTGTCTGCTCCAACTGCTCTGCTGGGTATGGCGAGGAGGCGC +
Preference number: 1 (lower is better)
Translates to: STSVQKPHQKLLRAA*LSAPTALLGMARRR
Trigger: GCGCCTCCTCGCCATACCCAGCAGAGCAGTTGGAGCAGACAGCCAGGCTGCCCGGAGGAGTTTTTGGTGGGGTTTCTGCACTGAGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 90 bp GGCCCCACTGGAATGTGGGGAATTCCAGAGGCCCGAGAGCTTATGTaGCGACAGGAACGAGCTAGGATCCCAGTCTCCCGAGTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: GPTGMWGIPEARELM*RQERARIPVSRVPR
Trigger: CCTGGGAACTCGGGAGACTGGGATCCTAGCTCGTTCCTGTCGGCACATAAGCTCTCGGGCCTCTGGAATTCCCCACATTCCAGTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTaGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCT +
Preference number: 1 (lower is better)
Translates to: PNTKRAVLGQQYHQP*PLGQPSPRALSVEA
Trigger: AGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR CCA 90 bp GCGCCGTCTGTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTaGGGGACTGAGAGCCTTTTTGCTTCCACTCTGCCTTCATCACTC +
Preference number: 1 (lower is better)
Translates to: APSVLTACPSAGCHT*GTESLFASTLPSSL
Trigger: GAGTGATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCACAGACGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR GCA 90 bp CTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCTGCAGGAGCCTaGCTTCCTGGGCAGGCTCAGCCAAAAGACCAACTCAAAACTCTT +
Preference number: 1 (lower is better)
Translates to: LIRRRIRPSKTPAGA*LPGQAQPKDQLKTL
Trigger: AAGAGTTTTGAGTTGGTCTTTTGGCTGAGCCTGCCCAGGAAGGCAGGCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 90 bp AGGAGGACTCCCAAGAGAGCTGCCTGGCATGGCCCCACTGGAATGTaGGGAATTCCAGAGGCCCGAGAGCTTATGTGCCGACAGGAACGA +
Preference number: 1 (lower is better)
Translates to: RRTPKRAAWHGPTGM*GIPEARELMCRQER
Trigger: TCGTTCCTGTCGGCACATAAGCTCTCGGGCCTCTGGAATTCCCCACATTCCAGTGGGGCCATGCCAGGCAGCTCTCTTGGGAGTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR TCA 90 bp TGTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACTaGGAGCCTTTTTGCTTCCACTCTGCCTTCATCACTCCCAAGCGT +
Preference number: 1 (lower is better)
Translates to: CAHGLSLGWLSHLGD*EPFCFHSAFITPKR
Trigger: ACGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR GCA 90 bp CCTGCAACACCAGTCCATTTTGAGAAGGGCCTTCTTCCCAGCCTTTaGGTTCCCGGTGACACAGCAGGCAGCAAGTCTGCACAGGCTGGC +
Preference number: 1 (lower is better)
Translates to: PATPVHFEKGLLPSL*VPGDTAGSKSAQAG
Trigger: GCCAGCCTGTGCAGACTTGCTGCCTGCTGTGTCACCGGGAACGCAAAGGCTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR CCA 90 bp TTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCA +
Preference number: 1 (lower is better)
Translates to: LVQDGGEHRGSWTGR*GTRREKLYAFSWQS
Trigger: TGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR TCA 90 bp AACCCTCCCAGAGCAACCGTGGCCCATGTCACCCCCGCCTCTCAGTaGACTTTGGCAGGGTACCTCCCGTTATCTCCTTTGCTCAAAAGA +
Preference number: 1 (lower is better)
Translates to: NPPRATVAHVTPASQ*TLAGYLPLSPLLKR
Trigger: TCTTTTGAGCAAAGGAGATAACGGGAGGTACCCTGCCAAAGTTCACTGAGAGGCGGGGGTGACATGGGCCACGGTTGCTCTGGGAGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 90 bp CTGAAGCTGGCACGGATGGAGTCTTTGACAGTGTTTTTGATCTCCTaGAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGG +
Preference number: 1 (lower is better)
Translates to: LKLARMESLTVFLIS*RRLLRKLLTRSSSR
Trigger: CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 90 bp TCGCCACTGCATGTTCTCGACCTGTCTGCCTTTCATCTTCCTCCATaGTCTTTCGGCAACTCTGGCAGACCCACAGAGGCATCTCGCCTA +
Preference number: 1 (lower is better)
Translates to: SPLHVLDLSAFHLPP*SFGNSGRPTEASRL
Trigger: TAGGCGAGATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAAGGCAGACAGGTCGAGAACATGCAGTGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 90 bp CGACCTGTCTGCCTTTCATCTTCCTCCATGCTCTTTCGGCAACTCTaGCAGACCCACAGAGGCATCTCGCCTAGGAGATTCTTGACGAGC +
Preference number: 1 (lower is better)
Translates to: RPVCLSSSSMLFRQL*QTHRGISPRRFLTS
Trigger: GCTCGTCAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAAGGCAGACAGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR CCA 90 bp CCAGAGCAACCGTGGCCCATGTCACCCCCGCCTCTCAGTGAACTTTaGCAGGGTACCTCCCGTTATCTCCTTTGCTCAAAAGAAAGTGAC +
Preference number: 1 (lower is better)
Translates to: PEQPWPMSPPPLSEL*QGTSRYLLCSKESD
Trigger: GTCACTTTCTTTTGAGCAAAGGAGATAACGGGAGGTACCCTGCCAAAGTTCACTGAGAGGCGGGGGTGACATGGGCCACGGTTGCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 90 bp CTGGCTGTCACACTTGGGGGACTGAGAGCCTTTTTGCTTCCACTCTaGCTTCATCACTCCCAAGCGTTCACTTCTCTGGGATTACACACG +
Preference number: 1 (lower is better)
Translates to: LAVTLGGLRAFLLPL*LHHSQAFTSLGLHT
Trigger: CGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR GCA 90 bp GATGTGTGTGACAAGGAGATCGCCACTGCATGTTCTCGACCTGTCTaGCTTTCATCTTCCTCCATGCTCTTTCGGCAACTCTGGCAGACC +
Preference number: 1 (lower is better)
Translates to: DVCDKEIATACSRPV*LSSSSMLFRQLWQT
Trigger: GGTCTGCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAAGGCAGACAGGTCGAGAACATGCAGTGGCGATCTCCTTGTCACACACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 90 bp CCGCCTCTCAGTGAACTTTGGCAGGGTACCTCCCGTTATCTCCTTTaGTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCT +
Preference number: 1 (lower is better)
Translates to: PPLSELWQGTSRYLL*SKESDLLPGGKLEA
Trigger: AGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGAGGTACCCTGCCAAAGTTCACTGAGAGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR TCA 90 bp ACTTTGGCAGGGTACCTCCCGTTATCTCCTTTGCTCAAAAGAAAGTaGCCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAATCCTCC +
Preference number: 1 (lower is better)
Translates to: TLAGYLPLSPLLKRK*PSSRWQAGSFGESS
Trigger: GGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGAGGTACCCTGCCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR TCA 90 bp GAGGAGGACGAGGATGAGGATGATGAGGAGGAAGACGAGGACGAATaGGAGTCATCTCCACAAGACTGTGATTTGCAGGATGTGTGTGAC +
Preference number: 1 (lower is better)
Translates to: EEDEDEDDEEEDEDE*ESSPQDCDLQDVCD
Trigger: GTCACACACATCCTGCAAATCACAGTCTTGTGGAGATGACTCTCATTCGTCCTCGTCTTCCTCCTCATCATCCTCATCCTCGTCCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 90 bp GCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTaGGGAATCCTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACC +
Preference number: 1 (lower is better)
Translates to: AQKKVTFFQVASWKL*GILLLFALSRILQT
Trigger: GGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR GCA 90 bp AGGAAGACGAGGACGAATGAGAGTCATCTCCACAAGACTGTGATTTaGAGGATGTGTGTGACAAGGAGATCGCCACTGCATGTTCTCGAC +
Preference number: 1 (lower is better)
Translates to: RKTRTNESHLHKTVI*RMCVTRRSPLHVLD
Trigger: GTCGAGAACATGCAGTGGCGATCTCCTTGTCACACACATCCTGCAAATCACAGTCTTGTGGAGATGACTCTCATTCGTCCTCGTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 90 bp ATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTaGAAGCTTTGGGGAATCCTCCTACTGTTCGCTCTCAGCAGGATT +
Preference number: 1 (lower is better)
Translates to: ISFAQKKVTFFQVAS*KLWGILLLFALSRI
Trigger: AATCCTGCTGAGAGCGAACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR CCA 90 bp TTTTGCTTCCACTCTGCCTTCATCACTCCCAAGCGTTCACTTCTCTaGGATTACACACGTATACATACTCATCAGAATCATAGCTTTCTC +
Preference number: 1 (lower is better)
Translates to: FCFHSAFITPKRSLL*DYTRIHTHQNHSFL
Trigger: GAGAAAGCTATGATTCTGATGAGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR GCA 90 bp GCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTaGAGAATCCAAACAGAACCTTATTTTTCTATTTTTAGTAGAGAC +
Preference number: 1 (lower is better)
Translates to: AEVGPVHSNFLTSLL*RIQTEPYFSIFSRD
Trigger: GTCTCTACTAAAAATAGAAAAATAAGGTTCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513282.5
3UTR-3UTR GCA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGAAGGTCGGGGTGGGCTaGCTTGCGGAGCAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: QPWPLGQPSPRALSVEAAKVGVG*LAEQGR
Trigger: CCTCCCCTGCTCCGCAAGGCAGCCCACCCCGACCTT...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR GCA 90 bp GGCGCCGTCTGTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACCGCTGCAGGGGTGGCTaGACCCCGAGAATGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GAVCAHGLSLGWLSHLGDRCRGG*TPRMVG
Trigger: CCCCACCATTCTCGGGGTGCAGCCACCCCTGCAGCG...GTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCACAGACGGCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTTGGCACACCACAGTGCCCGCTaGAGGGGTGGCTGCACCCCG +
Preference number: 2 (lower is better)
Translates to: GSSRTLPGCLGPATWPLAHHSAR*RGGCTP
Trigger: CGGGGTGCAGCCACCCCTGCAGCGGGCACTGTGGTG...TGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp CCGGGCCCGCTTGGCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTTGAGGCTGGCTTCTCCTaGTTGTTGCGGCTCCGGCGG +
Preference number: 2 (lower is better)
Translates to: PGPLGGPGAVGDFGLRAVEAGFS*LLRLRR
Trigger: CCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTC...AACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAAACGGCGGCTGCGGCCCTTaGCCTGGGGCAAGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: GPLQEPLPGRPWLPASRNGGCGP*PGASSV
Trigger: CACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCC...GTTTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCGCTCCTCTTTCCGCCTaGTCAGCCTCGAGCGGAGCT +
Preference number: 2 (lower is better)
Translates to: PGRATPRASPWQALAPGFAPLSA*SASSGA
Trigger: AGCTCCGCTCGAGGCTGACCAGGCGGAAAGAGGAGC...GAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp GCGGAGCTTCTCCCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGGGTGCTAGGGAGTGGCTaGGAGCTCGGGGGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: AELLPDLGIVPTRRGSGWVLGSG*ELGGGR
Trigger: CCTCCCACCCCCGAGCTCTCAGCCACTCCCTAGCAC...CCACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGGGAGAAGCTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGCGCTGCAGGGGTGGCTaGACCCCGAGAATGGTGGGG +
Preference number: 2 (lower is better)
Translates to: VQDGGEHRGSWTGRWGTRRCRGG*TPRMVG
Trigger: CCCCACCATTCTCGGGGTGCAGCCACCCCTGCAGCG...CCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp AGCATGCCCTCTGATCTGAGCCTCCTTCCTGGCGCCGTCTGTGCTCACGGCCTGCACCACAGTGCCCGCTaGAGGGGTGGCTGCACCCCG +
Preference number: 2 (lower is better)
Translates to: SMPSDLSLLPGAVCAHGLHHSAR*RGGCTP
Trigger: CGGGGTGCAGCCACCCCTGCAGCGGGCACTGTGGTG...CAGGCCGTGAGCACAGACGGCGCCAGGAAGGAGGCTCAGATCAGAGGGCATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp CTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTCCACCCAGCCCCGAGTaGCACAACCCTCCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: LLRPCLGLAWPVSPGAALPPSPE*HNPPRA
Trigger: TGCTCTGGGAGGGTTGTGGCACTCGGGGCTGGGTGG...AAGGGCAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp GGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAAACTCTGCCTCGCAGGGCTaGGGCAGCTGGCAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: GPLQEPLPGRPWLPASRNSASQG*GSWQAR
Trigger: CCTGGCTTGCCAGCTGCCCCAGCCCTGCGAGGCAGA...GTTTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CTGAGGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCCCTGGCCCTTGGCACTaGGAACCTCTAGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LRAAQTPAPEAVPWPRLAPGPWH*EPLGWL
Trigger: CAGCCAGCCTAGAGGTTCCCAGTGCCAAGGGCCAGG...GGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CTGAGGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCCAGCGACCTGGCCCTTaGCACTGGGAACCTCTAGGC +
Preference number: 2 (lower is better)
Translates to: LRAAQTPAPEAVPWPRLAQRPGP*HWEPLG
Trigger: GCCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTG...GGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTGTCCCAGTCCCAGTGTaGGTGTACGGCCGGAACGCC +
Preference number: 2 (lower is better)
Translates to: LLRPCLGLAWPVSPGAALVPVPV*VYGRNA
Trigger: GGCGTTCCGGCCGTACACCCACACTGGGACTGGGAC...AAGGGCAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CAA 90 bp TCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTaGGGACTGCCAGCCCAACCTGGTCCTGGCCGGCTCCCCCGGCTC +
Preference number: 2 (lower is better)
Translates to: SPGQFRQELPFSFSV*GLPAQPGPGRLPRL
Trigger: GAGCCGGGGGAGCCGGCCAGGACCAGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGGCCAGGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTCCCCTGCTGCCCGATaGAGTGTCTGCAGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: VPGRATPRASPWQALAPGSPAAR*SVCRAK
Trigger: TTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGA...GCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp GGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTTGGCACTGCTCTGCTGGGTATaGCGAGGAGGCGCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: GSSRTLPGCLGPATWPLALLCWV*RGGARR
Trigger: TCTCCTGGCGCCTCCTCGCCATACCCAGCAGAGCAG...TGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp TGCCGGGCCCGCTTGGCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGAAGGGCAGGTTCTGCTaGGTTTCCACCTCAGTGCAG +
Preference number: 2 (lower is better)
Translates to: CRARLAALALLGTLGSVLKGRFC*VSTSVQ
Trigger: CTGCACTGAGGTGGAAACCCAGCAGAACCTGCCCTT...CAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGGCCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp ACGCATCTTCCGCCACGCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGATCTCAAGGTCGGGGTaGGCTGCCTTGCGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: THLPPRLILIRRRIRPSKISRSG*AALRSR
Trigger: CCTGCTCCGCAAGGCAGCCCACCCCGACCTTGAGAT...CTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGCGTGGCGGAAGATGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR CCA 90 bp CCGTCTGTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACTGAGGCTCCTCTTTCCGCCTaGTCAGCCTCGAGCGGAGCT +
Preference number: 2 (lower is better)
Translates to: PSVLTACPSAGCHTWGTEAPLSA*SASSGA
Trigger: AGCTCCGCTCGAGGCTGACCAGGCGGAAAGAGGAGC...CTCAGTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCACAGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp ATCTTCCGCCACGCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCCCAGAGCCCCGAGATaGCCTGTGGCTGAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: IFRHASSSSGAASDPPRLPRAPR*PVAEGA
Trigger: TGCTCCCTCAGCCACAGGCCATCTCGGGGCTCTGGG...GAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGCGTGGCGGAAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR TCA 90 bp GGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAAACTGGGCAGGGCCTCACTaGGCTGTGCTAGGAGTGGTT +
Preference number: 2 (lower is better)
Translates to: GPLQEPLPGRPWLPASRNWAGPH*AVLGVV
Trigger: AACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCA...GTTTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GCCTCCCAGAGTCCCCTGCTGCCCGATGCAGTGTCTGCAGAGCCAAACGCATCTAGAGGCCCACTGCAGTaGCCACCACAGTGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: ASQSPLLPDAVSAEPNASRGPLQ*PPQCPL
Trigger: CAGCGGGCACTGTGGTGGGCACTGCAGTGGGCCTCT...AGATGCGTTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp CAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 2 (lower is better)
Translates to: QDGGEHRGSWTGRWGTRREHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...CCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp GGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTTGGCATTGGTTGGTCCAGGATaGTGGGGAGCACAGAGGGTC +
Preference number: 2 (lower is better)
Translates to: GSSRTLPGCLGPATWPLALVGPG*WGAQRV
Trigger: GACCCTCTGTGCTCCCCACCATCCTGGACCAACCAA...TGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp GGCGCCGTCTGTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACTTCCCATCTCTCTGGTaGGTGGAGGATGAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GAVCAHGLSLGWLSHLGDFPSLW*VEDEVQ
Trigger: CTGCACCTCATCCTCCACCCACCAGAGAGATGGGAA...GTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCACAGACGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp TCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAATCTCATTTCTGCCCATaGTGGGGCTGGCTCGCCTGG +
Preference number: 2 (lower is better)
Translates to: SGHSKSLSLAGLGSRLPESHFCP*WGWLAW
Trigger: CCAGGCGAGCCAGCCCCACCATGGGCAGAAATGAGA...TTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 90 bp CGCTTGGCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTaGATGAATTCCAGCAGCTCATCCACATCTCGGTGGTCCACGGCG +
Preference number: 2 (lower is better)
Translates to: RLAALALLGTLGSVL*MNSSSSSTSRWSTA
Trigger: CGCCGTGGACCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGATGGGCAGGGCCTCACTaGGCTGTGCTAGGAGTGGTT +
Preference number: 2 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGWAGPH*AVLGVV
Trigger: AACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCA...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
3UTR-3UTR TCA 90 bp GTCTTGACCCAGATCACCCGGGATAGGTTGGGCACGGTGTTGAGTCTCCTCACGGTGCTAGGGAGTGGCTaGGAGCTCGGGGGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: VLTQITRDRLGTVLSLLTVLGSG*ELGGGR
Trigger: CCTCCCACCCCCGAGCTCTCAGCCACTCCCTAGCAC...CGTGAGGAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp TCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAAGGGACAGGTCAAGGTTaGTGTCAGGCTGCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: SGHSKSLSLAGLGSRLPEGTGQG*CQAAAL
Trigger: CAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCC...TTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp CACCCCGTCCATGTCCTTGGGCAGGAACACATCGTCCAAGGAGGAGGCTGGCTTTGGCCTTGCTGGGCCTaGGGGCTGCACAGACTCCTG +
Preference number: 2 (lower is better)
Translates to: HPVHVLGQEHIVQGGGWLWPCWA*GLHRLL
Trigger: CAGGAGTCTGTGCAGCCCTCAGGCCCAGCAAGGCCA...AAGCCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAAGGACATGGACGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp CATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTCAAACTTGTGCCCCTTaGACCCGGGATCCCTGTGAG +
Preference number: 2 (lower is better)
Translates to: HQPWPLGQPSPRALSVEAQTCAP*TRDPCE
Trigger: CTCACAGGGATCCCGGGTGCAAGGGGCACAAGTTTG...AGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GGCACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGCTGTCTGCTCCAACTaGTCTGCTGGGTATGGCGAG +
Preference number: 2 (lower is better)
Translates to: GTVLSLLTSPFSGTIPGGAVCSN*SAGYGE
Trigger: CTCGCCATACCCAGCAGAGCAGTTGGAGCAGACAGC...CCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR GCA 90 bp GGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAAGGCAGCCTGGCTGTCTaGTCCAACTGCTCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: GGEHRGSWTGRWGTRREKGSLAV*SNCSAG
Trigger: CCCAGCAGAGCAGTTGGAGCAGACAGCCAGGCTGCC...TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp CTTTGGGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTCATCTCTCTGGTGGGTaGAGGATGAGGTGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: LWEALGPCLAAWGQRPGPHLSGG*RMRCRS
Trigger: GCTCCTGCACCTCATCCTCCACCCACCAGAGAGATG...AGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCCCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CTCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTCCTGGCCCTTGGCACTaGGAACCTCTAGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LTSVHGGWGPLISAHGGAPGPWH*EPLGWL
Trigger: CAGCCAGCCTAGAGGTTCCCAGTGCCAAGGGCCAGG...AGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CACCCCGTCCATGTCCTTGGGCAGGAACACATCGTCCAAGGAGGAGGCTGGCTTTTGGGGCCAGCGACCTaGCCCTTGGCACTGGGAACC +
Preference number: 2 (lower is better)
Translates to: HPVHVLGQEHIVQGGGWLLGPAT*PLALGT
Trigger: GGTTCCCAGTGCCAAGGGCCAGGTCGCTGGCCCCAA...AAGCCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAAGGACATGGACGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 90 bp AGCTTGTGCCGGGCCCGCTTGGCGGCCCTGGCGCTGTTGGGGACTTaGGGCTCCGTGCTGTTGATGAATTCCAGCAGCTCATCCACATCT +
Preference number: 2 (lower is better)
Translates to: SLCRARLAALALLGT*GSVLLMNSSSSSTS
Trigger: AGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGGCCCGGCACAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 90 bp TTGGGTGTCTTGACCCAGATCACCCGGGATAGGTTGGGCACGGTGTaGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGG +
Preference number: 2 (lower is better)
Translates to: LGVLTQITRDRLGTV*SLLTSPFSGTIPGG
Trigger: CCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGACACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp ATGTGCCGACAGGAACGAGCTAGGATCCCAGTCTCCCGAGTTCCCAGGGCAGGACTGGTGGGTGGAGGATaGGGTGCAGGAGCTTCGCTC +
Preference number: 2 (lower is better)
Translates to: MCRQERARIPVSRVPRAGLVGGG*GAGASL
Trigger: GAGCGAAGCTCCTGCACCTCATCCTCCACCCACCAG...TCCTGCCCTGGGAACTCGGGAGACTGGGATCCTAGCTCGTTCCTGTCGGCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR TCA 90 bp CACCCCGTCCATGTCCTTGGGCAGGAACACATCGTCCAAGGAGGAGGCTGGCTTGGTTGGGCACGGTGTTaGGTCTCCTCACGAGCCCGT +
Preference number: 2 (lower is better)
Translates to: HPVHVLGQEHIVQGGGWLGWARC*VSSRAR
Trigger: ACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACC...AAGCCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAAGGACATGGACGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCCTGGCGCCGTCTGTaGTCACGGCCTGTCCCTCGG +
Preference number: 2 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQSWRRL*SRPVPR
Trigger: CCGAGGGACAGGCCGTGAGCACAGACGGCGCCAGGA...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GGGGAAAGCCTCACCGGGGATGGTAGGAGGACTCCCAAGAGAGCTGCCTGGCATTTCTTTTTCAGCTTGTaGCGGGCCCGCTTGGCGGCC +
Preference number: 2 (lower is better)
Translates to: GESLTGDGRRTPKRAAWHFFFSL*RARLAA
Trigger: GGCCGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAA...ATGCCAGGCAGCTCTCTTGGGAGTCCTCCTACCATCCCCGGTGAGGCTTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR GCA 90 bp TCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGTTCTTTTTCAGCTTGTaGCGGGCCCGCTTGGCGGCC +
Preference number: 2 (lower is better)
Translates to: SPLSMVGGGLSFLPMVGLFFFSL*RARLAA
Trigger: GGCCGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAA...CAGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp CCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCGAAACACGATTTGCCTaGTTTAGAGCTTCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: PGRATPRASPWQALAPGFETRFA*FRASAA
Trigger: GGCAGCAGAAGCTCTAAAGCAGGCAAATCGTGTTTC...GAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGTTATACGCCTTCAGCTaGCAGTCAGGGCCTCAGGAC +
Preference number: 2 (lower is better)
Translates to: QDGGEHRGSWTGRWGTRRLYAFS*QSGPQD
Trigger: GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAA...CCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGCCAAGAGCCTCTCCCTaGCAGGCCTTGGCTCCCGGC +
Preference number: 2 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQPRASP*QALAPG
Trigger: GCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGG...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp ATGTGCCGACAGGAACGAGCTAGGATCCCAGTCTCCCGAGTTCCCAGGGCAGGACATTTCTGCCCATGGTaGGGCTGGCTCGCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: MCRQERARIPVSRVPRAGHFCPW*GWLAWS
Trigger: GCTCCAGGCGAGCCAGCCCCACCATGGGCAGAAATG...TCCTGCCCTGGGAACTCGGGAGACTGGGATCCTAGCTCGTTCCTGTCGGCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CAA 90 bp CCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTaGGCTCCCGGCTTCCAGAAACACGATTTGCCTGCTTTAGAGCTT +
Preference number: 2 (lower is better)
Translates to: PVPGRATPRASPWQA*APGFQKHDLPALEL
Trigger: AAGCTCTAAAGCAGGCAAATCGTGTTTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp CTCCGTGCTGTTGATGAATTCCAGCAGCTCATCCACATCTCGGTGGTCCACGGCAGGAAGCGGCTCTGCTaGGGTCAAGGGGCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: LRAVDEFQQLIHISVVHGRKRLC*GQGAPA
Trigger: TGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCT...GCCGTGGACCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp AGGGGGCAGCTTCTCACCCTGCAACACCAGTCCATTTTGAGAAGGGCCTTCTTCCAGTGCCCACCACAGTaGCCGCTGCAGGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: RGQLLTLQHQSILRRAFFQCPPQ*PLQGWL
Trigger: CAGCCACCCCTGCAGCGGGCACTGTGGTGGGCACTG...GAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR GCA 90 bp GGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTTGGCAGTGTTTTTGATCTCCTaGAGACGGCTGCTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: GSSRTLPGCLGPATWPLAVFLIS*RRLLRK
Trigger: CTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACAC...TGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp TCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAACAGGCAGCTCCTGCTTaGAACTGGGAACTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: SGHSKSLSLAGLGSRLPEQAAPA*NWELPL
Trigger: CAAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTG...TTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTGAGGCTGGCTTCTCCTaGTTGTTGCGGCTCCGGCGG +
Preference number: 2 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPEAGFS*LLRLRR
Trigger: CCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTC...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp ACGCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCTGCAGGAGCTTCCAGGTGGCAAGCTaGAAGCTTTGGGGAATCCTC +
Preference number: 2 (lower is better)
Translates to: TPHPHPAPHPTLQDSCRSFQVAS*KLWGIL
Trigger: GAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAA...GCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR CCA 90 bp TCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGAAGAGCCATGCCTTCTaGCTGCACCAGCCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: SPLSMVGGGLSFLPMVGLKSHAF*LHQPPR
Trigger: TCTGGGAGGCTGGTGCAGCCAGAAGGCATGGCTCTT...CAGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp CTTATGTGCCGACAGGAACGAGCTAGGATCCCAGTCTCCCGAGTTCCCAGGGCAGTGAGTGCTAGGGAGTaGCTGAGAGCTCGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: LMCRQERARIPVSRVPRAVSARE*LRARGW
Trigger: CCACCCCCGAGCTCTCAGCCACTCCCTAGCACTCAC...TGCCCTGGGAACTCGGGAGACTGGGATCCTAGCTCGTTCCTGTCGGCACATAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGCAGGGCTGGGGCAGCTaGCAAGCCAGGCCACTGTGT +
Preference number: 2 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQQGWGS*QARPLC
Trigger: ACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTG...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGGGCCTGTCCCTCGGCTaGCTGTCACACTTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQGLSLG*LSHLGD
Trigger: GTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCC...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CTCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTTTGCCTCGCTCTTCTTaGCCTGACTGCCCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: LTSVHGGWGPLISAHGGALPRSS*PDCPAS
Trigger: AGAGGCAGGGCAGTCAGGCCAAGAAGAGCGAGGCAA...AGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGGCTTATGAGACTTTGCCTTGGCCTCGCCTaGCCAGTTTCGCCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: PDLGIVPTRRGSGWLMRLCLGLA*PVSPGA
Trigger: AGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCA...AAGTCTCATAAGCCACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGCCTGAGGCCGTGCCTTaGCCTCGCCTGGCCAGTTTC +
Preference number: 2 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQPEAVP*PRLASF
Trigger: GAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGG...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGGCTTATGAGACTTCTCCAACTGCTCTGCTaGGTATGGCGAGGAGGCGCC +
Preference number: 2 (lower is better)
Translates to: PDLGIVPTRRGSGWLMRLLQLLC*VWRGGA
Trigger: GGCGCCTCCTCGCCATACCCAGCAGAGCAGTTGGAG...AAGTCTCATAAGCCACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp CTCCGTGCTGTTGATGAATTCCAGCAGCTCATCCACATCTCGGTGGTCCACGGCAAGGTGCTGCCGGGGTaGTGGGCAGCAGGTGTGGGT +
Preference number: 2 (lower is better)
Translates to: LRAVDEFQQLIHISVVHGKVLPG*WAAGVG
Trigger: ACCCACACCTGCTGCCCACCACCCCGGCAGCACCTT...GCCGTGGACCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CAA 90 bp TTCTTTTTCAGCTTGTGCCGGGCCCGCTTGGCGGCCCTGGCGCTGTaGGGGACTTTGGGCTCCGTGCTGTTGATGAATTCCAGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: FFFSLCRARLAALAL*GTLGSVLLMNSSSS
Trigger: TGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAAGGAAGCGGCTCTGCTaGGGTCAAGGGGCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLRKRLC*GQGAPA
Trigger: TGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCT...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR GCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGTTCTTTTTCAGCTTGTaGCGGGCCCGCTTGGCGGCC +
Preference number: 2 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRFFFSL*RARLAA
Trigger: GGCCGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAA...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTTGGCAGAAACACGATTTGCCTaGTTTAGAGCTTCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: GSSRTLPGCLGPATWPLAETRFA*FRASAA
Trigger: GGCAGCAGAAGCTCTAAAGCAGGCAAATCGTGTTTC...TGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp TTTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGGGGGCCTCTCATTTCTaGCCATGGTGGGGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: FDLLQTAAQEAVDPIQFPGASHF*PWWGWL
Trigger: GAGCCAGCCCCACCATGGGCAGAAATGAGAGGCCCC...CGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GCTCGCCTGGAGCTTGTAACGTGTGGTTCTGAGGGGAGCCCAAAGTCAAAGGGGGCAGAGGGAAGAGGCTaGAGTCGTCCAGTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: ARLELVTCGSEGSPKSKGAEGRG*SRPVPE
Trigger: CTCTGGGACTGGACGACTGCAGCCTCTTCCCTCTGC...CCCCTTTGACTTTGGGCTCCCCTCAGAACCACACGTTACAAGCTCCAGGCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp CTCTTTCGGCAACTCTGGCAGACCCACAGAGGCATCTCGCCTAGGAGATTCTTGTGCCCGCTGCAGGGGTaGCTGCACCCCGAGAATGGT +
Preference number: 2 (lower is better)
Translates to: LFRQLWQTHRGISPRRFLCPLQG*LHPENG
Trigger: ACCATTCTCGGGGTGCAGCCACCCCTGCAGCGGGCA...CAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGATCTGAGCCTCCTTCCTaGCGCCGTCTGTGCTCACGG +
Preference number: 2 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGSEPPS*RRLCSR
Trigger: CCGTGAGCACAGACGGCGCCAGGAAGGAGGCTCAGA...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCATCCACATCTCGGTaGTCCACGGCGGGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQSSTSR*STAGSP
Trigger: TGGGGAGCCCGCCGTGGACCACCGAGATGTGGATGA...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp CTGGGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTCTCCCAGAGCAACCGTaGCCCATGTCACCCCCGCCT +
Preference number: 2 (lower is better)
Translates to: LGRASLSCARSGFLEAEVLPEQP*PMSPPP
Trigger: AGGCGGGGGTGACATGGGCCACGGTTGCTCTGGGAG...AACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGGCACCCCGAGAATGGTaGGGGCATCTTCAGGAGCGG +
Preference number: 2 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQAPREW*GHLQER
Trigger: CCGCTCCTGAAGATGCCCCCACCATTCTCGGGGTGC...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CAA 90 bp CGGCAACTCTGGCAGACCCACAGAGGCATCTCGCCTAGGAGATTCTaGACGAGCTTTGGCATGAAGTCAGGGGGCAGCTTCTCACCCTGC +
Preference number: 2 (lower is better)
Translates to: RQLWQTHRGISPRRF*TSFGMKSGGSFSPC
Trigger: GCAGGGTGAGAAGCTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTGCCAGAGTTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR GCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGGCTCAGGCAGCTCCTaGTTGCAACTGGGAACTTCC +
Preference number: 2 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRGSGSS*LQLGTS
Trigger: GGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGAGCC...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp AGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGGAAGCTCTAGGACCCTaGCTGGCTGCTTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: STEGLGRVGGAHGGKNYTEALGP*LAAWGQ
Trigger: CTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTC...CGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GGGGAAAGCCTCACCGGGGATGGTAGGAGGACTCCCAAGAGAGCTGCCTGGCATCAAGGAGATCGCCACTaGATGTTCTCGACCTGTCTG +
Preference number: 2 (lower is better)
Translates to: GESLTGDGRRTPKRAAWHQGDRH*MFSTCL
Trigger: CAGACAGGTCGAGAACATGCAGTGGCGATCTCCTTG...ATGCCAGGCAGCTCTCTTGGGAGTCCTCCTACCATCCCCGGTGAGGCTTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 2 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSEHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGAGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 2 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGEHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGGCCCCAGCACAGTGTaGCATCCGTTCAGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRGPSTV*HPFSFW
Trigger: CCAAAAGCTGAACGGATGCCACACTGTGCTGGGGCC...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp CTGGGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTTCATCCACATCTCGGTaGTCCACGGCGGGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: LGRASLSCARSGFLEAEVSSTSR*STAGSP
Trigger: TGGGGAGCCCGCCGTGGACCACCGAGATGTGGATGA...AACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp GTCTTGACCCAGATCACCCGGGATAGGTTGGGCACGGTGTTGAGTCTCCTCACGCACCTCTGTCCATGGTaGGTGGGGGCCTCTCATTTC +
Preference number: 2 (lower is better)
Translates to: VLTQITRDRLGTVLSLLTHLCPW*VGASHF
Trigger: GAAATGAGAGGCCCCCACCCACCATGGACAGAGGTG...CGTGAGGAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp TTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGGCCCCGTCCATGTCCTTaGGCAGGAACACATCGTCCA +
Preference number: 2 (lower is better)
Translates to: LISCRRLLRKLLTRSSSRPRPCP*AGTHRP
Trigger: TGGACGATGTGTTCCTGCCCAAGGACATGGACGGGG...CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTCAGGAGCGGCATGCTaGTGGAGGGTAGATGGGAGC +
Preference number: 2 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSSGAAC*WRVDGS
Trigger: GCTCCCATCTACCCTCCACCAGCATGCCGCTCCTGA...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGGCTGCACCCCGAGAATaGTGGGGGCATCTTCAGGAG +
Preference number: 2 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQAAPRE*WGHLQE
Trigger: CTCCTGAAGATGCCCCCACCATTCTCGGGGTGCAGC...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CAA 90 bp GCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAAACACGATTaGCCTGCTTTAGAGCTTCTGCTGCCAACTGGGCCTTCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: ASPWQALAPGFQKHD*PALELLLPTGPSPF
Trigger: AAAAGGAGAAGGCCCAGTTGGCAGCAGAAGCTCTAAAGCAGGCAAATCGTGTTTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 90 bp TTGACAGTGTTTTTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTaGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: LTVFLISCRRLLRKL*TRSSSRSGHSKSLS
Trigger: GGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACACTGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp GGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTTGGGCAGGGCCTCACTaGGCTGTGCTAGGAGTGGTT +
Preference number: 2 (lower is better)
Translates to: GLGRVGGAHGGKNYTPSAWAGPH*AVLGVV
Trigger: AACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCA...AGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
3UTR-3UTR GCA 90 bp CCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGCCAGCCCACTTCTTCCCAGCCTTTaGGTTCCCGGTGACACAGCA +
Preference number: 2 (lower is better)
Translates to: PVSPGAALLLLSFGTASPLLPSL*VPGDTA
Trigger: TGCTGTGTCACCGGGAACGCAAAGGCTGGGAAGAAG...TGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR GCA 90 bp GGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCAAACTTGTGCCCCTTaGACCCGGGATCCCTGTGAG +
Preference number: 2 (lower is better)
Translates to: GRWGTRREKLYAFSWQSGQTCAP*TRDPCE
Trigger: CTCACAGGGATCCCGGGTGCAAGGGGCACAAGTTTG...CCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAAAGTTTCGCCAGGAGCTaGCCTTCTCCTTCTCAGTTT +
Preference number: 2 (lower is better)
Translates to: GGEHRGSWTGRWGTRREKSFARS*PSPSQF
Trigger: AAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACT...TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp GTTCTCGACCTGTCTGCCTTTCATCTTCCTCCATGCTCTTTCGGCAACTCTGGCATCTCAAGGTCGGGGTaGGCTGCCTTGCGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: VLDLSAFHLPPCSFGNSGISRSG*AALRSR
Trigger: CCTGCTCCGCAAGGCAGCCCACCCCGACCTTGAGAT...GCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAAGGCAGACAGGTCGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR CCA 90 bp AGCCTCCCAGAGTCCCCTGCTGCCCGATGCAGTGTCTGCAGAGCCAAACGCATCGCAAGCTGGAAGCTTTaGGGAATCCTCCTACTGTTC +
Preference number: 2 (lower is better)
Translates to: SLPESPAARCSVCRAKRIASWKL*GILLLF
Trigger: GAACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGC...GATGCGTTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR CCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGTTATACGCCTTCAGCTaGCAGTCAGGGCCTCAGGAC +
Preference number: 2 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRLYAFS*QSGPQD
Trigger: GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAA...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGTCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAA +
Preference number: 2 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRSWTGR*GTRREK
Trigger: TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp CCTGCAACACCAGTCCATTTTGAGAAGGGCCTTCTTCCCAGCCTTTGCGTTCCCGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 2 (lower is better)
Translates to: PATPVHFEKGLLPSLCVPEHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...GGGAACGCAAAGGCTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp CACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAGGCCACGTTCAGCTTTTGGTTaGTCCAGGATGGTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: HKESSVGPAVPSALALRPRSAFG*SRMVGS
Trigger: GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG...TGGCCTAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp ATGTGCCGACAGGAACGAGCTAGGATCCCAGTCTCCCGAGTTCCCAGGGCAGGAGCTGGCTGTCACACTTaGGGGACTGAGAGCCTTTTT +
Preference number: 2 (lower is better)
Translates to: MCRQERARIPVSRVPRAGAGCHT*GTESLF
Trigger: AAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGC...TCCTGCCCTGGGAACTCGGGAGACTGGGATCCTAGCTCGTTCCTGTCGGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CAA 90 bp CATGAAGTCAGGGGGCAGCTTCTCACCCTGCAACACCAGTCCATTTaGAGAAGGGCCTTCTTCCCAGCCTTTGCGTTCCCGGTGACACAG +
Preference number: 2 (lower is better)
Translates to: HEVRGQLLTLQHQSI*RRAFFPAFAFPVTQ
