RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM186B (Homo sapiens)

Ensembl gene IDs: ENSG00000135436

Ensembl transcript IDs: ENST00000257894.2, ENST00000532262.5, ENST00000533372.1, ENST00000548841.5, ENST00000551047.5

Found 686 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCCTGAGCGCGCCCAGCTCCATGGTGGTGGTGGTGAGCTCCAGTaGTTTGCTGCGCAGGTAGTGGGGCAGCCTCAACTCAGACTCCTC +
Preference number: 1 (lower is better)
Translates to: QPERAQLHGGGGELQ*FAAQVVGQPQLRLL
Trigger: GAGGAGTCTGAGTTGAGGCTGCCCCACTACCTGCGCAGCAAAGCACTGGAGCTCACCACCACCACCATGGAGCTGGGCGCGCTCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp ACCATGCTGCTCAGGCACTCTCGGTGCTTCTCCTCCAGCCCCTTCTaGTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCA +
Preference number: 1 (lower is better)
Translates to: TMLLRHSRCFSSSPF*LSVQACSLRLCRRS
Trigger: TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCTGGAGGAGAAGCACCGAGAGTGCCTGAGCAGCATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 90 bp TGCCTCCGCATCTCCCGGCCGAATTCCTCCTCCCAGGGCTCCTCTTaGCTCTCAGAGGTCACCTGCCTGGAGCTCTCTAGAGACAGCTGC +
Preference number: 1 (lower is better)
Translates to: CLRISRPNSSSQGSS*LSEVTCLELSRDSC
Trigger: GCAGCTGTCTCTAGAGAGCTCCAGGCAGGTGACCTCTGAGAGCCAAGAGGAGCCCTGGGAGGAGGAATTCGGCCGGGAGATGCGGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp TCCACATCCTCCCCTAGCTGCTCTGGCTCTCTCCGTGGGCTCTCCTaGTCCTTTTCTAGCTGGACCCATCTCCGCTGTTGCTCCCTGGCC +
Preference number: 1 (lower is better)
Translates to: STSSPSCSGSLRGLS*SFSSWTHLRCCSLA
Trigger: GGCCAGGGAGCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCAGGAGAGCCCACGGAGAGAGCCAGAGCAGCTAGGGGAGGATGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp CCTGGGACCCGAGAGGCTGGAAACAGCCCAGGGCCAGCACAGCTGTaGTGTGCATGTGTCCTGCATCATGATGCCAACTCCCCTTCCTCC +
Preference number: 1 (lower is better)
Translates to: PGTREAGNSPGPAQL*CACVLHHDANSPSS
Trigger: GGAGGAAGGGGAGTTGGCATCATGATGCAGGACACATGCACAGCACAGCTGTGCTGGCCCTGGGCTGTTTCCAGCCTCTCGGGTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CCA 90 bp CTTTCCCAGGGCAGGCTGCTGGGTACTAGGAGACATGGGCAAGTGTaGCCTCCTGCTTTGGTGAGCAGATTGGGTCCGGCTTGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: LSQGRLLGTRRHGQV*PPALVSRLGPAWGR
Trigger: CCTGCCCCAAGCCGGACCCAATCTGCTCACCAAAGCAGGAGGCCACACTTGCCCATGTCTCCTAGTACCCAGCAGCCTGCCCTGGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp CGTGGGCTCTCCTGCTCCTTTTCTAGCTGGACCCATCTCCGCTGTTaGTCCCTGGCCAGGTCTTCCAGATTCCACTGCCGCAGCTTCTCC +
Preference number: 1 (lower is better)
Translates to: RGLSCSFSSWTHLRC*SLARSSRFHCRSFS
Trigger: GGAGAAGCTGCGGCAGTGGAATCTGGAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCAGGAGAGCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp GCCCTGACCTCCCCCTTGCTGAACATGGTAGAGTCCAGGAGCTCCTaGAGCATGGACGTCACCTCCGAGGCCTTCGTGTTCATGGTATGC +
Preference number: 1 (lower is better)
Translates to: ALTSPLLNMVESRSS*SMDVTSEAFVFMVC
Trigger: GCATACCATGAACACGAAGGCCTCGGAGGTGACGTCCATGCTGCAGGAGCTCCTGGACTCTACCATGTTCAGCAAGGGGGAGGTCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp TGCGACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTGGTGCCCTaGAGCTATAGCACCACTGTCCCGTATCATGGCCATGGGACTTGG +
Preference number: 1 (lower is better)
Translates to: CDPRAHSHGGKWLVP*SYSTTVPYHGHGTW
Trigger: CCAAGTCCCATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp AAGCACAGGCTCAAGGCTCTCAGTGTCCTTGCTGCCGAACACATCTaGGACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTGGTGCCC +
Preference number: 1 (lower is better)
Translates to: KHRLKALSVLAAEHI*DPRAHSHGGKWLVP
Trigger: GGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCTTGAGCCTGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 90 bp GCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAAGTaGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGC +
Preference number: 1 (lower is better)
Translates to: AEHICDPRAHSHGGK*LVPCSYSTTVPYHG
Trigger: GCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 90 bp AGCTGCTCTGGCTCTCTCCGTGGGCTCTCCTGCTCCTTTTCTAGCTaGACCCATCTCCGCTGTTGCTCCCTGGCCAGGTCTTCCAGATTC +
Preference number: 1 (lower is better)
Translates to: SCSGSLRGLSCSFSS*THLRCCSLARSSRF
Trigger: GAATCTGGAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCAGGAGAGCCCACGGAGAGAGCCAGAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp ACATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTGGTaGCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGGGA +
Preference number: 1 (lower is better)
Translates to: TSATLERTVMVESGW*PAAIAPLSRIMAMG
Trigger: TCCCATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp TCTCGGTGCTTCTCCTCCAGCCCCTTCTGCTTGTCCGTCCAGGCCTaGAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGGAAGATG +
Preference number: 1 (lower is better)
Translates to: SRCFSSSPFCLSVQA*SLRLCRRSMFSRKM
Trigger: CATCTTCCTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCTGGAGGAGAAGCACCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 90 bp AACACATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTaGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATG +
Preference number: 1 (lower is better)
Translates to: NTSATLERTVMVESG*CPAAIAPLSRIMAM
Trigger: CATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 90 bp CACACCCCACATCCTCCTCAGCTTTCTGGAGTCTCAGCCTTAGGCTaGAAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGA +
Preference number: 1 (lower is better)
Translates to: HTPHPPQLSGVSALG*KQGWAPFLRKRTAG
Trigger: TCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTTCCAGCCTAAGGCTGAGACTCCAGAAAGCTGAGGAGGATGTGGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR TCA 90 bp TGCTGGGTACTAGGAGACATGGGCAAGTGTGGCCTCCTGCTTTGGTaGGCAGATTGGGTCCGGCTTGGGGCAGGCACTAATGATAGCTCT +
Preference number: 1 (lower is better)
Translates to: CWVLGDMGKCGLLLW*ADWVRLGAGTNDSS
Trigger: AGAGCTATCATTAGTGCCTGCCCCAAGCCGGACCCAATCTGCTCACCAAAGCAGGAGGCCACACTTGCCCATGTCTCCTAGTACCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR TCA 90 bp GGGGTGAGGCTGCAGGCAACTTGCATTTCTTTGGCTTTGGCGAGGTaGCCTCAGGGATGTTCAGGTGAACGTTCCACTCCAGCTGGAGCT +
Preference number: 1 (lower is better)
Translates to: GVRLQATCISLALAR*PQGCSGERSTPAGA
Trigger: AGCTCCAGCTGGAGTGGAACGTTCACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTGCCTGCAGCCTCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp TGCAGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTGCATTTGCAGGTaGCTGTATTTGGTCTCCAGGCTCCTGTTCTCCTTGTGTTGGAGG +
Preference number: 1 (lower is better)
Translates to: CSLWLLSSLVACICR*LYLVSRLLFSLCWR
Trigger: CCTCCAACACAAGGAGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp AACTGCTGGAAGTGCAGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTaGATTTGCAGGTGCCTGTATTTGGTCTCCAGGCTCCTGTTCTCC +
Preference number: 1 (lower is better)
Translates to: NCWKCSLWLLSSLVA*ICRCLYLVSRLLFS
Trigger: GGAGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGCACTTCCAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp TGGAAGTGCAGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTGCATTTaGAGGTGCCTGTATTTGGTCTCCAGGCTCCTGTTCTCCTTGTGT +
Preference number: 1 (lower is better)
Translates to: WKCSLWLLSSLVACI*RCLYLVSRLLFSLC
Trigger: ACACAAGGAGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGCACTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp GATCTACTAAGGGTAAAAGCACAGGCTCAAGGCTCTCAGTGTCCTTaGTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGG +
Preference number: 1 (lower is better)
Translates to: DLLRVKAQAQGSQCP*CRTHLRPSSAQSWW
Trigger: CCACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCTTGAGCCTGTGCTTTTACCCTTAGTAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp CTCAGAGGGACCTGGGGAGTCAACAGAAACCTCAGCCAGGTCTTCTaGCTGACCTGTAGCATTCTGAGCCTTCTTCAGCTGGAACTCCAA +
Preference number: 1 (lower is better)
Translates to: LRGTWGVNRNLSQVF*LTCSILSLLQLELQ
Trigger: TTGGAGTTCCAGCTGAAGAAGGCTCAGAATGCTACAGGTCAGGCAGAAGACCTGGCTGAGGTTTCTGTTGACTCCCCAGGTCCCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp TCCCGTATCATGGCCATGGGACTTGGGGGAAGTGGCGAGAACAACTaGTCCTCCTTCATCGGTTCCTGTTGGCTTTCCTCCATGACTGTT +
Preference number: 1 (lower is better)
Translates to: SRIMAMGLGGSGENN*SSFIGSCWLSSMTV
Trigger: AACAGTCATGGAGGAAAGCCAACAGGAACCGATGAAGGAGGAGCAGTTGTTCTCGCCACTTCCCCCAAGTCCCATGGCCATGATACGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp CTACTAAGGGTAAAAGCACAGGCTCAAGGCTCTCAGTGTCCTTGCTaGCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAA +
Preference number: 1 (lower is better)
Translates to: LLRVKAQAQGSQCPC*RTHLRPSSAQSWWK
Trigger: TTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCTTGAGCCTGTGCTTTTACCCTTAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR TCA 90 bp TGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTaGGAATCACTGGCTGAGGGATGCAGTGGAGACTGGGGCTGTCTT +
Preference number: 1 (lower is better)
Translates to: CILTKFSVGFRPSEG*ESLAEGCSGDWGCL
Trigger: AAGACAGCCCCAGTCTCCACTGCATCCCTCAGCCAGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
3UTR TCA 90 bp AGACGCTTGCCAGAGACGGCCTCCTTAGCCCACACCGTCTATATTTaGACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGAGACAC +
Preference number: 1 (lower is better)
Translates to: RRLPETASLAHTVYI*TSCLHVFHLCPQRH
Trigger: GTGTCTCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTTCAAATATAGACGGTGTGGGCTAAGGAGGCCGTCTCTGGCAAGCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR TCA 90 bp ATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCTaGGGATGGGGTAATTTCCTATTTGTATGCCTGTTCCCTAGGCCA +
Preference number: 1 (lower is better)
Translates to: MGAIPEEENRWTWVL*GWGNFLFVCLFPRP
Trigger: TGGCCTAGGGAACAGGCATACAAATAGGAAATTACCCCATCCTCAGAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR GCA 90 bp TTCATCAGGAGAAGGTCATGGTACCTTCCCCCTAAGATCTCTACCTaGTTCAGCAGAGCATCCCTCCTGCTCTCAAGGACCTCCATGAAC +
Preference number: 1 (lower is better)
Translates to: FIRRRSWYLPPKIST*FSRASLLLSRTSMN
Trigger: GTTCATGGAGGTCCTTGAGAGCAGGAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAGGTACCATGACCTTCTCCTGATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 90 bp TCTTGGCTCTCAGAGGTCACCTGCCTGGAGCTCTCTAGAGACAGCTaGTTGCTACAGTGGAACTTAATTTGGAGTCCTCCCTTCTGGAAG +
Preference number: 1 (lower is better)
Translates to: SWLSEVTCLELSRDS*LLQWNLIWSPPFWK
Trigger: CTTCCAGAAGGGAGGACTCCAAATTAAGTTCCACTGTAGCAAGCAGCTGTCTCTAGAGAGCTCCAGGCAGGTGACCTCTGAGAGCCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 90 bp TTCTTCAGCTGGAACTCCAAGGCCTGCTTCATCAGGAGAAGGTCATaGTACCTTCCCCCTAAGATCTCTACCTGCTTCAGCAGAGCATCC +
Preference number: 1 (lower is better)
Translates to: FFSWNSKACFIRRRS*YLPPKISTCFSRAS
Trigger: GGATGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAGGTACCATGACCTTCTCCTGATGAAGCAGGCCTTGGAGTTCCAGCTGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR TCA 90 bp CCACCTTTGTCCTCAGAGACACGCTCACCTTTGCCTCCCACCTTATaGCACCTGGCTCTGGTCTGTATTTGGTATCTCCTTTTGTTCTCA +
Preference number: 1 (lower is better)
Translates to: PPLSSETRSPLPPTL*HLALVCIWYLLLFS
Trigger: TGAGAACAAAAGGAGATACCAAATACAGACCAGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGACAAAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CCA 90 bp TGTCCTCAGAGACACGCTCACCTTTGCCTCCCACCTTATGACACCTaGCTCTGGTCTGTATTTGGTATCTCCTTTTGTTCTCACCTTCTG +
Preference number: 1 (lower is better)
Translates to: CPQRHAHLCLPPYDT*LWSVFGISFCSHLL
Trigger: CAGAAGGTGAGAACAAAAGGAGATACCAAATACAGACCAGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR GCA 90 bp ATGTCCATGTGGTACACCTTCTTCTTAATATTTGCAGGGGATATCTaGAAAGAGGGCCAGGTCAGCCTTCGGATGGATGTCCCAGTGACA +
Preference number: 1 (lower is better)
Translates to: MSMWYTFFLIFAGDI*KEGQVSLRMDVPVT
Trigger: TGTCACTGGGACATCCATCCGAAGGCTGACCTGGCCCTCTTTGCAGATATCCCCTGCAAATATTAAGAAGAAGGTGTACCACATGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 90 bp CAGAGACACGCTCACCTTTGCCTCCCACCTTATGACACCTGGCTCTaGTCTGTATTTGGTATCTCCTTTTGTTCTCACCTTCTGAGCTTT +
Preference number: 1 (lower is better)
Translates to: QRHAHLCLPPYDTWL*SVFGISFCSHLLSF
Trigger: AAAGCTCAGAAGGTGAGAACAAAAGGAGATACCAAATACAGACCAGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR GCA 90 bp ATGAAATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATaGTTGCCAGAGAGCTCGCTAGAGGACGTGCAGAAGGTCAAAGTC +
Preference number: 1 (lower is better)
Translates to: MKLLPKQEKNVRHSA*LPESSLEDVQKVKV
Trigger: GACTTTGACCTTCTGCACGTCCTCTAGCGAGCTCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAATTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
3UTR GCA 90 bp GAAGATGAAATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTaGATGCTTGCCAGAGAGCTCGCTAGAGGACGTGCAGAAGGTCAA +
Preference number: 1 (lower is better)
Translates to: EDEIVTKAGEECQTL*MLARELARGRAEGQ
Trigger: TTGACCTTCTGCACGTCCTCTAGCGAGCTCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAATTTCATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
3UTR TCA 90 bp CCTGGCTCTGGTCTGTATTTGGTATCTCCTTTTGTTCTCACCTTCTaGGCTTTCATGCAGATCACTGGCATGTCAGTGACATATCTGTCC +
Preference number: 1 (lower is better)
Translates to: PGSGLYLVSPFVLTF*AFMQITGMSVTYLS
Trigger: GGACAGATATGTCACTGACATGCCAGTGATCTGCATGAAAGCTCAGAAGGTGAGAACAAAAGGAGATACCAAATACAGACCAGAGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR TCA 90 bp GCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGATaGAATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCAT +
Preference number: 1 (lower is better)
Translates to: ASQLGPCRLSLPLRR*NCYQSRRRMSDTLH
Trigger: ATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAATTTCATCTTCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
3UTR CCA 90 bp CACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTaGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGATGAAATTGTTA +
Preference number: 1 (lower is better)
Translates to: HTHIYLSSNPLGFTA*PVQAFFAFKKMKLL
Trigger: TAACAATTTCATCTTCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
3UTR TCA 90 bp GATCACTGGCATGTCAGTGACATATCTGTCCATATTTTGATTAAATaGAGAGTTACACCTACTAAGTGCCAGGTGCCAATCACAGCTATC +
Preference number: 1 (lower is better)
Translates to: DHWHVSDISVHILIK*RVTPTKCQVPITAI
Trigger: GATAGCTGTGATTGGCACCTGGCACTTAGTAGGTGTAACTCTTCATTTAATCAAAATATGGACAGATATGTCACTGACATGCCAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR GCA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCATTCTTCTGCCGCTGCTaGCACATCTCCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSFFCRC*HISSSS
Trigger: GGAGGAGGAGGAGATGTGGCAGCAGCGGCAGAAGAA...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CCA 90 bp CATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTGGTGCCCTGCAGGGGACTTGGGGGAAGTaGCGAGAACAACTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: HLRPSSAQSWWKVAGALQGTWGK*REQLLL
Trigger: GAGGAGCAGTTGTTCTCGCCACTTCCCCCAAGTCCC...CTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR GCA 90 bp CTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGACCCATCTCCGCTGTTaGTCCCTGGCCAGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: LVRPGLQPETLQAVNVFQTHLRC*SLARSS
Trigger: GGAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGT...CTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CCA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCACCTCTTCACTCTTCCTaGGCCCAATCTCATAGGTCA +
Preference number: 2 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSPLHSS*AQSHRS
Trigger: TGACCTATGAGATTGGGCCCAGGAAGAGTGAAGAGG...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR TCA 90 bp GGAAGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCGCAGCCTCTGGCTGCTaGGCTCTTTGGTCGCCTGCA +
Preference number: 2 (lower is better)
Translates to: GSSPPGLCLCGLSFLPPVAASGC*ALWSPA
Trigger: TGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGC...GACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR GCA 90 bp CTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGAGCCCTGCCAGAAGGTaGGTTTGGACACTTGTGACC +
Preference number: 2 (lower is better)
Translates to: LVRPGLQPETLQAVNVFQSPARR*VWTLVT
Trigger: GGTCACAAGTGTCCAAACGCACCTTCTGGCAGGGCT...CTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR GCA 90 bp TGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTCTTCCCTGCCAGCCCTaGCAGAAGGTGCGTTTGGAC +
Preference number: 2 (lower is better)
Translates to: CRRSKSSITRASSATRPLLPCQP*QKVRLD
Trigger: GTCCAAACGCACCTTCTGGCAGGGCTGGCAGGGAAG...AAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR GCA 90 bp CTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGAAGTGGCTGGTGCCCTaGAGCTATAGCACCACTGTC +
Preference number: 2 (lower is better)
Translates to: LVRPGLQPETLQAVNVFQKWLVP*SYSTTV
Trigger: GACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTT...CTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR GCA 90 bp CAGCTTTCTGGAGTCTCAGCCTTAGGCTGGAAGCAAGGATGGGCGCCATTCCTGTCACTGGCTGAGGGATaGAGTGGAGACTGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: QLSGVSALGWKQGWAPFLSLAEG*SGDWGC
Trigger: ACAGCCCCAGTCTCCACTGCATCCCTCAGCCAGTGA...CAGGAATGGCGCCCATCCTTGCTTCCAGCCTAAGGCTGAGACTCCAGAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR CCA 90 bp TGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTTCCCAGGGCTCCTCTTaGCTCTCAGAGGTCACCTGC +
Preference number: 2 (lower is better)
Translates to: CRRSKSSITRASSATRPLSQGSS*LSEVTC
Trigger: GCAGGTGACCTCTGAGAGCCAAGAGGAGCCCTGGGA...AAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 90 bp CTGGAAGTGCAGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTGCATTaGCAGGTGCCTGTATTTGGTCTCCAGGCTCCTGTTCTCCTTGTG +
Preference number: 2 (lower is better)
Translates to: LEVQPLAAELFGRLH*QVPVFGLQAPVLLV
Trigger: CACAAGGAGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGCACTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 90 bp ACCTCCATGAACTGCTGGAAGTGCAGCCTCTGGCTGCTGAGCTCTTaGGTCGCCTGCATTTGCAGGTGCCTGTATTTGGTCTCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: TSMNCWKCSLWLLSS*VACICRCLYLVSRL
Trigger: GAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGCACTTCCAGCAGTTCATGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CCA 90 bp CTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGAGGAGGCAGATTTCTTaGGCTTTGTGGGAACTCGGC +
Preference number: 2 (lower is better)
Translates to: LVRPGLQPETLQAVNVFQRRQIS*ALWELG
Trigger: GCCGAGTTCCCACAAAGCCCAAGAAATCTGCCTCCT...CTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 90 bp TGGCTGCTGAGCTCTTTGGTCGCCTGCATTTGCAGGTGCCTGTATTaGGTCTCCAGGCTCCTGTTCTCCTTGTGTTGGAGGATCAAGGCC +
Preference number: 2 (lower is better)
Translates to: WLLSSLVACICRCLY*VSRLLFSLCWRIKA
Trigger: GGCCTTGATCCTCCAACACAAGGAGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 90 bp CGATCTACTAAGGGTAAAAGCACAGGCTCAAGGCTCTCAGTGTCCTaGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTG +
Preference number: 2 (lower is better)
Translates to: RSTKGKSTGSRLSVS*LPNTSATLERTVMV
Trigger: CACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCTTGAGCCTGTGCTTTTACCCTTAGTAGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR TCA 90 bp ACATCCTCCTCAGCTTTCTGGAGTCTCAGCCTTAGGCTGGAAGCAAGGATGGGCCGTCCCTCAGAAGGTTaGGAATCACTGGCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: TSSSAFWSLSLRLEARMGRPSEG*ESLAEG
Trigger: TCCCTCAGCCAGTGATTCTCAACCTTCTGAGGGACG...GCCCATCCTTGCTTCCAGCCTAAGGCTGAGACTCCAGAAAGCTGAGGAGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR CCA 90 bp CTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGATGGTATGCTGGTCCTaGAGCATCTGTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: LVRPGLQPETLQAVNVFQMVCWS*SICSGL
Trigger: AAGCCCAGAACAGATGCTCCAGGACCAGCATACCAT...CTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR GCA 90 bp GGAAGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCATGAACTGCTGGAAGTaGAGCCTCTGGCTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: GSSPPGLCLCGLSFLPPVMNCWK*SLWLLS
Trigger: GCTCAGCAGCCAGAGGCTGCACTTCCAGCAGTTCAT...GACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CCA 90 bp GTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGGGCCTTGTAGGAAGCCTCCGTCCCGTATCATGGCCATaGGACTTGGGGGAAGTGGCG +
Preference number: 2 (lower is better)
Translates to: VNVFQEDVEVLGLVGSLRPVSWP*DLGEVA
Trigger: CGCCACTTCCCCCAAGTCCCATGGCCATGATACGGG...ACGGAGGCTTCCTACAAGGCCCAGAACCTCTACATCTTCCTGGAAAACATTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR GCA 90 bp AAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCTCTACTAAGTGCCAGGTaGCAATCACAGCTATCTCGG +
Preference number: 2 (lower is better)
Translates to: KQGWAPFLRKRTAGHGFSLLSAR*QSQLSR
Trigger: CCGAGATAGCTGTGATTGGCACCTGGCACTTAGTAG...AGAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR CCA 90 bp TTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCTGGCTGAGGATGGGATaGAGATGTCTGTGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: FVFQPSWLHSLARAGFLCWLRMG*RCLWAS
Trigger: AGAAGCCCACAGACATCTCCATCCCATCCTCAGCCA...GCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CCA 90 bp TCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGTGCCAAGAGCCTTACTaGGCCTTCAGGAAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: SNPLGFTAWPVQAFFAFKCQEPY*AFRKFR
Trigger: CCTGAACTTCCTGAAGGCCCAGTAAGGCTCTTGGCA...CTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548841.5
3UTR CAA 90 bp GTAGAGGTTCTGGGCCTTGTAGGAAGCCTCCGTTTCTTTCATGATTaGTACATGGTTGATCGCTTCTTGCCGGAGGCTCTGGAGGCGTCT +
Preference number: 2 (lower is better)
Translates to: VEVLGLVGSLRFFHD*YMVDRFLPEALEAS
Trigger: AGACGCCTCCAGAGCCTCCGGCAAGAAGCGATCAACCATGTACAAATCATGAAAGAAACGGAGGCTTCCTACAAGGCCCAGAACCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 90 bp CAGACGCTTGCCAGAGACGGCCTCCTTAGCCCACACCGTCTATATTaGAACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGAGACA +
Preference number: 2 (lower is better)
Translates to: QTLARDGLLSPHRLY*NLMSPCLPPLSSET
Trigger: TGTCTCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTTCAAATATAGACGGTGTGGGCTAAGGAGGCCGTCTCTGGCAAGCGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR TCA 90 bp CACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAAGACTGGGGCTGTCTTaGTCCTTCTGGCTTATTTGG +
Preference number: 2 (lower is better)
Translates to: HQLGTCILTKFSVGFRPSRLGLS*SFWLIW
Trigger: CCAAATAAGCCAGAAGGATCAAGACAGCCCCAGTCT...TGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
3UTR-3UTR GCA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCACTGGCTGAGGGATaGAGTGGAGACTGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPSLAEG*SGDWGC
Trigger: ACAGCCCCAGTCTCCACTGCATCCCTCAGCCAGTGA...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
3UTR-3UTR CCA 90 bp CTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGAGCTGCTTGCTACAGTaGAACTTAATTTGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: LVRPGLQPETLQAVNVFQSCLLQ*NLIWSP
Trigger: AGGACTCCAAATTAAGTTCCACTGTAGCAAGCAGCT...CTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CCA 90 bp CAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGTGCTCCTTTTCTAGCTaGACCCATCTCCGCTGTTGC +
Preference number: 2 (lower is better)
Translates to: QPETLQAVNVFQEDVEVLCSFSS*THLRCC
Trigger: GCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCA...CAGAACCTCTACATCTTCCTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CCA 90 bp ACATCCTCCTCAGCTTTCTGGAGTCTCAGCCTTAGGCTGGAAGCAAGGATGGGCCCACCTTATGACACCTaGCTCTGGTCTGTATTTGGT +
Preference number: 2 (lower is better)
Translates to: TSSSAFWSLSLRLEARMGPPYDT*LWSVFG
Trigger: ACCAAATACAGACCAGAGCCAGGTGTCATAAGGTGG...GCCCATCCTTGCTTCCAGCCTAAGGCTGAGACTCCAGAAAGCTGAGGAGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CAA 90 bp TCAATGAGAGTGGAGCAAAGGGCAGTGAGTGACTCGATGCCTCTTTaGGTGGCAATGAGGGACAGCGGTAACACTTTCTCCGTCACTTCA +
Preference number: 2 (lower is better)
Translates to: SMRVEQRAVSDSMPL*VAMRDSGNTFSVTS
Trigger: TGAAGTGACGGAGAAAGTGTTACCGCTGTCCCTCATTGCCACCAAAAGAGGCATCGAGTCACTCACTGCCCTTTGCTCCACTCTCATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR TCA 90 bp TCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCCTTCCTTTGGTTCGCTaGGGCGCTTACTGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: SQSSRSTQQPPEGFFKSTLPLVR*GAYWAF
Trigger: GAAGGCCCAGTAAGCGCCTCAGCGAACCAAAGGAAG...GGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
3UTR-3UTR TCA 90 bp ACATCCTCCTCAGCTTTCTGGAGTCTCAGCCTTAGGCTGGAAGCAAGGATGGGCCACACCGTCTATATTTaGACCTCATGTCTCCATGTC +
Preference number: 2 (lower is better)
Translates to: TSSSAFWSLSLRLEARMGHTVYI*TSCLHV
Trigger: GACATGGAGACATGAGGTTCAAATATAGACGGTGTG...GCCCATCCTTGCTTCCAGCCTAAGGCTGAGACTCCAGAAAGCTGAGGAGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR GCA 90 bp TTTGTCCTCAGAGACACGCTCACCTTTGCCTCCCACCTTATGACACCTGGCTCTCCTTCTGAGCTTTCATaGAGATCACTGGCATGTCAG +
Preference number: 2 (lower is better)
Translates to: FVLRDTLTFASHLMTPGSPSELS*RSLACQ
Trigger: CTGACATGCCAGTGATCTGCATGAAAGCTCAGAAGG...AGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR CCA 90 bp TCAGTGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGTATCCTAATTCTTCCTaGAAGCGGTTGATGACACAA +
Preference number: 2 (lower is better)
Translates to: SVSLLPNTSATLERTVMVYPNSS*KRLMTQ
Trigger: TTGTGTCATCAACCGCTTCCAGGAAGAATTAGGATA...CACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CCA 90 bp GCCTCCATGTCCATGTGGTACACCTTCTTCTTAATATTTGCAGGGGATATCTGCTCGAGCGCACAGTCATaGTGGAAAGTGGCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: ASMSMWYTFFLIFAGDICSSAQS*WKVAGA