Trigger: CTGTGTCACCGGGAACGCAAAGGCTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCCCCCTGACTTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR CAA 90 bp CCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACTGAGAGCCTTTTaGCTTCCACTCTGCCTTCATCACTCCCAAGCGTTCACTTCTCTG +
Preference number: 2 (lower is better)
Translates to: PVPRLAVTLGGLRAF*LPLCLHHSQAFTSL
Trigger: CAGAGAAGTGAACGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp GCTCGCCTGGAGCTTGTAACGTGTGGTTCTGAGGGGAGCCCAAAGTCAAAGGGGTCACACTTGGGGGACTaGGAGCCTTTTTGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: ARLELVTCGSEGSPKSKGSHLGD*EPFCFH
Trigger: GTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGA...CCCCTTTGACTTTGGGCTCCCCTCAGAACCACACGTTACAAGCTCCAGGCGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp GTCTTGACCCAGATCACCCGGGATAGGTTGGGCACGGTGTTGAGTCTCCTCACGTCACACTTGGGGGACTaGGAGCCTTTTTGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: VLTQITRDRLGTVLSLLTSHLGD*EPFCFH
Trigger: GTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGA...CGTGAGGAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp AGGGGGCAGCTTCTCACCCTGCAACACCAGTCCATTTTGAGAAGGGCCTTCTTCTCCCCTGCTGCCCGATaGAGTGTCTGCAGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: RGQLLTLQHQSILRRAFFSPAAR*SVCRAK
Trigger: TTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGA...GAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR GCA 90 bp ACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCACTGTGTGCAAACTTGTaGCCCTTGCACCCGGGATCC +
Preference number: 2 (lower is better)
Translates to: TGRWGTRREKLYAFSWQSLCANL*PLHPGS
Trigger: GGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAG...TGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp CTCACACACACTGAAGCTGGCACGGATGGAGTCTTTGACAGTGTTTTTGATCTCACCCAGCCCCTCATCTaGCTCGCAGGGCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: LTHTEAGTDGVFDSVFDLTQPLI*LAGLGQ
Trigger: CTGCCCCAGCCCTGCGAGGCAGATGAGGGGCTGGGT...GAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAGTGTGTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GCAGAATCCAAACAGAACCTCTTAAAGTACTCCACCTCTCGGTCAGTCTCATCCTCCTGGCGCCGTCTGTaGTCACGGCCTGTCCCTCGG +
Preference number: 2 (lower is better)
Translates to: AESKQNLLKYSTSRSVSSSWRRL*SRPVPR
Trigger: CCGAGGGACAGGCCGTGAGCACAGACGGCGCCAGGA...GGATGAGACTGACCGAGAGGTGGAGTACTTTAAGAGGTTCTGTTTGGATTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTCTCAGTTTTGGGACTaGCAGCCCAACCTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSSQFWD*QPNLVL
Trigger: CAGGACCAGGTTGGGCTGGCAGTCCCAAAACTGAGA...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGAAGAAGGGCAGGTTCTaGTGGGTTTCCACCTCAGTG +
Preference number: 2 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRKKGRF*WVSTSV
Trigger: CACTGAGGTGGAAACCCAGCAGAACCTGCCCTTCTT...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp GCTCGCCTGGAGCTTGTAACGTGTGGTTCTGAGGGGAGCCCAAAGTCAAAGGGGAGGATTCTCCAAACCTaGGATCTCAAGGTCGGGGTG +
Preference number: 2 (lower is better)
Translates to: ARLELVTCGSEGSPKSKGRILQT*DLKVGV
Trigger: CACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCT...CCCCTTTGACTTTGGGCTCCCCTCAGAACCACACGTTACAAGCTCCAGGCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGATTATACGCCTTCAGCTaGCAGTCAGGGCCTCAGGAC +
Preference number: 2 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGLYAFS*QSGPQD
Trigger: GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAA...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACATTATACGCCTTCAGCTaGCAGTCAGGGCCTCAGGAC +
Preference number: 2 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTLYAFS*QSGPQD
Trigger: GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAA...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAA +
Preference number: 2 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSSWTGR*GTRREK
Trigger: TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGTTCAGCTTTTGGTTaGTCCAGGATGGTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGRSAFG*SRMVGS
Trigger: GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp TTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGGCAAAGAGAGCAGTGTTaGGCCAGCAGTACCATCAGC +
Preference number: 2 (lower is better)
Translates to: LISCRRLLRKLLTRSSSRQREQC*ASSTIS
Trigger: GCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTG...CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACATTCCCATCTCTCTGGTaGGTGGAGGATGAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTFPSLW*VEDEVQ
Trigger: CTGCACCTCATCCTCCACCCACCAGAGAGATGGGAA...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp CTTATGTGCCGACAGGAACGAGCTAGGATCCCAGTCTCCCGAGTTCCCAGGGCAAACACCAGTCCATTTTaGGAAGGGCCTTCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: LMCRQERARIPVSRVPRANTSPF*EGPSSQ
Trigger: CTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTT...TGCCCTGGGAACTCGGGAGACTGGGATCCTAGCTCGTTCCTGTCGGCACATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR TCA 90 bp GGGGAAAGCCTCACCGGGGATGGTAGGAGGACTCCCAAGAGAGCTGCCTGGCATTTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: GESLTGDGRRTPKRAAWHFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...ATGCCAGGCAGCTCTCTTGGGAGTCCTCCTACCATCCCCGGTGAGGCTTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR TCA 90 bp TTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGGGAAGACGAGGACGAATaGGAGTCATCTCCACAAGAC +
Preference number: 2 (lower is better)
Translates to: LISCRRLLRKLLTRSSSREDEDE*ESSPQD
Trigger: GTCTTGTGGAGATGACTCTCATTCGTCCTCGTCTTC...CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR GCA 90 bp ATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTAAGGTCGGGGTGGGCTaGCTTGCGGAGCAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: ISFAQKKVTFFQVASWKLKVGVG*LAEQGR
Trigger: CCTCCCCTGCTCCGCAAGGCAGCCCACCCCGACCTT...AAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR GCA 90 bp ACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGGCTCCCGTTATCTCCTTTaGTCAAAAGAAAGTGACCTT +
Preference number: 2 (lower is better)
Translates to: TVLSLLTSPFSGTIPGGGSRYLL*SKESDL
Trigger: AAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGA...GCCCCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR GCA 90 bp ACGCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCTGCAGGAGCTCCCGTTATCTCCTTTaGTCAAAAGAAAGTGACCTT +
Preference number: 2 (lower is better)
Translates to: TPHPHPAPHPTLQDSCRSSRYLL*SKESDL
Trigger: AAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGA...GCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR GCA 90 bp CAGACCCACAGAGGCATCTCGCCTAGGAGATTCTTGACGAGCTTTGGCATGAAGACTCCTGCAGGAGCCTaGCTTCCTCCCGTTATCTCC +
Preference number: 2 (lower is better)
Translates to: QTHRGISPRRFLTSFGMKTPAGA*LPPVIS
Trigger: GGAGATAACGGGAGGAAGGCAGGCTCCTGCAGGAGT...CTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507587.1
3UTR-3UTR GCA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGCCCAGAGTCCCCTGCTaGCCGATGCAGTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: LCSKESDLLPGGKLEALGPRVPC*PMQCLQ
Trigger: CTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGG...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR GCA 90 bp TGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAACAGACAGTGCCCACCACAGTaGCCGCTGCAGGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: WSSSQQLSDESALQNPNRQCPPQ*PLQGWL
Trigger: CAGCCACCCCTGCAGCGGGCACTGTGGTGGGCACTG...TCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGAGCTTCGCTCAGAGCTaGTATCCTCTTCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRSFAQS*YPLPHP
Trigger: TGGGTGAGGAAGAGGATAGCAGCTCTGAGCGAAGCT...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGGGTTTCCACCTCAGTaGAGAAACCCCACCAAAAAC +
Preference number: 2 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRGFPPQ*RNPTKN
Trigger: GTTTTTGGTGGGGTTTCTGCACTGAGGTGGAAACCC...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp CTTATGTGCCGACAGGAACGAGCTAGGATCCCAGTCTCCCGAGTTCCCAGGGCAGCAAGCTGGAAGCTTTaGGGAATCCTCCTACTGTTC +
Preference number: 2 (lower is better)
Translates to: LMCRQERARIPVSRVPRAASWKL*GILLLF
Trigger: GAACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGC...TGCCCTGGGAACTCGGGAGACTGGGATCCTAGCTCGTTCCTGTCGGCACATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGCAAAGAGAGCAGTGTTaGGCCAGCAGTACCATCAGC +
Preference number: 2 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQQREQC*ASSTIS
Trigger: GCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTG...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR TCA 90 bp CAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAATCCTCCCTTTGCGTTCCCGGTaGCACAGCAGGCAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: QKKVTFFQVASWKLWGILPLRSR*HSRQQV
Trigger: GACTTGCTGCCTGCTGTGTCACCGGGAACGCAAAGG...GAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR TCA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGCCTTTGCGTTCCCGGTaGCACAGCAGGCAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: LCSKESDLLPGGKLEALGPLRSR*HSRQQV
Trigger: GACTTGCTGCCTGCTGTGTCACCGGGAACGCAAAGG...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR GCA 90 bp CAGACCCACAGAGGCATCTCGCCTAGGAGATTCTTGACGAGCTTTGGCATGAAGGCCCGATGCAGTGTCTaGAGAGCCAAACGCATCTTC +
Preference number: 2 (lower is better)
Translates to: QTHRGISPRRFLTSFGMKARCSV*RAKRIF
Trigger: GAAGATGCGTTTGGCTCTGCAGACACTGCATCGGGC...CTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR GCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAAGCTTCGCTCAGAGCTaGTATCCTCTTCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLSFAQS*YPLPHP
Trigger: TGGGTGAGGAAGAGGATAGCAGCTCTGAGCGAAGCT...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp GAGCCCAAAGTCAAAGGGGACAGGTCAAGGTTGATGTCAGGCTGCTGCTCTGAGGCTGGCTGTCACACTTaGGGGACTGAGAGCCTTTTT +
Preference number: 2 (lower is better)
Translates to: EPKVKGDRSRLMSGCCSEAGCHT*GTESLF
Trigger: AAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGC...CTCAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCCCTTTGACTTTGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp GCAGAATCCAAACAGAACCTCTTAAAGTACTCCACCTCTCGGTCAGTCTCATCCCATTTCTGCCCATGGTaGGGCTGGCTCGCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: AESKQNLLKYSTSRSVSSHFCPW*GWLAWS
Trigger: GCTCCAGGCGAGCCAGCCCCACCATGGGCAGAAATG...GGATGAGACTGACCGAGAGGTGGAGTACTTTAAGAGGTTCTGTTTGGATTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 90 bp TCACACACACTGAAGCTGGCACGGATGGAGTCTTTGACAGTGTTTTaGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCC +
Preference number: 2 (lower is better)
Translates to: SHTLKLARMESLTVF*ISCRRLLRKLLTRS
Trigger: GGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAGTGTGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 90 bp TCCATGCTGAGCTCACACACACTGAAGCTGGCACGGATGGAGTCTTaGACAGTGTTTTTGATCTCCTGCAGACGGCTGCTCAGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: SMLSSHTLKLARMES*TVFLISCRRLLRKL
Trigger: CAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAGTGTGTGTGAGCTCAGCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp CTCACACACACTGAAGCTGGCACGGATGGAGTCTTTGACAGTGTTTTTGATCTCGGGTGGAGGATGAGGTaGAGGAGCTTCGCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LTHTEAGTDGVFDSVFDLGWRMR*RSFAQS
Trigger: GCTCTGAGCGAAGCTCCTGCACCTCATCCTCCACCC...GAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAGTGTGTGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp GGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACTTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: GTRREKLYAFSWQSGPQDFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
3UTR-3UTR TCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGTTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
3UTR CAA 90 bp TGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTaGGGGAATCCTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: CSKESDLLPGGKLEA*GNPPTVRSQQDSPN
Trigger: GTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR TCA 90 bp CAGACCCACAGAGGCATCTCGCCTAGGAGATTCTTGACGAGCTTTGGCATGAAGTTGCTCAAAAGAAAGTaGCCTTCTTCCAGGTGGCAA +
Preference number: 2 (lower is better)
Translates to: QTHRGISPRRFLTSFGMKLLKRK*PSSRWQ
Trigger: TTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAA...CTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR GCA 90 bp CAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGGGCCGAGAGCGGAGCTaGGGCCTCGGGATCACAGCC +
Preference number: 2 (lower is better)
Translates to: QMLLYLSARKIFTVSKVKGRERS*GLGITA
Trigger: GGCTGTGATCCCGAGGCCGCAGCTCCGCTCTCGGCC...CTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp CTGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAATGCCCGCTGCAGGGGTaGCTGCACCCCGAGAATGGT +
Preference number: 2 (lower is better)
Translates to: LCPNVALSFGTKDLHSIKCPLQG*LHPENG
Trigger: ACCATTCTCGGGGTGCAGCCACCCCTGCAGCGGGCA...TTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp TTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGAATTGGACCCAGCCCCTCATCTaGCTCGCAGGGCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: LLYLSARKIFTVSKVKNWTQPLI*LAGLGQ
Trigger: CTGCCCCAGCCCTGCGAGGCAGATGAGGGGCTGGGT...CCAATTCTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp CAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAATCCTCTTTTTGCTTCCACTCTaGCTTCATCACTCCCAAGCG +
Preference number: 2 (lower is better)
Translates to: QKKVTFFQVASWKLWGILFLLPL*LHHSQA
Trigger: CGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAA...GAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CCA 90 bp CAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGTCTGCCTCGCAGGGCTaGGGCAGCTGGCAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: QMLLYLSARKIFTVSKVKSASQG*GSWQAR
Trigger: CCTGGCTTGCCAGCTGCCCCAGCCCTGCGAGGCAGA...CTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp GCCTTCATCACTCCCAAGCGTTCACTTCTCTGGGATTACACACGTATACATACTAACTTCCCATCTCTCTaGTGGGTGGAGGATGAGGTG +
Preference number: 2 (lower is better)
Translates to: AFITPKRSLLWDYTRIHTNFPSL*WVEDEV
Trigger: CACCTCATCCTCCACCCACCAGAGAGATGGGAAGTT...AGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGTTGCTCAAAAGAAAGTaGCCTTCTTCCAGGTGGCAA +
Preference number: 2 (lower is better)
Translates to: LCSKESDLLPGGKLEALGLLKRK*PSSRWQ
Trigger: TTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAA...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR CCA 90 bp CTGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 2 (lower is better)
Translates to: LCPNVALSFGTKDLHSIKEHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...TTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
3UTR-3UTR GCA 90 bp TGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGGGTGGAGGATGAGGTaGAGGAGCTTCGCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: CVQMLLYLSARKIFTVSKGWRMR*RSFAQS
Trigger: GCTCTGAGCGAAGCTCCTGCACCTCATCCTCCACCC...TTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR GCA 90 bp GCCTTCATCACTCCCAAGCGTTCACTTCTCTGGGATTACACACGTATACATACTTTTTTGCTTCCACTCTaGCTTCATCACTCCCAAGCG +
Preference number: 2 (lower is better)
Translates to: AFITPKRSLLWDYTRIHTFLLPL*LHHSQA
Trigger: CGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAA...AGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CCA 90 bp GTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTTGGTTGGTCCAGGATaGTGGGGAGCACAGAGGGTC +
Preference number: 2 (lower is better)
Translates to: VSKCCFIFRHERSSQYQKLVGPG*WGAQRV
Trigger: GACCCTCTGTGCTCCCCACCATCCTGGACCAACCAA...CTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTTTGGTTGGTCCAGGATaGTGGGGAGCACAGAGGGTC +
Preference number: 2 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSLVGPG*WGAQRV
Trigger: GACCCTCTGTGCTCCCCACCATCCTGGACCAACCAA...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CCA 90 bp CAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGGTTGGTCCAGGATGGTaGGGAGCACAGAGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: QMLLYLSARKIFTVSKVKVGPGW*GAQRVL
Trigger: CAAGACCCTCTGTGCTCCCCACCATCCTGGACCAAC...CTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR GCA 90 bp CTGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAACATTTCCTTTCCTTTTaGCGCATTGTGGCCGAAGAA +
Preference number: 2 (lower is better)
Translates to: LCPNVALSFGTKDLHSIKHFLSF*RIVAEE
Trigger: TTCTTCGGCCACAATGCGGCAAAAGGAAAGGAAATG...TTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR TCA 90 bp TTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGAATTGGTTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: LLYLSARKIFTVSKVKNWFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...CCAATTCTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
3UTR-3UTR CAA 90 bp GTTGCGGCTCCGGCGGCTGCGGCCCTTGCCCTGGGGCAAGCTCTGTGGCCTTGCGGCTTCTCCTGCTTGTaGCGGCTCCGGCGGCTGCGG +
Preference number: 3 (lower is better)
Translates to: VAAPAAAALALGQALWPCGFSCL*RLRRLR
Trigger: CCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCC...GCAAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCGGAGCCGCAAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CTGAGGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCCGGCGGCTGCGGCCCTaGCCCTGGGGCAAGCTCTGT +
Preference number: 3 (lower is better)
Translates to: LRAAQTPAPEAVPWPRLARRLRP*PWGKLC
Trigger: ACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCG...GGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CCGTCTGTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACTGAGGCGGCCCTGGCGCTGTaGGGGACTTTGGGCTCCGTG +
Preference number: 3 (lower is better)
Translates to: PSVLTACPSAGCHTWGTEAALAL*GTLGSV
Trigger: CACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC...CTCAGTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCACAGACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp GTTGCGGCTCCGGCGGCTGCGGCCCTTGCCCTGGGGCAAGCTCTGTGGCCTTGCACCCCGTCCATGTCCTaGGGCAGGAACACATCGTCC +
Preference number: 3 (lower is better)
Translates to: VAAPAAAALALGQALWPCTPSMS*GRNTSS
Trigger: GGACGATGTGTTCCTGCCCAAGGACATGGACGGGGT...GCAAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCGGAGCCGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 72 bp GGGGCAGTGGCAGCAGCAACAGGGCACTCTGAAGCCTaGGCAGGGAAAGGTGCTGCCGGGGTGGTGGGCAGC +
Preference number: 3 (lower is better)
Translates to: GAVAAATGHSEA*AGKGAAGVVGS
Trigger: GCTGCCCACCACCCCGGCAGCACCTTTCCCTGCCCAGGCTTCAGAGTGCCCTGTTGCTGCTGCCACTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 72 bp AGGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTaGCCTCGCCTGGCCAGTTTCGCCAGGAGCTGCCCT +
Preference number: 3 (lower is better)
Translates to: RAAQTPAPEAVP*PRLASFARSCP
Trigger: AGGGCAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 72 bp GCAGGGCTGGGGCAGCTGGCAAGCCAGGCCACTGTGTaGAAACTTGTGCCCCTTGCACCCGGGATCCCTGTG +
Preference number: 3 (lower is better)
Translates to: AGLGQLASQATV*KLVPLAPGIPV
Trigger: CACAGGGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR GCA 72 bp AGGAACACATCGTCCAAGGAGGAGGCTGGCTTCTCCTaGTTGTTGCGGCTCCGGCGGCTGCGGCCCTTGCCC +
Preference number: 3 (lower is better)
Translates to: RNTSSKEEAGFS*LLRLRRLRPLP
Trigger: GGGCAAGGGCCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTCCTCCTTGGACGATGTGTTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 72 bp CCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCTaGAGGAGCCTGCCTTCCTGGGCAGGCTCAGCCAAA +
Preference number: 3 (lower is better)
Translates to: PHPAPHPTLQDS*RSLPSWAGSAK
Trigger: TTTGGCTGAGCCTGCCCAGGAAGGCAGGCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CAA 90 bp CTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTCTGCTCAGGAAGCTGTaGACCCGATCCAGTTCCCGG +
Preference number: 3 (lower is better)
Translates to: LLRPCLGLAWPVSPGAALLLRKL*TRSSSR
Trigger: CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAG...AAGGGCAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR TCA 72 bp GCTCCTCGGAGCTGGGGTAGCCCGGCTTGGGTGTCTTaGCCCAGATCACCCGGGATAGGTTGGGCACGGTGT +
Preference number: 3 (lower is better)
Translates to: APRSWGSPAWVS*PRSPGIGWARC
Trigger: ACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGGGCTACCCCAGCTCCGAGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 72 bp CCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTaGCAGGCCTTGGCTCCCGGCTTCCAGAAACACGAT +
Preference number: 3 (lower is better)
Translates to: PVPGRATPRASP*QALAPGFQKHD
Trigger: ATCGTGTTTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 72 bp GTCCTTGGGCAGGAACACATCGTCCAAGGAGGAGGCTaGCTTCTCCTGCTTGTTGCGGCTCCGGCGGCTGCG +
Preference number: 3 (lower is better)
Translates to: VLGQEHIVQGGG*LLLLVAAPAAA
Trigger: CGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 72 bp CCAGCCCCGAGTGCCACAACCCTCCCAGAGCAACCGTaGCCCATGTCACCCCCGCCTCTCAGTGAACTTTGG +
Preference number: 3 (lower is better)
Translates to: PAPSATTLPEQP*PMSPPPLSELW
Trigger: CCAAAGTTCACTGAGAGGCGGGGGTGACATGGGCCACGGTTGCTCTGGGAGGGTTGTGGCACTCGGGGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CAA 90 bp TCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTGCATCCGTTCAGCTTTaGGTTGGTCCAGGATGGTGG +
Preference number: 3 (lower is better)
Translates to: SRSGHSKSLSLAGLGSRLASVQL*VGPGWW
Trigger: CCACCATCCTGGACCAACCAAAAGCTGAACGGATGC...AAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTCCACTGTGTGCAAACTaGTGCCCCTTGCACCCGGGA +
Preference number: 3 (lower is better)
Translates to: HQPWPLGQPSPRALSVEAPLCAN*CPLHPG
Trigger: TCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGG...AGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp GTTGCGGCTCCGGCGGCTGCGGCCCTTGCCCTGGGGCAAGCTCTGTGGCCTTGCTTTCCTTTTGCCGCATaGTGGCCGAAGAACTCACAG +
Preference number: 3 (lower is better)
Translates to: VAAPAAAALALGQALWPCFPFAA*WPKNSQ
Trigger: CTGTGAGTTCTTCGGCCACAATGCGGCAAAAGGAAA...GCAAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCGGAGCCGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp GGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAAACGCGCTGTTGGGGACTTaGGGCTCCGTGCTGTTGATG +
Preference number: 3 (lower is better)
Translates to: GPLQEPLPGRPWLPASRNALLGT*GSVLLM
Trigger: CATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGC...GTTTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGAACCCTGCCTGGCTGCTaGGGGCCAGCGACCTGGCCC +
Preference number: 3 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGTLPGC*GPATWP
Trigger: GGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGT...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 72 bp AGCCTCCCAGAGTCCCCTGCTGCCCGATGCAGTGTCTaGAGAGCCAAACGCATCTTCCGCCACGCCTCATCC +
Preference number: 3 (lower is better)
Translates to: SLPESPAARCSV*RAKRIFRHASS
Trigger: GGATGAGGCGTGGCGGAAGATGCGTTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR GCA 72 bp GTGCCTTGGCCTCGCCTGGCCAGTTTCGCCAGGAGCTaGCCTTCTCCTTCTCAGTTTTGGGACTGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: VPWPRLASFARS*PSPSQFWDCQP
Trigger: GGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 72 bp ACCCCACCAAAAACTCCTCCGGGCAGCCTGGCTGTCTaGTCCAACTGCTCTGCTGGGTATGGCGAGGAGGCG +
Preference number: 3 (lower is better)
Translates to: TPPKTPPGSLAV*SNCSAGYGEEA
Trigger: CGCCTCCTCGCCATACCCAGCAGAGCAGTTGGAGCAGACAGCCAGGCTGCCCGGAGGAGTTTTTGGTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 72 bp CGCCGCATCCGACCCTCCAAGACTCCTGCAGGAGCCTaGCTTCCTGGGCAGGCTCAGCCAAAAGACCAACTC +
Preference number: 3 (lower is better)
Translates to: RRIRPSKTPAGA*LPGQAQPKDQL
Trigger: GAGTTGGTCTTTTGGCTGAGCCTGCCCAGGAAGGCAGGCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 72 bp CTGTTGATGAATTCCAGCAGCTCATCCACATCTCGGTaGTCCACGGCGGGCTCCCCAGGGATCCCGCCCAGG +
Preference number: 3 (lower is better)
Translates to: LLMNSSSSSTSR*STAGSPGIPPR
Trigger: CCTGGGCGGGATCCCTGGGGAGCCCGCCGTGGACCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 72 bp CTACTTTGGGAAGCTCTAGGACCCTGCCTGGCTGCTTaGGGCCAGCGACCTGGCCCTTGGCACTGGGAACCT +
Preference number: 3 (lower is better)
Translates to: LLWEALGPCLAA*GQRPGPWHWEP
Trigger: AGGTTCCCAGTGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCCCAAAGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCGGCTTCTCCTGCTTGTaGCGGCTCCGGCGGCTGCGG +
Preference number: 3 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSGFSCL*RLRRLR
Trigger: CCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCC...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CACCCAGCCCCGAGTGCCACAACCCTCCCAGAGCAACCGTGGCCCATGTCACCCGGCAAGCTGGAAGCTTaGGGGAATCCTCCTACTGTT +
Preference number: 3 (lower is better)
Translates to: HPAPSATTLPEQPWPMSPGKLEA*GNPPTV
Trigger: AACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGCC...GGGTGACATGGGCCACGGTTGCTCTGGGAGGGTTGTGGCACTCGGGGCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CAA 90 bp GGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTTGGCAACAAAGAGAGCAGTGTaGGGCCAGCAGTACCATCAG +
Preference number: 3 (lower is better)
Translates to: GSSRTLPGCLGPATWPLATKRAV*GQQYHQ
Trigger: CTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGT...TGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CTCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTTCCTTCTTTTTCAGCTaGTGCCGGGCCCGCTTGGCG +
Preference number: 3 (lower is better)
Translates to: LTSVHGGWGPLISAHGGASFFFS*CRARLA
Trigger: CGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAAGGA...AGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 72 bp ACCCCGAGAATGGTGGGGGCATCTTCAGGAGCGGCATaGTGGTGGAGGGTAGATGGGAGCTCTGACATGGCC +
Preference number: 3 (lower is better)
Translates to: TPRMVGASSGAA*WWRVDGSSDMA
Trigger: GGCCATGTCAGAGCTCCCATCTACCCTCCACCAGCATGCCGCTCCTGAAGATGCCCCCACCATTCTCGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 72 bp AAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTaGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGT +
Preference number: 3 (lower is better)
Translates to: KRAVLGQQYHQP*PLGQPSPRALS
Trigger: ACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR CCA 72 bp AGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTaGGACTGCCAGCCCAACCTGGTCCTGGCCGGCTCC +
Preference number: 3 (lower is better)
Translates to: SFARSCPSPSQF*DCQPNLVLAGS
Trigger: GGAGCCGGCCAGGACCAGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CTCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTCCGTTCAGCTTTTGGTaGGTCCAGGATGGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: LTSVHGGWGPLISAHGGAPFSFW*VQDGGE
Trigger: CTCCCCACCATCCTGGACCAACCAAAAGCTGAACGG...AGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 72 bp GTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTaGGGGACTGAGAGCCTTTTTGCTTCCACTCTGCCT +
Preference number: 3 (lower is better)
Translates to: VLTACPSAGCHT*GTESLFASTLP
Trigger: AGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp ACGCATCTTCCGCCACGCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGCTAGGAGTGGTTTTCTaGAGGCTGAAGTTGGTCCAG +
Preference number: 3 (lower is better)
Translates to: THLPPRLILIRRRIRPSKLGVVF*RLKLVQ
Trigger: CTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAG...CTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGCGTGGCGGAAGATGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CAA 90 bp CCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGCCAGCCCAGCGCTGTTGGGGACTTaGGGCTCCGTGCTGTTGATG +
Preference number: 3 (lower is better)
Translates to: PVSPGAALLLLSFGTASPALLGT*GSVLLM
Trigger: CATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGC...TGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTTCTTTGACAGTGTTTTaGATCTCCTGCAGACGGCTG +
Preference number: 3 (lower is better)
Translates to: LLRPCLGLAWPVSPGAALSLTVF*ISCRRL
Trigger: CAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGA...AAGGGCAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTTCCTTAGAGAAGCCATaGCTGTCCATGCTGAGCTCA +
Preference number: 3 (lower is better)
Translates to: HQPWPLGQPSPRALSVEASLEKP*LSMLSS
Trigger: TGAGCTCAGCATGGACAGCAATGGCTTCTCTAAGGA...AGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCCCGGCTTGGGTGTCTaGACCCAGATCACCCGGGAT +
Preference number: 3 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPPGLGV*TQITRD
Trigger: ATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGGG...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR TCA 72 bp GGGGGCAGCTTCTCACCCTGCAACACCAGTCCATTTTaGGAAGGGCCTTCTTCCCAGCCTTTGCGTTCCCGG +
Preference number: 3 (lower is better)
Translates to: GGSFSPCNTSPF*EGPSSQPLRSR
Trigger: CCGGGAACGCAAAGGCTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR GCA 72 bp GGCTTCCCACCTGAGGACACAGGCTCAGGCAGCTCCTaGTTGCAACTGGGAACTTCCTTTGAGCTTGGCTCC +
Preference number: 3 (lower is better)
Translates to: GFPPEDTGSGSS*LQLGTSFELGS
Trigger: GGAGCCAAGCTCAAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGAGCCTGTGTCCTCAGGTGGGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 72 bp CTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACCTaGGATCTCAAGGTCGGGGTGGGCTGCCTTGCGGAG +
Preference number: 3 (lower is better)
Translates to: LLLFALSRILQT*DLKVGVGCLAE
Trigger: CTCCGCAAGGCAGCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR CAA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCCCACTGTGTGCAAACTaGTGCCCCTTGCACCCGGGA +
Preference number: 3 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGPLCAN*CPLHPG
Trigger: TCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGG...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp GGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTGGGCTCCGTGCTGTaGATGAATTCCAGCAGCTCA +
Preference number: 3 (lower is better)
Translates to: GGEHRGSWTGRWGTRREKLGSVL*MNSSSS
Trigger: TGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAA...TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp ACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGGCGCACGGATGGAGTCTTaGACAGTGTTTTTGATCTCC +
Preference number: 3 (lower is better)
Translates to: TVLSLLTSPFSGTIPGGGARMES*TVFLIS
Trigger: GGAGATCAAAAACACTGTCAAAGACTCCATCCGTGC...GCCCCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGCACAGCTGCCTACTTaGGGAAGCTCTAGGACCCTG +
Preference number: 3 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRAQLPT*GSSRTL
Trigger: CAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTGC...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTCGGGGTTTCACCAACTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPRGFTN*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGTTGGTGAAACCCCG...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507212.1
ENST00000513282.5
3UTR-3UTR CAA 90 bp TCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGGGACTGAGAGCCTTTTaGCTTCCACTCTGCCTTCAT +
Preference number: 3 (lower is better)
Translates to: SPLSMVGGGLSFLPMVGLGLRAF*LPLCLH
Trigger: ATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCC...CAGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CTCACACACACTGAAGCTGGCACGGATGGAGTCTTTGACAGTGTTTTTGATCTCGCGGCCCTGGCGCTGTaGGGGACTTTGGGCTCCGTG +
Preference number: 3 (lower is better)
Translates to: LTHTEAGTDGVFDSVFDLAALAL*GTLGSV
Trigger: CACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC...GAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAGTGTGTGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR TCA 72 bp GGCCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACTaGGAGCCTTTTTGCTTCCACTCTGCCTTCATCACT +
Preference number: 3 (lower is better)
Translates to: GLSLGWLSHLGD*EPFCFHSAFIT
Trigger: AGTGATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR TCA 72 bp AGAGCAACCGTGGCCCATGTCACCCCCGCCTCTCAGTaGACTTTGGCAGGGTACCTCCCGTTATCTCCTTTG +
Preference number: 3 (lower is better)
Translates to: RATVAHVTPASQ*TLAGYLPLSPL
Trigger: CAAAGGAGATAACGGGAGGTACCCTGCCAAAGTTCACTGAGAGGCGGGGGTGACATGGGCCACGGTTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 72 bp GGAAGAAGGGCAGGTTCTGCTGGGTTTCCACCTCAGTaGAGAAACCCCACCAAAAACTCCTCCGGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: GRRAGSAGFPPQ*RNPTKNSSGQP
Trigger: AGGCTGCCCGGAGGAGTTTTTGGTGGGGTTTCTGCACTGAGGTGGAAACCCAGCAGAACCTGCCCTTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 72 bp GATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAATTATACGCCTTCAGC +
Preference number: 3 (lower is better)
Translates to: DGGEHRGSWTGR*GTRREKLYAFS
Trigger: GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CAA 90 bp ACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGACGGGGTTTCACCAACTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: TVWHPFSFWLVQDGGEHRRGFTN*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGTTGGTGAAACCCCG...TCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513282.5
3UTR-3UTR CAA 90 bp AGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCGTTCAGCTTTTGGTaGGTCCAGGATGGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: STEGLGRVGGAHGGKNYTPFSFW*VQDGGE
Trigger: CTCCCCACCATCCTGGACCAACCAAAAGCTGAACGG...CGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR TCA 72 bp GTCACAGAACTTCCCATCTCTCTGGTGGGTGGAGGATaGGGTGCAGGAGCTTCGCTCAGAGCTGCTATCCTC +
Preference number: 3 (lower is better)
Translates to: VTELPISLVGGG*GAGASLRAAIL
Trigger: GAGGATAGCAGCTCTGAGCGAAGCTCCTGCACCTCATCCTCCACCCACCAGAGAGATGGGAAGTTCTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR GCA 72 bp CCAGTCCATTTTGAGAAGGGCCTTCTTCCCAGCCTTTaGGTTCCCGGTGACACAGCAGGCAGCAAGTCTGCA +
Preference number: 3 (lower is better)
Translates to: PVHFEKGLLPSL*VPGDTAGSKSA
Trigger: TGCAGACTTGCTGCCTGCTGTGTCACCGGGAACGCAAAGGCTGGGAAGAAGGCCCTTCTCAAAATGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR CCA 72 bp CCGTGGCCCATGTCACCCCCGCCTCTCAGTGAACTTTaGCAGGGTACCTCCCGTTATCTCCTTTGCTCAAAA +
Preference number: 3 (lower is better)
Translates to: PWPMSPPPLSEL*QGTSRYLLCSK
Trigger: TTTTGAGCAAAGGAGATAACGGGAGGTACCCTGCCAAAGTTCACTGAGAGGCGGGGGTGACATGGGCCACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR-3UTR CAA 90 bp CTGGGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGCATCCGTTCAGCTTTaGGTTGGTCCAGGATGGTGG +
Preference number: 3 (lower is better)
Translates to: LGRASLSCARSGFLEAEVASVQL*VGPGWW
Trigger: CCACCATCCTGGACCAACCAAAAGCTGAACGGATGC...AACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
3UTR-3UTR CAA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCACAAAGAGAGCAGTGTaGGGCCAGCAGTACCATCAG +
Preference number: 3 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSTKRAV*GQQYHQ
Trigger: CTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGT...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CAA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGACAAAGAGAGCAGTGTaGGGCCAGCAGTACCATCAG +
Preference number: 3 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQTKRAV*GQQYHQ
Trigger: CTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGT...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
3UTR-3UTR CAA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGGACTGAGAGCCTTTTaGCTTCCACTCTGCCTTCAT +
Preference number: 3 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRGLRAF*LPLCLH
Trigger: ATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCC...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTTCAGGCAGCTCCTGCTaGCAACTGGGAACTTCCTTT +
Preference number: 3 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPSGSSC*QLGTSF
Trigger: AAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGA...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 72 bp AGAACTTCCCATCTCTCTGGTGGGTGGAGGATGAGGTaGAGGAGCTTCGCTCAGAGCTGCTATCCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: RTSHLSGGWRMR*RSFAQSCYPLP
Trigger: AGGAAGAGGATAGCAGCTCTGAGCGAAGCTCCTGCACCTCATCCTCCACCCACCAGAGAGATGGGAAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp CACCCCGTCCATGTCCTTGGGCAGGAACACATCGTCCAAGGAGGAGGCTGGCTTTTCCAGAAACACGATTaGCCTGCTTTAGAGCTTCTG +
Preference number: 3 (lower is better)
Translates to: HPVHVLGQEHIVQGGGWLFQKHD*PALELL
Trigger: CAGAAGCTCTAAAGCAGGCAAATCGTGTTTCTGGAA...AAGCCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAAGGACATGGACGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR GCA 72 bp CATGTTCTCGACCTGTCTGCCTTTCATCTTCCTCCATaGTCTTTCGGCAACTCTGGCAGACCCACAGAGGCA +
Preference number: 3 (lower is better)
Translates to: HVLDLSAFHLPP*SFGNSGRPTEA
Trigger: TGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAAGGCAGACAGGTCGAGAACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR GCA 72 bp GCACGGATGGAGTCTTTGACAGTGTTTTTGATCTCCTaGAGACGGCTGCTCAGGAAGCTGTTGACCCGATCC +
Preference number: 3 (lower is better)
Translates to: ARMESLTVFLIS*RRLLRKLLTRS
Trigger: GGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGACTCCATCCGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 72 bp TGCCTTTCATCTTCCTCCATGCTCTTTCGGCAACTCTaGCAGACCCACAGAGGCATCTCGCCTAGGAGATTC +
Preference number: 3 (lower is better)
Translates to: CLSSSSMLFRQL*QTHRGISPRRF
Trigger: GAATCTCCTAGGCGAGATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR CAA 90 bp ATCTCGCCTAGGAGATTCTTGACGAGCTTTGGCATGAAGTCAGGGGGCAGCTTCGGCAAGCTGGAAGCTTaGGGGAATCCTCCTACTGTT +
Preference number: 3 (lower is better)
Translates to: ISPRRFLTSFGMKSGGSFGKLEA*GNPPTV
Trigger: AACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGCC...GAAGCTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR-3UTR CAA 90 bp GAGCCCAAAGTCAAAGGGGACAGGTCAAGGTTGATGTCAGGCTGCTGCTCTGAGCCATTTCCTTTCCTTTaGCCGCATTGTGGCCGAAGA +
Preference number: 3 (lower is better)
Translates to: EPKVKGDRSRLMSGCCSEPFPFL*PHCGRR
Trigger: TCTTCGGCCACAATGCGGCAAAAGGAAAGGAAATGG...CTCAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCCCTTTGACTTTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR GCA 72 bp TCCTGCAGGAGCCTGCCTTCCTCCCGTTATCTCCTTTaGTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAG +
Preference number: 3 (lower is better)
Translates to: SCRSLPSSRYLL*SKESDLLPGGK
Trigger: CTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGAGGAAGGCAGGCTCCTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507587.1
3UTR GCA 72 bp ACACTTGGGGGACTGAGAGCCTTTTTGCTTCCACTCTaGCTTCATCACTCCCAAGCGTTCACTTCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: TLGGLRAFLLPL*LHHSQAFTSLG
Trigger: TCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR-3UTR CAA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTTCCAGAAACACGATTaGCCTGCTTTAGAGCTTCTG +
Preference number: 3 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSFQKHD*PALELL
Trigger: CAGAAGCTCTAAAGCAGGCAAATCGTGTTTCTGGAA...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR TCA 72 bp GCCTTCCTCCCGTTATCTCCTTTGCTCAAAAGAAAGTaGCCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: AFLPLSPLLKRK*PSSRWQAGSFG
Trigger: CCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGAGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507587.1
3UTR TCA 72 bp GGGTACCTCCCGTTATCTCCTTTGCTCAAAAGAAAGTaGCCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: GYLPLSPLLKRK*PSSRWQAGSFG
Trigger: CCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGAGGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CCA 72 bp AAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTaGGGAATCCTCCTACTGTTCGCTCTCAGCAGGATT +
Preference number: 3 (lower is better)
Translates to: KVTFFQVASWKL*GILLLFALSRI
Trigger: AATCCTGCTGAGAGCGAACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR CCA 72 bp GCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTaGAAGCTTTGGGGAATCCTCCTACTGTTCGCTCTC +
Preference number: 3 (lower is better)
Translates to: AQKKVTFFQVAS*KLWGILLLFAL
Trigger: GAGAGCGAACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR GCA 72 bp AGTGAACTTTGGCAGGGTACCTCCCGTTATCTCCTTTaGTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAG +
Preference number: 3 (lower is better)
Translates to: SELWQGTSRYLL*SKESDLLPGGK
Trigger: CTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGAGGTACCCTGCCAAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 72 bp AGGACGAATGAGAGTCATCTCCACAAGACTGTGATTTaGAGGATGTGTGTGACAAGGAGATCGCCACTGCAT +
Preference number: 3 (lower is better)
Translates to: RTNESHLHKTVI*RMCVTRRSPLH
Trigger: ATGCAGTGGCGATCTCCTTGTCACACACATCCTGCAAATCACAGTCTTGTGGAGATGACTCTCATTCGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 72 bp GGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTaGAGAATCCAAACAGAACCTCTTAAAGTACTCCAC +
Preference number: 3 (lower is better)
Translates to: GPVHSNFLTSLL*RIQTEPLKVLH
Trigger: GTGGAGTACTTTAAGAGGTTCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CCA 72 bp CACTCTGCCTTCATCACTCCCAAGCGTTCACTTCTCTaGGATTACACACGTATACATACTCATCAGAATCAT +
Preference number: 3 (lower is better)
Translates to: HSAFITPKRSLL*DYTRIHTHQNH
Trigger: ATGATTCTGATGAGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGCAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
3UTR GCA 72 bp CACCTACAGTTGGAGTCATTTGGGCAAATGTTTAGTTaGTCTGAGTTTCTGTTTCTTCATATGCACAATTCC +
Preference number: 3 (lower is better)
Translates to: HLQLESFGQMFS*SEFLFLHMHNS
Trigger: GGAATTGTGCATATGAAGAAACAGAAACTCAGAGCAACTAAACATTTGCCCAAATGACTCCAACTGTAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR GCA 72 bp GGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTaGAGAATCCAAACAGAACCTTATTTTTCTATTTTT +
Preference number: 3 (lower is better)
Translates to: GPVHSNFLTSLL*RIQTEPYFSIF
Trigger: AAAAATAGAAAAATAAGGTTCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513282.5
CDS-3UTR GCA 90 bp GTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCGCTTCTCCTGCTTGTTaGGGCTCCGGCGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VPGRATPRASPWQALAPGASPAC*GSGGCG
Trigger: GCCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGC...GCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp TGCCGGGCCCGCTTGGCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGGGCCTGTCCCTCGGCTaGCTGTCACACTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: CRARLAALALLGTLGSVLGLSLG*LSHLGD
Trigger: GTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCC...CAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGGCCCGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCGGCCCTGGCGCTGTTaGGGACTTTGGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: PGRATPRASPWQALAPGFRPWRC*GLWAPC
Trigger: GCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCG...GAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGGTGCTAGGGAGTGGCTaGGAGCTCGGGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QPWPLGQPSPRALSVEAAVLGSG*ELGGGR
Trigger: CCTCCCACCCCCGAGCTCTCAGCCACTCCCTAGCAC...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR TCA 90 bp TGCCGGGCCCGCTTGGCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTCGCTCTTCTTGGCCTaGCTGCCCTGCCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: CRARLAALALLGTLGSVLSLFLA*LPCLLP
Trigger: GGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGAGCGA...CAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGGCCCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGGCTTCTCCTGCTTGTTaGGGCTCCGGCGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QPWPLGQPSPRALSVEAAASPAC*GSGGCG
Trigger: GCCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGC...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTGCTTCTCCTGCTTGTTaGGGCTCCGGCGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SRSGHSKSLSLAGLGSRLASPAC*GSGGCG
Trigger: GCCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGC...AAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GGCGCCGTCTGTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACGGCAGGGAAAGGTGCTaGCGGGGTGGTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GAVCAHGLSLGWLSHLGDGRERC*RGGGQQ
Trigger: CTGCTGCCCACCACCCCGGCAGCACCTTTCCCTGCC...GTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCACAGACGGCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GGCGCCGTCTGTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACCGGCCCTGGCGCTGTTaGGGACTTTGGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GAVCAHGLSLGWLSHLGDRPWRC*GLWAPC
Trigger: GCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCG...GTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCACAGACGGCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp TCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAAGGCCGAGAGCGGAGCTaGGGCCTCGGGATCACAGCC +
Preference number: 4 (lower is better)
Translates to: SGHSKSLSLAGLGSRLPEGRERS*GLGITA
Trigger: GGCTGTGATCCCGAGGCCGCAGCTCCGCTCTCGGCC...TTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp GGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTTGGCAAAGGTCGGGGTGGGCTaGCTTGCGGAGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSSRTLPGCLGPATWPLAKVGVG*LAEQGR
Trigger: CCTCCCCTGCTCCGCAAGGCAGCCCACCCCGACCTT...TGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCCGCTGCAGGGGTGGCTaGACCCCGAGAATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSALALRPAQSTGSECGGRCRGG*TPRMVG
Trigger: CCCCACCATTCTCGGGGTGCAGCCACCCCTGCAGCG...GCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CTGAGGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCAGAGGCCCACTGCAGTaGCCACCACAGTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: LRAAQTPAPEAVPWPRLARGPLQ*PPQCPL
Trigger: CAGCGGGCACTGTGGTGGGCACTGCAGTGGGCCTCT...GGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGAGAGGCCCACTGCAGTaGCCACCACAGTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QPWPLGQPSPRALSVEAARGPLQ*PPQCPL
Trigger: CAGCGGGCACTGTGGTGGGCACTGCAGTGGGCCTCT...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp GTTGCGGCTCCGGCGGCTGCGGCCCTTGCCCTGGGGCAAGCTCTGTGGCCTTGCGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: VAAPAAAALALGQALWPCEHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...GCAAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCGGAGCCGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAAACCTGCAGGGGACGGAGTaGAGCCGTTCCCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPLQEPLPGRPWLPASRNLQGTE*SRSRGQ
Trigger: CTGCCCCCGGGAACGGCTCCACTCCGTCCCCTGCAG...GTTTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp AGGCTGCAGTCGTCCAGTCCCAGAGCCCCGAGATGGCCTGTGGCTGAGGGAGCAGCTGGCTGCGGGTGGTaGCCGGTGGGGCTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: RLQSSSPRAPRWPVAEGAAGCGW*PVGLLG
Trigger: CCCTAACAGCCCCACCGGCCACCACCCGCAGCCAGC...TGCTCCCTCAGCCACAGGCCATCTCGGGGCTCTGGGACTGGACGACTGCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCATTTCTGCCCATGGTaGGGCTGGCTCGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGRATPRASPWQALAPGFHFCPW*GWLAWS
Trigger: GCTCCAGGCGAGCCAGCCCCACCATGGGCAGAAATG...GAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GTTGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCCTGCCTGGCTGCTTaGGGCCAGCGACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VDPIQFPVGPLQEPLPGRPCLAA*GQRPGP
Trigger: AGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGG...CCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GCCCAGTCCCAGTCCCAGTCCCAGTGTGGGTGTACGGCCGGAACGCCCGGAGGCACCCCCGCCTCTCAGTaGACTTTGGCAGGGTACCTC +
Preference number: 4 (lower is better)
Translates to: AQSQSQSQCGCTAGTPGGTPASQ*TLAGYL
Trigger: GAGGTACCCTGCCAAAGTTCACTGAGAGGCGGGGGT...GCCTCCGGGCGTTCCGGCCGTACACCCACACTGGGACTGGGACTGGGACTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp GGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTTGGCAGCATGCCCTCTGATCTaGGCCTCCTTCCTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GSSRTLPGCLGPATWPLAACPLI*ASFLAP
Trigger: CGGCGCCAGGAAGGAGGCTCAGATCAGAGGGCATGC...TGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCCCGGCTTGGGTGTCTTaGCCCAGATCACCCGGGATA +
Preference number: 4 (lower is better)
Translates to: VPGRATPRASPWQALAPGPAWVS*PRSPGI
Trigger: TATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGG...GCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp AGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGAAGCCTGCTCCTGAGGCCGTaGCTTGGCCTCGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RPAQSTGSECGGCVAPGSLLLRP*LGLAWP
Trigger: TGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAG...GCTTCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGCTGCTCCTGAGGCCGTaGCTTGGCCTCGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGLLLRP*LGLAWP
Trigger: TGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAG...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GTTGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGACCCAGCCCCTCATCTaGCTCGCAGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VDPIQFPVGPLQEPLPGRTQPLI*LAGLGQ
Trigger: CTGCCCCAGCCCTGCGAGGCAGATGAGGGGCTGGGT...CCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGGGCAGGGAAAGGTGCTaGCGGGGTGGTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VQDGGEHRGSWTGRWGTRGRERC*RGGGQQ
Trigger: CTGCTGCCCACCACCCCGGCAGCACCTTTCCCTGCC...CCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR GCA 90 bp GCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCTGCAGGAGCCTCGCTGCAGGGGTGGCTaGACCCCGAGAATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ASSSSGAASDPPRLLQEPRCRGG*TPRMVG
Trigger: CCCCACCATTCTCGGGGTGCAGCCACCCCTGCAGCG...AGGCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGACACCACAGTGCCCGCTaGAGGGGTGGCTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGHHSAR*RGGCTP
Trigger: CGGGGTGCAGCCACCCCTGCAGCGGGCACTGTGGTG...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp TGCCGGGCCCGCTTGGCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGCAAACTTGTGCCCCTTaGACCCGGGATCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: CRARLAALALLGTLGSVLQTCAP*TRDPCE
Trigger: CTCACAGGGATCCCGGGTGCAAGGGGCACAAGTTTG...CAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGGCCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp ACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGGCCCAAGAGCCTCTCCCTaGCAGGCCTTGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: TVLSLLTSPFSGTIPGGGPRASP*QALAPG
Trigger: GCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGG...GCCCCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGCCAAGAGCCTCTCCCTaGCAGGCCTTGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGPRASP*QALAPG
Trigger: GCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGG...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp ACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGGCGAGGCTGGCTTCTCCTaGTTGTTGCGGCTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: TVLSLLTSPFSGTIPGGGEAGFS*LLRLRR
Trigger: CCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTC...GCCCCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCACTCCTGCAGGAGCCTaGCTTCCTGGGCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSALALRPAQSTGSECGGTPAGA*LPGQAQ
Trigger: CTGAGCCTGCCCAGGAAGGCAGGCTCCTGCAGGAGT...GCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp GTTGCGGCTCCGGCGGCTGCGGCCCTTGCCCTGGGGCAAGCTCTGTGGCCTTGCCTTCTTCCCAGCCTTTaGGTTCCCGGTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: VAAPAAAALALGQALWPCLLPSL*VPGDTA
Trigger: TGCTGTGTCACCGGGAACGCAAAGGCTGGGAAGAAG...GCAAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCGGAGCCGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp TCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGCACCACAGTGCCCGCTaGAGGGGTGGCTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: SPLSMVGGGLSFLPMVGLHHSAR*RGGCTP
Trigger: CGGGGTGCAGCCACCCCTGCAGCGGGCACTGTGGTG...CAGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp TGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACCAGTGCCCACCACAGTaGCCGCTGCAGGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WSRMVGSTEGLGRVGGAHQCPPQ*PLQGWL
Trigger: CAGCCACCCCTGCAGCGGGCACTGTGGTGGGCACTG...GTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGACAGTGCCCACCACAGTaGCCGCTGCAGGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGQCPPQ*PLQGWL
Trigger: CAGCCACCCCTGCAGCGGGCACTGTGGTGGGCACTG...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTTCTTTTTCAGCTTGTaGCGGGCCCGCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: QPWPLGQPSPRALSVEAAFFFSL*RARLAA
Trigger: GGCCGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAA...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp TCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAACCTGAGGCCGTGCCTTaGCCTCGCCTGGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SGHSKSLSLAGLGSRLPEPEAVP*PRLASF
Trigger: GAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGG...TTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp ACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGGCCTGCGGCCCTTGCCCTaGGGCAAGCTCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TVLSLLTSPFSGTIPGGGLRPLP*GKLCGL
Trigger: AAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAG...GCCCCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp AGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGAAGCCAGGGCTGGGGCAGCTaGCAAGCCAGGCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: RPAQSTGSECGGCVAPGSQGWGS*QARPLC
Trigger: ACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTG...GCTTCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCGCTCCTCTTTCCGCCTaGTCAGCCTCGAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSALALRPAQSTGSECGGAPLSA*SASSGA
Trigger: AGCTCCGCTCGAGGCTGACCAGGCGGAAAGAGGAGC...GCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp CCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCGGCCCCAGCACAGTGTaGCATCCGTTCAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PGRATPRASPWQALAPGFGPSTV*HPFSFW
Trigger: CCAAAAGCTGAACGGATGCCACACTGTGCTGGGGCC...GAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CCTCGGGATCACAGCCCAGTCCCAGTCCCAGTCCCAGTGTGGGTGTACGGCCGGGAGAGCTGCCTGGCATaGCCCCACTGGAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: PRDHSPVPVPVPVWVYGRESCLA*PHWNVG
Trigger: CCCCACATTCCAGTGGGGCCATGCCAGGCAGCTCTC...CCGGCCGTACACCCACACTGGGACTGGGACTGGGACTGGGCTGTGATCCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAAGCTGGCTGCGGGTGGTaGCCGGTGGGGCTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: GGEHRGSWTGRWGTRREKAGCGW*PVGLLG
Trigger: CCCTAACAGCCCCACCGGCCACCACCCGCAGCCAGC...TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CCA 90 bp TACCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGCCCGCTTGGCGGCCCTaGCGCTGTTGGGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: YHQPWPLGQPSPRALSVEPAWRP*RCWGLW
Trigger: CCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGG...CTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp CAGAGCCAAACGCATCTTCCGCCACGCCTCATCCTCATCCGGCGCCGCATCCGACCAAGAGCCTCTCCCTaGCAGGCCTTGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QSQTHLPPRLILIRRRIRPRASP*QALAPG
Trigger: GCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGG...TCGGATGCGGCGCCGGATGAGGATGAGGCGTGGCGGAAGATGCGTTTGGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTCTCATTTCTGCCCATaGTGGGGCTGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QPWPLGQPSPRALSVEAASHFCP*WGWLAW
Trigger: CCAGGCGAGCCAGCCCCACCATGGGCAGAAATGAGA...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGTTGGCTCCTCGGAGCTaGGGTAGCCCGGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGLAPRS*GSPAWV
Trigger: CACCCAAGCCGGGCTACCCCAGCTCCGAGGAGCCAA...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GTTGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGTTGGCTCCTCGGAGCTaGGGTAGCCCGGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: VDPIQFPVGPLQEPLPGRLAPRS*GSPAWV
Trigger: CACCCAAGCCGGGCTACCCCAGCTCCGAGGAGCCAA...CCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GGCACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGTTGGGGCCAGCGACCTaGCCCTTGGCACTGGGAACC +
Preference number: 4 (lower is better)
Translates to: GTVLSLLTSPFSGTIPGGLGPAT*PLALGT
Trigger: GGTTCCCAGTGCCAAGGGCCAGGTCGCTGGCCCCAA...CCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp ACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGGCTTGGGGCCAGCGACCTaGCCCTTGGCACTGGGAACC +
Preference number: 4 (lower is better)
Translates to: TVLSLLTSPFSGTIPGGGLGPAT*PLALGT
Trigger: GGTTCCCAGTGCCAAGGGCCAGGTCGCTGGCCCCAA...GCCCCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CTCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTCCCTGCCTGGCTGCTTaGGGCCAGCGACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LTSVHGGWGPLISAHGGAPCLAA*GQRPGP
Trigger: AGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGG...AGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp CCAGGAAGCGGCTCTGCTGAGGTCAAGGGGCCCCAGCACAGTGTGGCATCCGTTAGGAAGCGGCTCTGCTaGGGTCAAGGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGSGSAEVKGPQHSVASVRKRLC*GQGAPA
Trigger: TGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCT...AACGGATGCCACACTGTGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAAGTGCTAGGGAGTGGCTaGGAGCTCGGGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGEHRGSWTGRWGTRREKVLGSG*ELGGGR
Trigger: CCTCCCACCCCCGAGCTCTCAGCCACTCCCTAGCAC...TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp ATGTGCCGACAGGAACGAGCTAGGATCCCAGTCTCCCGAGTTCCCAGGGCAGGACCGCTCGCTCCTACCTaGGGGCCGGGCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: MCRQERARIPVSRVPRAGPLAPT*GPGTRL
Trigger: CAACCTGGTGCCCGGCCCGCAGGTAGGAGCGAGCGG...TCCTGCCCTGGGAACTCGGGAGACTGGGATCCTAGCTCGTTCCTGTCGGCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp AGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGGACCCGGGGGAAGGCTaGTACCCCAGCCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFWLVQDGGEHRGSWTGRDPGEG*YPSRGR
Trigger: CCTGCCGCGGCTGGGGTAGCAGCCTTCCCCCGGGTC...CCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CCTCGGGATCACAGCCCAGTCCCAGTCCCAGTCCCAGTGTGGGTGTACGGCCGGGCAGAGGGAAGAGGCTaGAGTCGTCCAGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PRDHSPVPVPVPVWVYGRAEGRG*SRPVPE
Trigger: CTCTGGGACTGGACGACTGCAGCCTCTTCCCTCTGC...CCGGCCGTACACCCACACTGGGACTGGGACTGGGACTGGGCTGTGATCCCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CCAGCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCCGCGGCTGCAGGCGCTaGAGGGGACGGAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PAQCGIRSAFGWSRMVGSRGCRR*RGRSGA
Trigger: GGCTCCACTCCGTCCCCTGCAGCGCCTGCAGCCGCG...GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CTGAGGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCGCCCGAGAGCTTATGTaGCGACAGGAACGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: LRAAQTPAPEAVPWPRLAARELM*RQERAR
Trigger: CCTAGCTCGTTCCTGTCGGCACATAAGCTCTCGGGC...GGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp TCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGTCCTGGCGCCGTCTGTaGTCACGGCCTGTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SPLSMVGGGLSFLPMVGLSWRRL*SRPVPR
Trigger: CCGAGGGACAGGCCGTGAGCACAGACGGCGCCAGGA...CAGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GTTGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGGGGGCCTCTCATTTCTaGCCATGGTGGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VDPIQFPVGPLQEPLPGRGASHF*PWWGWL
Trigger: GAGCCAGCCCCACCATGGGCAGAAATGAGAGGCCCC...CCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GCGGAGCTTCTCCCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGGGGGGCCTCTCATTTCTaGCCATGGTGGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AELLPDLGIVPTRRGSGWGASHF*PWWGWL
Trigger: GAGCCAGCCCCACCATGGGCAGAAATGAGAGGCCCC...CCACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGGGAGAAGCTCCGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp AGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGAAGCTGCCTTGGCCTCGCCTaGCCAGTTTCGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RPAQSTGSECGGCVAPGSCLGLA*PVSPGA
Trigger: AGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCA...GCTTCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGCATGCCCTCTGATCTGAGCCTCCTTCCTGGCGCCGTCTGTGCTCACGGCCTGCTGCGGCCCTTGCCCTaGGGCAAGCTCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SMPSDLSLLPGAVCAHGLLRPLP*GKLCGL
Trigger: AAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAG...CAGGCCGTGAGCACAGACGGCGCCAGGAAGGAGGCTCAGATCAGAGGGCATGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp AGGTTGGGCACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGTCTGCCTCGCAGGGCTaGGGCAGCTGGCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLGTVLSLLTSPFSGTIPSASQG*GSWQAR
Trigger: CCTGGCTTGCCAGCTGCCCCAGCCCTGCGAGGCAGA...CGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGGCTCCTCTTTCCGCCTaGTCAGCCTCGAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: VQDGGEHRGSWTGRWGTRAPLSA*SASSGA
Trigger: AGCTCCGCTCGAGGCTGACCAGGCGGAAAGAGGAGC...CCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp GGCACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGCTCCTCTTTCCGCCTaGTCAGCCTCGAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: GTVLSLLTSPFSGTIPGGAPLSA*SASSGA
Trigger: AGCTCCGCTCGAGGCTGACCAGGCGGAAAGAGGAGC...CCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GGCGCCGTCTGTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACGTTGGTCCAGGATGGTaGGGAGCACAGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GAVCAHGLSLGWLSHLGDVGPGW*GAQRVL
Trigger: CAAGACCCTCTGTGCTCCCCACCATCCTGGACCAAC...GTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCACAGACGGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTTGGTTGGTCCAGGATaGTGGGGAGCACAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QPWPLGQPSPRALSVEAALVGPG*WGAQRV
Trigger: GACCCTCTGTGCTCCCCACCATCCTGGACCAACCAA...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTTGGCACAGTACCATCAGCCCTaGCCCTTAGGCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GSSRTLPGCLGPATWPLAQYHQP*PLGQPS
Trigger: ACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTACTG...TGCCAAGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCTGCAGGAGCCTGCATCTCAAGGTCGGGGTaGGCTGCCTTGCGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LILIRRRIRPSKTPAGACISRSG*AALRSR
Trigger: CCTGCTCCGCAAGGCAGCCCACCCCGACCTTGAGAT...GCAGGCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp CCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCTCTTTCGGCAACTCTaGCAGACCCACAGAGGCATC +
Preference number: 4 (lower is better)
Translates to: PGRATPRASPWQALAPGFLFRQL*QTHRGI
Trigger: GATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAG...GAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCCCCAAGAGAGCTGCCTaGCATGGCCCCACTGGAATG +
Preference number: 4 (lower is better)
Translates to: PSALALRPAQSTGSECGGPKRAA*HGPTGM
Trigger: CATTCCAGTGGGGCCATGCCAGGCAGCTCTCTTGGG...GCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp ACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGGCTCTGAGCCTCCTTCCTaGCGCCGTCTGTGCTCACGG +
Preference number: 4 (lower is better)
Translates to: TVLSLLTSPFSGTIPGGGSEPPS*RRLCSR
Trigger: CCGTGAGCACAGACGGCGCCAGGAAGGAGGCTCAGA...GCCCCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GTTGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCATTTCTGCCCATGGTaGGGCTGGCTCGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VDPIQFPVGPLQEPLPGRHFCPW*GWLAWS
Trigger: GCTCCAGGCGAGCCAGCCCCACCATGGGCAGAAATG...CCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGCCTGGCCCTTGGCACTaGGAACCTCTAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGPGPWH*EPLGWL
Trigger: CAGCCAGCCTAGAGGTTCCCAGTGCCAAGGGCCAGG...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp ACGCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCTGCAGGAGCCAGCGACCTGGCCCTTaGCACTGGGAACCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: TPHPHPAPHPTLQDSCRSQRPGP*HWEPLG
Trigger: GCCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTG...GCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CAA 72 bp CGGGCCCGCTTGGCGGCCCTGGCGCTGTTGGGGACTTaGGGCTCCGTGCTGTTGATGAATTCCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RARLAALALLGT*GSVLLMNSSSS
Trigger: TGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp TGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACACTCCTGATCTCAGGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: WSRMVGSTEGLGRVGGAHTPDLR*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACCTGAGATCAGGAGT...GTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513282.5
CDS-3UTR TCA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGCTGGTCTTGAACTCCTaGTCTCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: QPWPLGQPSPRALSVEAALVLNS*SQVIHP
Trigger: CGGGTGGATCACCTGAGATCAGGAGTTCAAGACCAG...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513282.5
CDS-3UTR TCA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGTGGGCAGGGCCTCACTaGGCTGTGCTAGGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGWAGPH*AVLGVV
Trigger: AACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCA...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp CATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTAGCAACAGGGCACTCTaGAGCCTGGGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HQPWPLGQPSPRALSVEASNRAL*SLGRER
Trigger: CCTTTCCCTGCCCAGGCTTCAGAGTGCCCTGTTGCT...AGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR TCA 90 bp GCGGAGCTTCTCCCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGGGGTAGATGGGAGCTCTaGCATGGCCCTGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: AELLPDLGIVPTRRGSGWGRWEL*HGPGVW
Trigger: CCACACTCCAGGGCCATGTCAGAGCTCCCATCTACC...CCACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGGGAGAAGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp TACCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGTCGCTCTTCTTGGCCTaGCTGCCCTGCCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: YHQPWPLGQPSPRALSVESLFLA*LPCLLP
Trigger: GGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGAGCGA...CTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTTGATGAATTCCAGCGAGGCTGGCTTCTCCTaGTTGTTGCGGCTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: AALALLGTLGSVLLMNSSEAGFS*LLRLRR
Trigger: CCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTC...GCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp ACGCATCTTCCGCCACGCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGTCTGAGTGTGGAGGCTaGGTAGCACCAGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: THLPPRLILIRRRIRPSKSECGG*VAPGSG
Trigger: GCCGCTTCCTGGTGCTACGCAGCCTCCACACTCAGA...CTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGCGTGGCGGAAGATGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGTCTGAGTGTGGAGGCTaGGTAGCACCAGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGSECGG*VAPGSG
Trigger: GCCGCTTCCTGGTGCTACGCAGCCTCCACACTCAGA...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp CTCCTGCAGGAGCCTGCCTTCCTGGGCAGGCTCAGCCAAAAGACCAACTCAAAACACCGCCGCTCGGCCTaGTCCGCCTCCGCGTCATGC +
Preference number: 4 (lower is better)
Translates to: LLQEPAFLGRLSQKTNSKHRRSA*SASASC
Trigger: GCATGACGCGGAGGCGGAGCAGGCCGAGCGGCGGTG...TTTTGAGTTGGTCTTTTGGCTGAGCCTGCCCAGGAAGGCAGGCTCCTGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGCACCGCCGCTCGGCCTaGTCCGCCTCCGCGTCATGC +
Preference number: 4 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQHRRSA*SASASC
Trigger: GCATGACGCGGAGGCGGAGCAGGCCGAGCGGCGGTG...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR GCA 90 bp GTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGACCCTCCAAGACTCCTaGAGGAGCCTGCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VQDGGEHRGSWTGRWGTRTLQDS*RSLPSW
Trigger: CCAGGAAGGCAGGCTCCTGCAGGAGTCTTGGAGGGT...CCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTTCCCCTGCTGCCCGATaGAGTGTCTGCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LLRPCLGLAWPVSPGAALSPAAR*SVCRAK
Trigger: TTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGA...AAGGGCAGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp GTTGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGGGCTGTCAAGAGCCATaGCTTCTGGCTGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: VDPIQFPVGPLQEPLPGRGCQEP*LLAAPA
Trigger: GGCTGGTGCAGCCAGAAGGCATGGCTCTTGACAGCC...CCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCCAAACTTGTGCCCCTTaGACCCGGGATCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PSALALRPAQSTGSECGGQTCAP*TRDPCE
Trigger: CTCACAGGGATCCCGGGTGCAAGGGGCACAAGTTTG...GCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CCAGGAAGCGGCTCTGCTGAGGTCAAGGGGCCCCAGCACAGTGTGGCATCCGTTGGGGCCTCTCATTTCTaGCCATGGTGGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGSGSAEVKGPQHSVASVGASHF*PWWGWL
Trigger: GAGCCAGCCCCACCATGGGCAGAAATGAGAGGCCCC...AACGGATGCCACACTGTGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACTGCCTTGGCCTCGCCTaGCCAGTTTCGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: WSRMVGSTEGLGRVGGAHCLGLA*PVSPGA
Trigger: AGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCA...GTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGCCTCCCAGAGTCCCCTGCTGCCCGATGCAGTGTCTGCAGAGCCAAACGCATCCAGGGCTGGGGCAGCTaGCAAGCCAGGCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: SLPESPAARCSVCRAKRIQGWGS*QARPLC
Trigger: ACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTG...GATGCGTTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCATCATCCACATCTCGGTaGTCCACGGCGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GWSRMVGSTEGLGRVGGASSTSR*STAGSP
Trigger: TGGGGAGCCCGCCGTGGACCACCGAGATGTGGATGA...TGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: QPWPLGQPSPRALSVEAASWTGR*GTRREK
Trigger: TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CACCCAGCCCCGAGTGCCACAACCCTCCCAGAGCAACCGTGGCCCATGTCACCCGGCCCCAGCACAGTGTaGCATCCGTTCAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: HPAPSATTLPEQPWPMSPGPSTV*HPFSFW
Trigger: CCAAAAGCTGAACGGATGCCACACTGTGCTGGGGCC...GGGTGACATGGGCCACGGTTGCTCTGGGAGGGTTGTGGCACTCGGGGCTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp TGCAGAGCCAAACGCATCTTCCGCCACGCCTCATCCTCATCCGGCGCCGCATCCCTGCTCTGCTGGGTATaGCGAGGAGGCGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: CRAKRIFRHASSSSGAASLLCWV*RGGARR
Trigger: TCTCCTGGCGCCTCCTCGCCATACCCAGCAGAGCAG...GGATGCGGCGCCGGATGAGGATGAGGCGTGGCGGAAGATGCGTTTGGCTCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp ATCTTCCGCCACGCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCATCTCAAGGTCGGGGTaGGCTGCCTTGCGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: IFRHASSSSGAASDPPRLISRSG*AALRSR
Trigger: CCTGCTCCGCAAGGCAGCCCACCCCGACCTTGAGAT...GAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGCGTGGCGGAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp TCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAACCCAAGAGAGCTGCCTaGCATGGCCCCACTGGAATG +
Preference number: 4 (lower is better)
Translates to: SGHSKSLSLAGLGSRLPEPKRAA*HGPTGM
Trigger: CATTCCAGTGGGGCCATGCCAGGCAGCTCTCTTGGG...TTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGTCAGGAGCGGCATGCTaGTGGAGGGTAGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGSGAAC*WRVDGS
Trigger: GCTCCCATCTACCCTCCACCAGCATGCCGCTCCTGA...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CCA 90 bp AGCGGAGCTTCTCCCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGCCTGGCCCTTGGCACTaGGAACCTCTAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGASPGSRYSSDSSGQRVPGPWH*EPLGWL
Trigger: CAGCCAGCCTAGAGGTTCCCAGTGCCAAGGGCCAGG...CACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGGGAGAAGCTCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGACCTGGCCCTTGGCACTaGGAACCTCTAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGPGPWH*EPLGWL
Trigger: CAGCCAGCCTAGAGGTTCCCAGTGCCAAGGGCCAGG...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGCGGAGCTTCTCCCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGCAGCGACCTGGCCCTTaGCACTGGGAACCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: SGASPGSRYSSDSSGQRVQRPGP*HWEPLG
Trigger: GCCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTG...CACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGGGAGAAGCTCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp TACCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGCAGCGACCTGGCCCTTaGCACTGGGAACCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: YHQPWPLGQPSPRALSVEQRPGP*HWEPLG
Trigger: GCCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTG...CTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
3UTR CAA 72 bp GGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTaGGCTCCCGGCTTCCAGAAACACGATTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GRATPRASPWQA*APGFQKHDLPA
Trigger: AGCAGGCAAATCGTGTTTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp TACCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGTGGGCAGGGCCTCACTaGGCTGTGCTAGGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: YHQPWPLGQPSPRALSVEWAGPH*AVLGVV
Trigger: AACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCA...CTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp CTCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGGGAGCAGTGAGGTCTaGGTGCTGGTGGTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: LTSVHGGWGPLISAHGGAGSSEV*VLVVLR
Trigger: TCGGAGCACCACCAGCACTCAGACCTCACTGCTCCC...AGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp CTTTGGGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTGCAGCGGGTGGCTTATaGGACTTCTGCACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LWEALGPCLAAWGQRPGPAAGGL*DFCTAS
Trigger: GGAAGCAGTGCAGAAGTCTCATAAGCCACCCGCTGC...AGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCCCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GTTGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGTGCTCAGGAAGCTGTTaGCCCGATCCAGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: VDPIQFPVGPLQEPLPGRCSGSC*PDPVPG
Trigger: ACCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCA...CCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp CAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGGGACAGGTCAAGGTTaGTGTCAGGCTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QDGGEHRGSWTGRWGTRRGTGQG*CQAAAL
Trigger: CAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCC...CCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGGGGACAGGTCAAGGTTaGTGTCAGGCTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGGTGQG*CQAAAL
Trigger: CAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCC...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GGGGAAAGCCTCACCGGGGATGGTAGGAGGACTCCCAAGAGAGCTGCCTGGCATGGTTGGGCACGGTGTTaGGTCTCCTCACGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GESLTGDGRRTPKRAAWHGWARC*VSSRAR
Trigger: ACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACC...ATGCCAGGCAGCTCTCTTGGGAGTCCTCCTACCATCCCCGGTGAGGCTTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGGGCGGCTGCGGCCCTTaGCCTGGGGCAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQGGCGP*PGASSV
Trigger: CACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCC...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGCGGCTGCGGCCCTTaGCCTGGGGCAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VGHTEGKIIRLQLAVRASGGCGP*PGASSV
Trigger: CACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCC...TGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCGGATCCCGCCCAGGGTaGCCCCCTTCATGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGAHGGKNYTPSAGSQGLGSRPG*PPSWAA
Trigger: AGCTGCCCATGAAGGGGGGCACCCTGGGCGGGATCC...GAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR GCA 90 bp CTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCTGCAGGAGCCTGCGCTGTCTGCTCCAACTaGTCTGCTGGGTATGGCGAG +
Preference number: 4 (lower is better)
Translates to: LILIRRRIRPSKTPAGACAVCSN*SAGYGE
Trigger: CTCGCCATACCCAGCAGAGCAGTTGGAGCAGACAGC...GCAGGCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp TTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGGCGCTGCAGGGGTGGCTaGACCCCGAGAATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LISCRRLLRKLLTRSSSRRCRGG*TPRMVG