Trigger: GGCACCAGCCACTTTCCACCATGACTGTGCGCTCGA...GCAGATATCCCCTGCAAATATTAAGAAGAAGGTGTACCACATGGACATGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CCA 90 bp AACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGAGACACGCTCACCTTTGGGATGCAGTGGAGACTaGGGCTGTCTTGATCCTTCT +
Preference number: 2 (lower is better)
Translates to: NLMSPCLPPLSSETRSPLGCSGD*GCLDPS
Trigger: AGAAGGATCAAGACAGCCCCAGTCTCCACTGCATCC...CAAAGGTGAGCGTGTCTCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR CCA 90 bp CTCAGCCTTAGGCTGGAAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCTTTCATGCAGATCACTaGCATGTCAGTGACATATCT +
Preference number: 2 (lower is better)
Translates to: LSLRLEARMGAIPEEENRFHADH*HVSDIS
Trigger: AGATATGTCACTGACATGCCAGTGATCTGCATGAAA...GCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTTCCAGCCTAAGGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR GCA 90 bp CAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGTTCGTGTTCATGGTATaGTGGTCCTGGAGCATCTGT +
Preference number: 2 (lower is better)
Translates to: QPETLQAVNVFQEDVEVLFVFMV*WSWSIC
Trigger: ACAGATGCTCCAGGACCAGCATACCATGAACACGAA...CAGAACCTCTACATCTTCCTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 90 bp ACACCTACTAAGTGCCAGGTGCCAATCACAGCTATCTCGGCATGTTaGCTCCCAAAGGACACAGACAACACTCAGAGGGTTCTAAAACTG +
Preference number: 2 (lower is better)
Translates to: TPTKCQVPITAISAC*LPKDTDNTQRVLKL
Trigger: CAGTTTTAGAACCCTCTGAGTGTTGTCTGTGTCCTTTGGGAGCAAACATGCCGAGATAGCTGTGATTGGCACCTGGCACTTAGTAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR GCA 90 bp GCCTCCATGTCCATGTGGTACACCTTCTTCTTAATATTTGCAGGGGATATCTGCAGTGGCGAGAACAACTaGTCCTCCTTCATCGGTTCC +
Preference number: 2 (lower is better)
Translates to: ASMSMWYTFFLIFAGDICSGENN*SSFIGS
Trigger: GGAACCGATGAAGGAGGAGCAGTTGTTCTCGCCACT...GCAGATATCCCCTGCAAATATTAAGAAGAAGGTGTACCACATGGACATGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR GCA 90 bp CATTTCTTAGGAAACCTGCGATCTACTAAGGGTAAAAGCACAGGCTCAAGGCTCAGCTCTTTGGTCGCCTaGATTTGCAGGTGCCTGTAT +
Preference number: 2 (lower is better)
Translates to: HFLGNLRSTKGKSTGSRLSSLVA*ICRCLY
Trigger: ATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCT...GAGCCTTGAGCCTGTGCTTTTACCCTTAGTAGATCGCAGGTTTCCTAAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR GCA 90 bp GCCTCCATGTCCATGTGGTACACCTTCTTCTTAATATTTGCAGGGGATATCTGCCCTAAGATCTCTACCTaGTTCAGCAGAGCATCCCTC +
Preference number: 2 (lower is better)
Translates to: ASMSMWYTFFLIFAGDICPKIST*FSRASL
Trigger: GAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGG...GCAGATATCCCCTGCAAATATTAAGAAGAAGGTGTACCACATGGACATGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CCA 90 bp AACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGAGACACGCTCACCTTTGTTAAAATGTAGAGTTTaGGGACTGCAGGAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: NLMSPCLPPLSSETRSPLLKCRV*GLQEGS
Trigger: GCTTCCCTCCTGCAGTCCCCAAACTCTACATTTTAA...CAAAGGTGAGCGTGTCTCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR TCA 90 bp AGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAATTGAGAATCACTGGCTaGGGGATGCAGTGGAGACTG +
Preference number: 2 (lower is better)
Translates to: SVSQSSRSTQQPPEGFFKLRITG*GMQWRL
Trigger: CAGTCTCCACTGCATCCCTCAGCCAGTGATTCTCAA...TTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
3UTR-3UTR TCA 90 bp TCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCTGGGAACCTGCATTTTaGCCAAGTTCTCTGTGGGTT +
Preference number: 2 (lower is better)
Translates to: SQSSRSTQQPPEGFFKSTWEPAF*PSSLWV
Trigger: AACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCA...GGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
3UTR-3UTR CCA 90 bp CATTTCTTAGGAAACCTGCGATCTACTAAGGGTAAAAGCACAGGCTCAAGGCTCATCAGGAGAAGGTCATaGTACCTTCCCCCTAAGATC +
Preference number: 2 (lower is better)
Translates to: HFLGNLRSTKGKSTGSRLIRRRS*YLPPKI
Trigger: GATCTTAGGGGGAAGGTACCATGACCTTCTCCTGAT...GAGCCTTGAGCCTGTGCTTTTACCCTTAGTAGATCGCAGGTTTCCTAAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR TCA 90 bp ACACCGTCTATATTTGAACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGAGTTCTAAAACTGAGTTaGGGAGGTGTGGGTTTCAGC +
Preference number: 2 (lower is better)
Translates to: TPSIFEPHVSMSSTFVLRVLKLS*GGVGFS
Trigger: GCTGAAACCCACACCTCCTCAACTCAGTTTTAGAAC...TCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTTCAAATATAGACGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR TCA 90 bp CAAGATGAATCTCTTCTTGCCCTTTGGATCTCTCTGCTGAGATTTGGCATTTTCATTGTCCAAAATGTCTaGGAGCTGGGTAGAAATATC +
Preference number: 2 (lower is better)
Translates to: QDESLLALWISLLRFGIFIVQNV*ELGRNI
Trigger: GATATTTCTACCCAGCTCTCAGACATTTTGGACAAT...GAAAATGCCAAATCTCAGCAGAGAGATCCAAAGGGCAAGAAGAGATTCATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp CGCGCCCAGCTCCATGGTGGTGGTGGTGAGCTCCAGTaGTTTGCTGCGCAGGTAGTGGGGCAGCCTCAACTC +
Preference number: 3 (lower is better)
Translates to: RAQLHGGGGELQ*FAAQVVGQPQL
Trigger: GAGTTGAGGCTGCCCCACTACCTGCGCAGCAAAGCACTGGAGCTCACCACCACCACCATGGAGCTGGGCGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CAA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCACAGATTTCTTGGGCTTaGTGGGAACTCGGCGGGTCC +
Preference number: 3 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSQISWA*WELGGS
Trigger: GGACCCGCCGAGTTCCCACAAAGCCCAAGAAATCTG...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp CAGTGCCAAGAGCCGGGCCATCTGCAGGGGCACACATaGCCGGTGCCTAGACAGAAAGGGCTGCTTGTAGGT +
Preference number: 3 (lower is better)
Translates to: QCQEPGHLQGHT*PVPRQKGLLVG
Trigger: ACCTACAAGCAGCCCTTTCTGTCTAGGCACCGGGCATGTGTGCCCCTGCAGATGGCCCGGCTCTTGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp AGGCCCCTTAAGCACAGTGCCAAGAGCCGGGCCATCTaGAGGGGCACACATGCCCGGTGCCTAGACAGAAAG +
Preference number: 3 (lower is better)
Translates to: RPLKHSAKSRAI*RGTHARCLDRK
Trigger: CTTTCTGTCTAGGCACCGGGCATGTGTGCCCCTGCAGATGGCCCGGCTCTTGGCACTGTGCTTAAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp GGCTCTCTCCGTGGGCTCTCCTGCTCCTTTTCTAGCTaGACCCATCTCCGCTGTTGCTCCCTGGCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: GSLRGLSCSFSS*THLRCCSLARS
Trigger: AGACCTGGCCAGGGAGCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCAGGAGAGCCCACGGAGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CAA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAAGGCTCCTGTTCTCCTaGTGTTGGAGGATCAAGGCC +
Preference number: 3 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSRLLFS*CWRIKA
Trigger: GGCCTTGATCCTCCAACACAAGGAGAACAGGAGCCT...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp TCCCCTAGCTGCTCTGGCTCTCTCCGTGGGCTCTCCTaGTCCTTTTCTAGCTGGACCCATCTCCGCTGTTGC +
Preference number: 3 (lower is better)
Translates to: SPSCSGSLRGLS*SFSSWTHLRCC
Trigger: GCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCAGGAGAGCCCACGGAGAGAGCCAGAGCAGCTAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp GCGACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTaGTGCCCTGCAGCTATAGCACCACTGTCCCGTATC +
Preference number: 3 (lower is better)
Translates to: ATLERTVMVESG*CPAAIAPLSRI
Trigger: GATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp ATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAAGTaGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCG +
Preference number: 3 (lower is better)
Translates to: ICDPRAHSHGGK*LVPCSYSTTVP
Trigger: CGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp ATCTCCCGGCCGAATTCCTCCTCCCAGGGCTCCTCTTaGCTCTCAGAGGTCACCTGCCTGGAGCTCTCTAGA +
Preference number: 3 (lower is better)
Translates to: ISRPNSSSQGSS*LSEVTCLELSR
Trigger: TCTAGAGAGCTCCAGGCAGGTGACCTCTGAGAGCCAAGAGGAGCCCTGGGAGGAGGAATTCGGCCGGGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp GGCAGGCTGCTGGGTACTAGGAGACATGGGCAAGTGTaGCCTCCTGCTTTGGTGAGCAGATTGGGTCCGGCT +
Preference number: 3 (lower is better)
Translates to: GRLLGTRRHGQV*PPALVSRLGPA
Trigger: AGCCGGACCCAATCTGCTCACCAAAGCAGGAGGCCACACTTGCCCATGTCTCCTAGTACCCAGCAGCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp TCCCCCTTGCTGAACATGGTAGAGTCCAGGAGCTCCTaGAGCATGGACGTCACCTCCGAGGCCTTCGTGTTC +
Preference number: 3 (lower is better)
Translates to: SPLLNMVESRSS*SMDVTSEAFVF
Trigger: GAACACGAAGGCCTCGGAGGTGACGTCCATGCTGCAGGAGCTCCTGGACTCTACCATGTTCAGCAAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp CTCCTGCTCTCAAGGACCTCCATGAACTGCTGGAAGTaGAGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTGC +
Preference number: 3 (lower is better)
Translates to: LLLSRTSMNCWK*SLWLLSSLVAC
Trigger: GCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGCACTTCCAGCAGTTCATGGAGGTCCTTGAGAGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp TCCTGCTCCTTTTCTAGCTGGACCCATCTCCGCTGTTaGTCCCTGGCCAGGTCTTCCAGATTCCACTGCCGC +
Preference number: 3 (lower is better)
Translates to: SCSFSSWTHLRC*SLARSSRFHCR
Trigger: GCGGCAGTGGAATCTGGAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp CGAGAGGCTGGAAACAGCCCAGGGCCAGCACAGCTGTaGTGTGCATGTGTCCTGCATCATGATGCCAACTCC +
Preference number: 3 (lower is better)
Translates to: REAGNSPGPAQL*CACVLHHDANS
Trigger: GGAGTTGGCATCATGATGCAGGACACATGCACAGCACAGCTGTGCTGGCCCTGGGCTGTTTCCAGCCTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR CAA 90 bp TCTCCTGCTCCTTTTCTAGCTGGACCCATCTCCGCTGTTGCTCCCTGGCCAGGTTGCAGGTGCCTGTATTaGGTCTCCAGGCTCCTGTTC +
Preference number: 3 (lower is better)
Translates to: SPAPFLAGPISAVAPWPGCRCLY*VSRLLF
Trigger: GAACAGGAGCCTGGAGACCAAATACAGGCACCTGCA...ACCTGGCCAGGGAGCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR TCA 72 bp CTAGGAGACATGGGCAAGTGTGGCCTCCTGCTTTGGTaGGCAGATTGGGTCCGGCTTGGGGCAGGCACTAAT +
Preference number: 3 (lower is better)
Translates to: LGDMGKCGLLLW*ADWVRLGAGTN
Trigger: ATTAGTGCCTGCCCCAAGCCGGACCCAATCTGCTCACCAAAGCAGGAGGCCACACTTGCCCATGTCTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp CGAGCGCACAGTCATGGTGGAAAGTGGCTGGTGCCCTaGAGCTATAGCACCACTGTCCCGTATCATGGCCAT +
Preference number: 3 (lower is better)
Translates to: RAHSHGGKWLVP*SYSTTVPYHGH
Trigger: ATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp ACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTGGTaGCCTGCAGCTATAGCACCACTGTCCCGTATCATG +
Preference number: 3 (lower is better)
Translates to: TLERTVMVESGW*PAAIAPLSRIM
Trigger: CATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp CTCAAGGCTCTCAGTGTCCTTGCTGCCGAACACATCTaGGACCCTCGAGCGCACAGTCATGGTGGAAAGTGG +
Preference number: 3 (lower is better)
Translates to: LKALSVLAAEHI*DPRAHSHGGKW
Trigger: CCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp AGGGTAAAAGCACAGGCTCAAGGCTCTCAGTGTCCTTaGTGCCGAACACATCTGCGACCCTCGAGCGCACAG +
Preference number: 3 (lower is better)
Translates to: RVKAQAQGSQCP*CRTHLRPSSAQ
Trigger: CTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCTTGAGCCTGTGCTTTTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp AGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTGCATTTaGAGGTGCCTGTATTTGGTCTCCAGGCTCCTGTTC +
Preference number: 3 (lower is better)
Translates to: SLWLLSSLVACI*RCLYLVSRLLF
Trigger: GAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp AAGTGCAGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTaGATTTGCAGGTGCCTGTATTTGGTCTCCAGGCTC +
Preference number: 3 (lower is better)
Translates to: KCSLWLLSSLVA*ICRCLYLVSRL
Trigger: GAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp GTAAAAGCACAGGCTCAAGGCTCTCAGTGTCCTTGCTaGCGAACACATCTGCGACCCTCGAGCGCACAGTCA +
Preference number: 3 (lower is better)
Translates to: VKAQAQGSQCPC*RTHLRPSSAQS
Trigger: TGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCTTGAGCCTGTGCTTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp GCAGCATGGACGTCACCTCCGAGGCCTTCGTGTTCATaGTATGCTGGTCCTGGAGCATCTGTTCTGGGCTTA +
Preference number: 3 (lower is better)
Translates to: AAWTSPPRPSCS*YAGPGASVLGL
Trigger: TAAGCCCAGAACAGATGCTCCAGGACCAGCATACCATGAACACGAAGGCCTCGGAGGTGACGTCCATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp ACCAGCTGTTCACACCCCACATCCTCCTCAGCTTTCTaGAGTCTCAGCCTTAGGCTGGAAGCAAGGATGGGC +
Preference number: 3 (lower is better)
Translates to: TSCSHPTSSSAF*SLSLRLEARMG
Trigger: GCCCATCCTTGCTTCCAGCCTAAGGCTGAGACTCCAGAAAGCTGAGGAGGATGTGGGGTGTGAACAGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR CAA 90 bp CAGCTTTCTGGAGTCTCAGCCTTAGGCTGGAAGCAAGGATGGGCGCCATTCCTGCCATGTCTTCCACCTTaGTCCTCAGAGACACGCTCA +
Preference number: 3 (lower is better)
Translates to: QLSGVSALGWKQGWAPFLPCLPP*SSETRS
Trigger: TGAGCGTGTCTCTGAGGACAAAGGTGGAAGACATGG...CAGGAATGGCGCCCATCCTTGCTTCCAGCCTAAGGCTGAGACTCCAGAAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR GCA 72 bp TGGCTGCTGAGCTCTTTGGTCGCCTGCATTTGCAGGTaGCTGTATTTGGTCTCCAGGCTCCTGTTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: WLLSSLVACICR*LYLVSRLLFSL
Trigger: CAAGGAGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp CATCCTCCTCAGCTTTCTGGAGTCTCAGCCTTAGGCTaGAAGCAAGGATGGGCGCCATTCCTGAGGAAGAGA +
Preference number: 3 (lower is better)
Translates to: HPPQLSGVSALG*KQGWAPFLRKR
Trigger: TCTCTTCCTCAGGAATGGCGCCCATCCTTGCTTCCAGCCTAAGGCTGAGACTCCAGAAAGCTGAGGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR TCA 72 bp ACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTaGGAATCACTGGCTGAGGGATGCAGTGGAGACTGG +
Preference number: 3 (lower is better)
Translates to: TKFSVGFRPSEG*ESLAEGCSGDW
Trigger: CCAGTCTCCACTGCATCCCTCAGCCAGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
3UTR GCA 72 bp AGAAGGTCATGGTACCTTCCCCCTAAGATCTCTACCTaGTTCAGCAGAGCATCCCTCCTGCTCTCAAGGACC +
Preference number: 3 (lower is better)
Translates to: RRSWYLPPKIST*FSRASLLLSRT
Trigger: GGTCCTTGAGAGCAGGAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAGGTACCATGACCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp ACCTGGGGAGTCAACAGAAACCTCAGCCAGGTCTTCTaGCTGACCTGTAGCATTCTGAGCCTTCTTCAGCTG +
Preference number: 3 (lower is better)
Translates to: TWGVNRNLSQVF*LTCSILSLLQL
Trigger: CAGCTGAAGAAGGCTCAGAATGCTACAGGTCAGGCAGAAGACCTGGCTGAGGTTTCTGTTGACTCCCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp GCTCTTTGGTCGCCTGCATTTGCAGGTGCCTGTATTTaGTCTCCAGGCTCCTGTTCTCCTTGTGTTGGAGGA +
Preference number: 3 (lower is better)
Translates to: ALWSPAFAGACI*SPGSCSPCVGG
Trigger: TCCTCCAACACAAGGAGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CAA 90 bp TATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGTCTGCAGACCCAGGTaGCTGAATATCCCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: YLSSNPLGFTAWPVQAFFVCRPR*LNIPGP
Trigger: AGGCCCTGGGATATTCAGCAACCTGGGTCTGCAGAC...AAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CAA 90 bp TGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTTGCCAGAAGGTGCGTTaGGACACTTGTGACCTTTTC +
Preference number: 3 (lower is better)
Translates to: CRRSKSSITRASSATRPLCQKVR*DTCDLF
Trigger: GAAAAGGTCACAAGTGTCCAAACGCACCTTCTGGCA...AAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR TCA 72 bp CTGCAGGCAACTTGCATTTCTTTGGCTTTGGCGAGGTaGCCTCAGGGATGTTCAGGTGAACGTTCCACTCCA +
Preference number: 3 (lower is better)
Translates to: LQATCISLALAR*PQGCSGERSTP
Trigger: TGGAGTGGAACGTTCACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTGCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp TCAGAGGTCACCTGCCTGGAGCTCTCTAGAGACAGCTaGTTGCTACAGTGGAACTTAATTTGGAGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: SEVTCLELSRDS*LLQWNLIWSPP
Trigger: GGGAGGACTCCAAATTAAGTTCCACTGTAGCAAGCAGCTGTCTCTAGAGAGCTCCAGGCAGGTGACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp AGTGCCAGGTGCCAATCACAGCTATCTCGGCATGTTTaGTCCCAAAGGACACAGACAACACTCAGAGGGTTC +
Preference number: 3 (lower is better)
Translates to: SARCQSQLSRHV*SQRTQTTLRGF
Trigger: GAACCCTCTGAGTGTTGTCTGTGTCCTTTGGGAGCAAACATGCCGAGATAGCTGTGATTGGCACCTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CCA 72 bp TGGAACTCCAAGGCCTGCTTCATCAGGAGAAGGTCATaGTACCTTCCCCCTAAGATCTCTACCTGCTTCAGC +
Preference number: 3 (lower is better)
Translates to: WNSKACFIRRRS*YLPPKISTCFS
Trigger: GCTGAAGCAGGTAGAGATCTTAGGGGGAAGGTACCATGACCTTCTCCTGATGAAGCAGGCCTTGGAGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp GCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTaGTTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGT +
Preference number: 3 (lower is better)
Translates to: ADSFVGSWHSFL*FAEALTGPSGS
Trigger: ACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
3UTR-3UTR CAA 90 bp TTTGTCCTCAGAGACACGCTCACCTTTGCCTCCCACCTTATGACACCTGGCTCTGGTTCTAAAACTGAGTaGAGGAGGTGTGGGTTTCAG +
Preference number: 3 (lower is better)
Translates to: FVLRDTLTFASHLMTPGSGSKTE*RRCGFQ
Trigger: CTGAAACCCACACCTCCTCAACTCAGTTTTAGAACC...AGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR TCA 72 bp AAGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTaGCCATCAGCCTCGCACCTTACTGGGCCTTCAGGA +
Preference number: 3 (lower is better)
Translates to: KPGERFIGENPH*PSASHLTGPSG
Trigger: TCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
3UTR TCA 72 bp TCCTCAGAGACACGCTCACCTTTGCCTCCCACCTTATaGCACCTGGCTCTGGTCTGTATTTGGTATCTCCTT +
Preference number: 3 (lower is better)
Translates to: SSETRSPLPPTL*HLALVCIWYLL
Trigger: AAGGAGATACCAAATACAGACCAGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR TCA 72 bp CCAGAGACGGCCTCCTTAGCCCACACCGTCTATATTTaGACCTCATGTCTCCATGTCTTCCACCTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: PETASLAHTVYI*TSCLHVFHLCP
Trigger: AGGACAAAGGTGGAAGACATGGAGACATGAGGTTCAAATATAGACGGTGTGGGCTAAGGAGGCCGTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR GCA 72 bp TTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATaGTTGCCAGAGAGCTCGCTAGAGGACGTGCAGAAG +
Preference number: 3 (lower is better)
Translates to: LPKQEKNVRHSA*LPESSLEDVQK
Trigger: CTTCTGCACGTCCTCTAGCGAGCTCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
3UTR CCA 72 bp CTGTATTTGGTCTCCAGGCTCCTGTTCTCCTTGTGTTaGAGGATCAAGGCCTTGTTGAGGTTCTCCACCACA +
Preference number: 3 (lower is better)
Translates to: LYLVSRLLFSLC*RIKALLRFSTT
Trigger: TGTGGTGGAGAACCTCAACAAGGCCTTGATCCTCCAACACAAGGAGAACAGGAGCCTGGAGACCAAATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CAA 90 bp TCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGTCTTCCTGGAAGCGGTaGATGACACAATTGACATTG +
Preference number: 3 (lower is better)
Translates to: SNPLGFTAWPVQAFFAFKSSWKR*MTQLTL
Trigger: CAATGTCAATTGTGTCATCAACCGCTTCCAGGAAGA...CTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR-3UTR CAA 90 bp AGCCTCCGTTTCTTTCATGATTTGTACATGGTTGATCGCTTCTTGCCGGAGGCTAGGATCAAGGCCTTGTaGAGGTTCTCCACCACAGTG +
Preference number: 3 (lower is better)
Translates to: SLRFFHDLYMVDRFLPEARIKAL*RFSTTV
Trigger: CACTGTGGTGGAGAACCTCAACAAGGCCTTGATCCT...AGCCTCCGGCAAGAAGCGATCAACCATGTACAAATCATGAAAGAAACGGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR GCA 72 bp TTTCTCCGTCACTTCAATCCATTCGTCCAGAGCTGCTaGTTCCTCTTCACTCTTCCTGGGCCCAATCTCATA +
Preference number: 3 (lower is better)
Translates to: FLRHFNPFVQSC*FLFTLPGPNLI
Trigger: TATGAGATTGGGCCCAGGAAGAGTGAAGAGGAAGCAGCAGCTCTGGACGAATGGATTGAAGTGACGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR TCA 72 bp GGTTTCTTTAAAAGCACCAGCTGGGAACCTGCATTTTaGCCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: GFFKSTSWEPAF*PSSLWVSVPQK
Trigger: CTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAAAGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
3UTR GCA 72 bp TGGTACACCTTCTTCTTAATATTTGCAGGGGATATCTaGAAAGAGGGCCAGGTCAGCCTTCGGATGGATGTC +
Preference number: 3 (lower is better)
Translates to: WYTFFLIFAGDI*KEGQVSLRMDV
Trigger: GACATCCATCCGAAGGCTGACCTGGCCCTCTTTGCAGATATCCCCTGCAAATATTAAGAAGAAGGTGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp GCTCACCTTTGCCTCCCACCTTATGACACCTGGCTCTaGTCTGTATTTGGTATCTCCTTTTGTTCTCACCTT +
Preference number: 3 (lower is better)
Translates to: AHLCLPPYDTWL*SVFGISFCSHL
Trigger: AAGGTGAGAACAAAAGGAGATACCAAATACAGACCAGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CCA 72 bp AGACACGCTCACCTTTGCCTCCCACCTTATGACACCTaGCTCTGGTCTGTATTTGGTATCTCCTTTTGTTCT +
Preference number: 3 (lower is better)
Translates to: RHAHLCLPPYDT*LWSVFGISFCS
Trigger: AGAACAAAAGGAGATACCAAATACAGACCAGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR CAA 90 bp GGAAGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCATGACACAATTGACATaGTCCAAAATGTCTGAGAGC +
Preference number: 3 (lower is better)
Translates to: GSSPPGLCLCGLSFLPPVMTQLT*SKMSES
Trigger: GCTCTCAGACATTTTGGACAATGTCAATTGTGTCAT...GACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR TCA 72 bp ATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCTaGGGATGGGGTAATTTCCTATTTGTATGCCTGTTC +
Preference number: 3 (lower is better)
Translates to: IPEEENRWTWVL*GWGNFLFVCLF
Trigger: GAACAGGCATACAAATAGGAAATTACCCCATCCTCAGAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR-3UTR CAA 90 bp ATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTCGGTTGATGACACAATaGACATTGTCCAAAATGTCT +
Preference number: 3 (lower is better)
Translates to: IFVFQPSWLHSLARAGFLRLMTQ*TLSKMS
Trigger: AGACATTTTGGACAATGTCAATTGTGTCATCAACCG...AAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CCA 72 bp ATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTaGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGATG +
Preference number: 3 (lower is better)
Translates to: IYLSSNPLGFTA*PVQAFFAFKKM
Trigger: CATCTTCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
3UTR TCA 72 bp GACACAGACAACACTCAGAGGGTTCTAAAACTGAGTTaGGGAGGTGTGGGTTTCAGCAATGAGACAGAATTT +
Preference number: 3 (lower is better)
Translates to: DTDNTQRVLKLS*GGVGFSNETEF
Trigger: AAATTCTGTCTCATTGCTGAAACCCACACCTCCTCAACTCAGTTTTAGAACCCTCTGAGTGTTGTCTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR TCA 72 bp GGTCTGTATTTGGTATCTCCTTTTGTTCTCACCTTCTaGGCTTTCATGCAGATCACTGGCATGTCAGTGACA +
Preference number: 3 (lower is better)
Translates to: GLYLVSPFVLTF*AFMQITGMSVT
Trigger: TGTCACTGACATGCCAGTGATCTGCATGAAAGCTCAGAAGGTGAGAACAAAAGGAGATACCAAATACAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CCA 72 bp TTTTGTTCTCACCTTCTGAGCTTTCATGCAGATCACTaGCATGTCAGTGACATATCTGTCCATATTTTGATT +
Preference number: 3 (lower is better)
Translates to: FCSHLLSFHADH*HVSDISVHILI
Trigger: AATCAAAATATGGACAGATATGTCACTGACATGCCAGTGATCTGCATGAAAGCTCAGAAGGTGAGAACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAAGGGCTGCTTGTAGGTaGGGCCACTGGGGCGGATGT +
Preference number: 4 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSRAACR*GHWGGC
Trigger: ACATCCGCCCCAGTGGCCCCACCTACAAGCAGCCCT...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GTCCCGTATCATGGCCATGGGACTTGGGGGAAGTGGCGAGAACAACTGCTCCTCTCCTCCAGCCACAGCTaGCTCCGCATCTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: VPYHGHGTWGKWREQLLLSSSHS*LRISRP
Trigger: CGGCCGGGAGATGCGGAGGCAGCTGTGGCTGGAGGA...GAGGAGCAGTTGTTCTCGCCACTTCCCCCAAGTCCCATGGCCATGATACGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp TTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGGGGTGTCCCCTCAGCTaGTCCCGGGGAAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FAEALTGPSGSSGFCGRRGCPLS*SRGRLA
Trigger: TGCCAGCCTTCCCCGGGACCAGCTGAGGGGACACCC...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCATCTCAGTGTCCTTGCTaGCGAACACATCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSSQCPC*RTHLRP
Trigger: GGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGA...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TCAGTGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGTCCTCCAGCCCCTTCTaGTTGTCCGTCCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SVSLLPNTSATLERTVMVSSSPF*LSVQAC
Trigger: GCAGGCCTGGACGGACAAGCAGAAGGGGCTGGAGGA...CACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCACACTGTCCCGTATCATaGCCATGGGACTTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSHCPVS*PWDLGE
Trigger: TTCCCCCAAGTCCCATGGCCATGATACGGGACAGTG...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GTCCCGTATCATGGCCATGGGACTTGGGGGAAGTGGCGAGAACAACTGCTCCTCCCCAGGGCAGGCTGCTaGGTACTAGGAGACATGGGC +
Preference number: 4 (lower is better)
Translates to: VPYHGHGTWGKWREQLLLPRAGC*VLGDMG
Trigger: GCCCATGTCTCCTAGTACCCAGCAGCCTGCCCTGGG...GAGGAGCAGTTGTTCTCGCCACTTCCCCCAAGTCCCATGGCCATGATACGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCATGCAGGTTCTTCCTCTaGGCCTCCATGTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSCRFFL*ASMSMW
Trigger: CCACATGGACATGGAGGCCCAGAGGAAGAACCTGCA...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCATGTAGGTGGGGCCACTaGGGCGGATGTGCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: DHQPRTLLGLQEVQAFVACRWGH*GGCAGV
Trigger: CACCCCGGCACATCCGCCCCAGTGGCCCCACCTACA...TGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp TTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGTGCCGCAGCTTCTCCTaGTGCTCCTGCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FAEALTGPSGSSGFCGRRCRSFS*CSCSSR
Trigger: CCTGCTGGAGCAGGAGCATCAGGAGAAGCTGCGGCA...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp ACGTGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCTGCCGCAGCTTCTCCTaGTGCTCCTGCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TCRRSKSSITRASSATRPCRSFS*CSCSSR