Trigger: CCCCACCATTCTCGGGGTGCAGCCACCCCTGCAGCG...CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGCAGTGCCCACCACAGTaGCCGCTGCAGGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VQLLVGPGWWGAQRVLDGQCPPQ*PLQGWL
Trigger: CAGCCACCCCTGCAGCGGGCACTGTGGTGGGCACTG...CCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp AGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGAAGCCTGTGTGCAAACTTGTaGCCCTTGCACCCGGGATCC +
Preference number: 4 (lower is better)
Translates to: RPAQSTGSECGGCVAPGSLCANL*PLHPGS
Trigger: GGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAG...GCTTCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGGGCTCAGGCAGCTCCTaGTTGCAACTGGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGGSGSS*LQLGTS
Trigger: GGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGAGCC...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TCGCAGGGCTGGGGCAGCTGGCAAGCCAGGCCACTGTGTGCAAACTTGTGCCCCCCCCGTCCATGTCCTTaGGCAGGAACACATCGTCCA +
Preference number: 4 (lower is better)
Translates to: SQGWGSWQARPLCANLCPPRPCP*AGTHRP
Trigger: TGGACGATGTGTTCCTGCCCAAGGACATGGACGGGG...GGGGCACAAGTTTGCACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTGCGA
63% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGCATCTCTCTGGTGGGTaGAGGATGAGGTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VQDGGEHRGSWTGRWGTRHLSGG*RMRCRS
Trigger: GCTCCTGCACCTCATCCTCCACCCACCAGAGAGATG...CCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGCATCTCTCTGGTGGGTaGAGGATGAGGTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QDGGEHRGSWTGRWGTRRHLSGG*RMRCRS
Trigger: GCTCCTGCACCTCATCCTCCACCCACCAGAGAGATG...CCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGTTGGTCCAGGATGGTaGGGAGCACAGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: HQPWPLGQPSPRALSVEAVGPGW*GAQRVL
Trigger: CAAGACCCTCTGTGCTCCCCACCATCCTGGACCAAC...AGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CTCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTCTGCTCTGCTGGGTATaGCGAGGAGGCGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LTSVHGGWGPLISAHGGALLCWV*RGGARR
Trigger: TCTCCTGGCGCCTCCTCGCCATACCCAGCAGAGCAG...AGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp AGCCTCCCAGAGTCCCCTGCTGCCCGATGCAGTGTCTGCAGAGCCAAACGCATCCTCCAACTGCTCTGCTaGGTATGGCGAGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: SLPESPAARCSVCRAKRILQLLC*VWRGGA
Trigger: GGCGCCTCCTCGCCATACCCAGCAGAGCAGTTGGAG...GATGCGTTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp GTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGCCCGCTTGGCGGCCCTaGCGCTGTTGGGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: VWHPFSFWLVQDGGEHRGPAWRP*RCWGLW
Trigger: CCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGG...CCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp GGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCCCAAGAGCCTCTCCCTaGCAGGCCTTGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GGAHGGKNYTPSAGSQGLPRASP*QALAPG
Trigger: GCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGG...GAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAATCTGTCCATGGTGGGTaGGGGCCTCTCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SGHSKSLSLAGLGSRLPESVHGG*GPLISA
Trigger: GGCAGAAATGAGAGGCCCCCACCCACCATGGACAGA...TTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCGCTCCTGCTTGCAACTaGGAACTTCCTTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PGRATPRASPWQALAPGFAPACN*ELPLSL
Trigger: CAAGCTCAAAGGAAGTTCCCAGTTGCAAGCAGGAGC...GAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCCCTGCCTGGCTGCTTaGGGCCAGCGACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSPCLAA*GQRPGP
Trigger: AGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGG...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGCCCTGCCTGGCTGCTTaGGGCCAGCGACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRPCLAA*GQRPGP
Trigger: AGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGG...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTGGCCTTGCTGGGCCTaGGGGCTGCACAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: VWHPFSFWLVQDGGEHRGWPCWA*GLHRLL
Trigger: CAGGAGTCTGTGCAGCCCTCAGGCCCAGCAAGGCCA...CCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTGGCCTTGCTGGGCCTaGGGGCTGCACAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: VQLLVGPGWWGAQRVLDGWPCWA*GLHRLL
Trigger: CAGGAGTCTGTGCAGCCCTCAGGCCCAGCAAGGCCA...CCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GTTGCGGCTCCGGCGGCTGCGGCCCTTGCCCTGGGGCAAGCTCTGTGGCCTTGCTTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VAAPAAAALALGQALWPCFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...GCAAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCGGAGCCGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp AGGTTGGGCACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGTGGGCAGGGCCTCACTaGGCTGTGCTAGGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: RLGTVLSLLTSPFSGTIPWAGPH*AVLGVV
Trigger: AACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCA...CGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp TTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGGAGGAAGCGGCTCTGCTaGGGTCAAGGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LISCRRLLRKLLTRSSSRRKRLC*GQGAPA
Trigger: TGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCT...CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp CATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTCCAAAGGAGCTGGGGTaGGACGGGATTAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: HQPWPLGQPSPRALSVEAPKELG*DGIRDA
Trigger: AGCATCTCTAATCCCGTCTCACCCCAGCTCCTTTGG...AGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR TCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGCATGCCCTCTGATCTaGGCCTCCTTCCTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRACPLI*ASFLAP
Trigger: CGGCGCCAGGAAGGAGGCTCAGATCAGAGGGCATGC...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp AGGTTGGGCACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGCCGGCTTGGGTGTCTTaGCCCAGATCACCCGGGATA +
Preference number: 4 (lower is better)
Translates to: RLGTVLSLLTSPFSGTIPPAWVS*PRSPGI
Trigger: TATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGG...CGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACACTGCTCCTGAGGCCGTaGCTTGGCCTCGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTLLLRP*LGLAWP
Trigger: TGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAG...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACTGCTCCTGAGGCCGTaGCTTGGCCTCGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGLLLRP*LGLAWP
Trigger: TGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAG...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTGGCGGCTGCGGCCCTTaGCCTGGGGCAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GRASLSCARSGFLEAEVGGGCGP*PGASSV
Trigger: CACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCC...ACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp AGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGGGCGGCTGCGGCCCTTaGCCTGGGGCAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: STEGLGRVGGAHGGKNYTGGCGP*PGASSV
Trigger: CACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCC...CGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTGCTTCTCCTGCTTGTTaGGGCTCCGGCGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSASPAC*GSGGCG
Trigger: GCCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGC...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTACCCAGCCCCTCATCTaGCTCGCAGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPTQPLI*LAGLGQ
Trigger: CTGCCCCAGCCCTGCGAGGCAGATGAGGGGCTGGGT...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGGATCCCGCCCAGGGTaGCCCCCTTCATGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRGSRPG*PPSWAA
Trigger: AGCTGCCCATGAAGGGGGGCACCCTGGGCGGGATCC...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR GCA 90 bp AGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGGTGGGCTGCCTTGCGGAGGGCAGCCTGGCTGTCTaGTCCAACTGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRILQTWDLKVGVGCLAEGSLAV*SNCSAG
Trigger: CCCAGCAGAGCAGTTGGAGCAGACAGCCAGGCTGCC...CTCCGCAAGGCAGCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp CTTCCTCCATGCTCTTTCGGCAACTCTGGCAGACCCACAGAGGCATCTCGCCTAAAGGTCGGGGTGGGCTaGCTTGCGGAGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPPCSFGNSGRPTEASRLKVGVG*LAEQGR
Trigger: CCTCCCCTGCTCCGCAAGGCAGCCCACCCCGACCTT...TAGGCGAGATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAGCATGGAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp ACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTCACCACAGTGCCCGCTaGAGGGGTGGCTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: TKHKESSVGPAVPSALALHHSAR*RGGCTP
Trigger: CGGGGTGCAGCCACCCCTGCAGCGGGCACTGTGGTG...AAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp TGCAGAGCCAAACGCATCTTCCGCCACGCCTCATCCTCATCCGGCGCCGCATCCCTGTGTGCAAACTTGTaGCCCTTGCACCCGGGATCC +
Preference number: 4 (lower is better)
Translates to: CRAKRIFRHASSSSGAASLCANL*PLHPGS
Trigger: GGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAG...GGATGCGGCGCCGGATGAGGATGAGGCGTGGCGGAAGATGCGTTTGGCTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp AGCGGAGCTTCTCCCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGCTGTGTGCAAACTTGTaGCCCTTGCACCCGGGATCC +
Preference number: 4 (lower is better)
Translates to: SGASPGSRYSSDSSGQRVLCANL*PLHPGS
Trigger: GGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAG...CACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGGGAGAAGCTCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTTCCTGGCGCCGTCTGTaGTCACGGCCTGTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPSWRRL*SRPVPR
Trigger: CCGAGGGACAGGCCGTGAGCACAGACGGCGCCAGGA...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp TGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTCCTGGCGCCGTCTGTaGTCACGGCCTGTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: WHPFSFWLVQDGGEHRGSSWRRL*SRPVPR
Trigger: CCGAGGGACAGGCCGTGAGCACAGACGGCGCCAGGA...AGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTTGATGAATTCCAGCTTCTTTTTCAGCTTGTaGCGGGCCCGCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AALALLGTLGSVLLMNSSFFFSL*RARLAA
Trigger: GGCCGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAA...GCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp TACCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGGCTCAGGCAGCTCCTaGTTGCAACTGGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: YHQPWPLGQPSPRALSVEGSGSS*LQLGTS
Trigger: GGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGAGCC...CTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGGTGGGCTGCCTTGCGGAGGAAGCTCTAGGACCCTaGCTGGCTGCTTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRILQTWDLKVGVGCLAEEALGP*LAAWGQ
Trigger: CTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTC...CTCCGCAAGGCAGCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAGGCCACTGCGGCCCTTGCCCTaGGGCAAGCTCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HKESSVGPAVPSALALRPLRPLP*GKLCGL
Trigger: AAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAG...TGGCCTAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGCGGAGCTTCTCCCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGCCCCGTCCATGTCCTTaGGCAGGAACACATCGTCCA +
Preference number: 4 (lower is better)
Translates to: SGASPGSRYSSDSSGQRVPRPCP*AGTHRP
Trigger: TGGACGATGTGTTCCTGCCCAAGGACATGGACGGGG...CACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGGGAGAAGCTCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGCGTTCAGCTTTTGGTTaGTCCAGGATGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VQDGGEHRGSWTGRWGTRRSAFG*SRMVGS
Trigger: GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG...CCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CCAGGAAGCGGCTCTGCTGAGGTCAAGGGGCCCCAGCACAGTGTGGCATCCGTTGGCCCCAGCACAGTGTaGCATCCGTTCAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PGSGSAEVKGPQHSVASVGPSTV*HPFSFW
Trigger: CCAAAAGCTGAACGGATGCCACACTGTGCTGGGGCC...AACGGATGCCACACTGTGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GCCTCCCAGAGTCCCCTGCTGCCCGATGCAGTGTCTGCAGAGCCAAACGCATCTCAGTACCATCAGCCCTaGCCCTTAGGCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ASQSPLLPDAVSAEPNASQYHQP*PLGQPS
Trigger: ACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTACTG...AGATGCGTTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGTTCGTCATCCTCCCTaGGGCCGTCGTGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGVRHPP*GRRGRA
Trigger: AGCCCGACCACGACGGCCCCAGGGAGGATGACGAAC...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CCTCGGGATCACAGCCCAGTCCCAGTCCCAGTCCCAGTGTGGGTGTACGGCCGGAGGATTCTCCAAACCTaGGATCTCAAGGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PRDHSPVPVPVPVWVYGRRILQT*DLKVGV
Trigger: CACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCT...CCGGCCGTACACCCACACTGGGACTGGGACTGGGACTGGGCTGTGATCCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGGTGGGCCTCCCAGAGCAACCGTaGCCCATGTCACCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LFALSRILQTWDLKVGVGLPEQP*PMSPPP
Trigger: AGGCGGGGGTGACATGGGCCACGGTTGCTCTGGGAG...GCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp TGCAGAGCCAAACGCATCTTCCGCCACGCCTCATCCTCATCCGGCGCCGCATCCAAGAGCCATGCCTTCTaGCTGCACCAGCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CRAKRIFRHASSSSGAASKSHAF*LHQPPR
Trigger: TCTGGGAGGCTGGTGCAGCCAGAAGGCATGGCTCTT...GGATGCGGCGCCGGATGAGGATGAGGCGTGGCGGAAGATGCGTTTGGCTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp CCCGATGCAGTGTCTGCAGAGCCAAACGCATCTTCCGCCACGCCTCATCCTCATAAGGTGCTGCCGGGGTaGTGGGCAGCAGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: PDAVSAEPNASSATPHPHKVLPG*WAAGVG
Trigger: ACCCACACCTGCTGCCCACCACCCCGGCAGCACCTT...ATGAGGATGAGGCGTGGCGGAAGATGCGTTTGGCTCTGCAGACACTGCATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGGCCTGTCCCTCGGCTaGCTGTCACACTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRGLSLG*LSHLGD
Trigger: GTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCC...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGCGGCCCTGGCGCTGTTaGGGACTTTGGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRRPWRC*GLWAPC
Trigger: GCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCG...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCGGCCCTGGCGCTGTTaGGGACTTTGGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSRPWRC*GLWAPC
Trigger: GCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCG...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTTTGGCTCCTCGGAGCTaGGGTAGCCCGGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGLAPRS*GSPAWV
Trigger: CACCCAAGCCGGGCTACCCCAGCTCCGAGGAGCCAA...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCACCCTGCCTGGCTGCTTaGGGCCAGCGACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSPCLAA*GQRPGP
Trigger: AGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGG...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
3UTR CAA 72 bp GCAGCTCCTGCTTGCAACTGGGAACTTCCTTTGAGCTaGGCTCCTCGGAGCTGGGGTAGCCCGGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: AAPACNWELPLS*APRSWGSPAWV
Trigger: CACCCAAGCCGGGCTACCCCAGCTCCGAGGAGCCAAGCTCAAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 72 bp CAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTaGGGACTGCCAGCCCAACCTGGTCCTGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: QFRQELPFSFSV*GLPAQPGPGRL
Trigger: GAGCCGGCCAGGACCAGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp TTTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGTGGCCTTGCTGGGCCTaGGGGCTGCACAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: FDLLQTAAQEAVDPIQFPWPCWA*GLHRLL
Trigger: CAGGAGTCTGTGCAGCCCTCAGGCCCAGCAAGGCCA...CGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACATGGCCTTGCTGGGCCTaGGGGCTGCACAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTWPCWA*GLHRLL
Trigger: CAGGAGTCTGTGCAGCCCTCAGGCCCAGCAAGGCCA...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAAGGAAGCGGCTCTGCTaGGGTCAAGGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTRKRLC*GQGAPA
Trigger: TGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCT...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTAGGAAGCGGCTCTGCTaGGGTCAAGGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPRKRLC*GQGAPA
Trigger: TGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCT...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGAGCATGCCCTCTGATCTaGGCCTCCTTCCTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGACPLI*ASFLAP
Trigger: CGGCGCCAGGAAGGAGGCTCAGATCAGAGGGCATGC...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGATCTCAGTTTTGGGACTaGCAGCCCAACCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGSQFWD*QPNLVL
Trigger: CAGGACCAGGTTGGGCTGGCAGTCCCAAAACTGAGA...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCTGCTCCTGAGGCCGTaGCTTGGCCTCGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: STEGLGRVGGAHGGKNYTLLLRP*LGLAWP
Trigger: TGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAG...CGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp ACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGACTGCTCCTGAGGCCGTaGCTTGGCCTCGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TVWHPFSFWLVQDGGEHRLLLRP*LGLAWP
Trigger: TGGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAG...TCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGGCTTCTCCTGCTTGTTaGGGCTCCGGCGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWASPAC*GSGGCG
Trigger: GCCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGC...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGGAGGCTGGCTTCTCCTaGTTGTTGCGGCTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQEAGFS*LLRLRR
Trigger: CCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTC...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGAAGCAGCTTCGCTCAGAGCTaGTATCCTCTTCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: RPAQSTGSECGGCVAPGSSFAQS*YPLPHP
Trigger: TGGGTGAGGAAGAGGATAGCAGCTCTGAGCGAAGCT...GCTTCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp ACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTGGATCCCGCCCAGGGTaGCCCCCTTCATGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TKHKESSVGPAVPSALALGSRPG*PPSWAA
Trigger: AGCTGCCCATGAAGGGGGGCACCCTGGGCGGGATCC...AAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR GCA 90 bp ACGCATCTTCCGCCACGCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGAAGAAGGGCAGGTTCTaGTGGGTTTCCACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: THLPPRLILIRRRIRPSKKKGRF*WVSTSV
Trigger: CACTGAGGTGGAAACCCAGCAGAACCTGCCCTTCTT...CTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGCGTGGCGGAAGATGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp CTTATGTGCCGACAGGAACGAGCTAGGATCCCAGTCTCCCGAGTTCCCAGGGCACCCAGAGTCCCCTGCTaGCCGATGCAGTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LMCRQERARIPVSRVPRAPRVPC*PMQCLQ
Trigger: CTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGG...TGCCCTGGGAACTCGGGAGACTGGGATCCTAGCTCGTTCCTGTCGGCACATAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CTGAGGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCTGTTCTCGACCTGTCTaGCTTTCATCTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LRAAQTPAPEAVPWPRLACSRPV*LSSSSM
Trigger: CATGGAGGAAGATGAAAGGCAGACAGGTCGAGAACA...GGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAAGAGGCCCACTGCAGTaGCCACCACAGTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTRGPLQ*PPQCPL
Trigger: CAGCGGGCACTGTGGTGGGCACTGCAGTGGGCCTCT...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp AGGTTGGGCACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGCTCAGGCAGCTCCTaGTTGCAACTGGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: RLGTVLSLLTSPFSGTIPGSGSS*LQLGTS
Trigger: GGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGAGCC...CGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp TTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGGGAAGCTCTAGGACCCTaGCTGGCTGCTTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LISCRRLLRKLLTRSSSREALGP*LAAWGQ
Trigger: CTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTC...CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGGAAGCTCTAGGACCCTaGCTGGCTGCTTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VQLLVGPGWWGAQRVLDGEALGP*LAAWGQ
Trigger: CTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTC...CCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TCGCAGGGCTGGGGCAGCTGGCAAGCCAGGCCACTGTGTGCAAACTTGTGCCCCCAGCCTCAGCACAGCTaGCTACTTTGGGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: SQGWGSWQARPLCANLCPQPQHS*LLWEAL
Trigger: TAGAGCTTCCCAAAGTAGGCAGCTGTGCTGAGGCTG...GGGGCACAAGTTTGCACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGCAGCCTCAGCACAGCTaGCTACTTTGGGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: QDGGEHRGSWTGRWGTRRQPQHS*LLWEAL
Trigger: TAGAGCTTCCCAAAGTAGGCAGCTGTGCTGAGGCTG...CCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CTTTGGGAAGCTCTAGGACCCTGCCTGGCTGCTTGGGGCCAGCGACCTGGCCCTTCTCCTTCTCAGTTTTaGGACTGCCAGCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: LWEALGPCLAAWGQRPGPSPSQF*DCQPNL
Trigger: CAGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGA...AGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTCCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTGCCTTGGCCTCGCCTaGCCAGTTTCGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VQLLVGPGWWGAQRVLDGCLGLA*PVSPGA
Trigger: AGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCA...CCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGCCTGAGGCCGTGCCTTaGCCTCGCCTGGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QCGIRSAFGWSRMVGSTEPEAVP*PRLASF
Trigger: GAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGG...CTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCCCTGAGGCCGTGCCTTaGCCTCGCCTGGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSPEAVP*PRLASF
Trigger: GAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGG...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCACTGCGGCCCTTGCCCTaGGGCAAGCTCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VGHTEGKIIRLQLAVRASLRPLP*GKLCGL
Trigger: AAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAG...TGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGTCTGCCTCGCAGGGCTaGGGCAGCTGGCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLLFALSRILQTWDLKVGSASQG*GSWQAR
Trigger: CCTGGCTTGCCAGCTGCCCCAGCCCTGCGAGGCAGA...CCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCTCTGCCTCGCAGGGCTaGGGCAGCTGGCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFSASQG*GSWQAR
Trigger: CCTGGCTTGCCAGCTGCCCCAGCCCTGCGAGGCAGA...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp GTTGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGAACTTCCCATCTCTCTaGTGGGTGGAGGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: VDPIQFPVGPLQEPLPGRNFPSL*WVEDEV
Trigger: CACCTCATCCTCCACCCACCAGAGAGATGGGAAGTT...CCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp TGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACCGTTCAGCTTTTGGTTaGTCCAGGATGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: WSRMVGSTEGLGRVGGAHRSAFG*SRMVGS
Trigger: GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG...GTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGCACCCCGAGAATGGTaGGGGCATCTTCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGAPREW*GHLQER
Trigger: CCGCTCCTGAAGATGCCCCCACCATTCTCGGGGTGC...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGTGCCCGCTGCAGGGGTaGCTGCACCCCGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: QCGIRSAFGWSRMVGSTECPLQG*LHPENG
Trigger: ACCATTCTCGGGGTGCAGCCACCCCTGCAGCGGGCA...CTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp TCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGGTGAGTGCTAGGGAGTaGCTGAGAGCTCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SPGQFRQELPFSFSVLGLVSARE*LRARGW
Trigger: CCACCCCCGAGCTCTCAGCCACTCCCTAGCACTCAC...CAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGGCCAGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTACCAAGAGCCTCTCCCTaGCAGGCCTTGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLPRASP*QALAPG
Trigger: GCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGG...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTTGATGAATTCCAGCCACCTCTGTCCATGGTaGGTGGGGGCCTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: AALALLGTLGSVLLMNSSHLCPW*VGASHF
Trigger: GAAATGAGAGGCCCCCACCCACCATGGACAGAGGTG...GCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGCCTGGCCCTTGGCACTaGGAACCTCTAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VWHPFSFWLVQDGGEHRGPGPWH*EPLGWL
Trigger: CAGCCAGCCTAGAGGTTCCCAGTGCCAAGGGCCAGG...CCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
3UTR CAA 72 bp GGCTTGGGTGTCTTGACCCAGATCACCCGGGATAGGTaGGGCACGGTGTTGAGTCTCCTCACGAGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: GLGVLTQITRDR*GTVLSLLTSPF
Trigger: GAACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGACACCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 72 bp CGGTCAGTCTCATCCATCTCCACCCCGTCCATGTCCTaGGGCAGGAACACATCGTCCAAGGAGGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSVSSISTPSMS*GRNTSSKEEAG
Trigger: GCCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAAGGACATGGACGGGGTGGAGATGGATGAGACTGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp ACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTGGCCTTGCTGGGCCTaGGGGCTGCACAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: TEGLGRVGGAHGGKNYTPWPCWA*GLHRLL
Trigger: CAGGAGTCTGTGCAGCCCTCAGGCCCAGCAAGGCCA...AGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACCTGGTGGGTGGAGGATaGGGTGCAGGAGCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: GTRREKLYAFSWQSGPQDLVGGG*GAGASL
Trigger: GAGCGAAGCTCCTGCACCTCATCCTCCACCCACCAG...GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTCTGGTGGGTGGAGGATaGGGTGCAGGAGCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPLVGGG*GAGASL
Trigger: GAGCGAAGCTCCTGCACCTCATCCTCCACCCACCAG...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCCTGGTGGGTGGAGGATaGGGTGCAGGAGCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGLVGGG*GAGASL
Trigger: GAGCGAAGCTCCTGCACCTCATCCTCCACCCACCAG...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp CAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGCTGGTGGGTGGAGGATaGGGTGCAGGAGCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: QCGIRSAFGWSRMVGSTELVGGG*GAGASL
Trigger: GAGCGAAGCTCCTGCACCTCATCCTCCACCCACCAG...CTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTTGGGCAGGGCCTCACTaGGCTGTGCTAGGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGWAGPH*AVLGVV
Trigger: AACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCA...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GCCTCATCCTCATCCGGCGCCGCATCCGACCCTCCAAGACTCCTGCAGGAGCCTAACACCAGTCCATTTTaGGAAGGGCCTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ASSSSGAASDPPRLLQEPNTSPF*EGPSSQ
Trigger: CTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTT...AGGCTCCTGCAGGAGTCTTGGAGGGTCGGATGCGGCGCCGGATGAGGATGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR TCA 90 bp GTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAACACCAGTCCATTTTaGGAAGGGCCTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VQDGGEHRGSWTGRWGTRNTSPF*EGPSSQ
Trigger: CTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTT...CCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR TCA 90 bp GGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCATCACACTTGGGGGACTaGGAGCCTTTTTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GWSRMVGSTEGLGRVGGASHLGD*EPFCFH
Trigger: GTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGA...TGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCGGTTGGGCACGGTGTTaGGTCTCCTCACGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSGWARC*VSSRAR
Trigger: ACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACC...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp CTCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTACTGGGAACTTCCTTTaGGCTTGGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LTSVHGGWGPLISAHGGATGNFL*AWLLGA
Trigger: AGCTCCGAGGAGCCAAGCTCAAAGGAAGTTCCCAGT...AGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCATCGCTCTTCTTGGCCTaGCTGCCCTGCCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VGHTEGKIIRLQLAVRASSLFLA*LPCLLP
Trigger: GGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGAGCGA...TGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp ACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTGAGGCTGGCTTCTCCTaGTTGTTGCGGCTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: TKHKESSVGPAVPSALALEAGFS*LLRLRR
Trigger: CCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTC...AAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAGAGGCTGGCTTCTCCTaGTTGTTGCGGCTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLEAGFS*LLRLRR
Trigger: CCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTC...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGGGGTGGAGGATGAGGTaGAGGAGCTTCGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SFWLVQDGGEHRGSWTGRGWRMR*RSFAQS
Trigger: GCTCTGAGCGAAGCTCCTGCACCTCATCCTCCACCC...CCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGGGTGGAGGATGAGGTaGAGGAGCTTCGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRGWRMR*RSFAQS
Trigger: GCTCTGAGCGAAGCTCCTGCACCTCATCCTCCACCC...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGCATTTCCTTTCCTTTTaGCGCATTGTGGCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: QPWPLGQPSPRALSVEAAHFLSF*RIVAEE
Trigger: TTCTTCGGCCACAATGCGGCAAAAGGAAAGGAAATG...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp TTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGGTCTGAGTGTGGAGGCTaGGTAGCACCAGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: LISCRRLLRKLLTRSSSRSECGG*VAPGSG
Trigger: GCCGCTTCCTGGTGCTACGCAGCCTCCACACTCAGA...CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GCTCGCCTGGAGCTTGTAACGTGTGGTTCTGAGGGGAGCCCAAAGTCAAAGGGGCTGCTCCAACTGCTCTaGTGGGTATGGCGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ARLELVTCGSEGSPKSKGLLQLL*WVWRGG
Trigger: GCCTCCTCGCCATACCCAGCAGAGCAGTTGGAGCAG...CCCCTTTGACTTTGGGCTCCCCTCAGAACCACACGTTACAAGCTCCAGGCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CCCGATGCAGTGTCTGCAGAGCCAAACGCATCTTCCGCCACGCCTCATCCTCATCTGCTCCAACTGCTCTaGTGGGTATGGCGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PDAVSAEPNASSATPHPHLLQLL*WVWRGG
Trigger: GCCTCCTCGCCATACCCAGCAGAGCAGTTGGAGCAG...ATGAGGATGAGGCGTGGCGGAAGATGCGTTTGGCTCTGCAGACACTGCATCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp TGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACCAAGGAGATCGCCACTaGATGTTCTCGACCTGTCTG +
Preference number: 4 (lower is better)
Translates to: WSRMVGSTEGLGRVGGAHQGDRH*MFSTCL
Trigger: CAGACAGGTCGAGAACATGCAGTGGCGATCTCCTTG...GTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp TCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCACAAGACTGTGATTTaGAGGATGTGTGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: SRSGHSKSLSLAGLGSRLHKTVI*RMCVTR
Trigger: CCTTGTCACACACATCCTGCAAATCACAGTCTTGTG...AAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGAGACTCCCAAGAGAGCTaGCTGGCATGGCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGDSQES*LAWPHW
Trigger: CCAGTGGGGCCATGCCAGGCAGCTCTCTTGGGAGTC...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp GTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGACTCCCAAGAGAGCTaGCTGGCATGGCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: VGHTEGKIIRLQLAVRASDSQES*LAWPHW
Trigger: CCAGTGGGGCCATGCCAGGCAGCTCTCTTGGGAGTC...TGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGTCTGAGTGCTGGTGGTaGTCCGAGACGGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRSECWW*SETGKA
Trigger: GGCTTTCCCCGTCTCGGAGCACCACCAGCACTCAGA...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CCAGGAAGCGGCTCTGCTGAGGTCAAGGGGCCCCAGCACAGTGTGGCATCCGTTCAGGCAGCTCCTGCTTaGAACTGGGAACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PGSGSAEVKGPQHSVASVQAAPA*NWELPL
Trigger: CAAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTG...AACGGATGCCACACTGTGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGGAAGCTCTAGGACCCTaGCTGGCTGCTTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRWGTRREKLYAFSWQSGEALGP*LAAWGQ
Trigger: CTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTC...CCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTGAAGCTCTAGGACCCTaGCTGGCTGCTTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WHPFSFWLVQDGGEHRGSEALGP*LAAWGQ
Trigger: CTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTC...AGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTTGCCTTGGCCTCGCCTaGCCAGTTTCGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPCLGLA*PVSPGA
Trigger: AGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCA...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTGCCTTGGCCTCGCCTaGCCAGTTTCGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQCLGLA*PVSPGA
Trigger: AGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCA...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGTGCCTTGGCCTCGCCTaGCCAGTTTCGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QCGIRSAFGWSRMVGSTECLGLA*PVSPGA
Trigger: AGCTCCTGGCGAAACTGGCCAGGCGAGGCCAAGGCA...CTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCACCTGAGGCCGTGCCTTaGCCTCGCCTGGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSPEAVP*PRLASF
Trigger: GAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGG...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AAACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCCTGCGGCCCTTGCCCTaGGGCAAGCTCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: KPNTKRAVLGQQYHQPWPLRPLP*GKLCGL
Trigger: AAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAG...GGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CTGGGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTCAGGGCTGGGGCAGCTaGCAAGCCAGGCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: LGRASLSCARSGFLEAEVQGWGS*QARPLC
Trigger: ACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTG...AACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCTCATCCACATCTCGGTaGTCCACGGCGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGSSTSR*STAGSP
Trigger: TGGGGAGCCCGCCGTGGACCACCGAGATGTGGATGA...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp AGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGGTGGGCTGCCTTGCGGAGGTTGGTCCAGGATGGTaGGGAGCACAGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SRILQTWDLKVGVGCLAEVGPGW*GAQRVL
Trigger: CAAGACCCTCTGTGCTCCCCACCATCCTGGACCAAC...CTCCGCAAGGCAGCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGACAAAGAGAGCAGTGTTaGGCCAGCAGTACCATCAGC +
Preference number: 4 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGQREQC*ASSTIS
Trigger: GCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTG...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GAGCCCAAAGTCAAAGGGGACAGGTCAAGGTTGATGTCAGGCTGCTGCTCTGAGGTTCGTCATCCTCCCTaGGGCCGTCGTGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: EPKVKGDRSRLMSGCCSEVRHPP*GRRGRA
Trigger: AGCCCGACCACGACGGCCCCAGGGAGGATGACGAAC...CTCAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCCCTTTGACTTTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGGCCGGGCACCAGGTTaGGTTCGTCATCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYGRAPG*VRHPPW
Trigger: CCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCC...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CCA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCACCGAGCCTCGGCTTTaGGGAGAGGGGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFTEPRL*GEGSSL
Trigger: GAGGCTGGACCCCTCTCCCCAAAGCCGAGGCTCGGT...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp ACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGTCCCAGTCCCAGTGTaGGTGTACGGCCGGAACGCC +
Preference number: 4 (lower is better)
Translates to: TVWHPFSFWLVQDGGEHRVPVPV*VYGRNA
Trigger: GGCGTTCCGGCCGTACACCCACACTGGGACTGGGAC...TCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp TCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGCTCTTTCGGCAACTCTaGCAGACCCACAGAGGCATC +
Preference number: 4 (lower is better)
Translates to: SPLSMVGGGLSFLPMVGLLFRQL*QTHRGI
Trigger: GATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAG...CAGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGGAGAGCTGCCTGGCATaGCCCCACTGGAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQESCLA*PHWNVG
Trigger: CCCCACATTCCAGTGGGGCCATGCCAGGCAGCTCTC...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTGTGAGGTCTGAGTGCTaGTGGTGCTCCGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPVRSEC*WCSETG
Trigger: CCCCGTCTCGGAGCACCACCAGCACTCAGACCTCAC...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CCA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGATGCTGGCTGCGGGTaGTGGCCGGTGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSDAGCG*WPVGLL
Trigger: TAACAGCCCCACCGGCCACCACCCGCAGCCAGCATC...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CCA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAAGGTGCTGCCGGGGTaGTGGGCAGCAGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFKVLPG*WAAGVG
Trigger: ACCCACACCTGCTGCCCACCACCCCGGCAGCACCTT...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGGCACCCCGAGAATGGTaGGGGCATCTTCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQAPREW*GHLQER
Trigger: CCGCTCCTGAAGATGCCCCCACCATTCTCGGGGTGC...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTATGCCCGCTGCAGGGGTaGCTGCACCCCGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLCPLQG*LHPENG