Trigger: CCTGCTGGAGCAGGAGCATCAGGAGAAGCTGCGGCA...GGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGTCCAGGCCTGCAGCCTaGGACTCTGCAGGCGGTCAA +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRSRPAA*DSAGGQ
Trigger: TTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGA...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp ACGTGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCTCCAGGCCTGCAGCCTaGGACTCTGCAGGCGGTCAA +
Preference number: 4 (lower is better)
Translates to: TCRRSKSSITRASSATRPSRPAA*DSAGGQ
Trigger: TTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGA...GGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp ACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGCGGATGTGCCGGGGTaGGGCTGCAGGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: TISLAPYWAFRKFRLLWQADVPG*GCRQLA
Trigger: TGCAAGTTGCCTGCAGCCTCACCCCGGCACATCCGC...CTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAACTCCTGGGTACCCTCTaGCCAGGCACAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CPCCRTHLRPSSAQSWWKLLGTL*PGTAPL
Trigger: CAGAGGAGCTGTGCCTGGGCAGAGGGTACCCAGGAG...TTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp CTGAGGGATGCAGTGGAGACTGGGGCTGTCTTGATCCTTCTGGCTTATTTGGGTTCCTCCAGCCACAGCTaGCTCCGCATCTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: LRDAVETGAVLILLAYLGSSSHS*LRISRP
Trigger: CGGCCGGGAGATGCGGAGGCAGCTGTGGCTGGAGGA...ACCCAAATAAGCCAGAAGGATCAAGACAGCCCCAGTCTCCACTGCATCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp TTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGGCTCCAGTGCTTTGCTaGGCAGGTAGTGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FAEALTGPSGSSGFCGRRAPVLC*AGSGAA
Trigger: GGCTGCCCCACTACCTGCGCAGCAAAGCACTGGAGC...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp CTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGTTGTCCGTCCAGGCCTaGAGCCTGAGACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LVRPGLQPETLQAVNVFQLSVQA*SLRLCR
Trigger: CCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAA...CTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TCTCCTGCTCCTTTTCTAGCTGGACCCATCTCCGCTGTTGCTCCCTGGCCAGGTGGCACACATGCCCGGTaGCTAGACAGAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPAPFLAGPISAVAPWPGGTHAR*LDRKGC
Trigger: GCAGCCCTTTCTGTCTAGGCACCGGGCATGTGTGCC...ACCTGGCCAGGGAGCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGGGGTGTCCCCTCAGCTaGTCCCGGGGAAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RRSKSSITRASSATRPLKGCPLS*SRGRLA
Trigger: TGCCAGCCTTCCCCGGGACCAGCTGAGGGGACACCC...CTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS-3UTR CCA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCACTTGGCTTCACAGCTTaGCCCGTGCAGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSLGFTA*PVQAFF
Trigger: AAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAG...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCACTCTTTTGGTGGCAATaGGGGACAGCGGTAACACTT +
Preference number: 4 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSLFWWQ*GTAVTL
Trigger: AAGTGTTACCGCTGTCCCTCATTGCCACCAAAAGAG...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp AGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCAGGCCTCCTGCTTTGGTaGGCAGATTGGGTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SPPSPEQVQPPGPLSTVPGLLLW*ADWVRL
Trigger: AAGCCGGACCCAATCTGCTCACCAAAGCAGGAGGCC...TGGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp TCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGGCGGATGTGCCGGGGTaGGGCTGCAGGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: SNPLGFTAWPVQAFFAFKADVPG*GCRQLA
Trigger: TGCAAGTTGCCTGCAGCCTCACCCCGGCACATCCGC...CTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR TCA 90 bp TGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAATCAGGGGCTACCTCTTaGGCCCGAGTTAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: CPCCRTHLRPSSAQSWWKSGATS*ARVSWA
Trigger: TGCCCAGCTAACTCGGGCTCAAGAGGTAGCCCCTGA...TTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GAAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCCTTCCCTGCCAGCCCTaGCAGAAGGTGCGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: EARMGAIPEEENRWTWVLLPCQP*QKVRLD
Trigger: GTCCAAACGCACCTTCTGGCAGGGCTGGCAGGGAAG...GAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp CAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGAGAGTCCAGGAGCTCCTaGAGCATGGACGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: QPRTLLGLQEVQAFVAGGESRSS*SMDVTS
Trigger: GGAGGTGACGTCCATGCTGCAGGAGCTCCTGGACTC...TCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GTGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTGCTGCCGAACACATCTaGGACCCTCGAGCGCACAGT +
Preference number: 4 (lower is better)
Translates to: VQKVKVLHHQSKFSHQAPAAEHI*DPRAHS
Trigger: ACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGC...AGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGAGGGCCCACTTCTTCTaGCGCTGCTGCCACATCTCC +
Preference number: 4 (lower is better)
Translates to: FAEALTGPSGSSGFCGRRRAHFF*RCCHIS
Trigger: GGAGATGTGGCAGCAGCGGCAGAAGAAGTGGGCCCT...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp TCTCCTGCTCCTTTTCTAGCTGGACCCATCTCCGCTGTTGCTCCCTGGCCAGGTCTCCGTGGGCTCTCCTaGTCCTTTTCTAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: SPAPFLAGPISAVAPWPGLRGLS*SFSSWT
Trigger: GGTCCAGCTAGAAAAGGAGCAGGAGAGCCCACGGAG...ACCTGGCCAGGGAGCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp CTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGGGTGGTGAGCTCCAGTaGTTTGCTGCGCAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: LVRPGLQPETLQAVNVFQGGELQ*FAAQVV
Trigger: CACTACCTGCGCAGCAAAGCACTGGAGCTCACCACC...CTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCAAGAGCTTATGGCACAGGTACTaGAGCCTGAGCGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SITRASSATRPLKHSAKSLWHRY*SLSAPS
Trigger: GCTGGGCGCGCTCAGGCTGCAGTACCTGTGCCATAA...GCTCTTGGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGTTGTCCGTCCAGGCCTaGAGCCTGAGACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRLSVQA*SLRLCR
Trigger: CCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAA...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GGCCTCCAGAAAAGAAAGAGCCTGGGACCCGAGAGGCTGGAAACAGCCCAGGGCGCTGTGCATGTGTCCTaGATCATGATGCCAACTCCC +
Preference number: 4 (lower is better)
Translates to: GLQKRKSLGPERLETAQGAVHVS*IMMPTP
Trigger: GGGAGTTGGCATCATGATGCAGGACACATGCACAGC...GCCCTGGGCTGTTTCCAGCCTCTCGGGTCCCAGGCTCTTTCTTTTCTGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp CATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGACACCAGGGTGTCTCCTaGGTACCCTCTGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HQPRTLLGLQEVQAFVAGHQGVS*VPSAQA
Trigger: TGCCTGGGCAGAGGGTACCCAGGAGACACCCTGGTG...TCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp TGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAATCCCAGGGCTCCTCTTaGCTCTCAGAGGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: CPCCRTHLRPSSAQSWWKSQGSS*LSEVTC
Trigger: GCAGGTGACCTCTGAGAGCCAAGAGGAGCCCTGGGA...TTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp TCTCCTGCTCCTTTTCTAGCTGGACCCATCTCCGCTGTTGCTCCCTGGCCAGGTGGAGCTTGGGGAACATaGTCACCATGCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SPAPFLAGPISAVAPWPGGAWGT*SPCCSG
Trigger: GCCTGAGCAGCATGGTGACCATGTTCCCCAAGCTCC...ACCTGGCCAGGGAGCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AGCCCCTTCTGCTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAGCATTTCTTTGGCTTTaGCGAGGTGACCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SPFCLSVQACSLRLCRRSAFLWL*RGDLRD
Trigger: ATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGC...TGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTTGTAGGTGGGGCCACTaGGGCGGATGTGCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: ADSFVGSWHSFLWFAEALCRWGH*GGCAGV
Trigger: CACCCCGGCACATCCGCCCCAGTGGCCCCACCTACA...AAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp ACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGATGTAGGTGGGGCCACTaGGGCGGATGTGCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: TLLASQLGPCRLSLPLRRCRWGH*GGCAGV
Trigger: CACCCCGGCACATCCGCCCCAGTGGCCCCACCTACA...TCTTCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp GACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAAGGGCTGCTTGTAGGTaGGGCCACTGGGGCGGATGT +
Preference number: 4 (lower is better)
Translates to: DHQPRTLLGLQEVQAFVARAACR*GHWGGC
Trigger: ACATCCGCCCCAGTGGCCCCACCTACAAGCAGCCCT...TGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGTGCCAAGAGCCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGATCTGCTTCCCCTGTTaGCGGGCCATCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SAKSLTGPSGSSGFCGRRICFPC*RAICRG
Trigger: GCCCCTGCAGATGGCCCGCCAACAGGGGAAGCAGAT...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGCTCTTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS-3UTR CCA 90 bp AGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGGGTGTCCCCTCAGCTaGTCCCGGGGAAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RIHIDHQPRTLLGLQEVQGCPLS*SRGRLA
Trigger: TGCCAGCCTTCCCCGGGACCAGCTGAGGGGACACCC...CTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCAAGAGCCTTACTGGGCAGCCGGGGAATATCTaGGTGTCCCCTCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RASSATRPLKHSAKSLTGQPGNI*VSPQLV
Trigger: GACCAGCTGAGGGGACACCCAGATATTCCCCGGCTG...CCCAGTAAGGCTCTTGGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS-3UTR TCA 90 bp TCAGTGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGGGATCAAGGCCTTGTTaGGGTTCTCCACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SVSLLPNTSATLERTVMVGSRPC*GSPPQW
Trigger: CCACTGTGGTGGAGAACCTCAACAAGGCCTTGATCC...CACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp CATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGCCTCCTGCTTTGGTaGGCAGATTGGGTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: HQPRTLLGLQEVQAFVAGGLLLW*ADWVRL
Trigger: AAGCCGGACCCAATCTGCTCACCAAAGCAGGAGGCC...TCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp GCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTACAGGTACTGCAGCCTaGGCGCGCCCAGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: AWREIYWGESTLTISLAPTGTAA*ARPAPW
Trigger: CCATGGAGCTGGGCGCGCTCAGGCTGCAGTACCTGT...AGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp TCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGACAGGTACTGCAGCCTaGGCGCGCCCAGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: SFVGSWHSFLWFAEALTGTGTAA*ARPAPW
Trigger: CCATGGAGCTGGGCGCGCTCAGGCTGCAGTACCTGT...CCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp AGGCAACTTGCATTTCTTTGGCTTTGGCGAGGTGACCTCAGGGATGTTCAGGTGACAGGTACTGCAGCCTaGGCGCGCCCAGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RQLAFLWLWRGDLRDVQVTGTAA*ARPAPW
Trigger: CCATGGAGCTGGGCGCGCTCAGGCTGCAGTACCTGT...CACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp CCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGATCCAGGCCTGCAGCCTaGGACTCTGCAGGCGGTCAA +
Preference number: 4 (lower is better)
Translates to: PAGNLHFDQVLCGFPSLRSRPAA*DSAGGQ
Trigger: TTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGA...TCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTCCTGGGTACCCTCTaGCCAGGCACAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRLLGTL*PGTAPL
Trigger: CAGAGGAGCTGTGCCTGGGCAGAGGGTACCCAGGAG...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TCAGTGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGCTCTCAGAGGTCACCTaGCTGGAGCTCTCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: SVSLLPNTSATLERTVMVLSEVT*LELSRD
Trigger: GTCTCTAGAGAGCTCCAGGCAGGTGACCTCTGAGAG...CACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp CTTCCCCCTAAGATCTCTACCTGCTTCAGCAGAGCATCCCTCCTGCTCTCAAGGACATCCTCCCCTAGCTaGTCTGGCTCTCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LPPKISTCFSRASLLLSRTSSPS*SGSLRG
Trigger: CCCACGGAGAGAGCCAGAGCAGCTAGGGGAGGATGT...CCTTGAGAGCAGGAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCGCTCCAGTGCTTTGCTaGGCAGGTAGTGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GESTLTISLAPYWAFRKFAPVLC*AGSGAA
Trigger: GGCTGCCCCACTACCTGCGCAGCAAAGCACTGGAGC...GAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCGCTCCAGTGCTTTGCTaGGCAGGTAGTGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FVFQPSWLHSLARAGFLCAPVLC*AGSGAA
Trigger: GGCTGCCCCACTACCTGCGCAGCAAAGCACTGGAGC...GCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGGGTGGTGAGCTCCAGTaGTTTGCTGCGCAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRGGELQ*FAAQVV
Trigger: CACTACCTGCGCAGCAAAGCACTGGAGCTCACCACC...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp CACAGTGCCAAGAGCCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGGGCACACATGCCCGGTaGCTAGACAGAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HSAKSLTGPSGSSGFCGRGTHAR*LDRKGC
Trigger: GCAGCCCTTTCTGTCTAGGCACCGGGCATGTGTGCC...CCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGCTCTTGGCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS-3UTR GCA 90 bp TCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTCAGACAGCCTCCATCTaGTTCCCCTGTTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SKSSITRASSATRPLKHSQTASI*FPCWRA
Trigger: GGCCCGCCAACAGGGGAAGCAGATGGAGGCTGTCTG...ACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS-3UTR GCA 90 bp TTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGTCACTGGCTGAGGGATaGAGTGGAGACTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FAEALTGPSGSSGFCGRRSLAEG*SGDWGC
Trigger: ACAGCCCCAGTCTCCACTGCATCCCTCAGCCAGTGA...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp GACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCATCCCAGGGCTCCTCTTaGCTCTCAGAGGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: DHQPRTLLGLQEVQAFVASQGSS*LSEVTC
Trigger: GCAGGTGACCTCTGAGAGCCAAGAGGAGCCCTGGGA...TGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTTCCCAGGGCTCCTCTTaGCTCTCAGAGGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: PGIPSFGSLRRLLGLQEVSQGSS*LSEVTC
Trigger: GCAGGTGACCTCTGAGAGCCAAGAGGAGCCCTGGGA...AACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp CCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGCTCTGGCTCTCTCCGTaGGCTCTCCTGCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PSASHLTGPSGSSGFCGRLWLSP*ALLLLF
Trigger: GAAAAGGAGCAGGAGAGCCCACGGAGAGAGCCAGAG...CCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp TCAGTGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGAACTCGGCGGGTCCGTaGTCTGTAGGTAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: SVSLLPNTSATLERTVMVNSAGP*SVGKLH
Trigger: GTGGAGTTTACCTACAGACCACGGACCCGCCGAGTT...CACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp TATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTTGTAGGTGGGGCCACTaGGGCGGATGTGCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: YLSSNPLGFTAWPVQAFFCRWGH*GGCAGV
Trigger: CACCCCGGCACATCCGCCCCAGTGGCCCCACCTACA...AAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp ATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTATCTGCTTCCCCTGTTaGCGGGCCATCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IHIDHQPRTLLGLQEVQAICFPC*RAICRG
Trigger: GCCCCTGCAGATGGCCCGCCAACAGGGGAAGCAGAT...AGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CAGCTGTGCTGTGCATGTGTCCTGCATCATGATGCCAACTCCCCTTCCTCCCACGGCTGGAAGCAAGGATaGGCGCCATTCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QLCCACVLHHDANSPSSHGWKQG*APFLRK
Trigger: CTTCCTCAGGAATGGCGCCCATCCTTGCTTCCAGCC...GTGGGAGGAAGGGGAGTTGGCATCATGATGCAGGACACATGCACAGCACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CAA 72 bp GTGGCCTCCTGCTTTGGTGAGCAGATTGGGTCCGGCTaGGGGCAGGCACTAATGATAGCTCTGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VASCFGEQIGSG*GQALMIALPSP
Trigger: TGGAGAAGGCAGAGCTATCATTAGTGCCTGCCCCAAGCCGGACCCAATCTGCTCACCAAAGCAGGAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGTCTCAAGGACCTCCATaGACTGCTGGAAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRSQGPP*TAGSAA
Trigger: GGCTGCACTTCCAGCAGTTCATGGAGGTCCTTGAGA...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp ACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGCCGCAGCTTCTCCTaGTGCTCCTGCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TLTISLAPYWAFRKFRLLCRSFS*CSCSSR
Trigger: CCTGCTGGAGCAGGAGCATCAGGAGAAGCTGCGGCA...CAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp CTGAGGGATGCAGTGGAGACTGGGGCTGTCTTGATCCTTCTGGCTTATTTGGGTCCATGGTGGTGGTGGTaGGCTCCAGTGCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRDAVETGAVLILLAYLGPWWWW*APVLCC
Trigger: GCAGCAAAGCACTGGAGCTCACCACCACCACCATGG...ACCCAAATAAGCCAGAAGGATCAAGACAGCCCCAGTCTCCACTGCATCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp GAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGTTGGCTTTGGCGAGGTaGCCTCAGGGATGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ESGWCPAAIAPLSRIMAMLALAR*PQGCSG
Trigger: ACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAA...CATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp ACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCGCGGATGTGCCGGGGTaGGGCTGCAGGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: TYIFVFQPSWLHSLARAGADVPG*GCRQLA
Trigger: TGCAAGTTGCCTGCAGCCTCACCCCGGCACATCCGC...GCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR TCA 90 bp CTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTGGCCAAGGGTGCTGGTaGGTGGAGAAGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGTCILTKFSVGFRPSEGGQGCW*VEKDRV
Trigger: CACCCTGTCCTTCTCCACTCACCAGCACCCTTGGCC...ACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp ACGTGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCAGCCCTGCCAGAAGGTaGGTTTGGACACTTGTGACC +
Preference number: 4 (lower is better)
Translates to: TCRRSKSSITRASSATRPSPARR*VWTLVT
Trigger: GGTCACAAGTGTCCAAACGCACCTTCTGGCAGGGCT...GGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCAAGGACCTCCATGAACTaGTGGAAGTGCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPPSPEQVQPPGPLSTVPRTSMN*WKCSLW
Trigger: CCAGAGGCTGCACTTCCAGCAGTTCATGGAGGTCCT...TGGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp ATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTGCTGCCGAACACATCTaGGACCCTCGAGCGCACAGT +
Preference number: 4 (lower is better)
Translates to: IHIDHQPRTLLGLQEVQAAAEHI*DPRAHS
Trigger: ACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGC...AGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp CAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGATCTCAGTGTCCTTGCTaGCGAACACATCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: QPRTLLGLQEVQAFVAGGSQCPC*RTHLRP
Trigger: GGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGA...TCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTCCTCCAGCCACAGCTaGCTCCGCATCTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: WREIYWGESTLTISLAPYSSSHS*LRISRP
Trigger: CGGCCGGGAGATGCGGAGGCAGCTGTGGCTGGAGGA...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp ACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGTTCTTCTGCCGCTGCTaGCACATCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TISLAPYWAFRKFRLLWQFFCRC*HISSSS
Trigger: GGAGGAGGAGGAGATGTGGCAGCAGCGGCAGAAGAA...CTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTAGGGCCCACTTCTTCTaGCGCTGCTGCCACATCTCC +
Preference number: 4 (lower is better)
Translates to: STLTISLAPYWAFRKFRLRAHFF*RCCHIS
Trigger: GGAGATGTGGCAGCAGCGGCAGAAGAAGTGGGCCCT...AAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp CCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGGGCCCACTTCTTCTaGCGCTGCTGCCACATCTCC +
Preference number: 4 (lower is better)
Translates to: PTLLASQLGPCRLSLPLRRAHFF*RCCHIS
Trigger: GGAGATGTGGCAGCAGCGGCAGAAGAAGTGGGCCCT...TCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTACCCATCTCCGCTGTTaGTCCCTGGCCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: STLTISLAPYWAFRKFRLTHLRC*SLARSS
Trigger: GGAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGT...AAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGACATCCTCCCCTAGCTaGTCTGGCTCTCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRTSSPS*SGSLRG
Trigger: CCCACGGAGAGAGCCAGAGCAGCTAGGGGAGGATGT...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GTCCCGTATCATGGCCATGGGACTTGGGGGAAGTGGCGAGAACAACTGCTCCTCTGCAGCCTGAGACTCTaGAGGCGGTCAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VPYHGHGTWGKWREQLLLCSLRL*RRSMFS
Trigger: GGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCA...GAGGAGCAGTTGTTCTCGCCACTTCCCCCAAGTCCCATGGCCATGATACGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTCCTCCAGCCCCTTCTaGTTGTCCGTCCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AWREIYWGESTLTISLAPSSSPF*LSVQAC
Trigger: GCAGGCCTGGACGGACAAGCAGAAGGGGCTGGAGGA...AGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTTCCTCCAGCCCCTTCTaGTTGTCCGTCCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ADSFVGSWHSFLWFAEALSSSPF*LSVQAC
Trigger: GCAGGCCTGGACGGACAAGCAGAAGGGGCTGGAGGA...AAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp GAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGGGAACATGGTCACCATaGTGCTCAGGCACTCTCGGT +
Preference number: 4 (lower is better)
Translates to: ESGWCPAAIAPLSRIMAMGTWSP*CSGTLG
Trigger: ACCGAGAGTGCCTGAGCAGCATGGTGACCATGTTCC...CATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGCAGACAGCCTCCATCTaGTTCCCCTGTTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: RIHIDHQPRTLLGLQEVQQTASI*FPCWRA
Trigger: GGCCCGCCAACAGGGGAAGCAGATGGAGGCTGTCTG...CTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CAGCTGTGCTGTGCATGTGTCCTGCATCATGATGCCAACTCCCCTTCCTCCCACGGGAGTCACCAACTGTaGGGGGTCATCCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: QLCCACVLHHDANSPSSHGSHQL*GVILLH
Trigger: ATGGAGAAGGATGACCCCCCACAGTTGGTGACTCCC...GTGGGAGGAAGGGGAGTTGGCATCATGATGCAGGACACATGCACAGCACAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp GAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGACCTCCATGAACTGCTaGAAGTGCAGCCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ESGWCPAAIAPLSRIMAMTSMNC*KCSLWL
Trigger: CAGCCAGAGGCTGCACTTCCAGCAGTTCATGGAGGT...CATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp CTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGAGTCATGGTGGAAAGTaGCTGGTGCCCTGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: LVRPGLQPETLQAVNVFQSHGGK*LVPCSY
Trigger: ATAGCTGCAGGGCACCAGCCACTTTCCACCATGACT...CTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp CTTCCCCCTAAGATCTCTACCTGCTTCAGCAGAGCATCCCTCCTGCTCTCAAGGCTCTGGCTCTCTCCGTaGGCTCTCCTGCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LPPKISTCFSRASLLLSRLWLSP*ALLLLF
Trigger: GAAAAGGAGCAGGAGAGCCCACGGAGAGAGCCAGAG...CCTTGAGAGCAGGAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTCCCAGGGCAGGCTGCTaGGTACTAGGAGACATGGGC +
Preference number: 4 (lower is better)
Translates to: ADSFVGSWHSFLWFAEALPRAGC*VLGDMG
Trigger: GCCCATGTCTCCTAGTACCCAGCAGCCTGCCCTGGG...AAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGTGCAGGTTCTTCCTCTaGGCCTCCATGTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRCRFFL*ASMSMW
Trigger: CCACATGGACATGGAGGCCCAGAGGAAGAACCTGCA...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGAGCTTGGGGAACATaGTCACCATGCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HQPRTLLGLQEVQAFVAGGAWGT*SPCCSG
Trigger: GCCTGAGCAGCATGGTGACCATGTTCCCCAAGCTCC...TCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGTGCCAAGAGCCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGGGAGCTTGGGGAACATaGTCACCATGCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SAKSLTGPSGSSGFCGRRGAWGT*SPCCSG
Trigger: GCCTGAGCAGCATGGTGACCATGTTCCCCAAGCTCC...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGCTCTTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS-3UTR CCA 90 bp AAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCACTCCAGCTGGAGCTTaGGGAACATGGTCACCATGC +
Preference number: 4 (lower is better)
Translates to: KSSITRASSATRPLKHSATPAGA*GTWSPC
Trigger: GCATGGTGACCATGTTCCCCAAGCTCCAGCTGGAGT...GGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp AGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCAACGTTCCACTCCAGCTaGAGCTTGGGGAACATGGTC +
Preference number: 4 (lower is better)
Translates to: SPPSPEQVQPPGPLSTVPTFHSS*SLGNMV
Trigger: GACCATGTTCCCCAAGCTCCAGCTGGAGTGGAACGT...TGGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp GCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTAGGGCTGCTTGTAGGTaGGGCCACTGGGGCGGATGT +
Preference number: 4 (lower is better)
Translates to: ADSFVGSWHSFLWFAEALRAACR*GHWGGC
Trigger: ACATCCGCCCCAGTGGCCCCACCTACAAGCAGCCCT...AAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp AACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGAGGGCTGCTTGTAGGTaGGGCCACTGGGGCGGATGT +
Preference number: 4 (lower is better)
Translates to: NPLGFTAWPVQAFFAFKKRAACR*GHWGGC
Trigger: ACATCCGCCCCAGTGGCCCCACCTACAAGCAGCCCT...CTTCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp GAAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCTGGCATTCCTTCCTTTaGTTCGCTCCGAGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: EARMGAIPEEENRWTWVLWHSFL*FAPRPS
Trigger: CGAAGGCCTCGGAGCGAACCAAAGGAAGGAATGCCA...GAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CAA 72 bp CAGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTGCATTaGCAGGTGCCTGTATTTGGTCTCCAGGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QPLAAELFGRLH*QVPVFGLQAPV
Trigger: AACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 72 bp ATGGATGTCCCAGTGACAGGAAAGGAGGCAGATTTCTaGGGCTTTGTGGGAACTCGGCGGGTCCGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: MDVPVTGKEADF*GFVGTRRVRGL
Trigger: CAGACCACGGACCCGCCGAGTTCCCACAAAGCCCAAGAAATCTGCCTCCTTTCCTGTCACTGGGACATCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp CTCAGCCTTAGGCTGGAAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCGATGATGGCTTTCACTaGTGTGGGAGTCACCAACTG +
Preference number: 4 (lower is better)
Translates to: LSLRLEARMGAIPEEENRDDGFH*CGSHQL
Trigger: CAGTTGGTGACTCCCACATCAGTGAAAGCCATCATC...GCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTTCCAGCCTAAGGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp GAAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCGCAAAGGGCAGTGAGTaGCTCGATGCCTCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: EARMGAIPEEENRWTWVLAKGSE*LDASFG
Trigger: ACCAAAAGAGGCATCGAGTCACTCACTGCCCTTTGC...GAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp ATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTGCAGCCTCTGGCTGCTaGGCTCTTTGGTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IFVFQPSWLHSLARAGFLAASGC*ALWSPA
Trigger: TGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGC...AAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp CTTCCCCCTAAGATCTCTACCTGCTTCAGCAGAGCATCCCTCCTGCTCTCAAGGTCTCAAGGACCTCCATaGACTGCTGGAAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPPKISTCFSRASLLLSRSQGPP*TAGSAA
Trigger: GGCTGCACTTCCAGCAGTTCATGGAGGTCCTTGAGA...CCTTGAGAGCAGGAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp TTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGGGATGGATGTCCCAGTaGCAGGAAAGGAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: FAEALTGPSGSSGFCGRRGWMSQ*QERRQI
Trigger: AATCTGCCTCCTTTCCTGTCACTGGGACATCCATCC...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp CACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTCCATGGTGGTGGTGGTaGGCTCCAGTGCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HIDHQPRTLLGLQEVQAFPWWWW*APVLCC
Trigger: GCAGCAAAGCACTGGAGCTCACCACCACCACCATGG...AAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp ACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGTTGGCTTTGGCGAGGTaGCCTCAGGGATGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TISLAPYWAFRKFRLLWQLALAR*PQGCSG
Trigger: ACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAA...CTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp GCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCCGTCCCTCAGAAGGTTaGGAATCACTGGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: APAGNLHFDQVLCGFPSLRPSEG*ESLAEG
Trigger: TCCCTCAGCCAGTGATTCTCAACCTTCTGAGGGACG...GAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS-3UTR GCA 90 bp TCAGTGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGTGGAACTCCAAGGCCTaGTTCATCAGGAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SVSLLPNTSATLERTVMVWNSKA*FIRRRS
Trigger: TGACCTTCTCCTGATGAAGCAGGCCTTGGAGTTCCA...CACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCCTCAGCCAGGTCTTCTaGCTGACCTGTAGCATTCTG +
Preference number: 4 (lower is better)
Translates to: KSSITRASSATRPLKHSALSQVF*LTCSIL
Trigger: CAGAATGCTACAGGTCAGGCAGAAGACCTGGCTGAG...GGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGTTCTTCTGCCGCTGCTaGCACATCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SNPLGFTAWPVQAFFAFKFFCRC*HISSSS
Trigger: GGAGGAGGAGGAGATGTGGCAGCAGCGGCAGAAGAA...CTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGACCCATCTCCGCTGTTaGTCCCTGGCCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SFVGSWHSFLWFAEALTGTHLRC*SLARSS
Trigger: GGAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGT...CCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp CCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTGCAAGTGTGGCCTCCTaGTTTGGTGAGCAGATTGGG +
Preference number: 4 (lower is better)
Translates to: PGIPSFGSLRRLLGLQEVASVAS*FGEQIG
Trigger: CCCAATCTGCTCACCAAAGCAGGAGGCCACACTTGC...AACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp CTTCCCCCTAAGATCTCTACCTGCTTCAGCAGAGCATCCCTCCTGCTCTCAAGGGCAAGTGTGGCCTCCTaGTTTGGTGAGCAGATTGGG +
Preference number: 4 (lower is better)
Translates to: LPPKISTCFSRASLLLSRASVAS*FGEQIG
Trigger: CCCAATCTGCTCACCAAAGCAGGAGGCCACACTTGC...CCTTGAGAGCAGGAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGTTATGGCACAGGTACTaGAGCCTGAGCGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RIHIDHQPRTLLGLQEVQLWHRY*SLSAPS
Trigger: GCTGGGCGCGCTCAGGCTGCAGTACCTGTGCCATAA...CTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp CTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTTATGGCACAGGTACTaGAGCCTGAGCGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LGTCILTKFSVGFRPSEGLWHRY*SLSAPS
Trigger: GCTGGGCGCGCTCAGGCTGCAGTACCTGTGCCATAA...ACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp CCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGACTGCAGGGGCACACATaGCCGGTGCCTAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: PAGNLHFDQVLCGFPSLRLQGHT*PVPRQK
Trigger: TTTCTGTCTAGGCACCGGGCATGTGTGCCCCTGCAG...TCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp ATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTAAGAGCCGGGCCATCTaGAGGGGCACACATGCCCGG +
Preference number: 4 (lower is better)
Translates to: IYICLPTLLASQLGPCRLKSRAI*RGTHAR
Trigger: CCGGGCATGTGTGCCCCTGCAGATGGCCCGGCTCTT...AAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCAGCTGGCACCAGGGTGTCTCCTaGGTACCCTCTGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSRSTQQPPEGFFKSTSWHQGVS*VPSAQA
Trigger: TGCCTGGGCAGAGGGTACCCAGGAGACACCCTGGTG...CCAGCTGGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp CAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGAGCAGGTGCCTGTATTTaGTCTCCAGGCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QPRTLLGLQEVQAFVAGGAGACI*SPGSCS
Trigger: AGAACAGGAGCCTGGAGACCAAATACAGGCACCTGC...TCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGGCAGGTGCCTGTATTTaGTCTCCAGGCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ESGWCPAAIAPLSRIMAMAGACI*SPGSCS
Trigger: AGAACAGGAGCCTGGAGACCAAATACAGGCACCTGC...CATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AGGAGAAGGTCATGGTACCTTCCCCCTAAGATCTCTACCTGCTTCAGCAGAGCACCCGTATCATGGCCATaGGACTTGGGGGAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: RRRSWYLPPKISTCFSRAPVSWP*DLGEVA
Trigger: CGCCACTTCCCCCAAGTCCCATGGCCATGATACGGG...TGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAGGTACCATGACCTTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACACAGAGGTCACCTGCCTaGAGCTCTCTAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: GQSPPSPEQVQPPGPLSTQRSPA*SSLETA
Trigger: AGCTGTCTCTAGAGAGCTCCAGGCAGGTGACCTCTG...TGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGTGCTCCTTTTCTAGCTaGACCCATCTCCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRCSFSS*THLRCC
Trigger: GCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCA...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp ACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGCAGCCGGGGAATATCTaGGTGTCCCCTCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TLTISLAPYWAFRKFRLLQPGNI*VSPQLV
Trigger: GACCAGCTGAGGGGACACCCAGATATTCCCCGGCTG...CAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GTGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTCTTGGCTTCACAGCTTaGCCCGTGCAGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VQKVKVLHHQSKFSHQAPLGFTA*PVQAFF
Trigger: AAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAG...AGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp GGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTCTTCCAACCCTCTTaGCTTCACAGCTTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GQSPPSPEQVQPPGPLSTVFQPS*LHSLAR
Trigger: ACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGAC...TGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp TGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTGTCTTCCAACCCTCTTaGCTTCACAGCTTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: CRRSKSSITRASSATRPLVFQPS*LHSLAR
Trigger: ACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGAC...AAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp GGCCTCCAGAAAAGAAAGAGCCTGGGACCCGAGAGGCTGGAAACAGCCCAGGGCTTAAAATGTAGAGTTTaGGGACTGCAGGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GLQKRKSLGPERLETAQGLKCRV*GLQEGS
Trigger: GCTTCCCTCCTGCAGTCCCCAAACTCTACATTTTAA...GCCCTGGGCTGTTTCCAGCCTCTCGGGTCCCAGGCTCTTTCTTTTCTGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGCCTCAATCCTCAGGATaGTGGCTTTCACTGATGTGG +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRPQSSG*WLSLMW
Trigger: CCACATCAGTGAAAGCCATCATCCTGAGGATTGAGG...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp GGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACATGGAGCAAAGGGCAGTaGGTGACTCGATGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GQSPPSPEQVQPPGPLSTWSKGQ*VTRCLF
Trigger: AAAGAGGCATCGAGTCACTCACTGCCCTTTGCTCCA...TGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp AAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCTTGGAGCAAAGGGCAGTaGGTGACTCGATGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KQGWAPFLRKRTAGHGFSWSKGQ*VTRCLF
Trigger: AAAGAGGCATCGAGTCACTCACTGCCCTTTGCTCCA...AGAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp AAAGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCAGCAGCCTCTGGCTGCTaGGCTCTTTGGTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KAWREIYWGESTLTISLAAASGC*ALWSPA
Trigger: TGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGC...TGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp CAGCATGGACGTCACCTCCGAGGCCTTCGTGTTCATGGTATGCTGGTCCTGGAGGTTGGCTTTCCTCCATaGCTGTTTCTTTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: QHGRHLRGLRVHGMLVLEVGFPP*LFLSLG
Trigger: TCCCAAGGAAAGAAACAGTCATGGAGGAAAGCCAAC...CTCCAGGACCAGCATACCATGAACACGAAGGCCTCGGAGGTGACGTCCATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp ACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCCCATGGTGGTGGTGGTaGGCTCCAGTGCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TYIFVFQPSWLHSLARAGPWWWW*APVLCC
Trigger: GCAGCAAAGCACTGGAGCTCACCACCACCACCATGG...GCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp CATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTGAGAATCACTGCGGATGTGCCGGGGTaGGGCTGCAGGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: HFDQVLCGFPSLRRLRITADVPG*GCRQLA
Trigger: TGCAAGTTGCCTGCAGCCTCACCCCGGCACATCCGC...AGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp TTTGTCCTCAGAGACACGCTCACCTTTGCCTCCCACCTTATGACACCTGGCTCTTTGCCTCCCACCTTATaGCACCTGGCTCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FVLRDTLTFASHLMTPGSLPPTL*HLALVC
Trigger: ACAGACCAGAGCCAGGTGTCATAAGGTGGGAGGCAA...AGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGCTCCTGGGTACCCTCTaGCCAGGCACAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPLLGTL*PGTAPL
Trigger: CAGAGGAGCTGTGCCTGGGCAGAGGGTACCCAGGAG...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp CAGCTGTGCTGTGCATGTGTCCTGCATCATGATGCCAACTCCCCTTCCTCCCACCCATTCGTCCAGAGCTaGTGCTTCCTCTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: QLCCACVLHHDANSPSSHPFVQS*CFLFTL
Trigger: AAGAGTGAAGAGGAAGCAGCAGCTCTGGACGAATGG...GTGGGAGGAAGGGGAGTTGGCATCATGATGCAGGACACATGCACAGCACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp GTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGGGCCTTGTAGGAAGCCTCCGTCTTCCCTGCCAGCCCTaGCAGAAGGTGCGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: VNVFQEDVEVLGLVGSLRLPCQP*QKVRLD
Trigger: GTCCAAACGCACCTTCTGGCAGGGCTGGCAGGGAAG...ACGGAGGCTTCCTACAAGGCCCAGAACCTCTACATCTTCCTGGAAAACATTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGATGAACTGCTGGAAGTaGAGCCTCTGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RRSKSSITRASSATRPLKMNCWK*SLWLLS
Trigger: GCTCAGCAGCCAGAGGCTGCACTTCCAGCAGTTCAT...CTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp CCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGTGGAACTCCAAGGCCTaGTTCATCAGGAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PSASHLTGPSGSSGFCGRWNSKA*FIRRRS
Trigger: TGACCTTCTCCTGATGAAGCAGGCCTTGGAGTTCCA...CCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp ACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGAGTGGCGAGAACAACTaGTCCTCCTTCATCGGTTCC +
Preference number: 4 (lower is better)
Translates to: TISLAPYWAFRKFRLLWQSGENN*SSFIGS
Trigger: GGAACCGATGAAGGAGGAGCAGTTGTTCTCGCCACT...CTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GGAAGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCGTGGAAAGTGGCTGGTaGCCTGCAGCTATAGCACCA +
Preference number: 4 (lower is better)
Translates to: GSSPPGLCLCGLSFLPPVVESGW*PAAIAP
Trigger: TGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCAC...GACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp ATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTGGCTCTCAGTGTCCTTaGTGCCGAACACATCTGCGA +
Preference number: 4 (lower is better)
Translates to: IHIDHQPRTLLGLQEVQAGSQCP*CRTHLR
Trigger: TCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCC...AGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGTTCTTCTGCCGCTGCTaGCACATCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SFVGSWHSFLWFAEALTGFFCRC*HISSSS
Trigger: GGAGGAGGAGGAGATGTGGCAGCAGCGGCAGAAGAA...CCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp TCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGCACTTCTTCTGCCGCTaGTGCCACATCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SFVGSWHSFLWFAEALTGHFFCR*CHISSS
Trigger: GGAGGAGGAGATGTGGCAGCAGCGGCAGAAGAAGTG...CCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp AGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGCTCCGTGGGCTCTCCTaGTCCTTTTCTAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: RIHIDHQPRTLLGLQEVQLRGLS*SFSSWT
Trigger: GGTCCAGCTAGAAAAGGAGCAGGAGAGCCCACGGAG...CTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp CACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCATTTCCCAGGGCAGGCTaGTGGGTACTAGGAGACATG +
Preference number: 4 (lower is better)
Translates to: HQLGTCILTKFSVGFRPSFPRAG*WVLGDM
Trigger: CATGTCTCCTAGTACCCAGCAGCCTGCCCTGGGAAA...TGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp TCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTTTTCCCAGGGCAGGCTaGTGGGTACTAGGAGACATG +
Preference number: 4 (lower is better)
Translates to: SKSSITRASSATRPLKHSFPRAG*WVLGDM
Trigger: CATGTCTCCTAGTACCCAGCAGCCTGCCCTGGGAAA...ACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGGAACTCATAGGTCTCTaGTTTCCCAGGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTISLAPYWAFRKFRLLWELIGL*FPRAGC
Trigger: GCAGCCTGCCCTGGGAAAGCAGAGACCTATGAGTTC...CCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp CCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTTTTGCAGGGGATATCTaGAAAGAGGGCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PGIPSFGSLRRLLGLQEVFAGDI*KEGQVS
Trigger: GCTGACCTGGCCCTCTTTGCAGATATCCCCTGCAAA...AACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp TTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTGAGAATCACTGGCTTGTCCGTCCAGGCCTaGAGCCTGAGACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FDQVLCGFPSLRRLRITGLSVQA*SLRLCR
Trigger: CCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAA...GCCAGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp CCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAGGAACATGGTCACCATaGTGCTCAGGCACTCTCGGT +
Preference number: 4 (lower is better)
Translates to: PAGNLHFDQVLCGFPSLRGTWSP*CSGTLG
Trigger: ACCGAGAGTGCCTGAGCAGCATGGTGACCATGTTCC...TCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGAGGCTGCAGGCAACTTaGATTTCTTTGGCTTTGGCG +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRRLQAT*ISLALA
Trigger: CGCCAAAGCCAAAGAAATGCAAGTTGCCTGCAGCCT...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGAGGCTGCAGGCAACTTaGATTTCTTTGGCTTTGGCG +
Preference number: 4 (lower is better)
Translates to: FAEALTGPSGSSGFCGRRRLQAT*ISLALA
Trigger: CGCCAAAGCCAAAGAAATGCAAGTTGCCTGCAGCCT...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp ACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGCTGCAGGGGCACACATaGCCGGTGCCTAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: TLTISLAPYWAFRKFRLLLQGHT*PVPRQK
Trigger: TTTCTGTCTAGGCACCGGGCATGTGTGCCCCTGCAG...CAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp CTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTCACTGGCTGAGGGATaGAGTGGAGACTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGTCILTKFSVGFRPSEGSLAEG*SGDWGC
Trigger: ACAGCCCCAGTCTCCACTGCATCCCTCAGCCAGTGA...ACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS-3UTR CCA 90 bp AGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGTCTGGTCCACAGGCCTaGACACACAATGTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RRSKSSITRASSATRPLKSGPQA*THNVAC
Trigger: GCAGGCAACATTGTGTGTCCAGGCCTGTGGACCAGA...CTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GAAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCATGGTATGCTGGTCCTaGAGCATCTGTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: EARMGAIPEEENRWTWVLMVCWS*SICSGL
Trigger: AAGCCCAGAACAGATGCTCCAGGACCAGCATACCAT...GAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp AGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCGGGACTTGGGGGAAGTaGCGAGAACAACTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLERDLLGRIHIDHQPRTGTWGK*REQLLL
Trigger: GAGGAGCAGTTGTTCTCGCCACTTCCCCCAAGTCCC...GGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCATGGCCATGGGACTTaGGGGAAGTGGCGAGAACAA +
Preference number: 4 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRHGHGT*GKWREQ
Trigger: TTGTTCTCGCCACTTCCCCCAAGTCCCATGGCCATG...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp ATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTCACTGTCCCGTATCATaGCCATGGGACTTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: IHIDHQPRTLLGLQEVQAHCPVS*PWDLGE
Trigger: TTCCCCCAAGTCCCATGGCCATGATACGGGACAGTG...AGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGTCGAGCGCACAGTCATaGTGGAAAGTGGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RIHIDHQPRTLLGLQEVQSSAQS*WKVAGA
Trigger: GGCACCAGCCACTTTCCACCATGACTGTGCGCTCGA...CTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp ATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTCAGAGGTCACCTGCCTaGAGCTCTCTAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: IHIDHQPRTLLGLQEVQAQRSPA*SSLETA
Trigger: AGCTGTCTCTAGAGAGCTCCAGGCAGGTGACCTCTG...AGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGAGACATGGGCAAGTGTaGCCTCCTGCTTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRRHGQV*PPALVS
Trigger: GCTCACCAAAGCAGGAGGCCACACTTGCCCATGTCT...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGCCCAGGGCAGGCTGCTaGGTACTAGGAGACATGGGC +
Preference number: 4 (lower is better)
Translates to: ERDLLGRIHIDHQPRTLLPRAGC*VLGDMG
Trigger: GCCCATGTCTCCTAGTACCCAGCAGCCTGCCCTGGG...CAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGATTTCTTGGGCTTTGTaGGAACTCGGCGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRISWAL*ELGGSV
Trigger: CACGGACCCGCCGAGTTCCCACAAAGCCCAAGAAAT...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTGGAGCTTGGGGAACATaGTCACCATGCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ADSFVGSWHSFLWFAEALGAWGT*SPCCSG
Trigger: GCCTGAGCAGCATGGTGACCATGTTCCCCAAGCTCC...AAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp GTGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTAAGTTCAGGCTTTTGTaGCAGGAGGACTACACGTCC +
Preference number: 4 (lower is better)
Translates to: VQKVKVLHHQSKFSHQAPKFRLL*QEDYTS
Trigger: GGACGTGTAGTCCTCCTGCCACAAAAGCCTGAACTT...AGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548841.5
3UTR CAA 72 bp GTGGAGCAAAGGGCAGTGAGTGACTCGATGCCTCTTTaGGTGGCAATGAGGGACAGCGGTAACACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VEQRAVSDSMPL*VAMRDSGNTFS
Trigger: GGAGAAAGTGTTACCGCTGTCCCTCATTGCCACCAAAAGAGGCATCGAGTCACTCACTGCCCTTTGCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 72 bp AGCTCTTTGGTCGCCTGCATTTGCAGGTGCCTGTATTaGGTCTCCAGGCTCCTGTTCTCCTTGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSLVACICRCLY*VSRLLFSLCWR
Trigger: CCTCCAACACAAGGAGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 72 bp CCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTaGCCAGAGAGCTCGCTAGAGGACGTGCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PKQEKNVRHSAC*PESSLEDVQKV
Trigger: GACCTTCTGCACGTCCTCTAGCGAGCTCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR TCA 90 bp GACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGTAGAAATATCCTCTTaGGCCCGAGTTAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DHQPRTLLGLQEVQAFVAVEISS*ARVSWA
Trigger: TGCCCAGCTAACTCGGGCTCAAGAGGATATTTCTAC...TGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp AGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGGCAAAGGGCAGTGAGTaGCTCGATGCCTCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: RRSKSSITRASSATRPLKAKGSE*LDASFG
Trigger: ACCAAAAGAGGCATCGAGTCACTCACTGCCCTTTGC...CTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGTCTTTTGTCCTTCAATaGGAGTGGAGCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRSFVLQ*EWSKGQ
Trigger: CTGCCCTTTGCTCCACTCTCATTGAAGGACAAAAGA...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp AGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCATCTTTTGTCCTTCAATaGGAGTGGAGCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPPSPEQVQPPGPLSTVPSFVLQ*EWSKGQ
Trigger: CTGCCCTTTGCTCCACTCTCATTGAAGGACAAAAGA...TGGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp CAGCTGTGCTGTGCATGTGTCCTGCATCATGATGCCAACTCCCCTTCCTCCCACTCTTTTGTCCTTCAATaGGAGTGGAGCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QLCCACVLHHDANSPSSHSFVLQ*EWSKGQ
Trigger: CTGCCCTTTGCTCCACTCTCATTGAAGGACAAAAGA...GTGGGAGGAAGGGGAGTTGGCATCATGATGCAGGACACATGCACAGCACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp TCAGTGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGGCGTTTGGACACTTGTaGCCTTTTCTTTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SVSLLPNTSATLERTVMVAFGHL*PFLLSF
Trigger: GAAGGACAAAAGAAAAGGTCACAAGTGTCCAAACGC...CACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp AGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCGGATCAAGGCCTTGTTaGGGTTCTCCACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SLERDLLGRIHIDHQPRTGSRPC*GSPPQW
Trigger: CCACTGTGGTGGAGAACCTCAACAAGGCCTTGATCC...GGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp TCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTGGATGGATGTCCCAGTaGCAGGAAAGGAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: STLTISLAPYWAFRKFRLGWMSQ*QERRQI
Trigger: AATCTGCCTCCTTTCCTGTCACTGGGACATCCATCC...AAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp GGAAGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCGGATGGATGTCCCAGTaGCAGGAAAGGAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: GSSPPGLCLCGLSFLPPVGWMSQ*QERRQI
Trigger: AATCTGCCTCCTTTCCTGTCACTGGGACATCCATCC...GACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp CTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTTCCCTGCCAGCCCTaGCAGAAGGTGCGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: LERDLLGRIHIDHQPRTLLPCQP*QKVRLD
Trigger: GTCCAAACGCACCTTCTGGCAGGGCTGGCAGGGAAG...TAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp ATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGTTGGTCGCCTGCATTTaGAGGTGCCTGTATTTGGTC +
Preference number: 4 (lower is better)
Translates to: ISLAPYWAFRKFRLLWQELVACI*RCLYLV
Trigger: GACCAAATACAGGCACCTGCAAATGCAGGCGACCAA...CTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTTTGGTCGCCTGCATTTaGAGGTGCCTGTATTTGGTC +
Preference number: 4 (lower is better)
Translates to: CRRSKSSITRASSATRPLLVACI*RCLYLV
Trigger: GACCAAATACAGGCACCTGCAAATGCAGGCGACCAA...AAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTATGAACTGCTGGAAGTaGAGCCTCTGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AWREIYWGESTLTISLAPMNCWK*SLWLLS
Trigger: GCTCAGCAGCCAGAGGCTGCACTTCCAGCAGTTCAT...AGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTAGGACCTCCATGAACTaGTGGAAGTGCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AWREIYWGESTLTISLAPRTSMN*WKCSLW
Trigger: CCAGAGGCTGCACTTCCAGCAGTTCATGGAGGTCCT...AGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTCAGCCAGGTCTTCTaGCTGACCTGTAGCATTCTG +
Preference number: 4 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRLSQVF*LTCSIL
Trigger: CAGAATGCTACAGGTCAGGCAGAAGACCTGGCTGAG...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTAAGTGGCTGGTGCCCTaGAGCTATAGCACCACTGTC +
Preference number: 4 (lower is better)
Translates to: AWREIYWGESTLTISLAPKWLVP*SYSTTV
Trigger: GACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTT...AGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp CAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGAAGTGGCTGGTGCCCTaGAGCTATAGCACCACTGTC +
Preference number: 4 (lower is better)
Translates to: QPETLQAVNVFQEDVEVLKWLVP*SYSTTV