Trigger: ACCATTCTCGGGGTGCAGCCACCCCTGCAGCGGGCA...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CTCCGTGCTGTTGATGAATTCCAGCAGCTCATCCACATCTCGGTGGTCCACGGCGTGAGTGCTAGGGAGTaGCTGAGAGCTCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRAVDEFQQLIHISVVHGVSARE*LRARGW
Trigger: CCACCCCCGAGCTCTCAGCCACTCCCTAGCACTCAC...GCCGTGGACCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTGTGAGTGCTAGGGAGTaGCTGAGAGCTCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSVSARE*LRARGW
Trigger: CCACCCCCGAGCTCTCAGCCACTCCCTAGCACTCAC...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTTCTGAGCCTCCTTCCTaGCGCCGTCTGTGCTCACGG +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSSEPPS*RRLCSR
Trigger: CCGTGAGCACAGACGGCGCCAGGAAGGAGGCTCAGA...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGCATTTCTGCCCATGGTaGGGCTGGCTCGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QCGIRSAFGWSRMVGSTEHFCPW*GWLAWS
Trigger: GCTCCAGGCGAGCCAGCCCCACCATGGGCAGAAATG...CTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGCATTTCTGCCCATGGTaGGGCTGGCTCGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQHFCPW*GWLAWS
Trigger: GCTCCAGGCGAGCCAGCCCCACCATGGGCAGAAATG...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTCTCATTTCTGCCCATaGTGGGGCTGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: SFWLVQDGGEHRGSWTGRSHFCP*WGWLAW
Trigger: CCAGGCGAGCCAGCCCCACCATGGGCAGAAATGAGA...CCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp ACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCATTGGCTCCTCGGAGCTaGGGTAGCCCGGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: TGRWGTRREKLYAFSWQSLAPRS*GSPAWV
Trigger: CACCCAAGCCGGGCTACCCCAGCTCCGAGGAGCCAA...TGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCCAGCGACCTGGCCCTTaGCACTGGGAACCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSQRPGP*HWEPLG
Trigger: GCCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTG...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGAATCCTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGCCCTGCCTGGCTGCTTaGGGCCAGCGACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GILLLFALSRILQTWDLKPCLAA*GQRPGP
Trigger: AGGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGG...CTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAGGATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAACACAGCTGCCTACTTTaGGAAGCTCTAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: GGEHRGSWTGRWGTRREKHSCLL*EALGPC
Trigger: GCAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTG...TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
3UTR CAA 72 bp GCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTaGATGAATTCCAGCAGCTCATCCACATCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: ALALLGTLGSVL*MNSSSSSTSRW
Trigger: CCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 72 bp TTGACCCAGATCACCCGGGATAGGTTGGGCACGGTGTaGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATA +
Preference number: 4 (lower is better)
Translates to: LTQITRDRLGTV*SLLTSPFSGTI
Trigger: TATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp AGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGACTCCTGATCTCAGGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: STEGLGRVGGAHGGKNYTTPDLR*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACCTGAGATCAGGAGT...CGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507212.1
ENST00000513282.5
CDS-3UTR TCA 90 bp AGGGGGCAGCTTCTCACCCTGCAACACCAGTCCATTTTGAGAAGGGCCTTCTTCCTGGTGGGTGGAGGATaGGGTGCAGGAGCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: RGQLLTLQHQSILRRAFFLVGGG*GAGASL
Trigger: GAGCGAAGCTCCTGCACCTCATCCTCCACCCACCAG...GAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp TTTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGTGGGCAGGGCCTCACTaGGCTGTGCTAGGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: FDLLQTAAQEAVDPIQFPWAGPH*AVLGVV
Trigger: AACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCA...CGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGTGGGCAGGGCCTCACTaGGCTGTGCTAGGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: GRWGTRREKLYAFSWQSGWAGPH*AVLGVV
Trigger: AACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCA...CCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTTGGGCAGGGCCTCACTaGGCTGTGCTAGGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPWAGPH*AVLGVV
Trigger: AACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCA...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp CCAGGAAGCGGCTCTGCTGAGGTCAAGGGGCCCCAGCACAGTGTGGCATCCGTTAACACCAGTCCATTTTaGGAAGGGCCTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGSGSAEVKGPQHSVASVNTSPF*EGPSSQ
Trigger: CTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTT...AACGGATGCCACACTGTGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR TCA 90 bp TTTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGAGCAACAGGGCACTCTaGAGCCTGGGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FDLLQTAAQEAVDPIQFPSNRAL*SLGRER
Trigger: CCTTTCCCTGCCCAGGCTTCAGAGTGCCCTGTTGCT...CGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTGGTAGATGGGAGCTCTaGCATGGCCCTGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPGRWEL*HGPGVW
Trigger: CCACACTCCAGGGCCATGTCAGAGCTCCCATCTACC...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR TCA 90 bp CCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGCCAGCCCATGCTCAGGAAGCTGTTaGCCCGATCCAGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PVSPGAALLLLSFGTASPCSGSC*PDPVPG
Trigger: ACCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCA...TGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGGTTGGGCACGGTGTTaGGTCTCCTCACGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSGWARC*VSSRAR
Trigger: ACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACC...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp AGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGGGTTGGGCACGGTGTTaGGTCTCCTCACGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: STEGLGRVGGAHGGKNYTGWARC*VSSRAR
Trigger: ACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACC...CGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp CTCCGTGCTGTTGATGAATTCCAGCAGCTCATCCACATCTCGGTGGTCCACGGCCCGGCTTGGGTGTCTTaGCCCAGATCACCCGGGATA +
Preference number: 4 (lower is better)
Translates to: LRAVDEFQQLIHISVVHGPAWVS*PRSPGI
Trigger: TATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGG...GCCGTGGACCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCCGGCTTGGGTGTCTTaGCCCAGATCACCCGGGATA +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSPAWVS*PRSPGI
Trigger: TATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGG...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp AAACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTCGCTCTTCTTGGCCTaGCTGCCCTGCCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: KPNTKRAVLGQQYHQPWPSLFLA*LPCLLP
Trigger: GGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGAGCGA...GGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGGGTGGAGGATGAGGTaGAGGAGCTTCGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRGWRMR*RSFAQS
Trigger: GCTCTGAGCGAAGCTCCTGCACCTCATCCTCCACCC...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACATCTGAGTGTGGAGGCTaGGTAGCACCAGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTSECGG*VAPGSG
Trigger: GCCGCTTCCTGGTGCTACGCAGCCTCCACACTCAGA...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp CTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGGTGGGCTCCCCTGCTGCCCGATaGAGTGTCTGCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LFALSRILQTWDLKVGVGSPAAR*SVCRAK
Trigger: TTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGA...GCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTGCAGTGAGGTCTGAGTaGTGGTGGTGCTCCGAGACG +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPAVRSE*WWCSET
Trigger: CGTCTCGGAGCACCACCAGCACTCAGACCTCACTGC...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGGCTTATGAGACTTTCTTCAGGAGCGGCATaGTGGTGGAGGGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: PDLGIVPTRRGSGWLMRLSSGAA*WWRVDG
Trigger: CCCATCTACCCTCCACCAGCATGCCGCTCCTGAAGA...AAGTCTCATAAGCCACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp TCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGCAAACTTGTGCCCCTTaGACCCGGGATCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SPGQFRQELPFSFSVLGLQTCAP*TRDPCE
Trigger: CTCACAGGGATCCCGGGTGCAAGGGGCACAAGTTTG...CAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGGCCAGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTTCTTTTTCAGCTTGTaGCGGGCCCGCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSFFFSL*RARLAA
Trigger: GGCCGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAA...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR GCA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGGAAACACGATTTGCCTaGTTTAGAGCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGETRFA*FRASAA
Trigger: GGCAGCAGAAGCTCTAAAGCAGGCAAATCGTGTTTC...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAGGGGCCTCTCATTTCTaGCCATGGTGGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLGASHF*PWWGWL
Trigger: GAGCCAGCCCCACCATGGGCAGAAATGAGAGGCCCC...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGCATCTCTCTGGTGGGTaGAGGATGAGGTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRHLSGG*RMRCRS
Trigger: GCTCCTGCACCTCATCCTCCACCCACCAGAGAGATG...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGAACTTCCCATCTCTCTaGTGGGTGGAGGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: SPLSMVGGGLSFLPMVGLNFPSL*WVEDEV
Trigger: CACCTCATCCTCCACCCACCAGAGAGATGGGAAGTT...CAGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GAGCCCAAAGTCAAAGGGGACAGGTCAAGGTTGATGTCAGGCTGCTGCTCTGAGGCTCCTCTTTCCGCCTaGTCAGCCTCGAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: EPKVKGDRSRLMSGCCSEAPLSA*SASSGA
Trigger: AGCTCCGCTCGAGGCTGACCAGGCGGAAAGAGGAGC...CTCAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCCCTTTGACTTTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTATCATCCACATCTCGGTaGTCCACGGCGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLSSTSR*STAGSP
Trigger: TGGGGAGCCCGCCGTGGACCACCGAGATGTGGATGA...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp AAACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTCATCCACATCTCGGTaGTCCACGGCGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KPNTKRAVLGQQYHQPWPSSTSR*STAGSP
Trigger: TGGGGAGCCCGCCGTGGACCACCGAGATGTGGATGA...GGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CCA 90 bp CACCCCGTCCATGTCCTTGGGCAGGAACACATCGTCCAAGGAGGAGGCTGGCTTTTATACGCCTTCAGCTaGCAGTCAGGGCCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: HPVHVLGQEHIVQGGGWLLYAFS*QSGPQD
Trigger: GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAA...AAGCCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAAGGACATGGACGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: VGHTEGKIIRLQLAVRASEHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...TGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGGGCCCCAGCACAGTGTaGCATCCGTTCAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: VQLLVGPGWWGAQRVLDGGPSTV*HPFSFW
Trigger: CCAAAAGCTGAACGGATGCCACACTGTGCTGGGGCC...CCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TTGGGTGTCTTGACCCAGATCACCCGGGATAGGTTGGGCACGGTGTTGAGTCTCCAGTACCATCAGCCCTaGCCCTTAGGCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LGVLTQITRDRLGTVLSLQYHQP*PLGQPS
Trigger: ACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTACTG...GAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGACACCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTTGATGAATTCCAGCCAAAGAGAGCAGTGTTaGGCCAGCAGTACCATCAGC +
Preference number: 4 (lower is better)
Translates to: AALALLGTLGSVLLMNSSQREQC*ASSTIS
Trigger: GCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTG...GCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GTTCTCGACCTGTCTGCCTTTCATCTTCCTCCATGCTCTTTCGGCAACTCTGGCGGCCGGGCACCAGGTTaGGTTCGTCATCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLDLSAFHLPPCSFGNSGGRAPG*VRHPPW
Trigger: CCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCC...GCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAAGGCAGACAGGTCGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp CTCACACACACTGAAGCTGGCACGGATGGAGTCTTTGACAGTGTTTTTGATCTCCCAGCCGCGGCAGGATaGCCCATCCCCAACCCCGCC +
Preference number: 4 (lower is better)
Translates to: LTHTEAGTDGVFDSVFDLPAAAG*PIPNPA
Trigger: GGCGGGGTTGGGGATGGGCCATCCTGCCGCGGCTGG...GAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAGTGTGTGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGCCCAAGAGAGCTGCCTaGCATGGCCCCACTGGAATG +
Preference number: 4 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQPKRAA*HGPTGM
Trigger: CATTCCAGTGGGGCCATGCCAGGCAGCTCTCTTGGG...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGGGAGCGGCATGCTGGTaGAGGGTAGATGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQGAACW*RVDGSS
Trigger: AGAGCTCCCATCTACCCTCCACCAGCATGCCGCTCC...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGCTGCACCCCGAGAATaGTGGGGGCATCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRAAPRE*WGHLQE
Trigger: CTCCTGAAGATGCCCCCACCATTCTCGGGGTGCAGC...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTACATTTCTGCCCATGGTaGGGCTGGCTCGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLHFCPW*GWLAWS
Trigger: GCTCCAGGCGAGCCAGCCCCACCATGGGCAGAAATG...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGTCTGTCCATGGTGGGTaGGGGCCTCTCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRSVHGG*GPLISA
Trigger: GGCAGAAATGAGAGGCCCCCACCCACCATGGACAGA...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTCACCTCTGTCCATGGTaGGTGGGGGCCTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGHLCPW*VGASHF
Trigger: GAAATGAGAGGCCCCCACCCACCATGGACAGAGGTG...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGCATGCCCTCTGATCTGAGCCTCCTTCCTGGCGCCGTCTGTGCTCACGGCCTGGCTCCTGCTTGCAACTaGGAACTTCCTTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SMPSDLSLLPGAVCAHGLAPACN*ELPLSL
Trigger: CAAGCTCAAAGGAAGTTCCCAGTTGCAAGCAGGAGC...CAGGCCGTGAGCACAGACGGCGCCAGGAAGGAGGCTCAGATCAGAGGGCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp AGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTTGCCTCGCTCTTCTTaGCCTGACTGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SFWLVQDGGEHRGSWTGRLPRSS*PDCPAS
Trigger: AGAGGCAGGGCAGTCAGGCCAAGAAGAGCGAGGCAA...CCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GCCTTCATCACTCCCAAGCGTTCACTTCTCTGGGATTACACACGTATACATACTCCCGCTCGGGGAAGGTaGAAGCGCCCGAGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: AFITPKRSLLWDYTRIHTPARGR*KRPSRR
Trigger: TCGGCGGCTCGGGCGCTTTCACCTTCCCCGAGCGGG...AGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCCTTTGCGTTCCCGGTaGCACAGCAGGCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWPLRSR*HSRQQV
Trigger: GACTTGCTGCCTGCTGTGTCACCGGGAACGCAAAGG...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR TCA 90 bp AGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTTGCGTTCCCGGTaGCACAGCAGGCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: STEGLGRVGGAHGGKNYTPLRSR*HSRQQV
Trigger: GACTTGCTGCCTGCTGTGTCACCGGGAACGCAAAGG...CGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR TCA 90 bp TTTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGGCAGCGGGTGGCTTATaGGACTTCTGCACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: FDLLQTAAQEAVDPIQFPAAGGL*DFCTAS
Trigger: GGAAGCAGTGCAGAAGTCTCATAAGCCACCCGCTGC...CGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCTGCTCAGGAAGCTGTTaGCCCGATCCAGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGCSGSC*PDPVPG
Trigger: ACCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCA...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGATGCTCAGGAAGCTGTTaGCCCGATCCAGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGCSGSC*PDPVPG
Trigger: ACCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCA...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACCCGGCTTGGGTGTCTTaGCCCAGATCACCCGGGATA +
Preference number: 4 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYPAWVS*PRSPGI
Trigger: TATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGG...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGACTGGGAACTTCCTTTaGGCTTGGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: VWHPFSFWLVQDGGEHRGTGNFL*AWLLGA
Trigger: AGCTCCGAGGAGCCAAGCTCAAAGGAAGTTCCCAGT...CCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp CACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAGGCCATCTCAGTTTTGGGACTaGCAGCCCAACCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HKESSVGPAVPSALALRPSQFWD*QPNLVL
Trigger: CAGGACCAGGTTGGGCTGGCAGTCCCAAAACTGAGA...TGGCCTAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GCCTCCCAGAGTCCCCTGCTGCCCGATGCAGTGTCTGCAGAGCCAAACGCATCTAGTTTCGCCAGGAGCTaGCCTTCTCCTTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ASQSPLLPDAVSAEPNASSFARS*PSPSQF
Trigger: AAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACT...AGATGCGTTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp ACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTGGGTGGAGGATGAGGTaGAGGAGCTTCGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TEGLGRVGGAHGGKNYTPGWRMR*RSFAQS
Trigger: GCTCTGAGCGAAGCTCCTGCACCTCATCCTCCACCC...AGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CCTCCCGTTATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCGGATCCCGCCCAGGGTaGCCCCCTTCATGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PPVISFAQKKVTFFQVASGSRPG*PPSWAA
Trigger: AGCTGCCCATGAAGGGGGGCACCCTGGGCGGGATCC...GCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGGCTGTCTGCTCCAACTaGTCTGCTGGGTATGGCGAG +
Preference number: 4 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQAVCSN*SAGYGE
Trigger: CTCGCCATACCCAGCAGAGCAGTTGGAGCAGACAGC...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGATGTTCTCGACCTGTCTaGCTTTCATCTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGCSRPV*LSSSSM
Trigger: CATGGAGGAAGATGAAAGGCAGACAGGTCGAGAACA...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp ACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCATCTGAGTGCTGGTGGTaGTCCGAGACGGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TGRWGTRREKLYAFSWQSSECWW*SETGKA
Trigger: GGCTTTCCCCGTCTCGGAGCACCACCAGCACTCAGA...TGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR GCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTCTGTGTGCAAACTTGTaGCCCTTGCACCCGGGATCC +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPLCANL*PLHPGS
Trigger: GGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAG...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTGGCTCAGGCAGCTCCTaGTTGCAACTGGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSGSGSS*LQLGTS
Trigger: GGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGAGCC...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGGCTCAGGCAGCTCCTaGTTGCAACTGGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTGSGSS*LQLGTS
Trigger: GGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGAGCC...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GCTCGCCTGGAGCTTGTAACGTGTGGTTCTGAGGGGAGCCCAAAGTCAAAGGGGTCTTCTTGGCCTGACTaGCCTGCCTCTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ARLELVTCGSEGSPKSKGSSWPD*PASCPS
Trigger: AGAAGGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGA...CCCCTTTGACTTTGGGCTCCCCTCAGAACCACACGTTACAAGCTCCAGGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGTCTTCTTGGCCTGACTaGCCTGCCTCTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRSSWPD*PASCPS
Trigger: AGAAGGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGA...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp CCTGCAACACCAGTCCATTTTGAGAAGGGCCTTCTTCCCAGCCTTTGCGTTCCCACCCTCCAAGACTCCTaGAGGAGCCTGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PATPVHFEKGLLPSLCVPTLQDS*RSLPSS
Trigger: GGAGGAAGGCAGGCTCCTGCAGGAGTCTTGGAGGGT...GGGAACGCAAAGGCTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507587.1
CDS-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGCCCCGTCCATGTCCTTaGGCAGGAACACATCGTCCA +
Preference number: 4 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQPRPCP*AGTHRP
Trigger: TGGACGATGTGTTCCTGCCCAAGGACATGGACGGGG...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CTTCCTCCATGCTCTTTCGGCAACTCTGGCAGACCCACAGAGGCATCTCGCCTACATCTCTCTGGTGGGTaGAGGATGAGGTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPPCSFGNSGRPTEASRLHLSGG*RMRCRS
Trigger: GCTCCTGCACCTCATCCTCCACCCACCAGAGAGATG...TAGGCGAGATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAGCATGGAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGCATCTCTCTGGTGGGTaGAGGATGAGGTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QCGIRSAFGWSRMVGSTEHLSGG*RMRCRS
Trigger: GCTCCTGCACCTCATCCTCCACCCACCAGAGAGATG...CTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTTCCCATCTCTCTGGTaGGTGGAGGATGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VWHPFSFWLVQDGGEHRGFPSLW*VEDEVQ
Trigger: CTGCACCTCATCCTCCACCCACCAGAGAGATGGGAA...CCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYEHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp ACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: TGRWGTRREKLYAFSWQSEHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...TGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: GRASLSCARSGFLEAEVGEHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...ACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
CDS-3UTR CCA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGGAGCACAGAGGGTCTTaGACGGGTAGGTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWEHRGS*TGRWGT
Trigger: TGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTGTTGGTCCAGGATGGTaGGGAGCACAGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPVGPGW*GAQRVL
Trigger: CAAGACCCTCTGTGCTCCCCACCATCCTGGACCAAC...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACTTGGTTGGTCCAGGATaGTGGGGAGCACAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GTRREKLYAFSWQSGPQDLVGPG*WGAQRV
Trigger: GACCCTCTGTGCTCCCCACCATCCTGGACCAACCAA...GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTTGGTTGGTCCAGGATaGTGGGGAGCACAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSLVGPG*WGAQRV
Trigger: GACCCTCTGTGCTCCCCACCATCCTGGACCAACCAA...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGCGTTCAGCTTTTGGTTaGTCCAGGATGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRRSAFG*SRMVGS
Trigger: GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGGCCCCAGCACAGTGTaGCATCCGTTCAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRGPSTV*HPFSFW
Trigger: CCAAAAGCTGAACGGATGCCACACTGTGCTGGGGCC...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCAGTACCATCAGCCCTaGCCCTTAGGCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GRASLSCARSGFLEAEVGQYHQP*PLGQPS
Trigger: ACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTACTG...ACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
CDS-3UTR CCA 90 bp ACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTCAGTACCATCAGCCCTaGCCCTTAGGCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TKHKESSVGPAVPSALALQYHQP*PLGQPS
Trigger: ACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTACTG...AAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTACAGTACCATCAGCCCTaGCCCTTAGGCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLQYHQP*PLGQPS
Trigger: ACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTACTG...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAGGCCACTCTTTCGGCAACTCTaGCAGACCCACAGAGGCATC +
Preference number: 4 (lower is better)
Translates to: HKESSVGPAVPSALALRPLFRQL*QTHRGI
Trigger: GATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAG...TGGCCTAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGCCAGCCCACTGGCATGGCCCCACTaGAATGTGGGGAATTCCAGA +
Preference number: 4 (lower is better)
Translates to: PVSPGAALLLLSFGTASPLAWPH*NVGNSR
Trigger: TCTGGAATTCCCCACATTCCAGTGGGGCCATGCCAG...TGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTCTGGCATGGCCCCACTaGAATGTGGGGAATTCCAGA +
Preference number: 4 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGLAWPH*NVGNSR
Trigger: TCTGGAATTCCCCACATTCCAGTGGGGCCATGCCAG...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGGGAGCCAAAGGAGCTaGGGTGAGACGGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRGSQRS*GETGLE
Trigger: CTCTAATCCCGTCTCACCCCAGCTCCTTTGGCTCCC...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGTCAGGAGCGGCATGCTaGTGGAGGGTAGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLLFALSRILQTWDLKVGSGAAC*WRVDGS
Trigger: GCTCCCATCTACCCTCCACCAGCATGCCGCTCCTGA...CCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GCTTTGGGGAATCCTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGAGCACCCCGAGAATGGTaGGGGCATCTTCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: ALGNPPTVRSQQDSPNLGAPREW*GHLQER
Trigger: CCGCTCCTGAAGATGCCCCCACCATTCTCGGGGTGC...TCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAGGATTCCCCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAGCTGCACCCCGAGAATaGTGGGGGCATCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLAAPRE*WGHLQE
Trigger: CTCCTGAAGATGCCCCCACCATTCTCGGGGTGCAGC...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGCCCGCTTGGCGGCCCTaGCGCTGTTGGGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: LCSKESDLLPGGKLEALGPAWRP*RCWGLW
Trigger: CCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGG...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCTCTCATTTCTGCCCATaGTGGGGCTGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFSHFCP*WGWLAW
Trigger: CCAGGCGAGCCAGCCCCACCATGGGCAGAAATGAGA...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTCACCTCTGTCCATGGTaGGTGGGGGCCTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPHLCPW*VGASHF
Trigger: GAAATGAGAGGCCCCCACCCACCATGGACAGAGGTG...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTTTGCCTCGCTCTTCTTaGCCTGACTGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPLPRSS*PDCPAS
Trigger: AGAGGCAGGGCAGTCAGGCCAAGAAGAGCGAGGCAA...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTTTGCCTCGCTCTTCTTaGCCTGACTGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSLPRSS*PDCPAS
Trigger: AGAGGCAGGGCAGTCAGGCCAAGAAGAGCGAGGCAA...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
3UTR CAA 72 bp AGGGGGCAGCTTCTCACCCTGCAACACCAGTCCATTTaGAGAAGGGCCTTCTTCCCAGCCTTTGCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: RGQLLTLQHQSI*RRAFFPAFAFP
Trigger: CGGGAACGCAAAGGCTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR CAA 72 bp TTTTTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTaGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: FLISCRRLLRKL*TRSSSRSGHSK
Trigger: CTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 72 bp GGCTCAGGCTCAGCAGCCCCCTCCTTAGAGAAGCCATaGCTGTCCATGCTGAGCTCACACACACTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GSGSAAPSLEKP*LSMLSSHTLKL
Trigger: CAGCTTCAGTGTGTGTGAGCTCAGCATGGACAGCAATGGCTTCTCTAAGGAGGGGGCTGCTGAGCCTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGATTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp AATCCTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTAGGAAGCGGCTCTGCTaGGGTCAAGGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: NPPTVRSQQDSPNLGSQGRKRLC*GQGAPA
Trigger: TGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCT...ACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTTCACACTTGGGGGACTaGGAGCCTTTTTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGSHLGD*EPFCFH
Trigger: GTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGA...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCAGCGGGTGGCTTATaGGACTTCTGCACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSAAGGL*DFCTAS
Trigger: GGAAGCAGTGCAGAAGTCTCATAAGCCACCCGCTGC...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGGACAGGTCAAGGTTaGTGTCAGGCTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLGRVGGAHGGKNYTPSAGTGQG*CQAAAL
Trigger: CAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCC...AGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGACTGGGAACTTCCTTTaGGCTTGGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQTGNFL*AWLLGA
Trigger: AGCTCCGAGGAGCCAAGCTCAAAGGAAGTTCCCAGT...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTTCTCAGTTTTGGGACTaGCAGCCCAACCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPSQFWD*QPNLVL
Trigger: CAGGACCAGGTTGGGCTGGCAGTCCCAAAACTGAGA...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTTCTCAGTTTTGGGACTaGCAGCCCAACCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPSQFWD*QPNLVL
Trigger: CAGGACCAGGTTGGGCTGGCAGTCCCAAAACTGAGA...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACGAGGCTGGCTTCTCCTaGTTGTTGCGGCTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SCARSGFLEAEVGPVHSNEAGFS*LLRLRR
Trigger: CCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGCCTC...GTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp AGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGACCCAGCCCCTCATCTaGCTCGCAGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSGFLEAEVGPVHSNFLTTQPLI*LAGLGQ
Trigger: CTGCCCCAGCCCTGCGAGGCAGATGAGGGGCTGGGT...CGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCACTTCTTCCCAGCCTTTaGGTTCCCGGTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: VGHTEGKIIRLQLAVRASLLPSL*VPGDTA
Trigger: TGCTGTGTCACCGGGAACGCAAAGGCTGGGAAGAAG...TGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR GCA 90 bp TCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGCAAGGAGATCGCCACTaGATGTTCTCGACCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SPGQFRQELPFSFSVLGLQGDRH*MFSTCL
Trigger: CAGACAGGTCGAGAACATGCAGTGGCGATCTCCTTG...CAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGGCCAGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp AAACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTCTTCAGGAGCGGCATaGTGGTGGAGGGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: KPNTKRAVLGQQYHQPWPSSGAA*WWRVDG
Trigger: CCCATCTACCCTCCACCAGCATGCCGCTCCTGAAGA...GGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR GCA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCCAAACTTGTGCCCCTTaGACCCGGGATCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFQTCAP*TRDPCE
Trigger: CTCACAGGGATCCCGGGTGCAAGGGGCACAAGTTTG...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp TTTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGAGCCAGGCCACTGTGTaGAAACTTGTGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: FDLLQTAAQEAVDPIQFPSQATV*KLVPLA
Trigger: TGCAAGGGGCACAAGTTTGCACACAGTGGCCTGGCT...CGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGCCAGGCCACTGTGTaGAAACTTGTGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQSQATV*KLVPLA
Trigger: TGCAAGGGGCACAAGTTTGCACACAGTGGCCTGGCT...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CTCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGAAACACGATTTGCCTaGTTTAGAGCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LTSVHGGWGPLISAHGGAETRFA*FRASAA
Trigger: GGCAGCAGAAGCTCTAAAGCAGGCAAATCGTGTTTC...AGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGCCAGCCCACAGGCAGCTCCTGCTTaGAACTGGGAACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PVSPGAALLLLSFGTASPQAAPA*NWELPL
Trigger: CAAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTG...TGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTTCTTCTTGGCCTGACTaGCCTGCCTCTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPSSWPD*PASCPS
Trigger: AGAAGGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGA...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACATCTTCTTGGCCTGACTaGCCTGCCTCTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTSSWPD*PASCPS
Trigger: AGAAGGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGA...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGCAGCCTCAGCACAGCTaGCTACTTTGGGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: VQLLVGPGWWGAQRVLDGQPQHS*LLWEAL
Trigger: TAGAGCTTCCCAAAGTAGGCAGCTGTGCTGAGGCTG...CCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTCCCCGTCCATGTCCTTaGGCAGGAACACATCGTCCA +
Preference number: 4 (lower is better)
Translates to: GLGRVGGAHGGKNYTPSAPRPCP*AGTHRP
Trigger: TGGACGATGTGTTCCTGCCCAAGGACATGGACGGGG...AGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GCAGAATCCAAACAGAACCTCTTAAAGTACTCCACCTCTCGGTCAGTCTCATCCTCTGCCTCGCAGGGCTaGGGCAGCTGGCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AESKQNLLKYSTSRSVSSSASQG*GSWQAR
Trigger: CCTGGCTTGCCAGCTGCCCCAGCCCTGCGAGGCAGA...GGATGAGACTGACCGAGAGGTGGAGTACTTTAAGAGGTTCTGTTTGGATTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTTTCCCATCTCTCTGGTaGGTGGAGGATGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPFPSLW*VEDEVQ
Trigger: CTGCACCTCATCCTCCACCCACCAGAGAGATGGGAA...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TTTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGTTCCCATCTCTCTGGTaGGTGGAGGATGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FDLLQTAAQEAVDPIQFPFPSLW*VEDEVQ
Trigger: CTGCACCTCATCCTCCACCCACCAGAGAGATGGGAA...CGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTTTCCCATCTCTCTGGTaGGTGGAGGATGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSFPSLW*VEDEVQ
Trigger: CTGCACCTCATCCTCCACCCACCAGAGAGATGGGAA...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GCTCGCCTGGAGCTTGTAACGTGTGGTTCTGAGGGGAGCCCAAAGTCAAAGGGGAACTTCCCATCTCTCTaGTGGGTGGAGGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: ARLELVTCGSEGSPKSKGNFPSL*WVEDEV
Trigger: CACCTCATCCTCCACCCACCAGAGAGATGGGAAGTT...CCCCTTTGACTTTGGGCTCCCCTCAGAACCACACGTTACAAGCTCCAGGCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTTTATACGCCTTCAGCTaGCAGTCAGGGCCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPLYAFS*QSGPQD
Trigger: GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAA...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGTTATACGCCTTCAGCTaGCAGTCAGGGCCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRLYAFS*QSGPQD
Trigger: GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAA...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCTCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGSWTGR*GTRREK
Trigger: TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQSWTGR*GTRREK
Trigger: TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACTCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: GTRREKLYAFSWQSGPQDSWTGR*GTRREK
Trigger: TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA...GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGGTTGGTCCAGGATGGTaGGGAGCACAGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWVGPGW*GAQRVL
Trigger: CAAGACCCTCTGTGCTCCCCACCATCCTGGACCAAC...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGTTGGTCCAGGATGGTaGGGAGCACAGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSVGPGW*GAQRVL
Trigger: CAAGACCCTCTGTGCTCCCCACCATCCTGGACCAAC...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCATTGGTTGGTCCAGGATaGTGGGGAGCACAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSLVGPG*WGAQRV
Trigger: GACCCTCTGTGCTCCCCACCATCCTGGACCAACCAA...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTATTGGTTGGTCCAGGATaGTGGGGAGCACAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLLVGPG*WGAQRV
Trigger: GACCCTCTGTGCTCCCCACCATCCTGGACCAACCAA...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTCGTTCAGCTTTTGGTTaGTCCAGGATGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: WHPFSFWLVQDGGEHRGSRSAFG*SRMVGS
Trigger: GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG...AGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCGGCCCCAGCACAGTGTaGCATCCGTTCAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFGPSTV*HPFSFW
Trigger: CCAAAAGCTGAACGGATGCCACACTGTGCTGGGGCC...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGGGCCGGGCACCAGGTTaGGTTCGTCATCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LCSKESDLLPGGKLEALGGRAPG*VRHPPW
Trigger: CCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCC...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGCCCAGAGCCCCGAGATaGCCTGTGGCTGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LCSKESDLLPGGKLEALGPRAPR*PVAEGA
Trigger: TGCTCCCTCAGCCACAGGCCATCTCGGGGCTCTGGG...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp ATCCGACCCTCCAAGACTCCTGCAGGAGCCTGCCTTCCTCCCGTTATCTCCTTTAAGGGCAGGTTCTGCTaGGTTTCCACCTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: IRPSKTPAGACLPPVISFKGRFC*VSTSVQ
Trigger: CTGCACTGAGGTGGAAACCCAGCAGAACCTGCCCTT...AAAGGAGATAACGGGAGGAAGGCAGGCTCCTGCAGGAGTCTTGGAGGGTCGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507587.1
CDS-3UTR CCA 90 bp CCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGCCAGCCCATTCCAGGTGGCAAGCTaGAAGCTTTGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: PVSPGAALLLLSFGTASPFQVAS*KLWGIL
Trigger: GAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAA...TGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp AGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGGTGGGCTGCCTTGCGGAGCCTCTCAGTGAACTTTaGCAGGGTACCTCCCGTTAT +
Preference number: 4 (lower is better)
Translates to: SRILQTWDLKVGVGCLAEPLSEL*QGTSRY
Trigger: ATAACGGGAGGTACCCTGCCAAAGTTCACTGAGAGG...CTCCGCAAGGCAGCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp ACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTAGGTCTGAGTGCTGGTaGTGCTCCGAGACGGGGAAA +
Preference number: 4 (lower is better)
Translates to: TEGLGRVGGAHGGKNYTPRSECW*CSETGK
Trigger: TTTCCCCGTCTCGGAGCACCACCAGCACTCAGACCT...AGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CCA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGTGCCCGCTGCAGGGGTaGCTGCACCCCGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: LCSKESDLLPGGKLEALGCPLQG*LHPENG