Trigger: GACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTT...CAGAACCTCTACATCTTCCTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp CTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTGGCTCTCAGTGTCCTTaGTGCCGAACACATCTGCGA +
Preference number: 4 (lower is better)
Translates to: LGTCILTKFSVGFRPSEGGSQCP*CRTHLR
Trigger: TCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCC...ACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp ATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTCACTTCTTCTGCCGCTaGTGCCACATCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IFVFQPSWLHSLARAGFLHFFCR*CHISSS
Trigger: GGAGGAGGAGATGTGGCAGCAGCGGCAGAAGAAGTG...AAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCAGCTGGCTCCGTGGGCTCTCCTaGTCCTTTTCTAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: SSRSTQQPPEGFFKSTSWLRGLS*SFSSWT
Trigger: GGTCCAGCTAGAAAAGGAGCAGGAGAGCCCACGGAG...CCAGCTGGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp CTTTGGTCGCCTGCATTTGCAGGTGCCTGTATTTGGTCTCCAGGCTCCTGTTCTTTTGCAGGGGATATCTaGAAAGAGGGCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LWSPAFAGACIWSPGSCSFAGDI*KEGQVS
Trigger: GCTGACCTGGCCCTCTTTGCAGATATCCCCTGCAAA...AGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AGGCAACTTGCATTTCTTTGGCTTTGGCGAGGTGACCTCAGGGATGTTCAGGTGACATGGTCACCATGCTaGTCAGGCACTCTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RQLAFLWLWRGDLRDVQVTWSPC*SGTLGA
Trigger: AGCACCGAGAGTGCCTGAGCAGCATGGTGACCATGT...CACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AAAGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCAGGCACACATGCCCGGTaGCTAGACAGAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KAWREIYWGESTLTISLAGTHAR*LDRKGC
Trigger: GCAGCCCTTTCTGTCTAGGCACCGGGCATGTGTGCC...TGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGGGCACACATGCCCGGTaGCTAGACAGAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPGTHAR*LDRKGC
Trigger: GCAGCCCTTTCTGTCTAGGCACCGGGCATGTGTGCC...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp GTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGGGCCTTGTAGGAAGCCTCCGTCTGCAGGGGCACACATaGCCGGTGCCTAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: VNVFQEDVEVLGLVGSLRLQGHT*PVPRQK
Trigger: TTTCTGTCTAGGCACCGGGCATGTGTGCCCCTGCAG...ACGGAGGCTTCCTACAAGGCCCAGAACCTCTACATCTTCCTGGAAAACATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp CTTCCCCCTAAGATCTCTACCTGCTTCAGCAGAGCATCCCTCCTGCTCTCAAGGTCACAGCTTGGCCCGTaGAGGCTTTCTTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LPPKISTCFSRASLLLSRSQLGP*RLSLPL
Trigger: TAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGA...CCTTGAGAGCAGGAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GGATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCTGAGGATCACCAGCTGGGAACCTaGATTTTGACCAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GWAPFLRKRTAGHGFSEDHQLGT*ILTKFS
Trigger: AGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTG...ATCCTCAGAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp ATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGTCTGGTCCACAGGCCTaGACACACAATGTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: IDHQPRTLLGLQEVQAFVSGPQA*THNVAC
Trigger: GCAGGCAACATTGTGTGTCCAGGCCTGTGGACCAGA...CACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGGCCAGAAGGTGCGTTTaGACACTTGTGACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRARRCV*TLVTFS
Trigger: AGAAAAGGTCACAAGTGTCCAAACGCACCTTCTGGC...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAAGGCCTTCGTGTTCATaGTATGCTGGTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: HQLGTCILTKFSVGFRPSRPSCS*YAGPGA
Trigger: TGCTCCAGGACCAGCATACCATGAACACGAAGGCCT...TGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp AGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCAATCAGGAGAAGGTCATaGTACCTTCCCCCTAAGATC +
Preference number: 4 (lower is better)
Translates to: SPPSPEQVQPPGPLSTVPIRRRS*YLPPKI
Trigger: GATCTTAGGGGGAAGGTACCATGACCTTCTCCTGAT...TGGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp TCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTCTCTCAGAGGGACCTaGGGAGTCAACAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: STLTISLAPYWAFRKFRLSLRGT*GVNRNL
Trigger: GAGGTTTCTGTTGACTCCCCAGGTCCCTCTGAGAGA...AAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGCCCGTATCATGGCCATaGGACTTGGGGGAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: ERDLLGRIHIDHQPRTLLPVSWP*DLGEVA
Trigger: CGCCACTTCCCCCAAGTCCCATGGCCATGATACGGG...CAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCAGCTGGTCGAGCGCACAGTCATaGTGGAAAGTGGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SSRSTQQPPEGFFKSTSWSSAQS*WKVAGA
Trigger: GGCACCAGCCACTTTCCACCATGACTGTGCGCTCGA...CCAGCTGGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp ACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTCGAGCGCACAGTCATaGTGGAAAGTGGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TYIFVFQPSWLHSLARAGSSAQS*WKVAGA
Trigger: GGCACCAGCCACTTTCCACCATGACTGTGCGCTCGA...GCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp CCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGTGGTCTTTGTCTTTGTaGCCTAAGCTTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PSASHLTGPSGSSGFCGRWSLSL*PKLSAT
Trigger: GGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCA...CCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGAACTCGGCGGGTCCGTaGTCTGTAGGTAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: RIHIDHQPRTLLGLQEVQNSAGP*SVGKLH
Trigger: GTGGAGTTTACCTACAGACCACGGACCCGCCGAGTT...CTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGATTTCTTGGGCTTTGTaGGAACTCGGCGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: QPETLQAVNVFQEDVEVLISWAL*ELGGSV
Trigger: CACGGACCCGCCGAGTTCCCACAAAGCCCAAGAAAT...CAGAACCTCTACATCTTCCTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp TCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGACTCCAGCTGGAGCTTaGGGAACATGGTCACCATGC +
Preference number: 4 (lower is better)
Translates to: SFVGSWHSFLWFAEALTGTPAGA*GTWSPC
Trigger: GCATGGTGACCATGTTCCCCAAGCTCCAGCTGGAGT...CCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp GCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCTTTCTATTGCGTAACTaGAGGAGGCCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: APAGNLHFDQVLCGFPSLFLLRN*RRPPRS
Trigger: AGACCGAGGTGGCCTCCTCCAGTTACGCAATAGAAA...GAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp CACAGTGCCAAGAGCCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGTTTCTATTGCGTAACTaGAGGAGGCCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: HSAKSLTGPSGSSGFCGRFLLRN*RRPPRS
Trigger: AGACCGAGGTGGCCTCCTCCAGTTACGCAATAGAAA...CCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGCTCTTGGCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS-3UTR CCA 90 bp CATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAAAGTTCAGGCTTTTGTaGCAGGAGGACTACACGTCC +
Preference number: 4 (lower is better)
Translates to: HQPRTLLGLQEVQAFVAGKFRLL*QEDYTS
Trigger: GGACGTGTAGTCCTCCTGCCACAAAAGCCTGAACTT...TCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp ACATCCTCCTCAGCTTTCTGGAGTCTCAGCCTTAGGCTGGAAGCAAGGATGGGCTCCTTCTGGCTTATTTaGGTTCCAGGGAGTGACTCG +
Preference number: 4 (lower is better)
Translates to: TSSSAFWSLSLRLEARMGSFWLI*VPGSDS
Trigger: CGAGTCACTCCCTGGAACCCAAATAAGCCAGAAGGA...GCCCATCCTTGCTTCCAGCCTAAGGCTGAGACTCCAGAAAGCTGAGGAGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp TTTGTCCTCAGAGACACGCTCACCTTTGCCTCCCACCTTATGACACCTGGCTCTGGATGCAGTGGAGACTaGGGCTGTCTTGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: FVLRDTLTFASHLMTPGSGCSGD*GCLDPS
Trigger: AGAAGGATCAAGACAGCCCCAGTCTCCACTGCATCC...AGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CAA 72 bp CCTGTATTTGGTCTCCAGGCTCCTGTTCTCCTTGTGTaGGAGGATCAAGGCCTTGTTGAGGTTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: PVFGLQAPVLLV*EDQGLVEVLHH
Trigger: GTGGTGGAGAACCTCAACAAGGCCTTGATCCTCCAACACAAGGAGAACAGGAGCCTGGAGACCAAATACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 72 bp GAGGTCACCTGCCTGGAGCTCTCTAGAGACAGCTGCTaGCTACAGTGGAACTTAATTTGGAGTCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: EVTCLELSRDSC*LQWNLIWSPPF
Trigger: GAAGGGAGGACTCCAAATTAAGTTCCACTGTAGCAAGCAGCTGTCTCTAGAGAGCTCCAGGCAGGTGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 72 bp GCCAGAGACGGCCTCCTTAGCCCACACCGTCTATATTaGAACCTCATGTCTCCATGTCTTCCACCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ARDGLLSPHRLY*NLMSPCLPPLS
Trigger: GGACAAAGGTGGAAGACATGGAGACATGAGGTTCAAATATAGACGGTGTGGGCTAAGGAGGCCGTCTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp GCCAGGTGCCAATCACAGCTATCTCGGCATGTTTGCTCCCAAAGGACACAGACACTCTTTTGGTGGCAATaGGGGACAGCGGTAACACTT +
Preference number: 4 (lower is better)
Translates to: ARCQSQLSRHVCSQRTQTLFWWQ*GTAVTL
Trigger: AAGTGTTACCGCTGTCCCTCATTGCCACCAAAAGAG...TGTCTGTGTCCTTTGGGAGCAAACATGCCGAGATAGCTGTGATTGGCACCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp GCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAGGCCTCCTGCTTTGGTaGGCAGATTGGGTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: AVFLKVLGVLSNPQRVSLGLLLW*ADWVRL
Trigger: AAGCCGGACCCAATCTGCTCACCAAAGCAGGAGGCC...TAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp CCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGACTGGGGCTGTCTTaGTCCTTCTGGCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: PAGNLHFDQVLCGFPSLRRLGLS*SFWLIW
Trigger: CCAAATAAGCCAGAAGGATCAAGACAGCCCCAGTCT...TCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS-3UTR TCA 90 bp GCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCTGGACATGGGTTCTCTaGGGATGGGGTAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: APAGNLHFDQVLCGFPSLWTWVL*GWGNFL
Trigger: TAGGAAATTACCCCATCCTCAGAGAACCCATGTCCA...GAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp TCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCGATGGGCGCCATTCCTaGGGAAGAGAACCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SQSSRSTQQPPEGFFKSTDGRHS*GREPLD
Trigger: GTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATC...GGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGAGCTCCTCTGGTAACTaGCAAACACCAGGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRSSSGN*QTPGSN
Trigger: GTTGGAACCTGGTGTTTGGCAGTTACCAGAGGAGCT...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGTTCGTCCAGAGCTGCTaGTTCCTCTTCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRFVQSC*FLFTLP
Trigger: AGGAAGAGTGAAGAGGAAGCAGCAGCTCTGGACGAA...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTTTCGTCCAGAGCTGCTaGTTCCTCTTCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SKSSITRASSATRPLKHSFVQSC*FLFTLP
Trigger: AGGAAGAGTGAAGAGGAAGCAGCAGCTCTGGACGAA...ACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCAGCCCTGCCAGAAGGTaGGTTTGGACACTTGTGACC +
Preference number: 4 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFSPARR*VWTLVT
Trigger: GGTCACAAGTGTCCAAACGCACCTTCTGGCAGGGCT...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp GGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACATTCGTGTTCATGGTATaGTGGTCCTGGAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: GQSPPSPEQVQPPGPLSTFVFMV*WSWSIC
Trigger: ACAGATGCTCCAGGACCAGCATACCATGAACACGAA...TGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp CCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGACCTAAGATCTCTACCTaGTTCAGCAGAGCATCCCTC +
Preference number: 4 (lower is better)
Translates to: PTLLASQLGPCRLSLPLRPKIST*FSRASL
Trigger: GAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGG...TCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp CAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGAGTGGCGAGAACAACTaGTCCTCCTTCATCGGTTCC +
Preference number: 4 (lower is better)
Translates to: QPETLQAVNVFQEDVEVLSGENN*SSFIGS
Trigger: GGAACCGATGAAGGAGGAGCAGTTGTTCTCGCCACT...CAGAACCTCTACATCTTCCTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCGTGGAAAGTGGCTGGTaGCCTGCAGCTATAGCACCA +
Preference number: 4 (lower is better)
Translates to: RDLLGRIHIDHQPRTLLGVESGW*PAAIAP
Trigger: TGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCAC...GCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGCTCTCTAGAGACAGCTaGTTGCTACAGTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRLSRDS*LLQWNL
Trigger: TAAGTTCCACTGTAGCAAGCAGCTGTCTCTAGAGAG...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACCACTTCTTCTGCCGCTaGTGCCACATCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WREIYWGESTLTISLAPYHFFCR*CHISSS
Trigger: GGAGGAGGAGATGTGGCAGCAGCGGCAGAAGAAGTG...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCGAACTCATAGGTCTCTaGTTTCCCAGGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFELIGL*FPRAGC
Trigger: GCAGCCTGCCCTGGGAAAGCAGAGACCTATGAGTTC...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp ACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCGAACTCATAGGTCTCTaGTTTCCCAGGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TYIFVFQPSWLHSLARAGELIGL*FPRAGC
Trigger: GCAGCCTGCCCTGGGAAAGCAGAGACCTATGAGTTC...GCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTTGCAGGGGATATCTaGAAAGAGGGCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: EIYWGESTLTISLAPYWAFAGDI*KEGQVS
Trigger: GCTGACCTGGCCCTCTTTGCAGATATCCCCTGCAAA...GGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGGGTGGTGAGCTCCAGTaGTTTGCTGCGCAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPGGELQ*FAAQVV
Trigger: CACTACCTGCGCAGCAAAGCACTGGAGCTCACCACC...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp GAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTGCAGCCTGAGACTCTaGAGGCGGTCAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: EIYWGESTLTISLAPYWACSLRL*RRSMFS
Trigger: GGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCA...GGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp AGGAGGGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGTGCAGCCTGAGACTCTaGAGGCGGTCAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RREAVFLKVLGVLSNPQRCSLRL*RRSMFS
Trigger: GGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCA...CCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp AGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCGGAACATGGTCACCATaGTGCTCAGGCACTCTCGGT +
Preference number: 4 (lower is better)
Translates to: RDLLGRIHIDHQPRTLLGGTWSP*CSGTLG
Trigger: ACCGAGAGTGCCTGAGCAGCATGGTGACCATGTTCC...GCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCAGGCTGCAGGCAACTTaGATTTCTTTGGCTTTGGCG +
Preference number: 4 (lower is better)
Translates to: FVFQPSWLHSLARAGFLCRLQAT*ISLALA
Trigger: CGCCAAAGCCAAAGAAATGCAAGTTGCCTGCAGCCT...GCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR GCA 90 bp ATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTCTGCAGGGGCACACATaGCCGGTGCCTAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: IYICLPTLLASQLGPCRLLQGHT*PVPRQK
Trigger: TTTCTGTCTAGGCACCGGGCATGTGTGCCCCTGCAG...AAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp AATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGACACCAGGGTGTCTCCTaGGTACCCTCTGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: NCYQSRRRMSDTLHACQRHQGVS*VPSAQA
Trigger: TGCCTGGGCAGAGGGTACCCAGGAGACACCCTGGTG...TCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGAGACACGCTCACCTTTGTCTGGTCCACAGGCCTaGACACACAATGTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NLMSPCLPPLSSETRSPLSGPQA*THNVAC
Trigger: GCAGGCAACATTGTGTGTCCAGGCCTGTGGACCAGA...CAAAGGTGAGCGTGTCTCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp ATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGTGTTCATGGTATGCTaGTCCTGGAGCATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ISLAPYWAFRKFRLLWQEVFMVC*SWSICS
Trigger: AGAACAGATGCTCCAGGACCAGCATACCATGAACAC...CTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGTTCATGGTATGCTaGTCCTGGAGCATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GQSPPSPEQVQPPGPLSTVFMVC*SWSICS
Trigger: AGAACAGATGCTCCAGGACCAGCATACCATGAACAC...TGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCACCTCCATGAACTGCTaGAAGTGCAGCCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RDLLGRIHIDHQPRTLLGTSMNC*KCSLWL
Trigger: CAGCCAGAGGCTGCACTTCCAGCAGTTCATGGAGGT...GCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCATGGTGGAAAGTGGCTaGTGCCCTGCAGCTATAGCA +
Preference number: 4 (lower is better)
Translates to: SLERDLLGRIHIDHQPRTMVESG*CPAAIA
Trigger: TGCTATAGCTGCAGGGCACCAGCCACTTTCCACCAT...GGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCCAGAGGTCACCTGCCTaGAGCTCTCTAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFQRSPA*SSLETA
Trigger: AGCTGTCTCTAGAGAGCTCCAGGCAGGTGACCTCTG...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp TTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTGAGAATCACTGGCAGACATGGGCAAGTGTaGCCTCCTGCTTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: FDQVLCGFPSLRRLRITGRHGQV*PPALVS
Trigger: GCTCACCAAAGCAGGAGGCCACACTTGCCCATGTCT...GCCAGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCAACTCGGCGGGTCCGTaGTCTGTAGGTAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFNSAGP*SVGKLH
Trigger: GTGGAGTTTACCTACAGACCACGGACCCGCCGAGTT...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp ACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGAGGAGGCAGATTTCTTaGGCTTTGTGGGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: TLTISLAPYWAFRKFRLLRRQIS*ALWELG
Trigger: GCCGAGTTCCCACAAAGCCCAAGAAATCTGCCTCCT...CAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCACTCCAGCTGGAGCTTaGGGAACATGGTCACCATGC +
Preference number: 4 (lower is better)
Translates to: RDLLGRIHIDHQPRTLLGTPAGA*GTWSPC
Trigger: GCATGGTGACCATGTTCCCCAAGCTCCAGCTGGAGT...GCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCACGTTCCACTCCAGCTaGAGCTTGGGGAACATGGTC +
Preference number: 4 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFTFHSS*SLGNMV
Trigger: GACCATGTTCCCCAAGCTCCAGCTGGAGTGGAACGT...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp TATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTACGTTCCACTCCAGCTaGAGCTTGGGGAACATGGTC +
Preference number: 4 (lower is better)
Translates to: YLSSNPLGFTAWPVQAFFTFHSS*SLGNMV
Trigger: GACCATGTTCCCCAAGCTCCAGCTGGAGTGGAACGT...AAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp TTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCGCATTTCTTTGGCTTTaGCGAGGTGACCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: FVFQPSWLHSLARAGFLCAFLWL*RGDLRD
Trigger: ATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGC...GCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp TTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGTTTCTATTGCGTAACTaGAGGAGGCCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LTISLAPYWAFRKFRLLWFLLRN*RRPPRS
Trigger: AGACCGAGGTGGCCTCCTCCAGTTACGCAATAGAAA...CCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTGAGAATCACTCAGCCGGGGAATATCTaGGTGTCCCCTCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: HFDQVLCGFPSLRRLRITQPGNI*VSPQLV
Trigger: GACCAGCTGAGGGGACACCCAGATATTCCCCGGCTG...AGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp CACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCATGGCATTCCTTCCTTTaGTTCGCTGAGGCGCTTACT +
Preference number: 4 (lower is better)
Translates to: HQLGTCILTKFSVGFRPSWHSFL*FAEALT
Trigger: AGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCA...TGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp GCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCCCACCTTATGACACCTaGCTCTGGTCTGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: APAGNLHFDQVLCGFPSLPPYDT*LWSVFG
Trigger: ACCAAATACAGACCAGAGCCAGGTGTCATAAGGTGG...GAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp TTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCATGGGACCCGAGAGGCTaGAAACAGCCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FLKVLGVLSNPQRVSLKAWDPRG*KQPRAS
Trigger: GCTGGCCCTGGGCTGTTTCCAGCCTCTCGGGTCCCA...TGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp AACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGGATGATGGCTTTCACTaGTGTGGGAGTCACCAACTG +
Preference number: 4 (lower is better)
Translates to: NPLGFTAWPVQAFFAFKKDDGFH*CGSHQL
Trigger: CAGTTGGTGACTCCCACATCAGTGAAAGCCATCATC...CTTCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp AGGCAACTTGCATTTCTTTGGCTTTGGCGAGGTGACCTCAGGGATGTTCAGGTGCCTCAATCCTCAGGATaGTGGCTTTCACTGATGTGG +
Preference number: 4 (lower is better)
Translates to: RQLAFLWLWRGDLRDVQVPQSSG*WLSLMW
Trigger: CCACATCAGTGAAAGCCATCATCCTGAGGATTGAGG...CACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp CTTGTCCGTCCAGGCCTGCAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGATTGTCCAAAATGTCTaGGAGCTGGGTAGAAATATC +
Preference number: 4 (lower is better)
Translates to: LVRPGLQPETLQAVNVFQIVQNV*ELGRNI
Trigger: GATATTTCTACCCAGCTCTCAGACATTTTGGACAAT...CTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR TCA 90 bp ACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGCTCTTTTGGTGGCAATaGGGGACAGCGGTAACACTT +
Preference number: 4 (lower is better)
Translates to: TLTISLAPYWAFRKFRLLLFWWQ*GTAVTL
Trigger: AAGTGTTACCGCTGTCCCTCATTGCCACCAAAAGAG...CAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp TTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGAGCTTGGCTTTGGCGAGGTaGCCTCAGGGATGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLPKQEKNVRHSACLPESLALAR*PQGCSG
Trigger: ACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAA...GCTCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR TCA 90 bp AGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGGGGAGAATCCACATTaGCCATCAGCCTCGCACCTT +
Preference number: 4 (lower is better)
Translates to: REIYWGESTLTISLAPYWGENPH*PSASHL
Trigger: AAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCC...CCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp CCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGATGGGAACCTGCATTTTaGCCAAGTTCTCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: PAGNLHFDQVLCGFPSLRWEPAF*PSSLWV
Trigger: AACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCA...TCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS-3UTR TCA 90 bp CCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAGTTCTAAAACTGAGTTaGGGAGGTGTGGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PAGNLHFDQVLCGFPSLRVLKLS*GGVGFS
Trigger: GCTGAAACCCACACCTCCTCAACTCAGTTTTAGAAC...TCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp GGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCCTGGACACACAATGTTaGCTGCTTTGGAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: GESTLTISLAPYWAFRKFLDTQC*LLWRLR
Trigger: CCTTAACCTCCAAAGCAGGCAACATTGTGTGTCCAG...GAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp CACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTCCATTCGTCCAGAGCTaGTGCTTCCTCTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: HIDHQPRTLLGLQEVQAFPFVQS*CFLFTL
Trigger: AAGAGTGAAGAGGAAGCAGCAGCTCTGGACGAATGG...AAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACAGCCCTGCCAGAAGGTaGGTTTGGACACTTGTGACC +
Preference number: 4 (lower is better)
Translates to: WREIYWGESTLTISLAPYSPARR*VWTLVT
Trigger: GGTCACAAGTGTCCAAACGCACCTTCTGGCAGGGCT...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp AATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGAGAGTCCAGGAGCTCCTaGAGCATGGACGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: NCYQSRRRMSDTLHACQRESRSS*SMDVTS
Trigger: GGAGGTGACGTCCATGCTGCAGGAGCTCCTGGACTC...TCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTGCATTTGCAGGTaGCTGTATTTGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YLSSNPLGFTAWPVQAFFACICR*LYLVSR
Trigger: CCTGGAGACCAAATACAGGCACCTGCAAATGCAGGC...AAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTAGCTCTTTGGTCGCCTaGATTTGCAGGTGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: AWREIYWGESTLTISLAPSSLVA*ICRCLY
Trigger: ATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCT...AGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp AGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCCCTAAGATCTCTACCTaGTTCAGCAGAGCATCCCTC +
Preference number: 4 (lower is better)
Translates to: SLERDLLGRIHIDHQPRTPKIST*FSRASL
Trigger: GAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGG...GGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCTCAGTGTCCTTGCTaGCGAACACATCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPSQCPC*RTHLRP
Trigger: GGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGA...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp CTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTCTCAGAGGTCACCTaGCTGGAGCTCTCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: LERDLLGRIHIDHQPRTLLSEVT*LELSRD
Trigger: GTCTCTAGAGAGCTCCAGGCAGGTGACCTCTGAGAG...TAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp AATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGAACCCATCTCCGCTGTTaGTCCCTGGCCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NCYQSRRRMSDTLHACQRTHLRC*SLARSS
Trigger: GGAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGT...TCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACGCAAGTGTGGCCTCCTaGTTTGGTGAGCAGATTGGG +
Preference number: 4 (lower is better)
Translates to: WREIYWGESTLTISLAPYASVAS*FGEQIG
Trigger: CCCAATCTGCTCACCAAAGCAGGAGGCCACACTTGC...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp AGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGTTTCCCAGGGCAGGCTaGTGGGTACTAGGAGACATG +
Preference number: 4 (lower is better)
Translates to: REIYWGESTLTISLAPYWFPRAG*WVLGDM
Trigger: CATGTCTCCTAGTACCCAGCAGCCTGCCCTGGGAAA...CCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp CATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTGGTGCCCTGCAGCTTCTTCTTAATATTTaGAGGGGATATCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: HLRPSSAQSWWKVAGALQLLLNI*RGYLQR
Trigger: TCTTTGCAGATATCCCCTGCAAATATTAAGAAGAAG...CTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGACATGGTCACCATGCTaGTCAGGCACTCTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: REIYWGESTLTISLAPYWTWSPC*SGTLGA
Trigger: AGCACCGAGAGTGCCTGAGCAGCATGGTGACCATGT...CCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGACATGGTCACCATGCTaGTCAGGCACTCTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPTWSPC*SGTLGA
Trigger: AGCACCGAGAGTGCCTGAGCAGCATGGTGACCATGT...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp AGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAACAGACAGCCTCCATCTaGTTCCCCTGTTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SVSQSSRSTQQPPEGFFKQTASI*FPCWRA
Trigger: GGCCCGCCAACAGGGGAAGCAGATGGAGGCTGTCTG...TTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp ACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGATCACAGCTTGGCCCGTaGAGGCTTTCTTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: TLLASQLGPCRLSLPLRRSQLGP*RLSLPL
Trigger: TAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGA...TCTTCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACGGGAGTCACCAACTGTaGGGGGTCATCCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: WREIYWGESTLTISLAPYGSHQL*GVILLH
Trigger: ATGGAGAAGGATGACCCCCCACAGTTGGTGACTCCC...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTGGCTTTCACTGATGTaGGAGTCACCAACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFWLSLM*ESPTVG
Trigger: CCCCACAGTTGGTGACTCCCACATCAGTGAAAGCCA...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp AGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCCCTCTTCACTCTTCCTaGGCCCAATCTCATAGGTCA +
Preference number: 4 (lower is better)
Translates to: SLERDLLGRIHIDHQPRTPLHSS*AQSHRS
Trigger: TGACCTATGAGATTGGGCCCAGGAAGAGTGAAGAGG...GGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCTTTTGGCTGAGGATGGGATaGAGATGTCTGTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSPPGLCLCGLSFLPPVFWLRMG*RCLWAS
Trigger: AGAAGCCCACAGACATCTCCATCCCATCCTCAGCCA...AAAGACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTGGCTGAGGATGGGATaGAGATGTCTGTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFWLRMG*RCLWAS
Trigger: AGAAGCCCACAGACATCTCCATCCCATCCTCAGCCA...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp ACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGATGGTATGCTGGTCCTaGAGCATCTGTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TLTISLAPYWAFRKFRLLMVCWS*SICSGL
Trigger: AAGCCCAGAACAGATGCTCCAGGACCAGCATACCAT...CAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp TTTGTCCTCAGAGACACGCTCACCTTTGCCTCCCACCTTATGACACCTGGCTCTGTGTTCATGGTATGCTaGTCCTGGAGCATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FVLRDTLTFASHLMTPGSVFMVC*SWSICS
Trigger: AGAACAGATGCTCCAGGACCAGCATACCATGAACAC...AGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp AGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCTTTAGGCCTTCGTGTTCATaGTATGCTGGTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSPPGLCLCGLSFLPPVFRPSCS*YAGPGA
Trigger: TGCTCCAGGACCAGCATACCATGAACACGAAGGCCT...AAAGACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGGGCCTTGTAGGAAGCCTCCGTTCTCTCAGAGGGACCTaGGGAGTCAACAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: VNVFQEDVEVLGLVGSLRSLRGT*GVNRNL
Trigger: GAGGTTTCTGTTGACTCCCCAGGTCCCTCTGAGAGA...ACGGAGGCTTCCTACAAGGCCCAGAACCTCTACATCTTCCTGGAAAACATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp TTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGAGCCATGGCCATGGGACTTaGGGGAAGTGGCGAGAACAA +
Preference number: 4 (lower is better)
Translates to: LLPKQEKNVRHSACLPESHGHGT*GKWREQ
Trigger: TTGTTCTCGCCACTTCCCCCAAGTCCCATGGCCATG...GCTCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp TTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGAGCTGCTTGCTACAGTaGAACTTAATTTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FAEALTGPSGSSGFCGRRSCLLQ*NLIWSP
Trigger: AGGACTCCAAATTAAGTTCCACTGTAGCAAGCAGCT...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp GTGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTAGCTGCTTGCTACAGTaGAACTTAATTTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VQKVKVLHHQSKFSHQAPSCLLQ*NLIWSP
Trigger: AGGACTCCAAATTAAGTTCCACTGTAGCAAGCAGCT...AGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCTTTTGCTCCTTTTCTAGCTaGACCCATCTCCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SSPPGLCLCGLSFLPPVFCSFSS*THLRCC
Trigger: GCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCA...AAAGACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCAGGAGGCAGATTTCTTaGGCTTTGTGGGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFRRQIS*ALWELG
Trigger: GCCGAGTTCCCACAAAGCCCAAGAAATCTGCCTCCT...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp ACGTGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCGCCTCCATGTCCATGTaGTACACCTTCTTCTTAATA +
Preference number: 4 (lower is better)
Translates to: TCRRSKSSITRASSATRPASMSM*YTFFLI
Trigger: TATTAAGAAGAAGGTGTACCACATGGACATGGAGGC...GGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGACGTTCCACTCCAGCTaGAGCTTGGGGAACATGGTC +
Preference number: 4 (lower is better)
Translates to: ERDLLGRIHIDHQPRTLLTFHSS*SLGNMV
Trigger: GACCATGTTCCCCAAGCTCCAGCTGGAGTGGAACGT...CAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp ACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGGCATTTCTTTGGCTTTaGCGAGGTGACCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TLTISLAPYWAFRKFRLLAFLWL*RGDLRD
Trigger: ATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGC...CAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGGAGGGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGCATTTCTTTGGCTTTaGCGAGGTGACCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RREAVFLKVLGVLSNPQRAFLWL*RGDLRD
Trigger: ATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGC...CCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp TCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGCAACTTGCATTTCTTTaGCTTTGGCGAGGTGACCTC +
Preference number: 4 (lower is better)
Translates to: SNPLGFTAWPVQAFFAFKQLAFL*LWRGDL
Trigger: GAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTG...CTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp TTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCAATCTGCTTCCCCTGTTaGCGGGCCATCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FLKVLGVLSNPQRVSLKAICFPC*RAICRG
Trigger: GCCCCTGCAGATGGCCCGCCAACAGGGGAAGCAGAT...TGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp TATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTCTGAGGACCCAGAGCTaGAATCTCACTCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: YLSSNPLGFTAWPVQAFFLRTQS*NLTQTW
Trigger: CCAGGTTTGAGTGAGATTCCAGCTCTGGGTCCTCAG...AAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp TCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGTCCTTCTGGCTTATTTaGGTTCCAGGGAGTGACTCG +
Preference number: 4 (lower is better)
Translates to: SFVGSWHSFLWFAEALTGSFWLI*VPGSDS
Trigger: CGAGTCACTCCCTGGAACCCAAATAAGCCAGAAGGA...CCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCGGATGCAGTGGAGACTaGGGCTGTCTTGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFGCSGD*GCLDPS
Trigger: AGAAGGATCAAGACAGCCCCAGTCTCCACTGCATCC...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS-3UTR CCA 90 bp GGTATCTCCTTTTGTTCTCACCTTCTGAGCTTTCATGCAGATCACTGGCATGTCGTCTCAGCCTTAGGCTaGAAGCAAGGATGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: GISFCSHLLSFHADHWHVVSALG*KQGWAP
Trigger: TGGCGCCCATCCTTGCTTCCAGCCTAAGGCTGAGAC...GACATGCCAGTGATCTGCATGAAAGCTCAGAAGGTGAGAACAAAAGGAGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp CAGCTTTCTGGAGTCTCAGCCTTAGGCTGGAAGCAAGGATGGGCGCCATTCCTGGATGTTAAGTATCATTaGGGTGAGGCCTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: QLSGVSALGWKQGWAPFLDVKYH*GEASRK
Trigger: TTTTCTGGAGGCCTCACCCCAATGATACTTAACATC...CAGGAATGGCGCCCATCCTTGCTTCCAGCCTAAGGCTGAGACTCCAGAAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CAA 72 bp AAAGCCTGGAGAGAGATTTATTGGGGAGAATCCACATaGACCATCAGCCTCGCACCTTACTGGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KAWREIYWGEST*TISLAPYWAFR
Trigger: CCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
3UTR CAA 72 bp TGGCGAGAACAACTGCTCCTCCTTCATCGGTTCCTGTaGGCTTTCCTCCATGACTGTTTCTTTCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: WREQLLLLHRFL*AFLHDCFFPWE
Trigger: CTCCCAAGGAAAGAAACAGTCATGGAGGAAAGCCAACAGGAACCGATGAAGGAGGAGCAGTTGTTCTCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
3UTR CAA 72 bp AAGTGCCAGGTGCCAATCACAGCTATCTCGGCATGTTaGCTCCCAAAGGACACAGACAACACTCAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: KCQVPITAISAC*LPKDTDNTQRV
Trigger: AACCCTCTGAGTGTTGTCTGTGTCCTTTGGGAGCAAACATGCCGAGATAGCTGTGATTGGCACCTGGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp AGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCAAAGGGCAGTGAGTaGCTCGATGCCTCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: REIYWGESTLTISLAPYWAKGSE*LDASFG
Trigger: ACCAAAAGAGGCATCGAGTCACTCACTGCCCTTTGC...CCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp AGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGTGGAGCAAAGGGCAGTaGGTGACTCGATGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: REIYWGESTLTISLAPYWWSKGQ*VTRCLF
Trigger: AAAGAGGCATCGAGTCACTCACTGCCCTTTGCTCCA...CCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp GCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTGTTGGCTTTCCTCCATaGCTGTTTCTTTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: AWREIYWGESTLTISLAPVGFPP*LFLSLG
Trigger: TCCCAAGGAAAGAAACAGTCATGGAGGAAAGCCAAC...AGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp AACAAGCTAAGCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTTGGCTTTGGCGAGGTaGCCTCAGGGATGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: NKLSGFICRFLAFLPLVRLALAR*PQGCSG
Trigger: ACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAA...GCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGCTTAGCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp TCTTTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCTTCCTTTGGTTCGCTaGGGCGCTTACTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SLKAPAGNLHFDQVLCGFLPLVR*GAYWAF
Trigger: GAAGGCCCAGTAAGCGCCTCAGCGAACCAAAGGAAG...AAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTTGAGAATCACTGGCTaGGGGATGCAGTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPLRITG*GMQWRL
Trigger: CAGTCTCCACTGCATCCCTCAGCCAGTGATTCTCAA...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS-3UTR TCA 90 bp AACAAGCTAAGCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCCGTCCCTCAGAAGGTTaGGAATCACTGGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: NKLSGFICRFLAFLPLVRRPSEG*ESLAEG
Trigger: TCCCTCAGCCAGTGATTCTCAACCTTCTGAGGGACG...GCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGCTTAGCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp TTTGTCCTCAGAGACACGCTCACCTTTGCCTCCCACCTTATGACACCTGGCTCTCACACCGTCTATATTTaGACCTCATGTCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: FVLRDTLTFASHLMTPGSHTVYI*TSCLHV
Trigger: GACATGGAGACATGAGGTTCAAATATAGACGGTGTG...AGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp GAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCGTGTTCATGGTATaGTGGTCCTGGAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: EIYWGESTLTISLAPYWAFVFMV*WSWSIC
Trigger: ACAGATGCTCCAGGACCAGCATACCATGAACACGAA...GGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACGCCTGCATTTGCAGGTaGCTGTATTTGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WREIYWGESTLTISLAPYACICR*LYLVSR
Trigger: CCTGGAGACCAAATACAGGCACCTGCAAATGCAGGC...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR GCA 90 bp TTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCAGCTGCCGAACACATCTaGGACCCTCGAGCGCACAGT +
Preference number: 4 (lower is better)
Translates to: FLKVLGVLSNPQRVSLKAAAEHI*DPRAHS
Trigger: ACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGC...TGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp ACACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGGCTCTCAGTGTCCTTaGTGCCGAACACATCTGCGA +
Preference number: 4 (lower is better)
Translates to: THTYIFVFQPSWLHSLARGSQCP*CRTHLR
Trigger: TCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCC...ACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp AACAAGCTAAGCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCCTCTCAGAGGTCACCTaGCTGGAGCTCTCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: NKLSGFICRFLAFLPLVRLSEVT*LELSRD
Trigger: GTCTCTAGAGAGCTCCAGGCAGGTGACCTCTGAGAG...GCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGCTTAGCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp TTGAACAAGCTAAGCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTACATCCTCCCCTAGCTaGTCTGGCTCTCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LNKLSGFICRFLAFLPLVTSSPS*SGSLRG
Trigger: CCCACGGAGAGAGCCAGAGCAGCTAGGGGAGGATGT...AACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGCTTAGCTTGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp ATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTGAATGTCAGACACTCTaGATGCTTGCCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: IFVFQPSWLHSLARAGFLECQTL*MLAREL
Trigger: GAGCTCTCTGGCAAGCATGCAGAGTGTCTGACATTC...AAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR GCA 90 bp AGGAGGGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGCACCAGCTGGGAACCTaGATTTTGACCAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RREAVFLKVLGVLSNPQRHQLGT*ILTKFS
Trigger: AGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTG...CCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS-3UTR GCA 90 bp TCTTTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTGGGCCAGCACAGCTGTaGTGTGCATGTGTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLKAPAGNLHFDQVLCGFGPAQL*CACVLH
Trigger: ATGCAGGACACATGCACAGCACAGCTGTGCTGGCCC...AAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp AGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGCAATGTTGCCTGCTTTaGAGGTTAAGGGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: REIYWGESTLTISLAPYWQCCLL*RLRAPG
Trigger: CCCTGGTGCCCTTAACCTCCAAAGCAGGCAACATTG...CCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAATGTTGCCTGCTTTaGAGGTTAAGGGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: HTHIYLSSNPLGFTAWPVQCCLL*RLRAPG
Trigger: CCCTGGTGCCCTTAACCTCCAAAGCAGGCAACATTG...CACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GCCTCCATGTCCATGTGGTACACCTTCTTCTTAATATTTGCAGGGGATATCTGCGGGAGTCACCAACTGTaGGGGGTCATCCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: ASMSMWYTFFLIFAGDICGSHQL*GVILLH
Trigger: ATGGAGAAGGATGACCCCCCACAGTTGGTGACTCCC...GCAGATATCCCCTGCAAATATTAAGAAGAAGGTGTACCACATGGACATGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AAAGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCATGGCTTTCACTGATGTaGGAGTCACCAACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: KAWREIYWGESTLTISLAWLSLM*ESPTVG
Trigger: CCCCACAGTTGGTGACTCCCACATCAGTGAAAGCCA...TGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CAGCTGTGCTGTGCATGTGTCCTGCATCATGATGCCAACTCCCCTTCCTCCCACTATCCTAATTCTTCCTaGAAGCGGTTGATGACACAA +
Preference number: 4 (lower is better)
Translates to: QLCCACVLHHDANSPSSHYPNSS*KRLMTQ
Trigger: TTGTGTCATCAACCGCTTCCAGGAAGAATTAGGATA...GTGGGAGGAAGGGGAGTTGGCATCATGATGCAGGACACATGCACAGCACAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp AGGAGGGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGCCAGAAGGTGCGTTTaGACACTTGTGACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RREAVFLKVLGVLSNPQRARRCV*TLVTFS
Trigger: AGAAAAGGTCACAAGTGTCCAAACGCACCTTCTGGC...CCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGCTGAGGATGGGATaGAGATGTCTGTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WREIYWGESTLTISLAPYWLRMG*RCLWAS
Trigger: AGAAGCCCACAGACATCTCCATCCCATCCTCAGCCA...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AAAGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCAAGGCCTTCGTGTTCATaGTATGCTGGTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KAWREIYWGESTLTISLARPSCS*YAGPGA
Trigger: TGCTCCAGGACCAGCATACCATGAACACGAAGGCCT...TGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGATGGTGGAAAGTGGCTaGTGCCCTGCAGCTATAGCA +
Preference number: 4 (lower is better)
Translates to: HTHIYLSSNPLGFTAWPVMVESG*CPAAIA
Trigger: TGCTATAGCTGCAGGGCACCAGCCACTTTCCACCAT...CACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AAAGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCAAGTCATGGTGGAAAGTaGCTGGTGCCCTGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: KAWREIYWGESTLTISLASHGGK*LVPCSY
Trigger: ATAGCTGCAGGGCACCAGCCACTTTCCACCATGACT...TGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGGAGGGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGTGGTCTTTGTCTTTGTaGCCTAAGCTTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: RREAVFLKVLGVLSNPQRWSLSL*PKLSAT
Trigger: GGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCA...CCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCAGTGGAACTTAATTTaGAGTCCTCCCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRQWNLI*SPPFWK
Trigger: CTTCCAGAAGGGAGGACTCCAAATTAAGTTCCACTG...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTGCTCCTTTTCTAGCTaGACCCATCTCCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPCSFSS*THLRCC
Trigger: GCAACAGCGGAGATGGGTCCAGCTAGAAAAGGAGCA...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp TCTTTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCTCTGGCTCTCTCCGTaGGCTCTCCTGCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLKAPAGNLHFDQVLCGFLWLSP*ALLLLF
Trigger: GAAAAGGAGCAGGAGAGCCCACGGAGAGAGCCAGAG...AAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp CATTTCTTAGGAAACCTGCGATCTACTAAGGGTAAAAGCACAGGCTCAAGGCTCAGACATGGGCAAGTGTaGCCTCCTGCTTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: HFLGNLRSTKGKSTGSRLRHGQV*PPALVS
Trigger: GCTCACCAAAGCAGGAGGCCACACTTGCCCATGTCT...GAGCCTTGAGCCTGTGCTTTTACCCTTAGTAGATCGCAGGTTTCCTAAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp TCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCTGCAGGTTCTTCCTCTaGGCCTCCATGTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: SQSSRSTQQPPEGFFKSTCRFFL*ASMSMW
Trigger: CCACATGGACATGGAGGCCCAGAGGAAGAACCTGCA...GGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp GACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCATTCATGATTTGTACATaGTTGATCGCTTCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: DHQPRTLLGLQEVQAFVAFMICT*LIASCR
Trigger: CCGGCAAGAAGCGATCAACCATGTACAAATCATGAA...TGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp ACACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTACTCCAGCTGGAGCTTaGGGAACATGGTCACCATGC +
Preference number: 4 (lower is better)
Translates to: THTYIFVFQPSWLHSLARTPAGA*GTWSPC
Trigger: GCATGGTGACCATGTTCCCCAAGCTCCAGCTGGAGT...ACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CCA 90 bp AGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGCAACTTGCATTTCTTTaGCTTTGGCGAGGTGACCTC +
Preference number: 4 (lower is better)
Translates to: RIHIDHQPRTLLGLQEVQQLAFL*LWRGDL
Trigger: GAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTG...CTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CAGCCTGAGACTCTGCAGGCGGTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGCAACTTGCATTTCTTTaGCTTTGGCGAGGTGACCTC +
Preference number: 4 (lower is better)
Translates to: QPETLQAVNVFQEDVEVLQLAFL*LWRGDL
Trigger: GAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTG...CAGAACCTCTACATCTTCCTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCATGGAGAGAGATTTATTaGGGAGAATCCACATTGACC +
Preference number: 4 (lower is better)
Translates to: DHQPRTLLGLQEVQAFVAWREIY*GESTLT
Trigger: GGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA...TGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGCCTCCGTTTCTTTCATGATTTGTACATGGTTGATCGCTTCTTGCCGGAGGCTAATCTCACTCAAACCTaGGATCAGCCCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SLRFFHDLYMVDRFLPEANLTQT*DQPPVS
Trigger: GGAGACTGGGGGCTGATCCCAGGTTTGAGTGAGATT...AGCCTCCGGCAAGAAGCGATCAACCATGTACAAATCATGAAAGAAACGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp CCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGATTAAAATGTAGAGTTTaGGGACTGCAGGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PAGNLHFDQVLCGFPSLRLKCRV*GLQEGS
Trigger: GCTTCCCTCCTGCAGTCCCCAAACTCTACATTTTAA...TCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS-3UTR CCA 90 bp CACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGTGCCAAGAGCCTTACTaGGCCTTCAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: HTHIYLSSNPLGFTAWPVCQEPY*AFRKFR
Trigger: CCTGAACTTCCTGAAGGCCCAGTAAGGCTCTTGGCA...CACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548841.5
3UTR CAA 72 bp CTATATTTGAACCTCATGTCTCCATGTCTTCCACCTTaGTCCTCAGAGACACGCTCACCTTTGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: LYLNLMSPCLPP*SSETRSPLPPT
Trigger: GGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTTCAAATATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACGATGATGGCTTTCACTaGTGTGGGAGTCACCAACTG +
Preference number: 4 (lower is better)
Translates to: WREIYWGESTLTISLAPYDDGFH*CGSHQL
Trigger: CAGTTGGTGACTCCCACATCAGTGAAAGCCATCATC...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp GGACACAGACAACACTCAGAGGGTTCTAAAACTGAGTTGAGGAGGTGTGGGTTTGTAGAAATATCCTCTTaGGCCCGAGTTAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GHRQHSEGSKTELRRCGFVEISS*ARVSWA
Trigger: TGCCCAGCTAACTCGGGCTCAAGAGGATATTTCTAC...AAACCCACACCTCCTCAACTCAGTTTTAGAACCCTCTGAGTGTTGTCTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp AGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCGTTTGGACACTTGTaGCCTTTTCTTTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RIHIDHQPRTLLGLQEVQAFGHL*PFLLSF
Trigger: GAAGGACAAAAGAAAAGGTCACAAGTGTCCAAACGC...CTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp AACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGAGACACGCTCACCTTTGTGGGAACCTGCATTTTaGCCAAGTTCTCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: NLMSPCLPPLSSETRSPLWEPAF*PSSLWV
Trigger: AACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCA...CAAAGGTGAGCGTGTCTCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp AGGAGGGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGCTCTCTAGAGACAGCTaGTTGCTACAGTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: RREAVFLKVLGVLSNPQRLSRDS*LLQWNL
Trigger: TAAGTTCCACTGTAGCAAGCAGCTGTCTCTAGAGAG...CCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR GCA 90 bp TTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGAGCGAATGTCAGACACTCTaGATGCTTGCCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLPKQEKNVRHSACLPESECQTL*MLAREL
Trigger: GAGCTCTCTGGCAAGCATGCAGAGTGTCTGACATTC...GCTCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR GCA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCGTTACACCTACTAAGTaGCAGGTGCCAATCACAGCT +
Preference number: 4 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFVTPTK*QVPITA
Trigger: AGCTGTGATTGGCACCTGGCACTTAGTAGGTGTAAC...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp TTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTGAGAATCACTGGCCCTTCTGAGCTTTCATaGAGATCACTGGCATGTCAG +
Preference number: 4 (lower is better)
Translates to: FDQVLCGFPSLRRLRITGPSELS*RSLACQ
Trigger: CTGACATGCCAGTGATCTGCATGAAAGCTCAGAAGG...GCCAGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp GCCTCCATGTCCATGTGGTACACCTTCTTCTTAATATTTGCAGGGGATATCTGCTGGCTTTCACTGATGTaGGAGTCACCAACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ASMSMWYTFFLIFAGDICWLSLM*ESPTVG
Trigger: CCCCACAGTTGGTGACTCCCACATCAGTGAAAGCCA...GCAGATATCCCCTGCAAATATTAAGAAGAAGGTGTACCACATGGACATGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GTTGATCGCTTCTTGCCGGAGGCTCTGGAGGCGTCTATAGAAGATGTACTTATGTGGTCTTTGTCTTTGTaGCCTAAGCTTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: VDRFLPEALEASIEDVLMWSLSL*PKLSAT
Trigger: GGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCA...CATAAGTACATCTTCTATAGACGCCTCCAGAGCCTCCGGCAAGAAGCGATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp CTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTCAGTGGAACTTAATTTaGAGTCCTCCCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LGTCILTKFSVGFRPSEGQWNLI*SPPFWK
Trigger: CTTCCAGAAGGGAGGACTCCAAATTAAGTTCCACTG...ACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp TCTTTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTATTTCTTGGGCTTTGTaGGAACTCGGCGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: SLKAPAGNLHFDQVLCGFISWAL*ELGGSV