Trigger: ACCATTCTCGGGGTGCAGCCACCCCTGCAGCGGGCA...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGCTGGCTGTCACACTTaGGGGACTGAGAGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRAGCHT*GTESLF
Trigger: AAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGC...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGTCTGTCCATGGTGGGTaGGGGCCTCTCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LLLFALSRILQTWDLKVGSVHGG*GPLISA
Trigger: GGCAGAAATGAGAGGCCCCCACCCACCATGGACAGA...CCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGTCTGTCCATGGTGGGTaGGGGCCTCTCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWSVHGG*GPLISA
Trigger: GGCAGAAATGAGAGGCCCCCACCCACCATGGACAGA...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp ACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTCACCTCTGTCCATGGTaGGTGGGGGCCTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: TKHKESSVGPAVPSALALHLCPW*VGASHF
Trigger: GAAATGAGAGGCCCCCACCCACCATGGACAGAGGTG...AAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACCACCTCTGTCCATGGTaGGTGGGGGCCTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYHLCPW*VGASHF
Trigger: GAAATGAGAGGCCCCCACCCACCATGGACAGAGGTG...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GAGCCCAAAGTCAAAGGGGACAGGTCAAGGTTGATGTCAGGCTGCTGCTCTGAGTTGCCTCGCTCTTCTTaGCCTGACTGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: EPKVKGDRSRLMSGCCSELPRSS*PDCPAS
Trigger: AGAGGCAGGGCAGTCAGGCCAAGAAGAGCGAGGCAA...CTCAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCCCTTTGACTTTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTGGGGCCAGCGACCTaGCCCTTGGCACTGGGAACC +
Preference number: 4 (lower is better)
Translates to: AVLGVVFLRLKLVQFTATLGPAT*PLALGT
Trigger: GGTTCCCAGTGCCAAGGGCCAGGTCGCTGGCCCCAA...AGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCACAGCTGCCTACTTTaGGAAGCTCTAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSHSCLL*EALGPC
Trigger: GCAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTG...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCACAGCTGCCTACTTTaGGAAGCTCTAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: GRWGTRREKLYAFSWQSGHSCLL*EALGPC
Trigger: GCAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTG...CCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACACAGCTGCCTACTTTaGGAAGCTCTAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGHSCLL*EALGPC
Trigger: GCAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTG...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
3UTR CAA 72 bp TGGCAGACCCACAGAGGCATCTCGCCTAGGAGATTCTaGACGAGCTTTGGCATGAAGTCAGGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WQTHRGISPRRF*TSFGMKSGGSF
Trigger: GAAGCTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR CAA 72 bp CGGCTGGCTGTCACACTTGGGGGACTGAGAGCCTTTTaGCTTCCACTCTGCCTTCATCACTCCCAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: RLAVTLGGLRAF*LPLCLHHSQAF
Trigger: GAACGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR TCA 90 bp ACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTCTGGTCTTGAACTCCTaGTCTCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: TEGLGRVGGAHGGKNYTPLVLNS*SQVIHP
Trigger: CGGGTGGATCACCTGAGATCAGGAGTTCAAGACCAG...AGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507212.1
ENST00000513282.5
CDS-3UTR TCA 90 bp GAGTCCCCTGCTGCCCGATGCAGTGTCTGCAGAGCCAAACGCATCTTCCGCCACTTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ESPAARCSVCRAKRIFRHFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...GTGGCGGAAGATGCGTTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp GCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTTGATGAATTCCAGCTTGCTCAAAAGAAAGTaGCCTTCTTCCAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AALALLGTLGSVLLMNSSLLKRK*PSSRWQ
Trigger: TTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAA...GCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp CAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGTTTGCAGGATGTGTGTaGCAAGGAGATCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: QCGIRSAFGWSRMVGSTEFAGCV*QGDRHC
Trigger: GCAGTGGCGATCTCCTTGTCACACACATCCTGCAAA...CTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR TCA 90 bp ACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGACCAAAGGAGCTGGGGTaGGACGGGATTAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: TVWHPFSFWLVQDGGEHRPKELG*DGIRDA
Trigger: AGCATCTCTAATCCCGTCTCACCCCAGCTCCTTTGG...TCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR TCA 90 bp GCTTCTCACCCTGCAACACCAGTCCATTTTGAGAAGGGCCTTCTTCCCAGCCTTTGCTCAGGAAGCTGTTaGCCCGATCCAGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: ASHPATPVHFEKGLLPSLCSGSC*PDPVPG
Trigger: ACCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCA...AAGGCTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGGGTGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp ATCTCGCCTAGGAGATTCTTGACGAGCTTTGGCATGAAGTCAGGGGGCAGCTTCGGGACAGGTCAAGGTTaGTGTCAGGCTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ISPRRFLTSFGMKSGGSFGTGQG*CQAAAL
Trigger: CAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCC...GAAGCTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR TCA 90 bp GGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTACTGGGAACTTCCTTTaGGCTTGGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: GRASLSCARSGFLEAEVGTGNFL*AWLLGA
Trigger: AGCTCCGAGGAGCCAAGCTCAAAGGAAGTTCCCAGT...ACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACACTGGGAACTTCCTTTaGGCTTGGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYTGNFL*AWLLGA
Trigger: AGCTCCGAGGAGCCAAGCTCAAAGGAAGTTCCCAGT...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGTCTCAGTTTTGGGACTaGCAGCCCAACCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWSQFWD*QPNLVL
Trigger: CAGGACCAGGTTGGGCTGGCAGTCCCAAAACTGAGA...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTAGTTTCGCCAGGAGCTaGCCTTCTCCTTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGSFARS*PSPSQF
Trigger: AAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACT...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAACAGAGCTTCTCCTGCTTGTTaGGGCTCCGGCGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: WSSSQQLSDESALQNPNRASPAC*GSGGCG
Trigger: GCCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGC...TCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CTTCCTCCATGCTCTTTCGGCAACTCTGGCAGACCCACAGAGGCATCTCGCCTAAGCTTCGCTCAGAGCTaGTATCCTCTTCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: LPPCSFGNSGRPTEASRLSFAQS*YPLPHP
Trigger: TGGGTGAGGAAGAGGATAGCAGCTCTGAGCGAAGCT...TAGGCGAGATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAGCATGGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CCTCCCGTTATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCGGCAGCCTGGCTGTCTaGTCCAACTGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PPVISFAQKKVTFFQVASGSLAV*SNCSAG
Trigger: CCCAGCAGAGCAGTTGGAGCAGACAGCCAGGCTGCC...GCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp AATCCTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTCCCAGAGTCCCCTGCTaGCCGATGCAGTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NPPTVRSQQDSPNLGSQGPRVPC*PMQCLQ
Trigger: CTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGG...ACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp CCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAAGCCAGGCCACTGTGTaGAAACTTGTGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PNTKRAVLGQQYHQPWPLSQATV*KLVPLA
Trigger: TGCAAGGGGCACAAGTTTGCACACAGTGGCCTGGCT...TAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CACCCCGTCCATGTCCTTGGGCAGGAACACATCGTCCAAGGAGGAGGCTGGCTTTTTTTGCTTCCACTCTaGCTTCATCACTCCCAAGCG +
Preference number: 4 (lower is better)
Translates to: HPVHVLGQEHIVQGGGWLFLLPL*LHHSQA
Trigger: CGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAA...AAGCCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAAGGACATGGACGGGGTG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGCAGGCAGCTCCTGCTTaGAACTGGGAACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRQAAPA*NWELPL
Trigger: CAAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTG...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTCAGCCTCAGCACAGCTaGCTACTTTGGGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: WHPFSFWLVQDGGEHRGSQPQHS*LLWEAL
Trigger: TAGAGCTTCCCAAAGTAGGCAGCTGTGCTGAGGCTG...AGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCACAGCCTCAGCACAGCTaGCTACTTTGGGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: VGHTEGKIIRLQLAVRASQPQHS*LLWEAL
Trigger: TAGAGCTTCCCAAAGTAGGCAGCTGTGCTGAGGCTG...TGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTTCTCCTTCTCAGTTTTaGGACTGCCAGCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSSPSQF*DCQPNL
Trigger: CAGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGA...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGAAACTTCCCATCTCTCTaGTGGGTGGAGGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGNFPSL*WVEDEV
Trigger: CACCTCATCCTCCACCCACCAGAGAGATGGGAAGTT...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTAACTTCCCATCTCTCTaGTGGGTGGAGGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPNFPSL*WVEDEV
Trigger: CACCTCATCCTCCACCCACCAGAGAGATGGGAAGTT...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACTTATACGCCTTCAGCTaGCAGTCAGGGCCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYLYAFS*QSGPQD
Trigger: GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAA...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp ACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTTTATACGCCTTCAGCTaGCAGTCAGGGCCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TKHKESSVGPAVPSALALLYAFS*QSGPQD
Trigger: GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAA...AAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTTCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: GLGRVGGAHGGKNYTPSASWTGR*GTRREK
Trigger: TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA...AGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGTCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWSWTGR*GTRREK
Trigger: TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp ACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGACGTTCAGCTTTTGGTTaGTCCAGGATGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TVWHPFSFWLVQDGGEHRRSAFG*SRMVGS
Trigger: GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG...TCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCCAAAGAGAGCAGTGTTaGGCCAGCAGTACCATCAGC +
Preference number: 4 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGQREQC*ASSTIS
Trigger: GCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTG...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACCAAAGAGAGCAGTGTTaGGCCAGCAGTACCATCAGC +
Preference number: 4 (lower is better)
Translates to: GTRREKLYAFSWQSGPQDQREQC*ASSTIS
Trigger: GCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTG...GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CCAGCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCGCAAGCTGGAAGCTTTaGGGAATCCTCCTACTGTTC +
Preference number: 4 (lower is better)
Translates to: PAQCGIRSAFGWSRMVGSASWKL*GILLLF
Trigger: GAACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGC...GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGATTCTTGACGAGCTTTaGCATGAAGTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VWHPFSFWLVQDGGEHRGILDEL*HEVRGQ
Trigger: CTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAAT...CCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCACTGGCATGGCCCCACTaGAATGTGGGGAATTCCAGA +
Preference number: 4 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSLAWPH*NVGNSR
Trigger: TCTGGAATTCCCCACATTCCAGTGGGGCCATGCCAG...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp TTGGGTGTCTTGACCCAGATCACCCGGGATAGGTTGGGCACGGTGTTGAGTCTCGCTGGCTGTCACACTTaGGGGACTGAGAGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LGVLTQITRDRLGTVLSLAGCHT*GTESLF
Trigger: AAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGC...GAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGACACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAGGCCAGCTCCTGCTTGCAACTaGGAACTTCCTTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: HKESSVGPAVPSALALRPAPACN*ELPLSL
Trigger: CAAGCTCAAAGGAAGTTCCCAGTTGCAAGCAGGAGC...TGGCCTAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTCCTGGCCCTTGGCACTaGGAACCTCTAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AVLGVVFLRLKLVQFTATPGPWH*EPLGWL
Trigger: CAGCCAGCCTAGAGGTTCCCAGTGCCAAGGGCCAGG...AGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCACACAGCTGCCTACTTTaGGAAGCTCTAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSHSCLL*EALGPC
Trigger: GCAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTG...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GCCTTCATCACTCCCAAGCGTTCACTTCTCTGGGATTACACACGTATACATACTAGGAAGCGGCTCTGCTaGGGTCAAGGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AFITPKRSLLWDYTRIHTRKRLC*GQGAPA
Trigger: TGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCT...AGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTTTTGCAGGATGTGTGTaGCAAGGAGATCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GRASLSCARSGFLEAEVGFAGCV*QGDRHC
Trigger: GCAGTGGCGATCTCCTTGTCACACACATCCTGCAAA...ACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR TCA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGGAAGACGAGGACGAATaGGAGTCATCTCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQEDEDE*ESSPQD
Trigger: GTCTTGTGGAGATGACTCTCATTCGTCCTCGTCTTC...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR TCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGAGAAGACGAGGACGAATaGGAGTCATCTCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGEDEDE*ESSPQD
Trigger: GTCTTGTGGAGATGACTCTCATTCGTCCTCGTCTTC...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR TCA 90 bp CTGGGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTTCACACTTGGGGGACTaGGAGCCTTTTTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LGRASLSCARSGFLEAEVSHLGD*EPFCFH
Trigger: GTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGA...AACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCTGTAACGTGTGGTTCTaGGGGGAGCCCAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGCNVWF*GEPKVK
Trigger: TTTGACTTTGGGCTCCCCTCAGAACCACACGTTACA...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTTGTAACGTGTGGTTCTaGGGGGAGCCCAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPCNVWF*GEPKVK
Trigger: TTTGACTTTGGGCTCCCCTCAGAACCACACGTTACA...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGAGTTTCGCCAGGAGCTaGCCTTCTCCTTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRSFARS*PSPSQF
Trigger: AAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACT...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTTCGCTCAGAGCTaGTATCCTCTTCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFSFAQS*YPLPHP
Trigger: TGGGTGAGGAAGAGGATAGCAGCTCTGAGCGAAGCT...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp AGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTCTGAGTGTGGAGGCTaGGTAGCACCAGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: SCARSGFLEAEVGPVHSNSECGG*VAPGSG
Trigger: GCCGCTTCCTGGTGCTACGCAGCCTCCACACTCAGA...GTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
CDS-3UTR GCA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCGGGTTTCCACCTCAGTaGAGAAACCCCACCAAAAAC +
Preference number: 4 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGGFPPQ*RNPTKN
Trigger: GTTTTTGGTGGGGTTTCTGCACTGAGGTGGAAACCC...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp GTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTTTCATCTTCCTCCATaGTCTTTCGGCAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: VQLLVGPGWWGAQRVLDGFHLPP*SFGNSG
Trigger: GCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAA...CCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp GTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTTTTTGCTTCCACTCTaGCTTCATCACTCCCAAGCG +
Preference number: 4 (lower is better)
Translates to: VWHPFSFWLVQDGGEHRGFLLPL*LHHSQA
Trigger: CGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAA...CCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CTCCTGCAGGAGCCTGCCTTCCTGGGCAGGCTCAGCCAAAAGACCAACTCAAAAGTGTTTTTGATCTCCTaGAGACGGCTGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLQEPAFLGRLSQKTNSKVFLIS*RRLLRK
Trigger: CTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACAC...TTTTGAGTTGGTCTTTTGGCTGAGCCTGCCCAGGAAGGCAGGCTCCTGCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCGTGTTTTTGATCTCCTaGAGACGGCTGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSVFLIS*RRLLRK
Trigger: CTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACAC...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGGTGTTTTTGATCTCCTaGAGACGGCTGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQVFLIS*RRLLRK
Trigger: CTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACAC...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCGGGGCCTCTCATTTCTaGCCATGGTGGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VLGVVFLRLKLVQFTATFGASHF*PWWGWL
Trigger: GAGCCAGCCCCACCATGGGCAGAAATGAGAGGCCCC...GAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp ATCTCGCCTAGGAGATTCTTGACGAGCTTTGGCATGAAGTCAGGGGGCAGCTTCTCTTCTTGGCCTGACTaGCCTGCCTCTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ISPRRFLTSFGMKSGGSFSSWPD*PASCPS
Trigger: AGAAGGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGA...GAAGCTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CTGGGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTTCTCCTTCTCAGTTTTaGGACTGCCAGCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: LGRASLSCARSGFLEAEVSPSQF*DCQPNL
Trigger: CAGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGA...AACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GCCTTCATCACTCCCAAGCGTTCACTTCTCTGGGATTACACACGTATACATACTCTGCGGCCCTTGCCCTaGGGCAAGCTCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: AFITPKRSLLWDYTRIHTLRPLP*GKLCGL
Trigger: AAGGCCACAGAGCTTGCCCCAGGGCAAGGGCCGCAG...AGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp ATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTGTTCGTCATCCTCCCTaGGGCCGTCGTGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: ISFAQKKVTFFQVASWKLVRHPP*GRRGRA
Trigger: AGCCCGACCACGACGGCCCCAGGGAGGATGACGAAC...AAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp GGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTCCAACTGCTCTGCTaGGTATGGCGAGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GFLEAEVGPVHSNFLTSLLQLLC*VWRGGA
Trigger: GGCGCCTCCTCGCCATACCCAGCAGAGCAGTTGGAG...CAGACTCGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp ATCCGACCCTCCAAGACTCCTGCAGGAGCCTGCCTTCCTCCCGTTATCTCCTTTGCAAGCTGGAAGCTTTaGGGAATCCTCCTACTGTTC +
Preference number: 4 (lower is better)
Translates to: IRPSKTPAGACLPPVISFASWKL*GILLLF
Trigger: GAACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGC...AAAGGAGATAACGGGAGGAAGGCAGGCTCCTGCAGGAGTCTTGGAGGGTCGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507587.1
CDS-3UTR CCA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGATTCTTGACGAGCTTTaGCATGAAGTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRILDEL*HEVRGQ
Trigger: CTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAAT...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp AGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGGTGAGGTCTGAGTGCTaGTGGTGCTCCGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: RSGFLEAEVGPVHSNFLTVRSEC*WCSETG
Trigger: CCCCGTCTCGGAGCACCACCAGCACTCAGACCTCAC...CGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GAAGTTGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAGATGCTGGCTGCGGGTaGTGGCCGGTGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: EVGPVHSNFLTSLLCRIQDAGCG*WPVGLL
Trigger: TAACAGCCCCACCGGCCACCACCCGCAGCCAGCATC...TTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp TGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAACAGAGGCCTGTCCCTCGGCTaGCTGTCACACTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: WSSSQQLSDESALQNPNRGLSLG*LSHLGD
Trigger: GTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCC...TCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGCTCCTGCTTGCAACTaGGAACTTCCTTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: QCGIRSAFGWSRMVGSTEAPACN*ELPLSL
Trigger: CAAGCTCAAAGGAAGTTCCCAGTTGCAAGCAGGAGC...CTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp AGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGCAGCGACCTGGCCCTTaGCACTGGGAACCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: RSGFLEAEVGPVHSNFLTQRPGP*HWEPLG
Trigger: GCCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTG...CGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp TTGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTGACCCGATCCAGTTCCCGGTTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LISCRRLLRKLLTRSSSRFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp CCAGCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCTTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PAQCGIRSAFGWSRMVGSFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp ACAATTCCAGAGATTCTACTAGAAGGCTGTCAAGAGCCATGCCTTCTGGCTGCACCTTTGCGTTCCCGGTaGCACAGCAGGCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TIPEILLEGCQEPCLLAAPLRSR*HSRQQV
Trigger: GACTTGCTGCCTGCTGTGTCACCGGGAACGCAAAGG...TGCAGCCAGAAGGCATGGCTCTTGACAGCCTTCTAGTAGAATCTCTGGAATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR TCA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGAAGACGAGGACGAATaGGAGTCATCTCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYEDEDE*ESSPQD
Trigger: GTCTTGTGGAGATGACTCTCATTCGTCCTCGTCTTC...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR TCA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGTGTAACGTGTGGTTCTaGGGGGAGCCCAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWCNVWF*GEPKVK
Trigger: TTTGACTTTGGGCTCCCCTCAGAACCACACGTTACA...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp ACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTTGTAACGTGTGGTTCTaGGGGGAGCCCAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: TKHKESSVGPAVPSALALCNVWF*GEPKVK
Trigger: TTTGACTTTGGGCTCCCCTCAGAACCACACGTTACA...AAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGTTTCGCCAGGAGCTaGCCTTCTCCTTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFSFARS*PSPSQF
Trigger: AAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACT...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp ACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTAGTTTCGCCAGGAGCTaGCCTTCTCCTTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TEGLGRVGGAHGGKNYTPSFARS*PSPSQF
Trigger: AAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACT...AGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GGAATCCTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGCCCGATGCAGTGTCTaGAGAGCCAAACGCATCTTC +
Preference number: 4 (lower is better)
Translates to: GILLLFALSRILQTWDLKARCSV*RAKRIF
Trigger: GAAGATGCGTTTGGCTCTGCAGACACTGCATCGGGC...CTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAGGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp ACAATTCCAGAGATTCTACTAGAAGGCTGTCAAGAGCCATGCCTTCTGGCTGCAGGCTGTCAAGAGCCATaGCTTCTGGCTGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: TIPEILLEGCQEPCLLAAGCQEP*LLAAPA
Trigger: GGCTGGTGCAGCCAGAAGGCATGGCTCTTGACAGCC...TGCAGCCAGAAGGCATGGCTCTTGACAGCCTTCTAGTAGAATCTCTGGAATTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCTTTCATCTTCCTCCATaGTCTTTCGGCAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGFHLPP*SFGNSG
Trigger: GCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAA...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp GCAGAATCCAAACAGAACCTCTTAAAGTACTCCACCTCTCGGTCAGTCTCATCCTTCTTTTTCAGCTTGTaGCGGGCCCGCTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AESKQNLLKYSTSRSVSSFFFSL*RARLAA
Trigger: GGCCGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAA...GGATGAGACTGACCGAGAGGTGGAGTACTTTAAGAGGTTCTGTTTGGATTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTGAAACACGATTTGCCTaGTTTAGAGCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPETRFA*FRASAA
Trigger: GGCAGCAGAAGCTCTAAAGCAGGCAAATCGTGTTTC...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGTGTTTTTGATCTCCTaGAGACGGCTGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSVFLIS*RRLLRK
Trigger: CTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACAC...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTCCCCGTCCATGTCCTTaGGCAGGAACACATCGTCCA +
Preference number: 4 (lower is better)
Translates to: AVLGVVFLRLKLVQFTATPRPCP*AGTHRP
Trigger: TGGACGATGTGTTCCTGCCCAAGGACATGGACGGGG...AGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACATTCTTGACGAGCTTTaGCATGAAGTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYILDEL*HEVRGQ
Trigger: CTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAAT...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp TGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAACAGAGAGAGCTGCCTGGCATaGCCCCACTGGAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: WSSSQQLSDESALQNPNRESCLA*PHWNVG
Trigger: CCCCACATTCCAGTGGGGCCATGCCAGGCAGCTCTC...TCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGGGGAGCCAAAGGAGCTaGGGTGAGACGGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: LCSKESDLLPGGKLEALGGSQRS*GETGLE
Trigger: CTCTAATCCCGTCTCACCCCAGCTCCTTTGGCTCCC...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp AGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGGCTGCACCCCGAGAATaGTGGGGGCATCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RSGFLEAEVGPVHSNFLTAAPRE*WGHLQE
Trigger: CTCCTGAAGATGCCCCCACCATTCTCGGGGTGCAGC...CGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp ATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTCTGAGCCTCCTTCCTaGCGCCGTCTGTGCTCACGG +
Preference number: 4 (lower is better)
Translates to: ISFAQKKVTFFQVASWKLSEPPS*RRLCSR
Trigger: CCGTGAGCACAGACGGCGCCAGGAAGGAGGCTCAGA...AAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp AGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGGCTCCTGCTTGCAACTaGGAACTTCCTTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: STEGLGRVGGAHGGKNYTAPACN*ELPLSL
Trigger: CAAGCTCAAAGGAAGTTCCCAGTTGCAAGCAGGAGC...CGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAATCCTCTTGCCTCGCTCTTCTTaGCCTGACTGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QKKVTFFQVASWKLWGILLPRSS*PDCPAS
Trigger: AGAGGCAGGGCAGTCAGGCCAAGAAGAGCGAGGCAA...GAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
3UTR CAA 72 bp GAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTaGGGGAATCCTCCTACTGTTCGCTCTCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: ESDLLPGGKLEA*GNPPTVRSQQD
Trigger: ATCCTGCTGAGAGCGAACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
3UTR CAA 72 bp CTGAAGCTGGCACGGATGGAGTCTTTGACAGTGTTTTaGATCTCCTGCAGACGGCTGCTCAGGAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LKLARMESLTVF*ISCRRLLRKLL
Trigger: CAACAGCTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
3UTR CAA 72 bp AGCTCACACACACTGAAGCTGGCACGGATGGAGTCTTaGACAGTGTTTTTGATCTCCTGCAGACGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSHTLKLARMES*TVFLISCRRLL
Trigger: GAGCAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAGTGTGTGTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp GCAGAATCCAAACAGAACCTCTTAAAGTACTCCACCTCTCGGTCAGTCTCATCCGGGACAGGTCAAGGTTaGTGTCAGGCTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AESKQNLLKYSTSRSVSSGTGQG*CQAAAL
Trigger: CAGAGCAGCAGCCTGACATCAACCTTGACCTGTCCC...GGATGAGACTGACCGAGAGGTGGAGTACTTTAAGAGGTTCTGTTTGGATTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CTTCCTCCATGCTCTTTCGGCAACTCTGGCAGACCCACAGAGGCATCTCGCCTACATTTCCTTTCCTTTTaGCGCATTGTGGCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: LPPCSFGNSGRPTEASRLHFLSF*RIVAEE
Trigger: TTCTTCGGCCACAATGCGGCAAAAGGAAAGGAAATG...TAGGCGAGATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAGCATGGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp CTCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGGGCAAATGTTTAGTTaGTCTGAGTTTCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LTSVHGGWGPLISAHGGAGQMFS*SEFLFL
Trigger: AAGAAACAGAAACTCAGAGCAACTAAACATTTGCCC...AGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp AAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAATCCTCCTACTTCTTCCCAGCCTTTaGGTTCCCGGTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: KKVTFFQVASWKLWGILLLLPSL*VPGDTA
Trigger: TGCTGTGTCACCGGGAACGCAAAGGCTGGGAAGAAG...TAGGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp CTGGGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTTTTCATCTTCCTCCATaGTCTTTCGGCAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: LGRASLSCARSGFLEAEVFHLPP*SFGNSG
Trigger: GCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAA...AACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp TTGGGGACTTTGGGCTCCGTGCTGTTGATGAATTCCAGCAGCTCATCCACATCTCAAGGAGATCGCCACTaGATGTTCTCGACCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGTLGSVLLMNSSSSSTSQGDRH*MFSTCL
Trigger: CAGACAGGTCGAGAACATGCAGTGGCGATCTCCTTG...AGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GCAGAATCCAAACAGAACCTCTTAAAGTACTCCACCTCTCGGTCAGTCTCATCCGCCCGAGAGCTTATGTaGCGACAGGAACGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: AESKQNLLKYSTSRSVSSARELM*RQERAR
Trigger: CCTAGCTCGTTCCTGTCGGCACATAAGCTCTCGGGC...GGATGAGACTGACCGAGAGGTGGAGTACTTTAAGAGGTTCTGTTTGGATTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GTTATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGGCAGTGAGGTCTGAGTaGTGGTGGTGCTCCGAGACG +
Preference number: 4 (lower is better)
Translates to: VISFAQKKVTFFQVASWKAVRSE*WWCSET
Trigger: CGTCTCGGAGCACCACCAGCACTCAGACCTCACTGC...CTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp AGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGGAAACACGATTTGCCTaGTTTAGAGCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: STEGLGRVGGAHGGKNYTETRFA*FRASAA
Trigger: GGCAGCAGAAGCTCTAAAGCAGGCAAATCGTGTTTC...CGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CCCGATGCAGTGTCTGCAGAGCCAAACGCATCTTCCGCCACGCCTCATCCTCATTCTGACACCTACAGTTaGAGTCATTTGGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: PDAVSAEPNASSATPHPHSDTYS*SHLGKC
Trigger: ACATTTGCCCAAATGACTCCAACTGTAGGTGTCAGA...ATGAGGATGAGGCGTGGCGGAAGATGCGTTTGGCTCTGCAGACACTGCATCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGCTCTTTCGGCAACTCTaGCAGACCCACAGAGGCATC +
Preference number: 4 (lower is better)
Translates to: LCSKESDLLPGGKLEALGLFRQL*QTHRGI
Trigger: GATGCCTCTGTGGGTCTGCCAGAGTTGCCGAAAGAG...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp GCCTTCATCACTCCCAAGCGTTCACTTCTCTGGGATTACACACGTATACATACTGGAGCGGCATGCTGGTaGAGGGTAGATGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AFITPKRSLLWDYTRIHTGAACW*RVDGSS
Trigger: AGAGCTCCCATCTACCCTCCACCAGCATGCCGCTCC...AGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GCCTTCATCACTCCCAAGCGTTCACTTCTCTGGGATTACACACGTATACATACTTCTCATTTCTGCCCATaGTGGGGCTGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: AFITPKRSLLWDYTRIHTSHFCP*WGWLAW
Trigger: CCAGGCGAGCCAGCCCCACCATGGGCAGAAATGAGA...AGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR TCA 90 bp CTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGGTGGGCTTCTTTTCTTTTGTCTaGCACCTACAGTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LFALSRILQTWDLKVGVGFFSFV*HLQLES
Trigger: TGACTCCAACTGTAGGTGTCAGACAAAAGAAAAGAA...GCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp TGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGGCGGCTGCGGCCCTTaGCCTGGGGCAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CVQMLLYLSARKIFTVSKGGCGP*PGASSV
Trigger: CACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCC...TTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAAGAAGGGCAGGTTCTaGTGGGTTTCCACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LCSKESDLLPGGKLEALGKKGRF*WVSTSV
Trigger: CACTGAGGTGGAAACCCAGCAGAACCTGCCCTTCTT...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp TCGCCTGGCCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGTCCCGTTATCTCCTTTaGTCAAAAGAAAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: SPGQFRQELPFSFSVLGLSRYLL*SKESDL
Trigger: AAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGA...CAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGGCCAGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCACAAGACTGTGATTTaGAGGATGTGTGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWHKTVI*RMCVTR
Trigger: CCTTGTCACACACATCCTGCAAATCACAGTCTTGTG...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp AGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACCAGGCAGCTCCTGCTTaGAACTGGGAACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SCARSGFLEAEVGPVHSNQAAPA*NWELPL
Trigger: CAAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTG...GTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp AGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTCTGTGTCCAAATGTTaGTTTATCTTTCGGCACGAA +
Preference number: 4 (lower is better)
Translates to: SFWLVQDGGEHRGSWTGRSVSKC*FIFRHE
Trigger: TTCGTGCCGAAAGATAAAGCAACATTTGGACACAGA...CCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513282.5
ENST00000514747.6
CDS-3UTR GCA 90 bp ATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTACTCCTGCAGGAGCCTaGCTTCCTCCCGTTATCTCC +
Preference number: 4 (lower is better)
Translates to: ISFAQKKVTFFQVASWKLTPAGA*LPPVIS
Trigger: GGAGATAACGGGAGGAAGGCAGGCTCCTGCAGGAGT...AAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507587.1
CDS-3UTR CCA 90 bp AAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAATCCTCCTATTCCAGGTGGCAAGCTaGAAGCTTTGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: KKVTFFQVASWKLWGILLFQVAS*KLWGIL
Trigger: GAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAA...TAGGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp GAAGTTGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAATCTGTCCATGGTGGGTaGGGGCCTCTCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: EVGPVHSNFLTSLLCRIQSVHGG*GPLISA
Trigger: GGCAGAAATGAGAGGCCCCCACCCACCATGGACAGA...TTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR TCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTGTGCTAGGGAGTGGCTaGGAGCTCGGGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSVLGSG*ELGGGR
Trigger: CCTCCCACCCCCGAGCTCTCAGCCACTCCCTAGCAC...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTACCCAGCCCCTCATCTaGCTCGCAGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSTQPLI*LAGLGQ
Trigger: CTGCCCCAGCCCTGCGAGGCAGATGAGGGGCTGGGT...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp AGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGAGCTTCGCTCAGAGCTaGTATCCTCTTCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: RSGFLEAEVGPVHSNFLTSFAQS*YPLPHP
Trigger: TGGGTGAGGAAGAGGATAGCAGCTCTGAGCGAAGCT...CGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp ATCCGACCCTCCAAGACTCCTGCAGGAGCCTGCCTTCCTCCCGTTATCTCCTTTTCCCGTTATCTCCTTTaGTCAAAAGAAAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: IRPSKTPAGACLPPVISFSRYLL*SKESDL
Trigger: AAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGA...AAAGGAGATAACGGGAGGAAGGCAGGCTCCTGCAGGAGTCTTGGAGGGTCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507587.1
CDS-3UTR GCA 90 bp CTGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAACCACCCAGCCCCGAGTaGCACAACCCTCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LCPNVALSFGTKDLHSIKPPSPE*HNPPRA
Trigger: TGCTCTGGGAGGGTTGTGGCACTCGGGGCTGGGTGG...TTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR GCA 90 bp GCAGAATCCAAACAGAACCTCTTAAAGTACTCCACCTCTCGGTCAGTCTCATCCCAGCCTCAGCACAGCTaGCTACTTTGGGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: AESKQNLLKYSTSRSVSSQPQHS*LLWEAL
Trigger: TAGAGCTTCCCAAAGTAGGCAGCTGTGCTGAGGCTG...GGATGAGACTGACCGAGAGGTGGAGTACTTTAAGAGGTTCTGTTTGGATTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGATCTGTGTCCAAATGTTaGTTTATCTTTCGGCACGAA +
Preference number: 4 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGSVSKC*FIFRHE
Trigger: TTCGTGCCGAAAGATAAAGCAACATTTGGACACAGA...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513282.5
ENST00000514747.6
CDS-3UTR CCA 90 bp TCCCGTTATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGTCTCCTTCTCAGTTTTaGGACTGCCAGCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: SRYLLCSKESDLLPGGKLSPSQF*DCQPNL
Trigger: CAGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGA...CAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp GTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGCCTGAGGCCGTGCCTTaGCCTCGCCTGGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VSKCCFIFRHERSSQYQKPEAVP*PRLASF
Trigger: GAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGG...CTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGCAGGGCTGGGGCAGCTaGCAAGCCAGGCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: VSKCCFIFRHERSSQYQKQGWGS*QARPLC
Trigger: ACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTG...CTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp TGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAACAGATCTTGGACGGGTAGGTaGGGCACACGGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: WSSSQQLSDESALQNPNRSWTGR*GTRREK
Trigger: TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA...TCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