Trigger: CACGGACCCGCCGAGTTCCCACAAAGCCCAAGAAAT...AAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGGCCTCCATGTCCATGTaGTACACCTTCTTCTTAATA +
Preference number: 4 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRASMSM*YTFFLI
Trigger: TATTAAGAAGAAGGTGTACCACATGGACATGGAGGC...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGCCTCCATGTCCATGTaGTACACCTTCTTCTTAATA +
Preference number: 4 (lower is better)
Translates to: HQLGTCILTKFSVGFRPSASMSM*YTFFLI
Trigger: TATTAAGAAGAAGGTGTACCACATGGACATGGAGGC...TGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp AACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGAGACACGCTCACCTTTGCTTCTCTGTGCATTCTaGTTGCTGAGATGTCACTCA +
Preference number: 4 (lower is better)
Translates to: NLMSPCLPPLSSETRSPLLLCAF*LLRCHS
Trigger: TGAGTGACATCTCAGCAATCAGAATGCACAGAGAAG...CAAAGGTGAGCGTGTCTCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp CATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTGAGAATCACTTTCGTCCAGAGCTGCTaGTTCCTCTTCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HFDQVLCGFPSLRRLRITFVQSC*FLFTLP
Trigger: AGGAAGAGTGAAGAGGAAGCAGCAGCTCTGGACGAA...AGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp ACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCCTCTCTAGAGACAGCTaGTTGCTACAGTGGAACTTA +
Preference number: 4 (lower is better)
Translates to: TYIFVFQPSWLHSLARAGLSRDS*LLQWNL
Trigger: TAAGTTCCACTGTAGCAAGCAGCTGTCTCTAGAGAG...GCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTACTACTAAGTGCCAGGTaGCAATCACAGCTATCTCGG +
Preference number: 4 (lower is better)
Translates to: AVFLKVLGVLSNPQRVSLLLSAR*QSQLSR
Trigger: CCGAGATAGCTGTGATTGGCACCTGGCACTTAGTAG...TAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp CTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTCGCGATATCTTAAGCTaGGACTCAGAAAACAAATCC +
Preference number: 4 (lower is better)
Translates to: LGTCILTKFSVGFRPSEGRDILS*DSENKS
Trigger: GGATTTGTTTTCTGAGTCGCAGCTTAAGATATCGCG...ACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp GGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCTATCCTAATTCTTCCTaGAAGCGGTTGATGACACAA +
Preference number: 4 (lower is better)
Translates to: GESTLTISLAPYWAFRKFYPNSS*KRLMTQ
Trigger: TTGTGTCATCAACCGCTTCCAGGAAGAATTAGGATA...GAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp TCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTTATCCTAATTCTTCCTaGAAGCGGTTGATGACACAA +
Preference number: 4 (lower is better)
Translates to: SKSSITRASSATRPLKHSYPNSS*KRLMTQ
Trigger: TTGTGTCATCAACCGCTTCCAGGAAGAATTAGGATA...ACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GCCTCCATGTCCATGTGGTACACCTTCTTCTTAATATTTGCAGGGGATATCTGCCCTCTTCACTCTTCCTaGGCCCAATCTCATAGGTCA +
Preference number: 4 (lower is better)
Translates to: ASMSMWYTFFLIFAGDICPLHSS*AQSHRS
Trigger: TGACCTATGAGATTGGGCCCAGGAAGAGTGAAGAGG...GCAGATATCCCCTGCAAATATTAAGAAGAAGGTGTACCACATGGACATGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp CACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGGCCAGAAGGTGCGTTTaGACACTTGTGACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HTHIYLSSNPLGFTAWPVARRCV*TLVTFS
Trigger: AGAAAAGGTCACAAGTGTCCAAACGCACCTTCTGGC...CACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp CTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGTTCTCCTTGTGTTaGAGGATCAAGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LERDLLGRIHIDHQPRTLLFSLC*RIKALL
Trigger: CAACAAGGCCTTGATCCTCCAACACAAGGAGAACAG...TAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp GAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGATCAGGAGAAGGTCATaGTACCTTCCCCCTAAGATC +
Preference number: 4 (lower is better)
Translates to: ERDLLGRIHIDHQPRTLLIRRRS*YLPPKI
Trigger: GATCTTAGGGGGAAGGTACCATGACCTTCTCCTGAT...CAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCAGCTGCTTGCTACAGTaGAACTTAATTTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SLERDLLGRIHIDHQPRTSCLLQ*NLIWSP
Trigger: AGGACTCCAAATTAAGTTCCACTGTAGCAAGCAGCT...GGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp AACAAGCTAAGCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCAAGTTCAGGCTTTTGTaGCAGGAGGACTACACGTCC +
Preference number: 4 (lower is better)
Translates to: NKLSGFICRFLAFLPLVRKFRLL*QEDYTS
Trigger: GGACGTGTAGTCCTCCTGCCACAAAAGCCTGAACTT...GCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGCTTAGCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp TCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTTTGCCTTTAAGAAGATaGAATTGTTACCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SKSSITRASSATRPLKHSLPLRR*NCYQSR
Trigger: CCTGCTTTGGTAACAATTTCATCTTCTTAAAGGCAA...ACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR TCA 90 bp ACACCGTCTATATTTGAACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGAAGACTGGGGCTGTCTTaGTCCTTCTGGCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: TPSIFEPHVSMSSTFVLRRLGLS*SFWLIW
Trigger: CCAAATAAGCCAGAAGGATCAAGACAGCCCCAGTCT...TCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTTCAAATATAGACGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp TTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCATTGAGAATCACTGGCTaGGGGATGCAGTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: FLKVLGVLSNPQRVSLKALRITG*GMQWRL
Trigger: CAGTCTCCACTGCATCCCTCAGCCAGTGATTCTCAA...TGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS-3UTR TCA 90 bp TTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTGAGAATCACTGGCTTTGTTCTCACCTTCTaGGCTTTCATGCAGATCACT +
Preference number: 4 (lower is better)
Translates to: FDQVLCGFPSLRRLRITGFVLTF*AFMQIT
Trigger: AGTGATCTGCATGAAAGCTCAGAAGGTGAGAACAAA...GCCAGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp AATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGACCATTCGTCCAGAGCTaGTGCTTCCTCTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: NCYQSRRRMSDTLHACQRPFVQS*CFLFTL
Trigger: AAGAGTGAAGAGGAAGCAGCAGCTCTGGACGAATGG...TCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GGTATCTCCTTTTGTTCTCACCTTCTGAGCTTTCATGCAGATCACTGGCATGTCTTCGTGTTCATGGTATaGTGGTCCTGGAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: GISFCSHLLSFHADHWHVFVFMV*WSWSIC
Trigger: ACAGATGCTCCAGGACCAGCATACCATGAACACGAA...GACATGCCAGTGATCTGCATGAAAGCTCAGAAGGTGAGAACAAAAGGAGATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp GCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCCTTCTTCTTAATATTTaGAGGGGATATCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: APAGNLHFDQVLCGFPSLLLLNI*RGYLQR
Trigger: TCTTTGCAGATATCCCCTGCAAATATTAAGAAGAAG...GAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp AGCCTCCGTTTCTTTCATGATTTGTACATGGTTGATCGCTTCTTGCCGGAGGCTCAGTGGAACTTAATTTaGAGTCCTCCCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLRFFHDLYMVDRFLPEAQWNLI*SPPFWK
Trigger: CTTCCAGAAGGGAGGACTCCAAATTAAGTTCCACTG...AGCCTCCGGCAAGAAGCGATCAACCATGTACAAATCATGAAAGAAACGGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp CAAGATGAATCTCTTCTTGCCCTTTGGATCTCTCTGCTGAGATTTGGCATTTTCAGGAGGCAGATTTCTTaGGCTTTGTGGGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: QDESLLALWISLLRFGIFRRQIS*ALWELG
Trigger: GCCGAGTTCCCACAAAGCCCAAGAAATCTGCCTCCT...GAAAATGCCAAATCTCAGCAGAGAGATCCAAAGGGCAAGAAGAGATTCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp GTCAATGTTTTCCAGGAAGATGTAGAGGTTCTGGGCCTTGTAGGAAGCCTCCGTTTCATGATTTGTACATaGTTGATCGCTTCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: VNVFQEDVEVLGLVGSLRFMICT*LIASCR
Trigger: CCGGCAAGAAGCGATCAACCATGTACAAATCATGAA...ACGGAGGCTTCCTACAAGGCCCAGAACCTCTACATCTTCCTGGAAAACATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AACAAGCTAAGCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCCAACTTGCATTTCTTTaGCTTTGGCGAGGTGACCTC +
Preference number: 4 (lower is better)
Translates to: NKLSGFICRFLAFLPLVRQLAFL*LWRGDL
Trigger: GAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTG...GCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGCTTAGCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR TCA 90 bp GCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAGCGTTTGGACACTTGTaGCCTTTTCTTTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: AVFLKVLGVLSNPQRVSLAFGHL*PFLLSF
Trigger: GAAGGACAAAAGAAAAGGTCACAAGTGTCCAAACGC...TAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR GCA 90 bp CAAGATGAATCTCTTCTTGCCCTTTGGATCTCTCTGCTGAGATTTGGCATTTTCAGCTCTTTGGTCGCCTaGATTTGCAGGTGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: QDESLLALWISLLRFGIFSSLVA*ICRCLY
Trigger: ATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCT...GAAAATGCCAAATCTCAGCAGAGAGATCCAAAGGGCAAGAAGAGATTCATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR GCA 90 bp GGACACAGACAACACTCAGAGGGTTCTAAAACTGAGTTGAGGAGGTGTGGGTTTAATTTCCTATTTGTATaGCTGTTCCCTAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GHRQHSEGSKTELRRCGFNFLFV*LFPRPR
Trigger: CCTTGGCCTAGGGAACAGGCATACAAATAGGAAATT...AAACCCACACCTCCTCAACTCAGTTTTAGAACCCTCTGAGTGTTGTCTGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp TTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCTCTTCACTCTTCCTaGGCCCAATCTCATAGGTCA +
Preference number: 4 (lower is better)
Translates to: FLKVLGVLSNPQRVSLKAPLHSS*AQSHRS
Trigger: TGACCTATGAGATTGGGCCCAGGAAGAGTGAAGAGG...TGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp TCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCTATGACACCTGGCTCTaGTCTGTATTTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: SQSSRSTQQPPEGFFKSTYDTWL*SVFGIS
Trigger: GGAGATACCAAATACAGACCAGAGCCAGGTGTCATA...GGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CCA 90 bp TTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCAAGAAAAGAAAGAGCCTaGGACCCGAGAGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: FLKVLGVLSNPQRVSLKARKERA*DPRGWK
Trigger: TTTCCAGCCTCTCGGGTCCCAGGCTCTTTCTTTTCT...TGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp AAAGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCAATTGTCCAAAATGTCTaGGAGCTGGGTAGAAATATC +
Preference number: 4 (lower is better)
Translates to: KAWREIYWGESTLTISLAIVQNV*ELGRNI
Trigger: GATATTTCTACCCAGCTCTCAGACATTTTGGACAAT...TGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR TCA 90 bp ACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTGCCTTTAAGAAGATaGAATTGTTACCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TYIFVFQPSWLHSLARAGLPLRR*NCYQSR
Trigger: CCTGCTTTGGTAACAATTTCATCTTCTTAAAGGCAA...GCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR GCA 90 bp AGCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCCTTCTTCTTAATATTTaGAGGGGATATCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLERDLLGRIHIDHQPRTLLLNI*RGYLQR
Trigger: TCTTTGCAGATATCCCCTGCAAATATTAAGAAGAAG...GGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CCA 90 bp CAAGATGAATCTCTTCTTGCCCTTTGGATCTCTCTGCTGAGATTTGGCATTTTCCTGTTCTCCTTGTGTTaGAGGATCAAGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: QDESLLALWISLLRFGIFLFSLC*RIKALL
Trigger: CAACAAGGCCTTGATCCTCCAACACAAGGAGAACAG...GAAAATGCCAAATCTCAGCAGAGAGATCCAAAGGGCAAGAAGAGATTCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CCA 90 bp AACAAGCTAAGCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTTCATGATTTGTACATaGTTGATCGCTTCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: NKLSGFICRFLAFLPLVRFMICT*LIASCR
Trigger: CCGGCAAGAAGCGATCAACCATGTACAAATCATGAA...GCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGCTTAGCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CCA 90 bp TCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCTTTCATGCAGATCACTaGCATGTCAGTGACATATCT +
Preference number: 4 (lower is better)
Translates to: SQSSRSTQQPPEGFFKSTFHADH*HVSDIS
Trigger: AGATATGTCACTGACATGCCAGTGATCTGCATGAAA...GGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp ACACCGTCTATATTTGAACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGATCACTGGCATGTCAGTaGCATATCTGTCCATATTTT +
Preference number: 4 (lower is better)
Translates to: TPSIFEPHVSMSSTFVLRSLACQ*HICPYF
Trigger: AAAATATGGACAGATATGTCACTGACATGCCAGTGA...TCTGAGGACAAAGGTGGAAGACATGGAGACATGAGGTTCAAATATAGACGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR TCA 90 bp TTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCAATTGTCCAAAATGTCTaGGAGCTGGGTAGAAATATC +
Preference number: 4 (lower is better)
Translates to: FLKVLGVLSNPQRVSLKAIVQNV*ELGRNI
Trigger: GATATTTCTACCCAGCTCTCAGACATTTTGGACAAT...TGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551047.5
3UTR CAA 72 bp TCTTTTAAATCATATCCTAATTCTTCCTGGAAGCGGTaGATGACACAATTGACATTGTCCAAAATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SFKSYPNSSWKR*MTQLTLSKMSE
Trigger: CTCAGACATTTTGGACAATGTCAATTGTGTCATCAACCGCTTCCAGGAAGAATTAGGATATGATTTAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp CATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTGGTGCCCTGCAGGCCCTGACCTCCCCCTaGCTGAACATGGTAGAGTCC +
Preference number: 5 (lower is better)
Translates to: HLRPSSAQSWWKVAGALQALTSP*LNMVES
Trigger: GGACTCTACCATGTTCAGCAAGGGGGAGGTCAGGGC...CTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp TGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAATCCAGCCCCTTCTGCTaGTCCGTCCAGGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CPCCRTHLRPSSAQSWWKSSPFC*SVQACS
Trigger: GCTGCAGGCCTGGACGGACAAGCAGAAGGGGCTGGA...TTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGGCTTTGGTGAGCAGATaGGGTCCGGCTTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SASHLTGPSGSSGFCGRRALVSR*GPAWGR
Trigger: CCTGCCCCAAGCCGGACCCAATCTGCTCACCAAAGC...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGAGCCCTGACCTCCCCCTaGCTGAACATGGTAGAGTCC +
Preference number: 5 (lower is better)
Translates to: QPRTLLGLQEVQAFVAGGALTSP*LNMVES
Trigger: GGACTCTACCATGTTCAGCAAGGGGGAGGTCAGGGC...TCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CAGCATGGACGTCACCTCCGAGGCCTTCGTGTTCATGGTATGCTGGTCCTGGAGTGTCTTCCAACCCTCTaGGCTTCACAGCTTGGCCCG +
Preference number: 5 (lower is better)
Translates to: QHGRHLRGLRVHGMLVLECLPTL*ASQLGP
Trigger: CGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACA...CTCCAGGACCAGCATACCATGAACACGAAGGCCTCGGAGGTGACGTCCATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp TCAGTGTCCTTGCTGCCGAACACATCTGCGACCCTCGAGCGCACAGTCATGGTGTGCAGGTGCCTGTATTaGGTCTCCAGGCTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: SVSLLPNTSATLERTVMVCRCLY*VSRLLF
Trigger: GAACAGGAGCCTGGAGACCAAATACAGGCACCTGCA...CACCATGACTGTGCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp CCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGCTCTCAGTGTCCTaGCTGCCGAACACATCTGCG +
Preference number: 5 (lower is better)
Translates to: PSASHLTGPSGSSGFCGRRLSVS*LPNTSA
Trigger: CGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCT...CCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp TTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGAGGCTCTCAGTGTCCTaGCTGCCGAACACATCTGCG +
Preference number: 5 (lower is better)
Translates to: FAEALTGPSGSSGFCGRRRLSVS*LPNTSA
Trigger: CGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCT...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp GAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGAGGCTCTCAGTGTCCTaGCTGCCGAACACATCTGCG +
Preference number: 5 (lower is better)
Translates to: ESGWCPAAIAPLSRIMAMRLSVS*LPNTSA
Trigger: CGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCT...CATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp GGAAGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCCTCCCAGGGCTCCTCTaGGCTCTCAGAGGTCACCTG +
Preference number: 5 (lower is better)
Translates to: GSSPPGLCLCGLSFLPPVLPGLL*ALRGHL
Trigger: CAGGTGACCTCTGAGAGCCAAGAGGAGCCCTGGGAG...GACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp CTGAGGGATGCAGTGGAGACTGGGGCTGTCTTGATCCTTCTGGCTTATTTGGGTGCTTTGGTGAGCAGATaGGGTCCGGCTTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LRDAVETGAVLILLAYLGALVSR*GPAWGR
Trigger: CCTGCCCCAAGCCGGACCCAATCTGCTCACCAAAGC...ACCCAAATAAGCCAGAAGGATCAAGACAGCCCCAGTCTCCACTGCATCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp GAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGGACTCGATGCCTCTTTaGGTGGCAATGAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: ESGWCPAAIAPLSRIMAMDSMPL*VAMRDS
Trigger: GCTGTCCCTCATTGCCACCAAAAGAGGCATCGAGTC...CATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp AGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGACCCATCTCCGCTGTaGCTCCCTGGCCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RIHIDHQPRTLLGLQEVQDPSPL*LPGQVF
Trigger: GAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGTC...CTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp AGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCACAGATTGGGTCCGGCTaGGGGCAGGCACTAATGATA +
Preference number: 5 (lower is better)
Translates to: SPPSPEQVQPPGPLSTVPQIGSG*GQALMI
Trigger: TATCATTAGTGCCTGCCCCAAGCCGGACCCAATCTG...TGGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp TGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTCAGATTTCTTGGGCTTaGTGGGAACTCGGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: CRRSKSSITRASSATRPLQISWA*WELGGS
Trigger: GGACCCGCCGAGTTCCCACAAAGCCCAAGAAATCTG...AAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp ACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGCACTCCAGCTGGAGCTaGGGGAACATGGTCACCATG +
Preference number: 5 (lower is better)
Translates to: TISLAPYWAFRKFRLLWQHSSWS*GNMVTM
Trigger: CATGGTGACCATGTTCCCCAAGCTCCAGCTGGAGTG...CTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp GGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTCTGCAGACCCAGGTaGCTGAATATCCCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: GQSPPSPEQVQPPGPLSTVCRPR*LNIPGP
Trigger: AGGCCCTGGGATATTCAGCAACCTGGGTCTGCAGAC...TGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp GAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGTCTTGGCTTCACAGCTaGGCCCGTGCAGGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: ESGWCPAAIAPLSRIMAMSWLHS*ARAGFL
Trigger: AAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGA...CATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp AAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCTCTGGCATTCCTTCCTTaGGTTCGCTCCGAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: KQGWAPFLRKRTAGHGFSLAFLP*VRSEAF
Trigger: GAAGGCCTCGGAGCGAACCAAAGGAAGGAATGCCAG...AGAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp GGCCTCCAGAAAAGAAAGAGCCTGGGACCCGAGAGGCTGGAAACAGCCCAGGGCTCTTCCTGGAAGCGGTaGATGACACAATTGACATTG +
Preference number: 5 (lower is better)
Translates to: GLQKRKSLGPERLETAQGSSWKR*MTQLTL
Trigger: CAATGTCAATTGTGTCATCAACCGCTTCCAGGAAGA...GCCCTGGGCTGTTTCCAGCCTCTCGGGTCCCAGGCTCTTTCTTTTCTGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp CATCTGCGACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTGGTGCCCTGCAGATCTCTTCTTGCCCTTaGGATCTCTCTGCTGAGATT +
Preference number: 5 (lower is better)
Translates to: HLRPSSAQSWWKVAGALQISSCP*DLSAEI
Trigger: AATCTCAGCAGAGAGATCCAAAGGGCAAGAAGAGAT...CTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGTCGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp GACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAAGGCTCCTGTTCTCCTaGTGTTGGAGGATCAAGGCC +
Preference number: 5 (lower is better)
Translates to: DHQPRTLLGLQEVQAFVARLLFS*CWRIKA
Trigger: GGCCTTGATCCTCCAACACAAGGAGAACAGGAGCCT...TGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp TTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGTGGCTGCTGAGCTCTTaGGTCGCCTGCATTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LTISLAPYWAFRKFRLLWWLLSS*VACICR
Trigger: CCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCA...CCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp AGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCAGCTGGCTCCCAGGGCTCCTCTaGGCTCTCAGAGGTCACCTG +
Preference number: 5 (lower is better)
Translates to: SSRSTQQPPEGFFKSTSWLPGLL*ALRGHL
Trigger: CAGGTGACCTCTGAGAGCCAAGAGGAGCCCTGGGAG...CCAGCTGGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp ACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCGACCCATCTCCGCTGTaGCTCCCTGGCCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TYIFVFQPSWLHSLARAGDPSPL*LPGQVF
Trigger: GAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGTC...GCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp CATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGACAGATTGGGTCCGGCTaGGGGCAGGCACTAATGATA +
Preference number: 5 (lower is better)
Translates to: HQPRTLLGLQEVQAFVAGQIGSG*GQALMI
Trigger: TATCATTAGTGCCTGCCCCAAGCCGGACCCAATCTG...TCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp AGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGTCCAGCCCCTTCTGCTaGTCCGTCCAGGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: REIYWGESTLTISLAPYWSSPFC*SVQACS
Trigger: GCTGCAGGCCTGGACGGACAAGCAGAAGGGGCTGGA...CCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp TCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGGAGGCTGCAGGCAACTaGCATTTCTTTGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SASHLTGPSGSSGFCGRREAAGN*HFFGFG
Trigger: GCCAAAGCCAAAGAAATGCAAGTTGCCTGCAGCCTC...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp TCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGTGTCTTCCAACCCTCTaGGCTTCACAGCTTGGCCCG +
Preference number: 5 (lower is better)
Translates to: SNPLGFTAWPVQAFFAFKCLPTL*ASQLGP
Trigger: CGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACA...CTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS CCA 90 bp ATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTaGCAGGAGGACTACACGTCCAGTGTCAACAGCCGGGGAATATCT +
Preference number: 5 (lower is better)
Translates to: ISLAPYWAFRKFRLL*QEDYTSSVNSRGIS
Trigger: AGATATTCCCCGGCTGTTGACACTGGACGTGTAGTCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS CCA 90 bp CAGTGCCAAGAGCCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTaGCAGGAGGACTACACGTCCAGTGTCAACAGCCGGGGAATATCT +
Preference number: 5 (lower is better)
Translates to: QCQEPYWAFRKFRLL*QEDYTSSVNSRGIS
Trigger: AGATATTCCCCGGCTGTTGACACTGGACGTGTAGTCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGCTCTTGGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS-3UTR CAA 90 bp GGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCGACTCGATGCCTCTTTaGGTGGCAATGAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: GESTLTISLAPYWAFRKFDSMPL*VAMRDS
Trigger: GCTGTCCCTCATTGCCACCAAAAGAGGCATCGAGTC...GAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp AACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGTGGCTGCTGAGCTCTTaGGTCGCCTGCATTTGCAGG +
Preference number: 5 (lower is better)
Translates to: NPLGFTAWPVQAFFAFKKWLLSS*VACICR
Trigger: CCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCA...CTTCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACCTCCCAGGGCTCCTCTaGGCTCTCAGAGGTCACCTG +
Preference number: 5 (lower is better)
Translates to: WREIYWGESTLTISLAPYLPGLL*ALRGHL
Trigger: CAGGTGACCTCTGAGAGCCAAGAGGAGCCCTGGGAG...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGGACCCATCTCCGCTGTaGCTCCCTGGCCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPDPSPL*LPGQVF
Trigger: GAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGTC...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp ATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGCAGATTTCTTGGGCTTaGTGGGAACTCGGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: IDHQPRTLLGLQEVQAFVQISWA*WELGGS
Trigger: GGACCCGCCGAGTTCCCACAAAGCCCAAGAAATCTG...CACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp GCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTCACTCCAGCTGGAGCTaGGGGAACATGGTCACCATG +
Preference number: 5 (lower is better)
Translates to: ADSFVGSWHSFLWFAEALHSSWS*GNMVTM
Trigger: CATGGTGACCATGTTCCCCAAGCTCCAGCTGGAGTG...AAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp CCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGCCTTCAGGAAGTTAGGAAGTTCAGGCTTTaGTGGCAGGAGGACTACACG +
Preference number: 5 (lower is better)
Translates to: PGIPSFGSLRRLLGLQEVRKFRL*WQEDYT
Trigger: CGTGTAGTCCTCCTGCCACAAAAGCCTGAACTTCCT...AACTTCCTGAAGGCCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp AGTGCCAAGAGCCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGAGGAAGTTCAGGCTTTaGTGGCAGGAGGACTACACG +
Preference number: 5 (lower is better)
Translates to: SAKSLTGPSGSSGFCGRRRKFRL*WQEDYT
Trigger: CGTGTAGTCCTCCTGCCACAAAAGCCTGAACTTCCT...CCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGCTCTTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS-3UTR CAA 90 bp GCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCTGAGGATGGGGTAGAGACTGGGGCTGTCTaGATCCTTCTGGCTTATTTG +
Preference number: 5 (lower is better)
Translates to: APFLRKRTAGHGFSEDGVETGAV*ILLAYL
Trigger: CAAATAAGCCAGAAGGATCAAGACAGCCCCAGTCTC...TACCCCATCCTCAGAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp CCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGGATCAAGGCCTTGTaGAGGTTCTCCACCACAGTG +
Preference number: 5 (lower is better)
Translates to: PTLLASQLGPCRLSLPLRRIKAL*RFSTTV
Trigger: CACTGTGGTGGAGAACCTCAACAAGGCCTTGATCCT...TCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp AGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGTGGAGGATCAAGGCCTaGTTGAGGTTCTCCACCACA +