CDS-3UTR CCA 90 bp GAAGTTGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAAAGGGCAGGTTCTGCTaGGTTTCCACCTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: EVGPVHSNFLTSLLCRIQKGRFC*VSTSVQ
Trigger: CTGCACTGAGGTGGAAACCCAGCAGAACCTGCCCTT...TTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp AAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAATCCTCCTAATTCTTGACGAGCTTTaGCATGAAGTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KKVTFFQVASWKLWGILLILDEL*HEVRGQ
Trigger: CTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAAT...TAGGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp CAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGAAGCGTTCACTTCTCTaGGATTACACACGTATACAT +
Preference number: 4 (lower is better)
Translates to: QCGIRSAFGWSRMVGSTEKRSLL*DYTRIH
Trigger: ATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTT...CTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp AGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGGCTGGCTGTCACACTTaGGGGACTGAGAGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: RSGFLEAEVGPVHSNFLTAGCHT*GTESLF
Trigger: AAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGC...CGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTCCCGCTTGGCGGCCCTaGCGCTGTTGGGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSPAWRP*RCWGLW
Trigger: CCAAAGTCCCCAACAGCGCCAGGGCCGCCAAGCGGG...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR TCA 90 bp GTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTCGCTCTTCTTGGCCTaGCTGCCCTGCCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VSKCCFIFRHERSSQYQKSLFLA*LPCLLP
Trigger: GGGCAAGAGGCAGGGCAGTCAGGCCAAGAAGAGCGA...CTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp AAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAATCCTCCTATTTTTGCTTCCACTCTaGCTTCATCACTCCCAAGCG +
Preference number: 4 (lower is better)
Translates to: KKVTFFQVASWKLWGILLFLLPL*LHHSQA
Trigger: CGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAA...TAGGAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CCA 90 bp TGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAACAGATCTCCTTCTCAGTTTTaGGACTGCCAGCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: WSSSQQLSDESALQNPNRSPSQF*DCQPNL
Trigger: CAGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGA...TCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTCCTGAGGCCGTGCCTTaGCCTCGCCTGGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSPEAVP*PRLASF
Trigger: GAAACTGGCCAGGCGAGGCCAAGGCACGGCCTCAGG...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp GCCTTCATCACTCCCAAGCGTTCACTTCTCTGGGATTACACACGTATACATACTCAAAGAGAGCAGTGTTaGGCCAGCAGTACCATCAGC +
Preference number: 4 (lower is better)
Translates to: AFITPKRSLLWDYTRIHTQREQC*ASSTIS
Trigger: GCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTG...AGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp GTTATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGAGGATTCTCCAAACCTaGGATCTCAAGGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: VISFAQKKVTFFQVASWKRILQT*DLKVGV
Trigger: CACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCT...CTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTTTGGCTCCTCGGAGCTaGGGTAGCCCGGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSLAPRS*GSPAWV
Trigger: CACCCAAGCCGGGCTACCCCAGCTCCGAGGAGCCAA...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTTTGGGGCCAGCGACCTaGCCCTTGGCACTGGGAACC +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSLGPAT*PLALGT
Trigger: GGTTCCCAGTGCCAAGGGCCAGGTCGCTGGCCCCAA...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTGGGAGCAGTGAGGTCTaGGTGCTGGTGGTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSGSSEV*VLVVLR
Trigger: TCGGAGCACCACCAGCACTCAGACCTCACTGCTCCC...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR GCA 90 bp GTTATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGGGGTTTCCACCTCAGTaGAGAAACCCCACCAAAAAC +
Preference number: 4 (lower is better)
Translates to: VISFAQKKVTFFQVASWKGFPPQ*RNPTKN
Trigger: GTTTTTGGTGGGGTTTCTGCACTGAGGTGGAAACCC...CTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp TCCCGTTATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGTGTTCTCGACCTGTCTaGCTTTCATCTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: SRYLLCSKESDLLPGGKLCSRPV*LSSSSM
Trigger: CATGGAGGAAGATGAAAGGCAGACAGGTCGAGAACA...CAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTGACTCCCAAGAGAGCTaGCTGGCATGGCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSDSQES*LAWPHW
Trigger: CCAGTGGGGCCATGCCAGGCAGCTCTCTTGGGAGTC...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp TTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGAATTGGTTGGGGCCAGCGACCTaGCCCTTGGCACTGGGAACC +
Preference number: 4 (lower is better)
Translates to: LLYLSARKIFTVSKVKNWLGPAT*PLALGT
Trigger: GGTTCCCAGTGCCAAGGGCCAGGTCGCTGGCCCCAA...CCAATTCTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp ACAATTCCAGAGATTCTACTAGAAGGCTGTCAAGAGCCATGCCTTCTGGCTGCATTGCTCAAAAGAAAGTaGCCTTCTTCCAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: TIPEILLEGCQEPCLLAALLKRK*PSSRWQ
Trigger: TTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAA...TGCAGCCAGAAGGCATGGCTCTTGACAGCCTTCTAGTAGAATCTCTGGAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR TCA 90 bp TTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGAATTGGGGTTGGGCACGGTGTTaGGTCTCCTCACGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: LLYLSARKIFTVSKVKNWGWARC*VSSRAR
Trigger: ACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACC...CCAATTCTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAATCTGAGTGTGGAGGCTaGGTAGCACCAGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: CVQMLLYLSARKIFTVSKSECGG*VAPGSG
Trigger: GCCGCTTCCTGGTGCTACGCAGCCTCCACACTCAGA...TTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
CDS-3UTR GCA 90 bp ATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTTTCATCTTCCTCCATaGTCTTTCGGCAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: ISFAQKKVTFFQVASWKLFHLPP*SFGNSG
Trigger: GCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAA...AAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR GCA 90 bp GTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCCACAAGACTGTGATTTaGAGGATGTGTGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: VLGVVFLRLKLVQFTATFHKTVI*RMCVTR
Trigger: CCTTGTCACACACATCCTGCAAATCACAGTCTTGTG...GAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR GCA 90 bp GTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGGCCCGAGAGCTTATGTaGCGACAGGAACGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: VSKCCFIFRHERSSQYQKARELM*RQERAR
Trigger: CCTAGCTCGTTCCTGTCGGCACATAAGCTCTCGGGC...CTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp GAAGTTGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAGAAACACGATTTGCCTaGTTTAGAGCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EVGPVHSNFLTSLLCRIQETRFA*FRASAA
Trigger: GGCAGCAGAAGCTCTAAAGCAGGCAAATCGTGTTTC...TTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR GCA 90 bp CAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGGAAGCTCTAGGACCCTaGCTGGCTGCTTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QMLLYLSARKIFTVSKVKEALGP*LAAWGQ
Trigger: CTGGCCCCAAGCAGCCAGGCAGGGTCCTAGAGCTTC...CTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp CTGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGGTCTGAGTGCTGGTaGTGCTCCGAGACGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LCPNVALSFGTKDLHSIKRSECW*CSETGK
Trigger: TTTCCCCGTCTCGGAGCACCACCAGCACTCAGACCT...TTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR TCA 90 bp TGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAACAGATTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: WSSSQQLSDESALQNPNRFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...TCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
CDS-3UTR GCA 90 bp GTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGAGCCAGGCCACTGTGTaGAAACTTGTGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: VSKCCFIFRHERSSQYQKSQATV*KLVPLA
Trigger: TGCAAGGGGCACAAGTTTGCACACAGTGGCCTGGCT...CTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp TTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGAATTGGTCTCATTTCTGCCCATaGTGGGGCTGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLYLSARKIFTVSKVKNWSHFCP*WGWLAW
Trigger: CCAGGCGAGCCAGCCCCACCATGGGCAGAAATGAGA...CCAATTCTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp GTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTTTGCAGGATGTGTGTaGCAAGGAGATCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VSKCCFIFRHERSSQYQKFAGCV*QGDRHC
Trigger: GCAGTGGCGATCTCCTTGTCACACACATCCTGCAAA...CTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp CTGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAACAGGCAGCTCCTGCTTaGAACTGGGAACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LCPNVALSFGTKDLHSIKQAAPA*NWELPL
Trigger: CAAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTG...TTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTTTCCCATCTCTCTGGTaGGTGGAGGATGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSFPSLW*VEDEVQ
Trigger: CTGCACCTCATCCTCCACCCACCAGAGAGATGGGAA...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTTTATACGCCTTCAGCTaGCAGTCAGGGCCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSLYAFS*QSGPQD
Trigger: GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAA...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp CTGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAATGTAACGTGTGGTTCTaGGGGGAGCCCAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LCPNVALSFGTKDLHSIKCNVWF*GEPKVK
Trigger: TTTGACTTTGGGCTCCCCTCAGAACCACACGTTACA...TTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CCA 90 bp GCCTTCATCACTCCCAAGCGTTCACTTCTCTGGGATTACACACGTATACATACTAAGCGTTCACTTCTCTaGGATTACACACGTATACAT +
Preference number: 4 (lower is better)
Translates to: AFITPKRSLLWDYTRIHTKRSLL*DYTRIH
Trigger: ATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTT...AGTATGTATACGTGTGTAATCCCAGAGAAGTGAACGCTTGGGAGTGATGAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CCA 90 bp TTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGAATTGGCAAAGAGAGCAGTGTTaGGCCAGCAGTACCATCAGC +
Preference number: 4 (lower is better)
Translates to: LLYLSARKIFTVSKVKNWQREQC*ASSTIS
Trigger: GCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTG...CCAATTCTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGAATTGGAGTTTCGCCAGGAGCTaGCCTTCTCCTTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LLYLSARKIFTVSKVKNWSFARS*PSPSQF
Trigger: AAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACT...CCAATTCTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR GCA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTTGTTCTCGACCTGTCTaGCTTTCATCTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSCSRPV*LSSSSM
Trigger: CATGGAGGAAGATGAAAGGCAGACAGGTCGAGAACA...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR GCA 90 bp TTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGAATTGGGTGTTTTTGATCTCCTaGAGACGGCTGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLYLSARKIFTVSKVKNWVFLIS*RRLLRK
Trigger: CTTCCTGAGCAGCCGTCTGCAGGAGATCAAAAACAC...CCAATTCTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR TCA 90 bp CAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGTTCACAGCAACTTTCTaGCGAGTCTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: QMLLYLSARKIFTVSKVKFTATF*RVCFAE
Trigger: TTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAA...CTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS CCA 90 bp GGGCCGGGCACCAGGTTGGGTTCGTCATCCTCCCTGGGGCCGTCGTaGTCGGGCTCCGCCGGCGCCTCCGGAGGGCCTGCACCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: GPGTRLGSSSSLGPS*SGSAGASGGPAPAP
Trigger: GGGAGCGGGTGCAGGCCCTCCGGAGGCGCCGGCGGAGCCCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507587.1
ENST00000508298.5
ENST00000514747.6
CDS CCA 90 bp GCAGGCGCTGCGGGCCGGGCACCAGGTTGGGTTCGTCATCCTCCCTaGGGCCGTCGTGGTCGGGCTCCGCCGGCGCCTCCGGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: AGAAGRAPGWVRHPP*GRRGRAPPAPPEGL
Trigger: CAGGCCCTCCGGAGGCGCCGGCGGAGCCCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGCGCCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507587.1
CDS CCA 90 bp GGGGGACCTGCGGGCCGGGCACCAGGTTGGGTTCGTCATCCTCCCTaGGGCCGTCGTGGTCGGGCTCCGCCGGCGCCTCCGGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GGPAGRAPGWVRHPP*GRRGRAPPAPPEGL
Trigger: CAGGCCCTCCGGAGGCGCCGGCGGAGCCCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGTCCCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514747.6
CDS CCA 90 bp CTCCTACCTGCGGGCCGGGCACCAGGTTGGGTTCGTCATCCTCCCTaGGGCCGTCGTGGTCGGGCTCCGCCGGCGCCTCCGGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LLPAGRAPGWVRHPP*GRRGRAPPAPPEGL
Trigger: CAGGCCCTCCGGAGGCGCCGGCGGAGCCCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGTAGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS CCA 90 bp TTCTGCCCTGCGGGCCGGGCACCAGGTTGGGTTCGTCATCCTCCCTaGGGCCGTCGTGGTCGGGCTCCGCCGGCGCCTCCGGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: FCPAGRAPGWVRHPP*GRRGRAPPAPPEGL
Trigger: CAGGCCCTCCGGAGGCGCCGGCGGAGCCCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGGCAGAA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508298.5
CDS CCA 90 bp CCGAAGTCTCCCCGCTCGCTCCTACCTGCGGGCCGGGCACCAGGTTaGGTTCGTCATCCTCCCTGGGGCCGTCGTGGTCGGGCTCCGCCG +
Preference number: 5 (lower is better)
Translates to: PKSPRSLLPAGRAPG*VRHPPWGRRGRAPP
Trigger: CGGCGGAGCCCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGTAGGAGCGAGCGGGGAGACTTCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp CATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTCGGCGGCTGCGGCCCTaGCCCTGGGGCAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: HQPWPLGQPSPRALSVEARRLRP*PWGKLC
Trigger: ACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCG...AGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCATTGTGCCGGGCCCGCTaGGCGGCCCTGGCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GWSRMVGSTEGLGRVGGALCRAR*AALALL
Trigger: CAACAGCGCCAGGGCCGCCAAGCGGGCCCGGCACAA...TGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGAACCCTGCCTGGCTGCTaGGGGCCAGCGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGTLPGC*GPATWP
Trigger: GGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGT...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS GCA 90 bp ATCTGCCTCGCAGGGCTGGGGCAGCTGGCAAGCCAGGCCACTGTGTaGAAACTTGTGCCCCTTGCACCCGGGATCCCTGGCCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: ICLAGLGQLASQATV*KLVPLAPGIPGLGL
Trigger: CAGGCCCAGGCCAGGGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTGCGAGGCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508298.5
CDS-3UTR CAA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGAGGCTTCTCCTGCTTGTaGCGGCTCCGGCGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGGFSCL*RLRRLR
Trigger: CCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCC...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TACCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGGCTTCTCCTGCTTGTaGCGGCTCCGGCGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: YHQPWPLGQPSPRALSVEGFSCL*RLRRLR
Trigger: CCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCC...CTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GTTGACCCGATCCAGTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGGCTGGCTTCTCCTGCTaGTTGCGGCTCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: VDPIQFPVGPLQEPLPGRAGFSC*LRLRRL
Trigger: CAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGC...CCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAACTGGATCGGGTCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGGCTGGCTTCTCCTGCTaGTTGCGGCTCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGAGFSC*LRLRRL
Trigger: CAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGC...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGAGGTTGGGCACGGTGTaGAGTCTCCTCACGAGCCCG +
Preference number: 5 (lower is better)
Translates to: QPWPLGQPSPRALSVEAARLGTV*SLLTSP
Trigger: CGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCT...CGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CTGAGGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCCCCGGCTTGGGTGTCTaGACCCAGATCACCCGGGAT +
Preference number: 5 (lower is better)
Translates to: LRAAQTPAPEAVPWPRLAPGLGV*TQITRD
Trigger: ATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGGG...GGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GCCTCCCAGAGTCCCCTGCTGCCCGATGCAGTGTCTGCAGAGCCAAACGCATCTGGCTTCTCCTGCTTGTaGCGGCTCCGGCGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: ASQSPLLPDAVSAEPNASGFSCL*RLRRLR
Trigger: CCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCC...AGATGCGTTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGACTCTGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp GGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAAGGCTTCTCCTGCTTGTaGCGGCTCCGGCGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: GGEHRGSWTGRWGTRREKGFSCL*RLRRLR
Trigger: CCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCC...TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CCCGATGCAGTGTCTGCAGAGCCAAACGCATCTTCCGCCACGCCTCATCCTCATTTGTGCCGGGCCCGCTaGGCGGCCCTGGCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PDAVSAEPNASSATPHPHLCRAR*AALALL
Trigger: CAACAGCGCCAGGGCCGCCAAGCGGGCCCGGCACAA...ATGAGGATGAGGCGTGGCGGAAGATGCGTTTGGCTCTGCAGACACTGCATCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp GTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGTTGGGCACGGTGTaGAGTCTCCTCACGAGCCCG +
Preference number: 5 (lower is better)
Translates to: VQDGGEHRGSWTGRWGTRRLGTV*SLLTSP
Trigger: CGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCT...CCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGAGGTTGGGCACGGTGTaGAGTCTCCTCACGAGCCCG +
Preference number: 5 (lower is better)
Translates to: QDGGEHRGSWTGRWGTRRRLGTV*SLLTSP
Trigger: CGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCT...CCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGAAGCCCCGGCTTGGGTGTCTaGACCCAGATCACCCGGGAT +
Preference number: 5 (lower is better)
Translates to: RPAQSTGSECGGCVAPGSPGLGV*TQITRD
Trigger: ATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGGG...GCTTCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGACCCTGCCTGGCTGCTaGGGGCCAGCGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: SFWLVQDGGEHRGSWTGRTLPGC*GPATWP
Trigger: GGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGT...CCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGCGGCGGCTGCGGCCCTaGCCCTGGGGCAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: WTGRWGTRREKLYAFSWQRRLRP*PWGKLC
Trigger: ACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCG...CTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGGCGGCTGCGGCCCTaGCCCTGGGGCAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGRRLRP*PWGKLC
Trigger: ACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCG...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGGGCTTCTCCTGCTTGTaGCGGCTCCGGCGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: VWHPFSFWLVQDGGEHRGGFSCL*RLRRLR
Trigger: CCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCC...CCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGGTGGGCTGCCTTGCGGAGGCTGGCTTCTCCTGCTaGTTGCGGCTCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SRILQTWDLKVGVGCLAEAGFSC*LRLRRL
Trigger: CAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGC...CTCCGCAAGGCAGCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp GTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGCCACTGTGTGCAAACTaGTGCCCCTTGCACCCGGGA +
Preference number: 5 (lower is better)
Translates to: VQDGGEHRGSWTGRWGTRPLCAN*CPLHPG
Trigger: TCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGG...CCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CAA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGCCACTGTGTGCAAACTaGTGCCCCTTGCACCCGGGA +
Preference number: 5 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGPLCAN*CPLHPG
Trigger: TCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGG...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CAA 90 bp GTTCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTGGGCTCCGTGCTGTaGATGAATTCCAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: VPGRATPRASPWQALAPGLGSVL*MNSSSS
Trigger: TGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAA...GCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGGCGCTGTTGGGGACTTaGGGCTCCGTGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGALLGT*GSVLLM
Trigger: CATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGC...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp CCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGCCAGCCCAGCGGCCCTGGCGCTGTaGGGGACTTTGGGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: PVSPGAALLLLSFGTASPAALAL*GTLGSV
Trigger: CACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC...TGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp CAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGCTGCTCAGGAAGCTGTaGACCCGATCCAGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: QDGGEHRGSWTGRWGTRRLLRKL*TRSSSR
Trigger: CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAG...CCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGCATGCCCTCTGATCTGAGCCTCCTTCCTGGCGCCGTCTGTGCTCACGGCCTGAGGTTGGGCACGGTGTaGAGTCTCCTCACGAGCCCG +
Preference number: 5 (lower is better)
Translates to: SMPSDLSLLPGAVCAHGLRLGTV*SLLTSP
Trigger: CGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCT...CAGGCCGTGAGCACAGACGGCGCCAGGAAGGAGGCTCAGATCAGAGGGCATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CAA 90 bp CCAGGAAGCGGCTCTGCTGAGGTCAAGGGGCCCCAGCACAGTGTGGCATCCGTTCCCGGCTTGGGTGTCTaGACCCAGATCACCCGGGAT +
Preference number: 5 (lower is better)
Translates to: PGSGSAEVKGPQHSVASVPGLGV*TQITRD
Trigger: ATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGGG...AACGGATGCCACACTGTGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TACCATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGCCCGGCTTGGGTGTCTaGACCCAGATCACCCGGGAT +
Preference number: 5 (lower is better)
Translates to: YHQPWPLGQPSPRALSVEPGLGV*TQITRD
Trigger: ATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGGG...CTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGCCAGCGACCTGGCCCTaGGCACTGGGAACCTCTAGG +
Preference number: 5 (lower is better)
Translates to: SPLSMVGGGLSFLPMVGLPATWP*ALGTSR
Trigger: CCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTGG...CAGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAACCCTGCCTGGCTGCTaGGGGCCAGCGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VGHTEGKIIRLQLAVRASTLPGC*GPATWP
Trigger: GGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGT...TGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACACCCTGCCTGGCTGCTaGGGGCCAGCGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: GTRREKLYAFSWQSGPQDTLPGC*GPATWP
Trigger: GGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGT...GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCCGGCGGCTGCGGCCCTaGCCCTGGGGCAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFRRLRP*PWGKLC
Trigger: ACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCG...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGAGGCTTCTCCTGCTTGTaGCGGCTCCGGCGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGGFSCL*RLRRLR
Trigger: CCGCAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCC...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCAACCCCGTCCATGTCCTaGGGCAGGAACACATCGTCC +
Preference number: 5 (lower is better)
Translates to: GWSRMVGSTEGLGRVGGATPSMS*GRNTSS
Trigger: GGACGATGTGTTCCTGCCCAAGGACATGGACGGGGT...TGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGAACCCCGTCCATGTCCTaGGGCAGGAACACATCGTCC +
Preference number: 5 (lower is better)
Translates to: LRPAQSTGSECGGCVAPGTPSMS*GRNTSS
Trigger: GGACGATGTGTTCCTGCCCAAGGACATGGACGGGGT...TCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CATCAGCCCTGGCCCTTAGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTCGGGGTTTCACCAACTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: HQPWPLGQPSPRALSVEARGFTN*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGTTGGTGAAACCCCG...AGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCTAAGGGCCAGGGCTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513282.5
CDS-3UTR CAA 90 bp GGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTCCAGAAACCCGTTCAGCTTTTGGTaGGTCCAGGATGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: GPLQEPLPGRPWLPASRNPFSFW*VQDGGE
Trigger: CTCCCCACCATCCTGGACCAACCAAAAGCTGAACGG...GTTTCTGGAAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp CAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGCCGTTCAGCTTTTGGTaGGTCCAGGATGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: QDGGEHRGSWTGRWGTRRPFSFW*VQDGGE
Trigger: CTCCCCACCATCCTGGACCAACCAAAAGCTGAACGG...CCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGCCGTTCAGCTTTTGGTaGGTCCAGGATGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: VQDGGEHRGSWTGRWGTRPFSFW*VQDGGE
Trigger: CTCCCCACCATCCTGGACCAACCAAAAGCTGAACGG...CCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAGGCCAGGGCCGGGCACCAGGTaGGGTTCGTCATCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: HKESSVGPAVPSALALRPGPGTR*GSSSSL
Trigger: CAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCC...TGGCCTAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CAA 90 bp CCAGTTTCGCCAGGAGCTGCCCTTCTCCTTCTCAGTTTTGGGACTGCCAGCCCAGACCGAGCCTCGGCTTaGGGGAGAGGGGTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PVSPGAALLLLSFGTASPDRASA*GRGVQP
Trigger: AGGCTGGACCCCTCTCCCCAAAGCCGAGGCTCGGTC...TGGGCTGGCAGTCCCAAAACTGAGAAGGAGAAGGGCAGCTCCTGGCGAAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp GGCGCCGTCTGTGCTCACGGCCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACGGCAAGCTGGAAGCTTaGGGGAATCCTCCTACTGTT +
Preference number: 5 (lower is better)
Translates to: GAVCAHGLSLGWLSHLGDGKLEA*GNPPTV
Trigger: AACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGCC...GTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGGCCGTGAGCACAGACGGCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCGCGGCCCTGGCGCTGTaGGGGACTTTGGGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGAALAL*GTLGSV
Trigger: CACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGTTGTGCCGGGCCCGCTaGGCGGCCCTGGCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWLCRAR*AALALL
Trigger: CAACAGCGCCAGGGCCGCCAAGCGGGCCCGGCACAA...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACTTGTGCCGGGCCCGCTaGGCGGCCCTGGCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYLCRAR*AALALL
Trigger: CAACAGCGCCAGGGCCGCCAAGCGGGCCCGGCACAA...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp TGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACCTGCTCAGGAAGCTGTaGACCCGATCCAGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: WSRMVGSTEGLGRVGGAHLLRKL*TRSSSR
Trigger: CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAG...GTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGCACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGGGGACAGGTCAAGGTaGATGTCAGGCTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GTVLSLLTSPFSGTIPGGGDRSR*MSGCCS
Trigger: AGAGCAGCAGCCTGACATCAACCTTGACCTGTCCCC...CCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp ACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGGGCGAACTTCCTTTGAGCTaGGCTCCTCGGAGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: TVLSLLTSPFSGTIPGGGELPLS*APRSWG
Trigger: ACCCCAGCTCCGAGGAGCCAAGCTCAAAGGAAGTTC...GCCCCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GCGGAGCTTCTCCCGGATCTCGGTATAGTTCCGACTCGTCGGGGCAGCGGGTGGGCATCCGTTCAGCTTTaGGTTGGTCCAGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: AELLPDLGIVPTRRGSGWASVQL*VGPGWW
Trigger: CCACCATCCTGGACCAACCAAAAGCTGAACGGATGC...CCACCCGCTGCCCCGACGAGTCGGAACTATACCGAGATCCGGGAGAAGCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp CTGAGGGCTGCACAGACTCCTGCTCCTGAGGCCGTGCCTTGGCCTCGCCTGGCCGGACTGAGAGCCTTTTaGCTTCCACTCTGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LRAAQTPAPEAVPWPRLAGLRAF*LPLCLH
Trigger: ATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCC...GGCCAGGCGAGGCCAAGGCACGGCCTCAGGAGCAGGAGTCTGTGCAGCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp CACCCAGCCCCGAGTGCCACAACCCTCCCAGAGCAACCGTGGCCCATGTCACCCTTGGGCTCCGTGCTGTaGATGAATTCCAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: HPAPSATTLPEQPWPMSPLGSVL*MNSSSS
Trigger: TGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAA...GGGTGACATGGGCCACGGTTGCTCTGGGAGGGTTGTGGCACTCGGGGCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp GGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCAGGGGACAGGTCAAGGTaGATGTCAGGCTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GWSRMVGSTEGLGRVGGAGDRSR*MSGCCS
Trigger: AGAGCAGCAGCCTGACATCAACCTTGACCTGTCCCC...TGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCAATCACCCGGGATAGGTaGGGCACGGTGTTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: GWSRMVGSTEGLGRVGGAITRDR*GTVLSL
Trigger: GAGACTCAACACCGTGCCCAACCTATCCCGGGTGAT...TGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGCACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGGAGGGTTCTCCTTCTCAGTTTaGGGACTGCCAGCCCAACCT +
Preference number: 5 (lower is better)
Translates to: GTVLSLLTSPFSGTIPGGFSFSV*GLPAQP
Trigger: AGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGAA...CCCTCCCGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp CCTCGGGATCACAGCCCAGTCCCAGTCCCAGTCCCAGTGTGGGTGTACGGCCGGTTTCCTTTTGCCGCATaGTGGCCGAAGAACTCACAG +
Preference number: 5 (lower is better)
Translates to: PRDHSPVPVPVPVWVYGRFPFAA*WPKNSQ
Trigger: CTGTGAGTTCTTCGGCCACAATGCGGCAAAAGGAAA...CCGGCCGTACACCCACACTGGGACTGGGACTGGGACTGGGCTGTGATCCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp TCCCGGTCGGGCCACTCCAAGAGCCTCTCCCTGGCAGGCCTTGGCTCCCGGCTTGCACGGATGGAGTCTTaGACAGTGTTTTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: SRSGHSKSLSLAGLGSRLARMES*TVFLIS
Trigger: GGAGATCAAAAACACTGTCAAAGACTCCATCCGTGC...AAGCCGGGAGCCAAGGCCTGCCAGGGAGAGGCTCTTGGAGTGGCCCGACCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCCAGCGACCTGGCCCTaGGCACTGGGAACCTCTAGG +
Preference number: 5 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSPATWP*ALGTSR
Trigger: CCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTGG...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTCCAGCGACCTGGCCCTaGGCACTGGGAACCTCTAGG +
Preference number: 5 (lower is better)
Translates to: WHPFSFWLVQDGGEHRGSPATWP*ALGTSR
Trigger: CCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTGG...AGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGGTTGGGCACGGTGTTGAGTCTCCTCACGAGCCCGTTCTCGGGGACGATACCGGCACAGCTGCCTACTTaGGGAAGCTCTAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: RLGTVLSLLTSPFSGTIPAQLPT*GSSRTL
Trigger: CAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTGC...CGGTATCGTCCCCGAGAACGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAAGCACAGCTGCCTACTTaGGGAAGCTCTAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: GGEHRGSWTGRWGTRREKAQLPT*GSSRTL
Trigger: CAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTGC...TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGCAGCGGGTGGCGCATaGTGGCCGAAGAACTCACAG +
Preference number: 5 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGAAGGA*WPKNSQ
Trigger: CTGTGAGTTCTTCGGCCACAATGCGCCACCCGCTGC...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524677.5
CDS GCA 90 bp CAAAGTAGGTGCTCAATACCCGTTAGTTTCTTTCCTCTTCTGCCCTaGGGGCCGGGCACCAGGTTGGGTTCGTCATCCTCCCTGGGGCCG +
Preference number: 5 (lower is better)
Translates to: QSRCSIPVSFFPLLP*GPGTRLGSSSSLGP
Trigger: CGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGGCAGAAGAGGAAAGAAACTAACGGGTATTGAGCACCTACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508298.5
CDS-3UTR CAA 90 bp CTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGCGGCGGCTGCGGCCCTaGCCCTGGGGCAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LCSKESDLLPGGKLEALGRRLRP*PWGKLC
Trigger: ACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCG...CCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp GGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCACCCCGTCCATGTCCTaGGGCAGGAACACATCGTCC +
Preference number: 5 (lower is better)
Translates to: GGAHGGKNYTPSAGSQGLTPSMS*GRNTSS
Trigger: GGACGATGTGTTCCTGCCCAAGGACATGGACGGGGT...GAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TCGCAGGGCTGGGGCAGCTGGCAAGCCAGGCCACTGTGTGCAAACTTGTGCCCCCCATTTCCTTTCCTTTaGCCGCATTGTGGCCGAAGA +
Preference number: 5 (lower is better)
Translates to: SQGWGSWQARPLCANLCPPFPFL*PHCGRR
Trigger: TCTTCGGCCACAATGCGGCAAAAGGAAAGGAAATGG...GGGGCACAAGTTTGCACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTGCGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CAA 90 bp AGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGGGACTGAGAGCCTTTTaGCTTCCACTCTGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: RMVGSTEGLGRVGGAHGGGLRAF*LPLCLH
Trigger: ATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCC...CCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GTCTTGACCCAGATCACCCGGGATAGGTTGGGCACGGTGTTGAGTCTCCTCACGGCGCTGTTGGGGACTTaGGGCTCCGTGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: VLTQITRDRLGTVLSLLTALLGT*GSVLLM
Trigger: CATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGC...CGTGAGGAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp AGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGCTGCTCAGGAAGCTGTaGACCCGATCCAGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: SFWLVQDGGEHRGSWTGRLLRKL*TRSSSR
Trigger: CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAG...CCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGTTGGGCACGGTGTaGAGTCTCCTCACGAGCCCG +
Preference number: 5 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQRLGTV*SLLTSP
Trigger: CGGGCTCGTGAGGAGACTCAACACCGTGCCCAACCT...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACCCAGCGACCTGGCCCTaGGCACTGGGAACCTCTAGG +
Preference number: 5 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYPATWP*ALGTSR
Trigger: CCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTGG...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CCTCCCGTTATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCACCCTGCCTGGCTGCTaGGGGCCAGCGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: PPVISFAQKKVTFFQVASTLPGC*GPATWP
Trigger: GGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGT...GCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAACGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp AGGCCAGCCCAGTCCACGGGCTCTGAGTGTGGAGGCTGCGTAGCACCAGGAAGCTTCTCCTTTTCCGCATaGTGGCCGAAGAACTCACAG +
Preference number: 5 (lower is better)
Translates to: RPAQSTGSECGGCVAPGSFSFSA*WPKNSQ
Trigger: CTGTGAGTTCTTCGGCCACAATGCGGAAAAGGAGAA...GCTTCCTGGTGCTACGCAGCCTCCACACTCAGAGCCCGTGGACTGGGCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514747.6
CDS-3UTR CAA 90 bp CTCACACACACTGAAGCTGGCACGGATGGAGTCTTTGACAGTGTTTTTGATCTCCGGCGGCTGCGGCCCTaGCCCTGGGGCAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LTHTEAGTDGVFDSVFDLRRLRP*PWGKLC
Trigger: ACAGAGCTTGCCCCAGGGCAAGGGCCGCAGCCGCCG...GAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAGTGTGTGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp CAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGACCCCGTCCATGTCCTaGGGCAGGAACACATCGTCC +
Preference number: 5 (lower is better)
Translates to: QCGIRSAFGWSRMVGSTETPSMS*GRNTSS
Trigger: GGACGATGTGTTCCTGCCCAAGGACATGGACGGGGT...CTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GTCCCCTGCTGCCCGATGCAGTGTCTGCAGAGCCAAACGCATCTTCCGCCACGCCCATTTCCTTTCCTTTaGCCGCATTGTGGCCGAAGA +
Preference number: 5 (lower is better)
Translates to: VPCCPMQCLQSQTHLPPRPFPFL*PHCGRR
Trigger: TCTTCGGCCACAATGCGGCAAAAGGAAAGGAAATGG...GCGTGGCGGAAGATGCGTTTGGCTCTGCAGACACTGCATCGGGCAGCAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp GGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCCCGTTCAGCTTTTGGTaGGTCCAGGATGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: GGAHGGKNYTPSAGSQGLPFSFW*VQDGGE
Trigger: CTCCCCACCATCCTGGACCAACCAAAAGCTGAACGG...GAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TTCTCGACCTGTCTGCCTTTCATCTTCCTCCATGCTCTTTCGGCAACTCTGGCAGGGCCGGGCACCAGGTaGGGTTCGTCATCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: FSTCLPFIFLHALSATLAGPGTR*GSSSSL
Trigger: CAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCC...TGCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAAGGCAGACAGGTCGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CAA 90 bp AGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGCCACTGTGTGCAAACTaGTGCCCCTTGCACCCGGGA +
Preference number: 5 (lower is better)
Translates to: SVASVQLLVGPGWWGAQRPLCAN*CPLHPG
Trigger: TCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGG...CCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CAA 90 bp CACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGCCACTGTGTGCAAACTaGTGCCCCTTGCACCCGGGA +
Preference number: 5 (lower is better)
Translates to: HSVASVQLLVGPGWWGAQPLCAN*CPLHPG
Trigger: TCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGG...CTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CAA 90 bp GCGGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTTGATGAATTCCAGCTTGGGCTCCGTGCTGTaGATGAATTCCAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: AALALLGTLGSVLLMNSSLGSVL*MNSSSS
Trigger: TGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAA...GCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTGCGCTGTTGGGGACTTaGGGCTCCGTGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSALLGT*GSVLLM
Trigger: CATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGC...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp CTCCTGCAGGAGCCTGCCTTCCTGGGCAGGCTCAGCCAAAAGACCAACTCAAAATCCTTCTTTTTCAGCTaGTGCCGGGCCCGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LLQEPAFLGRLSQKTNSKSFFFS*CRARLA
Trigger: CGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAAGGA...TTTTGAGTTGGTCTTTTGGCTGAGCCTGCCCAGGAAGGCAGGCTCCTGCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACATCCTTCTTTTTCAGCTaGTGCCGGGCCCGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTSFFFS*CRARLA
Trigger: CGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAAGGA...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGATCCTTCTTTTTCAGCTaGTGCCGGGCCCGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGSFFFS*CRARLA
Trigger: CGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAAGGA...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp CCAGGAAGCGGCTCTGCTGAGGTCAAGGGGCCCCAGCACAGTGTGGCATCCGTTTCCTTAGAGAAGCCATaGCTGTCCATGCTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: PGSGSAEVKGPQHSVASVSLEKP*LSMLSS
Trigger: TGAGCTCAGCATGGACAGCAATGGCTTCTCTAAGGA...AACGGATGCCACACTGTGCTGGGGCCCCTTGACCTCAGCAGAGCCGCTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTATCACCCGGGATAGGTaGGGCACGGTGTTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGITRDR*GTVLSL
Trigger: GAGACTCAACACCGTGCCCAACCTATCCCGGGTGAT...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATCAGGCAGCTCCTGCTaGCAACTGGGAACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: GGEHRGSWTGRWGTRREKSGSSC*QLGTSF
Trigger: AAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGA...TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCGCACAGCTGCCTACTTaGGGAAGCTCTAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: GGAHGGKNYTPSAGSQGLAQLPT*GSSRTL
Trigger: CAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTGC...GAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACGCTGGCTTCTCCTGCTaGTTGCGGCTCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SCARSGFLEAEVGPVHSNAGFSC*LRLRRL
Trigger: CAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGC...GTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAACCCCGTCCATGTCCTaGGGCAGGAACACATCGTCC +
Preference number: 5 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSTPSMS*GRNTSS
Trigger: GGACGATGTGTTCCTGCCCAAGGACATGGACGGGGT...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACCCGTTCAGCTTTTGGTaGGTCCAGGATGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: GTRREKLYAFSWQSGPQDPFSFW*VQDGGE
Trigger: CTCCCCACCATCCTGGACCAACCAAAAGCTGAACGG...GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGCATCCGTTCAGCTTTaGGTTGGTCCAGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGASVQL*VGPGWW
Trigger: CCACCATCCTGGACCAACCAAAAGCTGAACGGATGC...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGCATCCGTTCAGCTTTaGGTTGGTCCAGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRASVQL*VGPGWW
Trigger: CCACCATCCTGGACCAACCAAAAGCTGAACGGATGC...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATCGCCTAGGAGATTCTaGACGAGCTTTGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: GGEHRGSWTGRWGTRREKSPRRF*TSFGMK
Trigger: CTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGA...TTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CAA 90 bp AGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGGCGGCCCTGGCGCTGTaGGGGACTTTGGGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: RSGFLEAEVGPVHSNFLTAALAL*GTLGSV
Trigger: CACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC...CGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCACTGCTCAGGAAGCTGTaGACCCGATCCAGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSLLRKL*TRSSSR
Trigger: CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAG...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp ACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCACTGCTCAGGAAGCTGTaGACCCGATCCAGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: TGRWGTRREKLYAFSWQSLLRKL*TRSSSR
Trigger: CCGGGAACTGGATCGGGTCAACAGCTTCCTGAGCAG...TGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTGGGGACAGGTCAAGGTaGATGTCAGGCTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSGDRSR*MSGCCS
Trigger: AGAGCAGCAGCCTGACATCAACCTTGACCTGTCCCC...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TTGGGTGTCTTGACCCAGATCACCCGGGATAGGTTGGGCACGGTGTTGAGTCTCATCACCCGGGATAGGTaGGGCACGGTGTTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: LGVLTQITRDRLGTVLSLITRDR*GTVLSL
Trigger: GAGACTCAACACCGTGCCCAACCTATCCCGGGTGAT...GAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGACACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCATCACCCGGGATAGGTaGGGCACGGTGTTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSITRDR*GTVLSL
Trigger: GAGACTCAACACCGTGCCCAACCTATCCCGGGTGAT...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAATCACCCGGGATAGGTaGGGCACGGTGTTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTITRDR*GTVLSL
Trigger: GAGACTCAACACCGTGCCCAACCTATCCCGGGTGAT...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTGAACTTCCTTTGAGCTaGGCTCCTCGGAGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSELPLS*APRSWG
Trigger: ACCCCAGCTCCGAGGAGCCAAGCTCAAAGGAAGTTC...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTGCAGAATCCAAACAGAACCCTGCCTGGCTGCTaGGGGCCAGCGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: WSSSQQLSDESALQNPNRTLPGC*GPATWP
Trigger: GGGCCAGGTCGCTGGCCCCAAGCAGCCAGGCAGGGT...TCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTGCACAGCTGCCTACTTaGGGAAGCTCTAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: GRVGGAHGGKNYTPSAGSAQLPT*GSSRTL
Trigger: CAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTGC...ACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS CCA 90 bp GAAGCAAGACAACTGTTCTCTCTACCATTAGCCACCAAGGCCACATaGCTTCACCCTCTCAGCCAGGCTGAATCCAGGCGGCAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: EARQLFSLPLATKAT*LHPLSQAESRRQWV
Trigger: CACCCACTGCCGCCTGGATTCAGCCTGGCTGAGAGGGTGAAGCCATGTGGCCTTGGTGGCTAATGGTAGAGAGAACAGTTGTCTTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513502.1
CDS-3UTR CAA 90 bp GGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGAGTCTGGCTGGCTTCTCCTGCTaGTTGCGGCTCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: GFLEAEVGPVHSNFLTSLAGFSC*LRLRRL
Trigger: CAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGC...CAGACTCGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCCGGGGTTTCACCAACTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFRGFTN*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGTTGGTGAAACCCCG...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507212.1
ENST00000513282.5
CDS-3UTR CAA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCACCGTTCAGCTTTTGGTaGGTCCAGGATGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSPFSFW*VQDGGE
Trigger: CTCCCCACCATCCTGGACCAACCAAAAGCTGAACGG...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTGCATCCGTTCAGCTTTaGGTTGGTCCAGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPASVQL*VGPGWW
Trigger: CCACCATCCTGGACCAACCAAAAGCTGAACGGATGC...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TCACCTCTGTCCATGGTGGGTGGGGGCCTCTCATTTCTGCCCATGGTGGGGCTGCCACAAGACTGTGATTaGCAGGATGTGTGTGACAAG +
Preference number: 5 (lower is better)
Translates to: SPLSMVGGGLSFLPMVGLPQDCD*QDVCDK
Trigger: CTTGTCACACACATCCTGCAAATCACAGTCTTGTGG...CAGCCCCACCATGGGCAGAAATGAGAGGCCCCCACCCACCATGGACAGAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTGGGGACAGGTCAAGGTaGATGTCAGGCTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GRASLSCARSGFLEAEVGGDRSR*MSGCCS
Trigger: AGAGCAGCAGCCTGACATCAACCTTGACCTGTCCCC...ACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp CCTGCAACACCAGTCCATTTTGAGAAGGGCCTTCTTCCCAGCCTTTGCGTTCCCGAACTTCCTTTGAGCTaGGCTCCTCGGAGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: PATPVHFEKGLLPSLCVPELPLS*APRSWG
Trigger: ACCCCAGCTCCGAGGAGCCAAGCTCAAAGGAAGTTC...GGGAACGCAAAGGCTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp CGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGTCAGGCAGCTCCTGCTaGCAACTGGGAACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: RSAFGWSRMVGSTEGLGRSGSSC*QLGTSF
Trigger: AAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGA...CCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGGCACAGCTGCCTACTTaGGGAAGCTCTAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWAQLPT*GSSRTL
Trigger: CAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTGC...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTCGTTCACTTCTCGCATaGTGGCCGAAGAACTCACAG +
Preference number: 5 (lower is better)
Translates to: AFGWSRMVGSTEGLGRVGRSLLA*WPKNSQ
Trigger: CTGTGAGTTCTTCGGCCACAATGCGAGAAGTGAACG...ACCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510163.5
CDS-3UTR CAA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTTTCTCCTTCTCAGTTTaGGGACTGCCAGCCCAACCT +
Preference number: 5 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPFSFSV*GLPAQP
Trigger: AGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGAA...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CCAGCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCCTAGGAGTGGTTTTCTaGAGGCTGAAGTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: PAQCGIRSAFGWSRMVGSLGVVF*RLKLVQ
Trigger: CTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAG...GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp ACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTGCATCCGTTCAGCTTTaGGTTGGTCCAGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: TEGLGRVGGAHGGKNYTPASVQL*VGPGWW
Trigger: CCACCATCCTGGACCAACCAAAAGCTGAACGGATGC...AGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GAGCACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCATCCGTTCAGCTTTaGGTTGGTCCAGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: EHRGSWTGRWGTRREKLYASVQL*VGPGWW
Trigger: CCACCATCCTGGACCAACCAAAAGCTGAACGGATGC...GTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CTCCGTGCTGTTGATGAATTCCAGCAGCTCATCCACATCTCGGTGGTCCACGGCACAAAGAGAGCAGTGTaGGGCCAGCAGTACCATCAG +
Preference number: 5 (lower is better)
Translates to: LRAVDEFQQLIHISVVHGTKRAV*GQQYHQ
Trigger: CTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGT...GCCGTGGACCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGACAAAGAGAGCAGTGTaGGGCCAGCAGTACCATCAG +
Preference number: 5 (lower is better)
Translates to: GRWGTRREKLYAFSWQSGTKRAV*GQQYHQ
Trigger: CTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGT...CCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTACAAAGAGAGCAGTGTaGGGCCAGCAGTACCATCAG +
Preference number: 5 (lower is better)
Translates to: WHPFSFWLVQDGGEHRGSTKRAV*GQQYHQ
Trigger: CTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGT...AGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAACAAAGAGAGCAGTGTaGGGCCAGCAGTACCATCAG +
Preference number: 5 (lower is better)
Translates to: VGHTEGKIIRLQLAVRASTKRAV*GQQYHQ
Trigger: CTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGT...TGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GTTATCTCCTTTGCTCAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGGGGCCGGGCACCAGGTaGGGTTCGTCATCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: VISFAQKKVTFFQVASWKGPGTR*GSSSSL
Trigger: CAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCC...CTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTGAGCAAAGGAGATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CAA 90 bp CTGTTGATGAATTCCAGCAGCTCATCCACATCTCGGTGGTCCACGGCGGGCTCCCAACACCAGTCCATTTaGAGAAGGGCCTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LLMNSSSSSTSRWSTAGSQHQSI*RRAFFP
Trigger: TGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTG...GGAGCCCGCCGTGGACCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp CTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTCGGGGTGGGCGGACTGAGAGCCTTTTaGCTTCCACTCTGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LFALSRILQTWDLKVGVGGLRAF*LPLCLH
Trigger: ATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCC...GCCCACCCCGACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp GGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACTTGGGCTCCGTGCTGTaGATGAATTCCAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GTRREKLYAFSWQSGPQDLGSVL*MNSSSS
Trigger: TGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAA...GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp GGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCTCCTTAGAGAAGCCATaGCTGTCCATGCTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GGAHGGKNYTPSAGSQGLSLEKP*LSMLSS
Trigger: TGAGCTCAGCATGGACAGCAATGGCTTCTCTAAGGA...GAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp ACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACGCCCTTCAGGCAGCTCCTGCTaGCAACTGGGAACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: TEGKIIRLQLAVRASGRPSGSSC*QLGTSF
Trigger: AAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGA...AGGGCGTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS GCA 90 bp GTGATACCTGACCCATCAGCCTGGGGCCCAGCTTTGCCACTAACTTaGTGGAAGCAAAGCCTTAAAATCCTAGCCTGCTTACCCACCCTG +
Preference number: 5 (lower is better)
Translates to: VIPDPSAWGPALPLT*WKQSLKILACLPTL
Trigger: CAGGGTGGGTAAGCAGGCTAGGATTTTAAGGCTTTGCTTCCAGCAAGTTAGTGGCAAAGCTGGGCCCCAGGCTGATGGGTCAGGTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505569.5
CDS GCA 90 bp CTGGCTGTCACACTTGGGGGACTGAGAGCCTTTTTGCTTCCACTCTaGCTTCATCACTCCCAAGCGTTCACTTCTCGCATTGTGGCCGAA +
Preference number: 5 (lower is better)
Translates to: LAVTLGGLRAFLLPL*LHHSQAFTSRIVAE
Trigger: TTCGGCCACAATGCGAGAAGTGAACGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510163.5
CDS CCA 90 bp ATACCTGACCCATCAGCCTGGGGCCCAGCTTTGCCACTAACTTGCTaGAAGCAAAGCCTTAAAATCCTAGCCTGCTTACCCACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: IPDPSAWGPALPLTC*KQSLKILACLPTLQ
Trigger: CTGCAGGGTGGGTAAGCAGGCTAGGATTTTAAGGCTTTGCTTCCAGCAAGTTAGTGGCAAAGCTGGGCCCCAGGCTGATGGGTCAGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505569.5
CDS-3UTR CAA 90 bp GGCAGGGCCTCACTGAGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTTTCTCCTTCTCAGTTTaGGGACTGCCAGCCCAACCT +
Preference number: 5 (lower is better)
Translates to: GRASLSCARSGFLEAEVGFSFSV*GLPAQP
Trigger: AGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGAA...ACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCTCAGTGAGGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp TCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGTTCTCCTTCTCAGTTTaGGGACTGCCAGCCCAACCT +
Preference number: 5 (lower is better)
Translates to: SWTGRWGTRREKLYAFSWFSFSV*GLPAQP
Trigger: AGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGAA...CCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp ACAGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTTCTCCTTCTCAGTTTaGGGACTGCCAGCCCAACCT +
Preference number: 5 (lower is better)
Translates to: TEGLGRVGGAHGGKNYTPFSFSV*GLPAQP
Trigger: AGGTTGGGCTGGCAGTCCCAAAACTGAGAAGGAGAA...AGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCTAGGAGTGGTTTTCTaGAGGCTGAAGTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPLGVVF*RLKLVQ
Trigger: CTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAG...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACTAGGAGTGGTTTTCTaGAGGCTGAAGTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GHTEGKIIRLQLAVRASGLGVVF*RLKLVQ
Trigger: CTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAG...TCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCCTAGGAGTGGTTTTCTaGAGGCTGAAGTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GSWTGRWGTRREKLYAFSLGVVF*RLKLVQ
Trigger: CTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAG...GCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp ACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTACAAAGAGAGCAGTGTaGGGCCAGCAGTACCATCAG +
Preference number: 5 (lower is better)
Translates to: TKHKESSVGPAVPSALALTKRAV*GQQYHQ
Trigger: CTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGT...AAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACACAACACCAGTCCATTTaGAGAAGGGCCTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: AQCGIRSAFGWSRMVGSTQHQSI*RRAFFP
Trigger: TGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTG...TGTGCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000514747.6
CDS-3UTR CAA 90 bp TTGGGTGTCTTGACCCAGATCACCCGGGATAGGTTGGGCACGGTGTTGAGTCTCTCGCCTAGGAGATTCTaGACGAGCTTTGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: LGVLTQITRDRLGTVLSLSPRRF*TSFGMK
Trigger: CTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGA...GAGACTCAACACCGTGCCCAACCTATCCCGGGTGATCTGGGTCAAGACACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CAA 90 bp GGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCCCACAAGACTGTGATTaGCAGGATGTGTGTGACAAG +
Preference number: 5 (lower is better)
Translates to: GGAHGGKNYTPSAGSQGLPQDCD*QDVCDK
Trigger: CTTGTCACACACATCCTGCAAATCACAGTCTTGTGG...GAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CAA 90 bp CACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTAGGCCATCTTTGACAGTGTTTTaGATCTCCTGCAGACGGCTG +
Preference number: 5 (lower is better)
Translates to: HKESSVGPAVPSALALRPSLTVF*ISCRRL
Trigger: CAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGA...TGGCCTAAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGCTTTTGGTTGGTCCAGGATGGTGGGGAGCACAGAGGGTCTTGGACGGGTAGGTCTTTGACAGTGTTTTaGATCTCCTGCAGACGGCTG +
Preference number: 5 (lower is better)
Translates to: SFWLVQDGGEHRGSWTGRSLTVF*ISCRRL
Trigger: CAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGA...CCTACCCGTCCAAGACCCTCTGTGCTCCCCACCATCCTGGACCAACCAAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCTCCTTAGAGAAGCCATaGCTGTCCATGCTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: LGRVGGAHGGKNYTPSAGSLEKP*LSMLSS
Trigger: TGAGCTCAGCATGGACAGCAATGGCTTCTCTAAGGA...GCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCATCCTTAGAGAAGCCATaGCTGTCCATGCTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: VGHTEGKIIRLQLAVRASSLEKP*LSMLSS
Trigger: TGAGCTCAGCATGGACAGCAATGGCTTCTCTAAGGA...TGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTCAGGACTCCTTAGAGAAGCCATaGCTGTCCATGCTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GTRREKLYAFSWQSGPQDSLEKP*LSMLSS
Trigger: TGAGCTCAGCATGGACAGCAATGGCTTCTCTAAGGA...GTCCTGAGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS CCA 90 bp AGGCTGTCAACTGCCAGGCACAATGTGATACCTGACCCATCAGCCTaGGGCCCAGCTTTGCCACTAACTTGCTGGAAGCAAAGCCTTAAA +
Preference number: 5 (lower is better)
Translates to: RLSTARHNVIPDPSA*GPALPLTCWKQSLK
Trigger: TTTAAGGCTTTGCTTCCAGCAAGTTAGTGGCAAAGCTGGGCCCCAGGCTGATGGGTCAGGTATCACATTGTGCCTGGCAGTTGACAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505569.5
CDS-3UTR CAA 90 bp GCTTCTCACCCTGCAACACCAGTCCATTTTGAGAAGGGCCTTCTTCCCAGCCTTGGCAAGCTGGAAGCTTaGGGGAATCCTCCTACTGTT +
Preference number: 5 (lower is better)
Translates to: ASHPATPVHFEKGLLPSLGKLEA*GNPPTV
Trigger: AACAGTAGGAGGATTCCCCAAAGCTTCCAGCTTGCC...AAGGCTGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTGCAGGGTGAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CAA 90 bp GCAGAATCCAAACAGAACCTCTTAAAGTACTCCACCTCTCGGTCAGTCTCATCCTCCTTCTTTTTCAGCTaGTGCCGGGCCCGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: AESKQNLLKYSTSRSVSSSFFFS*CRARLA
Trigger: CGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAAGGA...GGATGAGACTGACCGAGAGGTGGAGTACTTTAAGAGGTTCTGTTTGGATTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp CCAGCACAGTGTGGCATCCGTTCAGCTTTTGGTTGGTCCAGGATGGTGGGGAGCTTCCAGAAACACGATTaGCCTGCTTTAGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PAQCGIRSAFGWSRMVGSFQKHD*PALELL
Trigger: CAGAAGCTCTAAAGCAGGCAAATCGTGTTTCTGGAA...GCTCCCCACCATCCTGGACCAACCAAAAGCTGAACGGATGCCACACTGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGCCTTCTTTGACAGTGTTTTaGATCTCCTGCAGACGGCTG +
Preference number: 5 (lower is better)
Translates to: RWGTRREKLYAFSWQSGPSLTVF*ISCRRL
Trigger: CAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGA...AGGCCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCAGCTGGCAGTCAGGGTTCCAGAAACACGATTaGCCTGCTTTAGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: GRWGTRREKLYAFSWQSGFQKHD*PALELL
Trigger: CAGAAGCTCTAAAGCAGGCAAATCGTGTTTCTGGAA...CCCTGACTGCCAGCTGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp ACCAAACACAAAGAGAGCAGTGTTGGGCCAGCAGTACCATCAGCCCTGGCCCTTGCACGGATGGAGTCTTaGACAGTGTTTTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: TKHKESSVGPAVPSALALARMES*TVFLIS
Trigger: GGAGATCAAAAACACTGTCAAAGACTCCATCCGTGC...AAGGGCCAGGGCTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGTGTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp AGAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCGCACGGATGGAGTCTTaGACAGTGTTTTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: RGSWTGRWGTRREKLYAFARMES*TVFLIS
Trigger: GGAGATCAAAAACACTGTCAAAGACTCCATCCGTGC...GAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TTCTCGACCTGTCTGCCTTTCATCTTCCTCCATGCTCTTTCGGCAACTCTGGCATCGCCTAGGAGATTCTaGACGAGCTTTGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: FSTCLPFIFLHALSATLASPRRF*TSFGMK
Trigger: CTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGA...TGCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAAGGCAGACAGGTCGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000507587.1
CDS-3UTR CAA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTGCGGCCCTGGCGCTGTaGGGGACTTTGGGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSAALAL*GTLGSV
Trigger: CACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCCGC...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp GAGGGTCTTGGACGGGTAGGTGGGGCACACGGAGGGAAAAATTATACGCCTTCATTCCAGAAACACGATTaGCCTGCTTTAGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: EGLGRVGGAHGGKNYTPSFQKHD*PALELL
Trigger: CAGAAGCTCTAAAGCAGGCAAATCGTGTTTCTGGAA...TGAAGGCGTATAATTTTTCCCTCCGTGTGCCCCACCTACCCGTCCAAGACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CAGACCCACAGAGGCATCTCGCCTAGGAGATTCTTGACGAGCTTTGGCATGAAGGCACGGATGGAGTCTTaGACAGTGTTTTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: QTHRGISPRRFLTSFGMKARMES*TVFLIS
Trigger: GGAGATCAAAAACACTGTCAAAGACTCCATCCGTGC...CTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp CAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAATCCTCTCAGGCAGCTCCTGCTaGCAACTGGGAACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: QKKVTFFQVASWKLWGILSGSSC*QLGTSF
Trigger: AAAGGAAGTTCCCAGTTGCAAGCAGGAGCTGCCTGA...GAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp AGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGAGTGCACAGCTGCCTACTTaGGGAAGCTCTAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: SGFLEAEVGPVHSNFLTSAQLPT*GSSRTL
Trigger: CAGGGTCCTAGAGCTTCCCAAAGTAGGCAGCTGTGC...ACTCGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp CAAAAGAAAGTGACCTTCTTCCAGGTGGCAAGCTGGAAGCTTTGGGGAATCCTCCTAGGAGTGGTTTTCTaGAGGCTGAAGTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: QKKVTFFQVASWKLWGILLGVVF*RLKLVQ
Trigger: CTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAG...GAGGATTCCCCAAAGCTTCCAGCTTGCCACCTGGAAGAAGGTCACTTTCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp AGCTGTGCTAGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACCTAGGAGTGGTTTTCTaGAGGCTGAAGTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: SCARSGFLEAEVGPVHSNLGVVF*RLKLVQ
Trigger: CTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAG...GTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAGCACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000507212.1
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
CDS-3UTR CAA 90 bp CAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGGCTGGCTTCTCCTGCTaGTTGCGGCTCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: QMLLYLSARKIFTVSKVKAGFSC*LRLRRL
Trigger: CAGCCGCCGGAGCCGCAACAAGCAGGAGAAGCCAGC...CTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAACCAGCGACCTGGCCCTaGGCACTGGGAACCTCTAGG +
Preference number: 5 (lower is better)
Translates to: CVQMLLYLSARKIFTVSKPATWP*ALGTSR
Trigger: CCTAGAGGTTCCCAGTGCCAAGGGCCAGGTCGCTGG...TTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CAA 90 bp GTTCTCGACCTGTCTGCCTTTCATCTTCCTCCATGCTCTTTCGGCAACTCTGGCTCCTTTTCTTTTCTTTaGTCTGACACCTACAGTTGG +
Preference number: 5 (lower is better)
Translates to: VLDLSAFHLPPCSFGNSGSFSFL*SDTYSW
Trigger: CCAACTGTAGGTGTCAGACAAAAGAAAAGAAAAGGA...GCCAGAGTTGCCGAAAGAGCATGGAGGAAGATGAAAGGCAGACAGGTCGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp GACATGCACAATTCCAGAGATTCTACTAGAAGGCTGTCAAGAGCCATGCCTTCTCAACACCAGTCCATTTaGAGAAGGGCCTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: DMHNSRDSTRRLSRAMPSQHQSI*RRAFFP
Trigger: TGGGAAGAAGGCCCTTCTCAAAATGGACTGGTGTTG...AGAAGGCATGGCTCTTGACAGCCTTCTAGTAGAATCTCTGGAATTGTGCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507587.1
CDS-3UTR CAA 90 bp CTCACACACACTGAAGCTGGCACGGATGGAGTCTTTGACAGTGTTTTTGATCTCTCTTTGACAGTGTTTTaGATCTCCTGCAGACGGCTG +
Preference number: 5 (lower is better)
Translates to: LTHTEAGTDGVFDSVFDLSLTVF*ISCRRL
Trigger: CAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGA...GAGATCAAAAACACTGTCAAAGACTCCATCCGTGCCAGCTTCAGTGTGTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS-3UTR CAA 90 bp AGGAGTGGTTTTCTTGAGGCTGAAGTTGGTCCAGTTCACAGCAACTTTCTGACGGCACGGATGGAGTCTTaGACAGTGTTTTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: RSGFLEAEVGPVHSNFLTARMES*TVFLIS
Trigger: GGAGATCAAAAACACTGTCAAAGACTCCATCCGTGC...CGTCAGAAAGTTGCTGTGAACTGGACCAACTTCAGCCTCAAGAAAACCACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
CDS TCA 90 bp TGCTTTGCAGAATCCAAACAGAACCTGTTGGGTTTGGGGGACACATaGGAAGCACAATCAGAGGTTCATTCTTTTGCTCACTGGACTCCT +
Preference number: 5 (lower is better)
Translates to: CFAESKQNLLGLGDT*EAQSEVHSFAHWTP
Trigger: AGGAGTCCAGTGAGCAAAAGAATGAACCTCTGATTGTGCTTCTCATGTGTCCCCCAAACCCAACAGGTTCTGTTTGGATTCTGCAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506879.5
CDS-3UTR CAA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTACCCCGTCCATGTCCTaGGGCAGGAACACATCGTCC +
Preference number: 5 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSTPSMS*GRNTSS
Trigger: GGACGATGTGTTCCTGCCCAAGGACATGGACGGGGT...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGGGGGACAGGTCAAGGTaGATGTCAGGCTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VSKCCFIFRHERSSQYQKGDRSR*MSGCCS
Trigger: AGAGCAGCAGCCTGACATCAACCTTGACCTGTCCCC...CTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGCCCGGCTTGGGTGTCTaGACCCAGATCACCCGGGAT +
Preference number: 5 (lower is better)
Translates to: QMLLYLSARKIFTVSKVKPGLGV*TQITRD
Trigger: ATCCCGGGTGATCTGGGTCAAGACACCCAAGCCGGG...CTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGGAACTTCCTTTGAGCTaGGCTCCTCGGAGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: VSKCCFIFRHERSSQYQKELPLS*APRSWG
Trigger: ACCCCAGCTCCGAGGAGCCAAGCTCAAAGGAAGTTC...CTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS GCA 90 bp CAAAGTAGGTGCTCAATACCCGTTAGTTTCTTTCCTCTTCTGCCATaGACAATTCCAGAGATTCTACTAGAAGGCTGTCAAGAGCCATGC +
Preference number: 5 (lower is better)
Translates to: QSRCSIPVSFFPLLP*TIPEILLEGCQEPC
Trigger: GCATGGCTCTTGACAGCCTTCTAGTAGAATCTCTGGAATTGTGCATGGCAGAAGAGGAAAGAAACTAACGGGTATTGAGCACCTACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506432.1
CDS-3UTR CAA 90 bp AATCCTCCTACTGTTCGCTCTCAGCAGGATTCTCCAAACCTGGGATCTCAAGGTTACAGTTGGAGTCATTaGGGCAAATGTTTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: NPPTVRSQQDSPNLGSQGYSWSH*GKCLVA
Trigger: AGCAACTAAACATTTGCCCAAATGACTCCAACTGTA...ACCTTGAGATCCCAGGTTTGGAGAATCCTGCTGAGAGCGAACAGTAGGAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS-3UTR CAA 90 bp CAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGGCGCTGTTGGGGACTTaGGGCTCCGTGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: QMLLYLSARKIFTVSKVKALLGT*GSVLLM
Trigger: CATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGC...CTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000524677.5
CDS-3UTR CAA 90 bp CAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGGAACTTCCTTTGAGCTaGGCTCCTCGGAGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: QMLLYLSARKIFTVSKVKELPLS*APRSWG
Trigger: ACCCCAGCTCCGAGGAGCCAAGCTCAAAGGAAGTTC...CTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp CTGTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAATTTCCTTTTGCCGCATaGTGGCCGAAGAACTCACAG +
Preference number: 5 (lower is better)
Translates to: LCPNVALSFGTKDLHSIKFPFAA*WPKNSQ
Trigger: CTGTGAGTTCTTCGGCCACAATGCGGCAAAAGGAAA...TTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506955.5
ENST00000510479.5
CDS-3UTR CAA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTCTAGGAGTGGTTTTCTaGAGGCTGAAGTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSLGVVF*RLKLVQ
Trigger: CTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAG...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTAAAGAATTGGACAAAGAGAGCAGTGTaGGGCCAGCAGTACCATCAG +
Preference number: 5 (lower is better)
Translates to: LLYLSARKIFTVSKVKNWTKRAV*GQQYHQ
Trigger: CTGATGGTACTGCTGGCCCAACACTGCTCTCTTTGT...CCAATTCTTTACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000513282.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp GTGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTCTTTGACAGTGTTTTaGATCTCCTGCAGACGGCTG +
Preference number: 5 (lower is better)
Translates to: VSKCCFIFRHERSSQYQKSLTVF*ISCRRL
Trigger: CAGCCGTCTGCAGGAGATCAAAAACACTGTCAAAGA...CTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS-3UTR CAA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTCCACAAGACTGTGATTaGCAGGATGTGTGTGACAAG +
Preference number: 5 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSPQDCD*QDVCDK
Trigger: CTTGTCACACACATCCTGCAAATCACAGTCTTGTGG...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506955.5
ENST00000510479.5
ENST00000514747.6
CDS-3UTR CAA 90 bp TGTCCAAATGTTGCTTTATCTTTCGGCACGAAAGATCTTCACAGTATCAAAAGTTTCCAGAAACACGATTaGCCTGCTTTAGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: CPNVALSFGTKDLHSIKSFQKHD*PALELL
Trigger: CAGAAGCTCTAAAGCAGGCAAATCGTGTTTCTGGAA...ACTTTTGATACTGTGAAGATCTTTCGTGCCGAAAGATAAAGCAACATTTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000506955.5
ENST00000510163.5
ENST00000510479.5
ENST00000514747.6
ENST00000524677.5
CDS CCA 72 bp GCGGGCCGGGCACCAGGTTGGGTTCGTCATCCTCCCTaGGGCCGTCGTGGTCGGGCTCCGCCGGCGCCTCCG +
Preference number: 6 (lower is better)
Translates to: AGRAPGWVRHPP*GRRGRAPPAPP
Trigger: CGGAGGCGCCGGCGGAGCCCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507587.1
ENST00000508298.5
ENST00000514747.6
CDS CCA 72 bp ACCAGGTTGGGTTCGTCATCCTCCCTGGGGCCGTCGTaGTCGGGCTCCGCCGGCGCCTCCGGAGGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: TRLGSSSSLGPS*SGSAGASGGPA
Trigger: TGCAGGCCCTCCGGAGGCGCCGGCGGAGCCCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506955.5
ENST00000507587.1
ENST00000508298.5
ENST00000514747.6
CDS CCA 72 bp CCCCGCTCGCTCCTACCTGCGGGCCGGGCACCAGGTTaGGTTCGTCATCCTCCCTGGGGCCGTCGTGGTCGG +
Preference number: 6 (lower is better)
Translates to: PRSLLPAGRAPG*VRHPPWGRRGR
Trigger: CCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGTAGGAGCGAGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS CAA 90 bp GCCGAAGTCTCCCCGCTCGCTCCTACCTGCGGGCCGGGCACCAGGTaGGGTTCGTCATCCTCCCTGGGGCCGTCGTGGTCGGGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: AEVSPLAPTCGPGTR*GSSSSLGPSWSGSA
Trigger: GGCGGAGCCCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGTAGGAGCGAGCGGGGAGACTTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS CCA 72 bp AGCCTAGTCGCAGGAGCGCGGACCGAGCCTCGGCTTTaGGGAGAGGGGTCCAGCCTCCATTCCCGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: SLVAGARTEPRL*GEGSSLHSRPG
Trigger: CCCGGGGCGGGAATGGAGGCTGGACCCCTCTCCCCAAAGCCGAGGCTCGGTCCGCGCTCCTGCGACTAGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS CAA 72 bp TCCCCGCTCGCTCCTACCTGCGGGCCGGGCACCAGGTaGGGTTCGTCATCCTCCCTGGGGCCGTCGTGGTCG +
Preference number: 6 (lower is better)
Translates to: SPLAPTCGPGTR*GSSSSLGPSWS
Trigger: CGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGTAGGAGCGAGCGGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506955.5
CDS GCA 72 bp GCAGGGCTGGGGCAGCTGGCAAGCCAGGCCACTGTGTaGAAACTTGTGCCCCTTGCACCCGGGATCCCTGGC +
Preference number: 6 (lower is better)
Translates to: AGLGQLASQATV*KLVPLAPGIPG
Trigger: GCCAGGGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508298.5
CDS CCA 72 bp TCTTTCCTCTTCTGCCCTGCGGGCCGGGCACCAGGTTaGGTTCGTCATCCTCCCTGGGGCCGTCGTGGTCGG +
Preference number: 6 (lower is better)
Translates to: SFLFCPAGRAPG*VRHPPWGRRGR
Trigger: CCGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGGCAGAAGAGGAAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508298.5
CDS CAA 72 bp TGGGGCAGCTGGCAAGCCAGGCCACTGTGTGCAAACTaGTGCCCCTTGCACCCGGGATCCCTGGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: WGSWQARPLCAN*CPLHPGSLAWA
Trigger: GGCCCAGGCCAGGGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGGCCTGGCTTGCCAGCTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508298.5
CDS CAA 90 bp TCGCAGGGCTGGGGCAGCTGGCAAGCCAGGCCACTGTGTGCAAACTaGTGCCCCTTGCACCCGGGATCCCTGGCCTGGGCCTGGCACAAA +
Preference number: 6 (lower is better)
Translates to: SQGWGSWQARPLCAN*CPLHPGSLAWAWHK
Trigger: TTTGTGCCAGGCCCAGGCCAGGGATCCCGGGTGCAAGGGGCACAAGTTTGCACACAGTGGCCTGGCTTGCCAGCTGCCCCAGCCCTGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508298.5
CDS CAA 72 bp TTCTTTCCTCTTCTGCCCTGCGGGCCGGGCACCAGGTaGGGTTCGTCATCCTCCCTGGGGCCGTCGTGGTCG +
Preference number: 6 (lower is better)
Translates to: FFPLLPCGPGTR*GSSSSLGPSWS
Trigger: CGACCACGACGGCCCCAGGGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGGCAGAAGAGGAAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508298.5
CDS GCA 72 bp AGCCTGCTTACCCACCCTGCAGGAGTGAGGGCAAACTaGAGCCAGACAGGTACATGTCCTGGGGGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: SLLTHPAGVRAN*SQTGTCPGGRG
Trigger: ACCCCTGCCCCCAGGACATGTACCTGTCTGGCTGCAGTTTGCCCTCACTCCTGCAGGGTGGGTAAGCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505569.5
CDS CAA 90 bp CGGCAACTCTGGCAGACCCACAGAGGCATCTCGCCTAGGAGATTCTaGACGAGCTTTGGCATGAAGTCAGGGGGCAGCTTCTCACCATGC +
Preference number: 6 (lower is better)
Translates to: RQLWQTHRGISPRRF*TSFGMKSGGSFSPC
Trigger: GCATGGTGAGAAGCTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTGCCAGAGTTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510429.1
CDS CAA 90 bp CCTGTCCCTCGGCTGGCTGTCACACTTGGGGGACTGAGAGCCTTTTaGCTTCCACTCTGCCTTCATCACTCCCAAGCGTTCACTTCTCGC +
Preference number: 6 (lower is better)
Translates to: PVPRLAVTLGGLRAF*LPLCLHHSQAFTSR
Trigger: GCGAGAAGTGAACGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGTGACAGCCAGCCGAGGGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510163.5
CDS TCA 72 bp CAGGAGGCTGTCAACTGCCAGGCACAATGTGATACCTaGCCCATCAGCCTGGGGCCCAGCTTTGCCACTAAC +
Preference number: 6 (lower is better)
Translates to: QEAVNCQAQCDT*PISLGPSFATN
Trigger: GTTAGTGGCAAAGCTGGGCCCCAGGCTGATGGGTCAGGTATCACATTGTGCCTGGCAGTTGACAGCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505569.5
CDS GCA 72 bp TGCTCAATACCCGTTAGTTTCTTTCCTCTTCTGCCCTaGGGGCCGGGCACCAGGTTGGGTTCGTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: CSIPVSFFPLLP*GPGTRLGSSSS
Trigger: GGAGGATGACGAACCCAACCTGGTGCCCGGCCCGCAGGGCAGAAGAGGAAAGAAACTAACGGGTATTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508298.5
CDS CCA 72 bp CAACTGTTCTCTCTACCATTAGCCACCAAGGCCACATaGCTTCACCCTCTCAGCCAGGCTGAATCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: QLFSLPLATKAT*LHPLSQAESRR
Trigger: CCGCCTGGATTCAGCCTGGCTGAGAGGGTGAAGCCATGTGGCCTTGGTGGCTAATGGTAGAGAGAACAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513502.1
CDS CCA 72 bp ACTGCCAGGCACAATGTGATACCTGACCCATCAGCCTaGGGCCCAGCTTTGCCACTAACTTGCTGGAAGCAA +
Preference number: 6 (lower is better)
Translates to: TARHNVIPDPSA*GPALPLTCWKQ
Trigger: TTGCTTCCAGCAAGTTAGTGGCAAAGCTGGGCCCCAGGCTGATGGGTCAGGTATCACATTGTGCCTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505569.5
CDS CAA 90 bp GCCAGGCACAATGTGATACCTGACCCATCAGCCTGGGGCCCAGCTTaGCCACTAACTTGCTGGAAGCAAAGCCTTAAAATCCTAGCCTGC +
Preference number: 6 (lower is better)
Translates to: ARHNVIPDPSAWGPA*PLTCWKQSLKILAC
Trigger: GCAGGCTAGGATTTTAAGGCTTTGCTTCCAGCAAGTTAGTGGCAAAGCTGGGCCCCAGGCTGATGGGTCAGGTATCACATTGTGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505569.5
CDS GCA 72 bp ACACTTGGGGGACTGAGAGCCTTTTTGCTTCCACTCTaGCTTCATCACTCCCAAGCGTTCACTTCTCGCATT +
Preference number: 6 (lower is better)
Translates to: TLGGLRAFLLPL*LHHSQAFTSRI
Trigger: AATGCGAGAAGTGAACGCTTGGGAGTGATGAAGGCAGAGTGGAAGCAAAAAGGCTCTCAGTCCCCCAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510163.5
CDS GCA 72 bp GGTCCAGTTCACAGCAACTTTCTGACGAGTCTGCTTTaGAGAATCCAAACAGAACCTCAAGTGATCCGCCTG +
Preference number: 6 (lower is better)
Translates to: GPVHSNFLTSLL*RIQTEPQVIRL
Trigger: CAGGCGGATCACTTGAGGTTCTGTTTGGATTCTGCAAAGCAGACTCGTCAGAAAGTTGCTGTGAACTGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504130.5
CDS TCA 72 bp GAATCCAAACAGAACCTGTTGGGTTTGGGGGACACATaGGAAGCACAATCAGAGGTTCATTCTTTTGCTCAC +
Preference number: 6 (lower is better)
Translates to: ESKQNLLGLGDT*EAQSEVHSFAH
Trigger: GTGAGCAAAAGAATGAACCTCTGATTGTGCTTCTCATGTGTCCCCCAAACCCAACAGGTTCTGTTTGGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506879.5