Preference number: 5 (lower is better)
Translates to: RRSKSSITRASSATRPLKWRIKA*LRFSTT
Trigger: TGTGGTGGAGAACCTCAACAAGGCCTTGATCCTCCA...CTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp ATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGCCTGTTCTCCTTGTGTaGGAGGATCAAGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: ISLAPYWAFRKFRLLWQEPVLLV*EDQGLV
Trigger: AACAAGGCCTTGATCCTCCAACACAAGGAGAACAGG...CTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp AGGAGAAGGTCATGGTACCTTCCCCCTAAGATCTCTACCTGCTTCAGCAGAGCAAGGCTCCTGTTCTCCTaGTGTTGGAGGATCAAGGCC +
Preference number: 5 (lower is better)
Translates to: RRRSWYLPPKISTCFSRARLLFS*CWRIKA
Trigger: GGCCTTGATCCTCCAACACAAGGAGAACAGGAGCCT...TGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAGGTACCATGACCTTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp ATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGTGCAGGTGCCTGTATTaGGTCTCCAGGCTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: IDHQPRTLLGLQEVQAFVCRCLY*VSRLLF
Trigger: GAACAGGAGCCTGGAGACCAAATACAGGCACCTGCA...CACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGACTTCATCGGTTCCTGTaGGCTTTCCTCCATGACTGT +
Preference number: 5 (lower is better)
Translates to: HQPRTLLGLQEVQAFVAGLHRFL*AFLHDC
Trigger: ACAGTCATGGAGGAAAGCCAACAGGAACCGATGAAG...TCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp ACACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCTTTGGTGAGCAGATaGGGTCCGGCTTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: THTYIFVFQPSWLHSLARALVSR*GPAWGR
Trigger: CCTGCCCCAAGCCGGACCCAATCTGCTCACCAAAGC...ACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp AGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACAGTGCCAATGATTTGTACATGGTaGATCGCTTCTTGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SPPSPEQVQPPGPLSTVPMICTW*IASCRR
Trigger: CCTCCGGCAAGAAGCGATCAACCATGTACAAATCAT...TGGCACTGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp TCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGGAGGCTGCAGGCAACTaGCATTTCTTTGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SNPLGFTAWPVQAFFAFKEAAGN*HFFGFG
Trigger: GCCAAAGCCAAAGAAATGCAAGTTGCCTGCAGCCTC...CTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS TCA 90 bp AGATCCCAATGTAAGAGTGATTCCTTCATCTCAGGGGCTACCTCTTaGGCCCGAGTTAGCTGGGCAGCCTCAATCCTCAGGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: RSQCKSDSFISGATS*ARVSWAASILRMMA
Trigger: AGCCATCATCCTGAGGATTGAGGCTGCCCAGCTAACTCGGGCTCAAGAGGTAGCCCCTGAGATGAAGGAATCACTCTTACATTGGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp CCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGTCTTCCTGGAAGCGGTaGATGACACAATTGACATTG +
Preference number: 5 (lower is better)
Translates to: PSASHLTGPSGSSGFCGRSSWKR*MTQLTL
Trigger: CAATGTCAATTGTGTCATCAACCGCTTCCAGGAAGA...CCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp GAAGCAAGGATGGGCGCCATTCCTGAGGAAGAGAACCGCTGGACATGGGTTCTCATCTCTTCTTGCCCTTaGGATCTCTCTGCTGAGATT +
Preference number: 5 (lower is better)
Translates to: EARMGAIPEEENRWTWVLISSCP*DLSAEI
Trigger: AATCTCAGCAGAGAGATCCAAAGGGCAAGAAGAGAT...GAGAACCCATGTCCAGCGGTTCTCTTCCTCAGGAATGGCGCCCATCCTTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp CTTTGGTCGCCTGCATTTGCAGGTGCCTGTATTTGGTCTCCAGGCTCCTGTTCTTGCCAGAAGGTGCGTTaGGACACTTGTGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: LWSPAFAGACIWSPGSCSCQKVR*DTCDLF
Trigger: GAAAAGGTCACAAGTGTCCAAACGCACCTTCTGGCA...AGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp TTTGTCCTCAGAGACACGCTCACCTTTGCCTCCCACCTTATGACACCTGGCTCTTGCCAGAAGGTGCGTTaGGACACTTGTGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: FVLRDTLTFASHLMTPGSCQKVR*DTCDLF
Trigger: GAAAAGGTCACAAGTGTCCAAACGCACCTTCTGGCA...AGAGCCAGGTGTCATAAGGTGGGAGGCAAAGGTGAGCGTGTCTCTGAGGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp ACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGAGGATCAAGGCCTaGTTGAGGTTCTCCACCACA +
Preference number: 5 (lower is better)
Translates to: TLTISLAPYWAFRKFRLLWRIKA*LRFSTT
Trigger: TGTGGTGGAGAACCTCAACAAGGCCTTGATCCTCCA...CAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp GGAAGCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCCAGATTGGGTCCGGCTaGGGGCAGGCACTAATGATA +
Preference number: 5 (lower is better)
Translates to: GSSVSQSSRSTQQPPEGFQIGSG*GQALMI
Trigger: TATCATTAGTGCCTGCCCCAAGCCGGACCCAATCTG...GAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGCAGATTTCTTGGGCTTaGTGGGAACTCGGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPQISWA*WELGGS
Trigger: GGACCCGCCGAGTTCCCACAAAGCCCAAGAAATCTG...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp GCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTAAGGAGGCAGATTTCTaGGGCTTTGTGGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: AWREIYWGESTLTISLAPKEADF*GFVGTR
Trigger: CCGAGTTCCCACAAAGCCCAAGAAATCTGCCTCCTT...AGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp TTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCATCCAGCCCCTTCTGCTaGTCCGTCCAGGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: FLKVLGVLSNPQRVSLKASSPFC*SVQACS
Trigger: GCTGCAGGCCTGGACGGACAAGCAGAAGGGGCTGGA...TGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp CACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCACTCCAGCTGGAGCTaGGGGAACATGGTCACCATG +
Preference number: 5 (lower is better)
Translates to: HTHIYLSSNPLGFTAWPVHSSWS*GNMVTM
Trigger: CATGGTGACCATGTTCCCCAAGCTCCAGCTGGAGTG...CACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CAA 90 bp CACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCACTGGGAACCTGCATTTaGACCAAGTTCTCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: HQLGTCILTKFSVGFRPSLGTCI*TKFSVG
Trigger: ACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAG...TGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS CCA 90 bp ATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTaGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGACTACACG +
Preference number: 5 (lower is better)
Translates to: IYWGESTLTISLAPY*AFRKFRLLWQEDYT
Trigger: CGTGTAGTCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTTTTGGTCGCCTGCATTaGCAGGTGCCTGTATTTGGT +
Preference number: 5 (lower is better)
Translates to: HIDHQPRTLLGLQEVQAFFGRLH*QVPVFG
Trigger: ACCAAATACAGGCACCTGCAAATGCAGGCGACCAAA...AAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp AGGCAACTTGCATTTCTTTGGCTTTGGCGAGGTGACCTCAGGGATGTTCAGGTGTTTGGTCGCCTGCATTaGCAGGTGCCTGTATTTGGT +
Preference number: 5 (lower is better)
Translates to: RQLAFLWLWRGDLRDVQVFGRLH*QVPVFG
Trigger: ACCAAATACAGGCACCTGCAAATGCAGGCGACCAAA...CACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp GACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAACAGTGGAACTTAATTaGGAGTCCTCCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: DHQPRTLLGLQEVQAFVATVELN*ESSLLE
Trigger: TTCCAGAAGGGAGGACTCCAAATTAAGTTCCACTGT...TGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp GAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGTGGGGAGAATCCACATaGACCATCAGCCTCGCACCT +
Preference number: 5 (lower is better)
Translates to: ERDLLGRIHIDHQPRTLLWGEST*TISLAP
Trigger: AGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCA...CAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGTCTTGGCTTCACAGCTaGGCCCGTGCAGGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: HTHIYLSSNPLGFTAWPVSWLHS*ARAGFL
Trigger: AAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGA...CACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CAA 90 bp TCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTCGCTGAGGCGCTTACTGGGGAGACTGGGGCTGTCTaGATCCTTCTGGCTTATTTG +
Preference number: 5 (lower is better)
Translates to: SFVGSWHSFLWFAEALTGETGAV*ILLAYL
Trigger: CAAATAAGCCAGAAGGATCAAGACAGCCCCAGTCTC...CCCAGTAAGCGCCTCAGCGAACCAAAGGAAGGAATGCCAGGAACCTACAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp CTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTCTGGGAACCTGCATTTaGACCAAGTTCTCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: LGTCILTKFSVGFRPSEGLGTCI*TKFSVG
Trigger: ACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAG...ACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532262.5
ENST00000551047.5
CDS-3UTR CAA 90 bp TTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTGAGAATCACTGGCCCATGTCTTCCACCTTaGTCCTCAGAGACACGCTCA +
Preference number: 5 (lower is better)
Translates to: FDQVLCGFPSLRRLRITGPCLPP*SSETRS
Trigger: TGAGCGTGTCTCTGAGGACAAAGGTGGAAGACATGG...GCCAGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp GAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGACAATGTTGCCTGCTTaGGAGGTTAAGGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: ERDLLGRIHIDHQPRTLLTMLPA*EVKGTR
Trigger: CCTGGTGCCCTTAACCTCCAAAGCAGGCAACATTGT...CAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGACAATGTTGCCTGCTTaGGAGGTTAAGGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: HTHIYLSSNPLGFTAWPVTMLPA*EVKGTR
Trigger: CCTGGTGCCCTTAACCTCCAAAGCAGGCAACATTGT...CACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp CCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGATGACACAATTGACATaGTCCAAAATGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: PSASHLTGPSGSSGFCGRMTQLT*SKMSES
Trigger: GCTCTCAGACATTTTGGACAATGTCAATTGTGTCAT...CCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTGAGAATCACTGACTCGATGCCTCTTTaGGTGGCAATGAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: HFDQVLCGFPSLRRLRITDSMPL*VAMRDS
Trigger: GCTGTCCCTCATTGCCACCAAAAGAGGCATCGAGTC...AGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACAGGATCAAGGCCTTGTaGAGGTTCTCCACCACAGTG +
Preference number: 5 (lower is better)
Translates to: WREIYWGESTLTISLAPYRIKAL*RFSTTV
Trigger: CACTGTGGTGGAGAACCTCAACAAGGCCTTGATCCT...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTCTTCATCGGTTCCTGTaGGCTTTCCTCCATGACTGT +
Preference number: 5 (lower is better)
Translates to: HIYLSSNPLGFTAWPVQALHRFL*AFLHDC
Trigger: ACAGTCATGGAGGAAAGCCAACAGGAACCGATGAAG...AGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp CATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGATCTAGAGACAGCTGCTaGCTACAGTGGAACTTAATT +
Preference number: 5 (lower is better)
Translates to: HQPRTLLGLQEVQAFVAGSRDSC*LQWNLI
Trigger: AATTAAGTTCCACTGTAGCAAGCAGCTGTCTCTAGA...TCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp GGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTAAGCACATCTAGAGACAGCTGCTaGCTACAGTGGAACTTAATT +
Preference number: 5 (lower is better)
Translates to: GQSPPSPEQVQPPGPLSTSRDSC*LQWNLI
Trigger: AATTAAGTTCCACTGTAGCAAGCAGCTGTCTCTAGA...TGTGCTTAAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp GCCTGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTATGATTTGTACATGGTaGATCGCTTCTTGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: AWREIYWGESTLTISLAPMICTW*IASCRR
Trigger: CCTCCGGCAAGAAGCGATCAACCATGTACAAATCAT...AGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp AATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGACACTCCAGCTGGAGCTaGGGGAACATGGTCACCATG +
Preference number: 5 (lower is better)
Translates to: NCYQSRRRMSDTLHACQRHSSWS*GNMVTM
Trigger: CATGGTGACCATGTTCCCCAAGCTCCAGCTGGAGTG...TCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CAA 90 bp GAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGAGGAAGTTCAGGCTTTaGTGGCAGGAGGACTACACG +
Preference number: 5 (lower is better)
Translates to: ERDLLGRIHIDHQPRTLLRKFRL*WQEDYT
Trigger: CGTGTAGTCCTCCTGCCACAAAAGCCTGAACTTCCT...CAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp GAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTGGAGAGAGATTTATaGGGGAGAATCCACATTGAC +
Preference number: 5 (lower is better)
Translates to: ESTLTISLAPYWAFRKFRLERDL*GRIHID
Trigger: GTCAATGTGGATTCTCCCCAATAAATCTCTCTCCAG...CCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CCACACCGTCTATATTTGAACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAACAATGTTGCCTGCTTaGGAGGTTAAGGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: PHRLYLNLMSPCLPPLSSTMLPA*EVKGTR
Trigger: CCTGGTGCCCTTAACCTCCAAAGCAGGCAACATTGT...TGAGGACAAAGGTGGAAGACATGGAGACATGAGGTTCAAATATAGACGGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp ATTGACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGTCATCCTTCTCCATTTaGGATCACTCTGTCAGTCAC +
Preference number: 5 (lower is better)
Translates to: IDHQPRTLLGLQEVQAFVSSFSI*DHSVSH
Trigger: GTGACTGACAGAGTGATCCAAAATGGAGAAGGATGA...CACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp ACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGATCATCCTTCTCCATTTaGGATCACTCTGTCAGTCAC +
Preference number: 5 (lower is better)
Translates to: TLLASQLGPCRLSLPLRRSSFSI*DHSVSH
Trigger: GTGACTGACAGAGTGATCCAAAATGGAGAAGGATGA...TCTTCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp CATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGACGGTTGATGACACAATaGACATTGTCCAAAATGTCT +
Preference number: 5 (lower is better)
Translates to: HQPRTLLGLQEVQAFVAGRLMTQ*TLSKMS
Trigger: AGACATTTTGGACAATGTCAATTGTGTCATCAACCG...TCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp TGCAGAAGGTCAAAGTCCTCCATCACCAGAGCAAGTTCAGCCACCAGGCCCCTTCGGTTGATGACACAATaGACATTGTCCAAAATGTCT +
Preference number: 5 (lower is better)
Translates to: CRRSKSSITRASSATRPLRLMTQ*TLSKMS
Trigger: AGACATTTTGGACAATGTCAATTGTGTCATCAACCG...AAGGGGCCTGGTGGCTGAACTTGCTCTGGTGATGGAGGACTTTGACCTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp CAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTTGTGGCAGGAGGATTCATCATAGCATCTTaGGAGAAGGAGGCAATTTTT +
Preference number: 5 (lower is better)
Translates to: QPRTLLGLQEVQAFVAGGFIIAS*EKEAIF
Trigger: AAAAATTGCCTCCTTCTCCAAAGATGCTATGATGAA...TCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp GAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGTGCCAGAAGGTGCGTTaGGACACTTGTGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: ERDLLGRIHIDHQPRTLLCQKVR*DTCDLF
Trigger: GAAAAGGTCACAAGTGTCCAAACGCACCTTCTGGCA...CAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CTGAGGGATGCAGTGGAGACTGGGGCTGTCTTGATCCTTCTGGCTTATTTGGGTTCTAGAGACAGCTGCTaGCTACAGTGGAACTTAATT +
Preference number: 5 (lower is better)
Translates to: LRDAVETGAVLILLAYLGSRDSC*LQWNLI
Trigger: AATTAAGTTCCACTGTAGCAAGCAGCTGTCTCTAGA...ACCCAAATAAGCCAGAAGGATCAAGACAGCCCCAGTCTCCACTGCATCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp CATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCAGAAGGTTGAGAATCACTAAGGAGGCAGATTTCTaGGGCTTTGTGGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: HFDQVLCGFPSLRRLRITKEADF*GFVGTR
Trigger: CCGAGTTCCCACAAAGCCCAAGAAATCTGCCTCCTT...AGTGATTCTCAACCTTCTGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp GCCTCCATGTCCATGTGGTACACCTTCTTCTTAATATTTGCAGGGGATATCTGCAAGGAGGCAGATTTCTaGGGCTTTGTGGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: ASMSMWYTFFLIFAGDICKEADF*GFVGTR
Trigger: CCGAGTTCCCACAAAGCCCAAGAAATCTGCCTCCTT...GCAGATATCCCCTGCAAATATTAAGAAGAAGGTGTACCACATGGACATGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp TCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCACCGAGGCTGCAGGCAACTaGCATTTCTTTGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SQSSRSTQQPPEGFFKSTEAAGN*HFFGFG
Trigger: GCCAAAGCCAAAGAAATGCAAGTTGCCTGCAGCCTC...GGTGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp GCAGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAGCTATCTCGGCATGTTaGCTCCCAAAGGACACAGAC +
Preference number: 5 (lower is better)
Translates to: AVFLKVLGVLSNPQRVSLAISAC*LPKDTD
Trigger: GTCTGTGTCCTTTGGGAGCAAACATGCCGAGATAGC...TAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS CCA 90 bp CTCCATTTTGGATCACTCTGTCAGTCACAAAACATCCTGTGTTTCTaGTCCACAGGCCTGGACACACAATGTTGCCTGCTTTGGAGGTTA +
Preference number: 5 (lower is better)
Translates to: LHFGSLCQSQNILCF*STGLDTQCCLLWRL
Trigger: TAACCTCCAAAGCAGGCAACATTGTGTGTCCAGGCCTGTGGACCAGAAACACAGGATGTTTTGTGACTGACAGAGTGATCCAAAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257894.2
ENST00000533372.1
ENST00000551047.5
CDS-3UTR CAA 90 bp AGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCTTTTCTTCCTGGAAGCGGTaGATGACACAATTGACATTG +
Preference number: 5 (lower is better)
Translates to: SSPPGLCLCGLSFLPPVFSSWKR*MTQLTL
Trigger: CAATGTCAATTGTGTCATCAACCGCTTCCAGGAAGA...AAAGACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp AGTAGTCCTCCTGGTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCTTTACAGTGGAACTTAATTaGGAGTCCTCCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: SSPPGLCLCGLSFLPPVFTVELN*ESSLLE
Trigger: TTCCAGAAGGGAGGACTCCAAATTAAGTTCCACTGT...AAAGACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACCAGGAGGACTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp CACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTCCCTCACGTTTCTTTCATGATTaGTACATGGTTGATCGCTTC +
Preference number: 5 (lower is better)
Translates to: HQLGTCILTKFSVGFRPSRFFHD*YMVDRF
Trigger: GAAGCGATCAACCATGTACAAATCATGAAAGAAACG...TGAGGGACGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp AATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGAGAGGCTGCAGGCAACTaGCATTTCTTTGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: NCYQSRRRMSDTLHACQREAAGN*HFFGFG
Trigger: GCCAAAGCCAAAGAAATGCAAGTTGCCTGCAGCCTC...TCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533372.1
ENST00000548841.5
CDS-3UTR CAA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGGGTTCTAAAACTGAGTaGAGGAGGTGTGGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPGSKTE*RRCGFQ
Trigger: CTGAAACCCACACCTCCTCAACTCAGTTTTAGAACC...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp TGGAGAGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACATCTCTTCTTGCCCTTaGGATCTCTCTGCTGAGATT +
Preference number: 5 (lower is better)
Translates to: WREIYWGESTLTISLAPYISSCP*DLSAEI
Trigger: AATCTCAGCAGAGAGATCCAAAGGGCAAGAAGAGAT...GTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp AATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGACCTGTTCTCCTTGTGTaGGAGGATCAAGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: NCYQSRRRMSDTLHACQRPVLLV*EDQGLV
Trigger: AACAAGGCCTTGATCCTCCAACACAAGGAGAACAGG...TCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTGCTTTGGTAACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp ACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGACGTTTCTTTCATGATTaGTACATGGTTGATCGCTTC +
Preference number: 5 (lower is better)
Translates to: TLLASQLGPCRLSLPLRRRFFHD*YMVDRF
Trigger: GAAGCGATCAACCATGTACAAATCATGAAAGAAACG...TCTTCTTAAAGGCAAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp TATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGCAGGCTTTCTTTATGACACAATTGACATaGTCCAAAATGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: YLSSNPLGFTAWPVQAFFMTQLT*SKMSES
Trigger: GCTCTCAGACATTTTGGACAATGTCAATTGTGTCAT...AAAGAAAGCCTGCACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp AGAGATTTATTGGGGAGAATCCACATTGACCATCAGCCTCGCACCTTACTGGGCCGTTTCTTTCATGATTaGTACATGGTTGATCGCTTC +
Preference number: 5 (lower is better)
Translates to: RDLLGRIHIDHQPRTLLGRFFHD*YMVDRF
Trigger: GAAGCGATCAACCATGTACAAATCATGAAAGAAACG...GCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCCAATAAATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS-3UTR CAA 90 bp CCACACCGTCTATATTTGAACCTCATGTCTCCATGTCTTCCACCTTTGTCCTCAGGCTCTGGTCTGTATTaGGTATCTCCTTTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: PHRLYLNLMSPCLPPLSSGSGLY*VSPFVL
Trigger: GAGAACAAAAGGAGATACCAAATACAGACCAGAGCC...TGAGGACAAAGGTGGAAGACATGGAGACATGAGGTTCAAATATAGACGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp TCTTTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTACAGTGGAACTTAATTaGGAGTCCTCCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: SLKAPAGNLHFDQVLCGFTVELN*ESSLLE
Trigger: TTCCAGAAGGGAGGACTCCAAATTAAGTTCCACTGT...AAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp TTGAACAAGCTAAGCGGATTCATTTGTAGGTTCCTGGCATTCCTTCCTTTGGTTATGATTTGTACATGGTaGATCGCTTCTTGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: LNKLSGFICRFLAFLPLVMICTW*IASCRR
Trigger: CCTCCGGCAAGAAGCGATCAACCATGTACAAATCAT...AACCAAAGGAAGGAATGCCAGGAACCTACAAATGAATCCGCTTAGCTTGTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532262.5
CDS-3UTR CAA 90 bp TTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAAAGCAGGGGTAATTTCCTATTaGTATGCCTGTTCCCTAGGC +
Preference number: 5 (lower is better)
Translates to: FLKVLGVLSNPQRVSLKAGVISY*YACSLG
Trigger: GCCTAGGGAACAGGCATACAAATAGGAAATTACCCC...TGCTTTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp GGTATCTCCTTTTGTTCTCACCTTCTGAGCTTTCATGCAGATCACTGGCATGTCATGACACAATTGACATaGTCCAAAATGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: GISFCSHLLSFHADHWHVMTQLT*SKMSES
Trigger: GCTCTCAGACATTTTGGACAATGTCAATTGTGTCAT...GACATGCCAGTGATCTGCATGAAAGCTCAGAAGGTGAGAACAAAAGGAGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp CACACACATATATATTTGTCTTCCAACCCTCTTGGCTTCACAGCTTGGCCCGTGTTCATCATAGCATCTTaGGAGAAGGAGGCAATTTTT +
Preference number: 5 (lower is better)
Translates to: HTHIYLSSNPLGFTAWPVFIIAS*EKEAIF
Trigger: AAAAATTGCCTCCTTCTCCAAAGATGCTATGATGAA...CACGGGCCAAGCTGTGAAGCCAAGAGGGTTGGAAGACAAATATATATGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS-3UTR CAA 90 bp TTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCCGTTCATCATAGCATCTTaGGAGAAGGAGGCAATTTTT +
Preference number: 5 (lower is better)
Translates to: LKAPAGNLHFDQVLCGFPFIIAS*EKEAIF
Trigger: AAAAATTGCCTCCTTCTCCAAAGATGCTATGATGAA...CGGAAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp AGTGTTTCTCAAAGTTCTAGGAGTACTCAGCAACCCCCAGAGGGTTTCTTTAAACCACACCGTCTATATTaGAACCTCATGTCTCCATGT +
Preference number: 5 (lower is better)
Translates to: SVSQSSRSTQQPPEGFFKPHRLY*NLMSPC
Trigger: ACATGGAGACATGAGGTTCAAATATAGACGGTGTGG...TTTAAAGAAACCCTCTGGGGGTTGCTGAGTACTCCTAGAACTTTGAGAAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS-3UTR CAA 90 bp TCTTTAAAAGCACCAGCTGGGAACCTGCATTTTGACCAAGTTCTCTGTGGGTTTCGGTTGATGACACAATaGACATTGTCCAAAATGTCT +
Preference number: 5 (lower is better)
Translates to: SLKAPAGNLHFDQVLCGFRLMTQ*TLSKMS
Trigger: AGACATTTTGGACAATGTCAATTGTGTCATCAACCG...AAACCCACAGAGAACTTGGTCAAAATGCAGGTTCCCAGCTGGTGCTTTTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS GCA 72 bp CTTCCCCTGTTGGCGGGCCATCTGCAGGGGCACACATaGCCGGTGCCTAGACAGAAAGGGCTGCTTGTAGGT +
Preference number: 6 (lower is better)
Translates to: LPLLAGHLQGHT*PVPRQKGLLVG
Trigger: ACCTACAAGCAGCCCTTTCTGTCTAGGCACCGGGCATGTGTGCCCCTGCAGATGGCCCGCCAACAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257894.2
ENST00000532262.5
ENST00000548841.5
CDS CAA 90 bp ACCATCAGCCTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTaGTGGCAGGAGGACTACACGTCCAGTGTCAACAGCCGGGGAATA +
Preference number: 6 (lower is better)
Translates to: TISLAPYWAFRKFRL*WQEDYTSSVNSRGI
Trigger: TATTCCCCGGCTGTTGACACTGGACGTGTAGTCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS CAA 90 bp GCACAGTGCCAAGAGCCTTACTGGGCCTTCAGGAAGTTCAGGCTTTaGTGGCAGGAGGACTACACGTCCAGTGTCAACAGCCGGGGAATA +
Preference number: 6 (lower is better)
Translates to: AQCQEPYWAFRKFRL*WQEDYTSSVNSRGI
Trigger: TATTCCCCGGCTGTTGACACTGGACGTGTAGTCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGCTCTTGGCACTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS TCA 72 bp GAGCCCGAGTTAGCTGGGCAGCCTCAATCCTCAGGATaGTGGCTTTCACTGATGTGGGAGTCACCAACTGTG +
Preference number: 6 (lower is better)
Translates to: EPELAGQPQSSG*WLSLMWESPTV
Trigger: CACAGTTGGTGACTCCCACATCAGTGAAAGCCATCATCCTGAGGATTGAGGCTGCCCAGCTAACTCGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257894.2
ENST00000533372.1
ENST00000551047.5
CDS CAA 72 bp CTCGCACCTTACTGGGCCTTCAGGAAGTTCAGGCTTTaGTGGCAGGAGGACTACACGTCCAGTGTCAACAGC +
Preference number: 6 (lower is better)
Translates to: LAPYWAFRKFRL*WQEDYTSSVNS
Trigger: GCTGTTGACACTGGACGTGTAGTCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGTGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257894.2
CDS TCA 72 bp TGTAAGAGTGATTCCTTCATCTCAGGGGCTACCTCTTaGGCCCGAGTTAGCTGGGCAGCCTCAATCCTCAGG +
Preference number: 6 (lower is better)
Translates to: CKSDSFISGATS*ARVSWAASILR
Trigger: CCTGAGGATTGAGGCTGCCCAGCTAACTCGGGCTCAAGAGGTAGCCCCTGAGATGAAGGAATCACTCTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533372.1
CDS CCA 72 bp TCCTTCCTTTGGTTCGCTCCGAGGCCTTCGTGTTCATaGTATGCTGGTCCTGGAGCATCTGTTCTGGGCTTA +
Preference number: 6 (lower is better)
Translates to: SFLWFAPRPSCS*YAGPGASVLGL
Trigger: TAAGCCCAGAACAGATGCTCCAGGACCAGCATACCATGAACACGAAGGCCTCGGAGCGAACCAAAGGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551047.5
CDS CAA 72 bp CAAGAGCCTTACTGGGCCTTCAGGAAGTTCAGGCTTTaGTGGCAGGAGGACTACACGTCCAGTGTCAACAGC +
Preference number: 6 (lower is better)
Translates to: QEPYWAFRKFRL*WQEDYTSSVNS
Trigger: GCTGTTGACACTGGACGTGTAGTCCTCCTGCCACAAAAGCCTGAACTTCCTGAAGGCCCAGTAAGGCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548841.5
CDS CCA 72 bp GGATCACTCTGTCAGTCACAAAACATCCTGTGTTTCTaGTCCACAGGCCTGGACACACAATGTTGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: GSLCQSQNILCF*STGLDTQCCLL
Trigger: AAGCAGGCAACATTGTGTGTCCAGGCCTGTGGACCAGAAACACAGGATGTTTTGTGACTGACAGAGTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257894.2
ENST00000533372.1
ENST00000551047.5