RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM186A (Homo sapiens)

Ensembl gene IDs: ENSG00000185958

Ensembl transcript IDs: ENST00000327337.6, ENST00000539751.1, ENST00000543096.5, ENST00000543111.5

Found 363 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATACTCATTTATTTCTTCCTTCTGAGGCATCTTCGGGTTTAGACTaGGAAAGGCAGACTGTGCCACTTTGCCATCATGTTAGGGGCCCA +
Preference number: 1 (lower is better)
Translates to: YTHLFLPSEASSGLD*ERQTVPLCHHVRGP
Trigger: TGGGCCCCTAACATGATGGCAAAGTGGCACAGTCTGCCTTTCCCAGTCTAAACCCGAAGATGCCTCAGAAGGAAGAAATAAATGAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR CCA 90 bp TCCCTGCTTTCGTTCTTCTGTTGCTTCATTCTTTATTTGCTTTGCTaGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGA +
Preference number: 1 (lower is better)
Translates to: SLLSFFCCFILYLLC*AFCPILCSKCQEPG
Trigger: TCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGAATGAAGCAACAGAAGAACGAAAGCAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR TCA 90 bp AGAACCTGGACAACTTGCAGTCACAACCCTCTACTGGTAACATTATaGTTTCCCTTCATTACCAATCATAACCACCTTCTAATTCTTCAG +
Preference number: 1 (lower is better)
Translates to: RTWTTCSHNPLLVTL*FPFITNHNHLLILQ
Trigger: CTGAAGAATTAGAAGGTGGTTATGATTGGTAATGAAGGGAAATCATAATGTTACCAGTAGAGGGTTGTGACTGCAAGTTGTCCAGGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR GCA 90 bp GAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTaGTTCATTCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTT +
Preference number: 1 (lower is better)
Translates to: ECTFVLNKSLLSFFC*FILYLLCWAFCPIL
Trigger: AAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGAATGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR GCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAACAGACTGTGCCACTTTaGCATCATGTTAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKQTVPL*HHVRGP
Trigger: TGGGCCCCTAACATGATGGCAAAGTGGCACAGTCTG...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CCA 90 bp TTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCACTTCTGGGTACCCACCCAGCTaGGCCCAGAGTGAATGCATA +
Preference number: 2 (lower is better)
Translates to: LTRDWRDARDFRKVDCTSGYPPS*AQSECI
Trigger: TATGCATTCACTCTGGGCCCAGCTGGGTGGGTACCC...AGAAGTGCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
3UTR CAA 90 bp GGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTaGTTGAACCTTTGTGTTTCCAGTAATGTAGAGCAGAAGATACTC +
Preference number: 2 (lower is better)
Translates to: GAHNDVPFMTQPTPG*LNLCVSSNVEQKIL
Trigger: GAGTATCTTCTGCTCTACATTACTGGAAACACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR TCA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGATGATGTCCCTTTCATaGCTCAGCCTACCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVMMSLS*LSLPQG
Trigger: ACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCAT...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR TCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCATGATGTCCCTTTCATaGCTCAGCCTACCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCMMSLS*LSLPQG
Trigger: ACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCAT...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR GCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGGGGAAAGGCAGACTGTaGCACTTTGCCATCATGTTA +
Preference number: 2 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQGKGRL*HFAIML
Trigger: TAACATGATGGCAAAGTGGCACAGTCTGCCTTTCCC...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAATTCAGGGGTGTCTGCTaGTTTTTAGTTTCCTTCATT +
Preference number: 2 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKFRGVC*FLVSFI
Trigger: AATGAAGGAAACTAAAAACCAGCAGACACCCCTGAA...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR TCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGTTTATTTCTTCCTTCTaGGGCATCTTCGGGTTTAGA +
Preference number: 2 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLFISSF*GIFGFR
Trigger: TCTAAACCCGAAGATGCCTCAGAAGGAAGAAATAAA...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTCTTCGGGTTTAGACTaGGAAAGGCAGACTGTGCCA +
Preference number: 2 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCSSGLD*ERQTVP
Trigger: TGGCACAGTCTGCCTTTCCCAGTCTAAACCCGAAGA...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGTTCAGGGGTGTCTGCTaGTTTTTAGTTTCCTTCATT +
Preference number: 2 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLFRGVC*FLVSFI
Trigger: AATGAAGGAAACTAAAAACCAGCAGACACCCCTGAA...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAACTTTATTTGCTTTGCTaGGCATTTTGCCCAATTCTT +
Preference number: 2 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKLYLLC*AFCPIL
Trigger: AAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAG...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR GCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCATTCTTTATTTGCTTTaGTGGGCATTTTGCCCAATT +
Preference number: 2 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCILYLL*WAFCPI
Trigger: AATTGGGCAAAATGCCCAGCAAAGCAAATAAAGAAT...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR TCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCTTTATTTCTTCCTTCTaGGGCATCTTCGGGTTTAGA +
Preference number: 2 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCFISSF*GIFGFR
Trigger: TCTAAACCCGAAGATGCCTCAGAAGGAAGAAATAAA...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR CAA 90 bp TTGCTTCATTCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTaGTTCAAAATGCCAAGAACCTGGACAACTTGCAGTCACAACCCT +
Preference number: 2 (lower is better)
Translates to: LLHSLFALLGILPNS*FKMPRTWTTCSHNP
Trigger: AGGGTTGTGACTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGAATGAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR TCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGACTACCCCAGGGTTGTTaGACCTTTGTGTTTCCAGTA +
Preference number: 2 (lower is better)
Translates to: SLFALLGILPNSLFKMPRLPQGC*TFVFPV
Trigger: TACTGGAAACACAAAGGTTCAACAACCCTGGGGTAG...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCAAAATGCCAAGAACCTaGACAACTTGCAGTCACAAC +
Preference number: 2 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCKMPRT*TTCSHN
Trigger: GTTGTGACTGCAAGTTGTCCAGGTTCTTGGCATTTT...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR GCA 72 bp ACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTaGTCGGGCCACTCCTGCACTGTGGAGTGTACTTTT +
Preference number: 3 (lower is better)
Translates to: TQEDSVSRSLSS*SGHSCTVECTF
Trigger: AAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CAA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGTCTGTATCCAGGTCCTaGAGCAGCTGCTCGGGCCAC +
Preference number: 3 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVSVSRS*SSCSGH
Trigger: GTGGCCCGAGCAGCTGCTCAAGGACCTGGATACAGA...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR TCA 72 bp GCAAGAGATTTTCGGAAGGTAGACTGCACTTCTAACTaGAGCAGCCTGGGAATATCTGGGTACCCACCCAGC +
Preference number: 3 (lower is better)
Translates to: ARDFRKVDCTSN*SSLGISGYPPS
Trigger: GCTGGGTGGGTACCCAGATATTCCCAGGCTGCTTCAGTTAGAAGTGCAGTCTACCTTCCGAAAATCTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
3UTR GCA 72 bp GTATCCAGGTCCTTGAGCAGCTGCTCGGGCCACTCCTaGACTGTGGAGTGTACTTTTGTTCTCAATAAATCC +
Preference number: 3 (lower is better)
Translates to: VSRSLSSCSGHS*TVECTFVLNKS
Trigger: GGATTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCTCAAGGACCTGGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CAA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCCTGTGGAGTGTACTTTaGTTCTCAATAAATCCCTGC +
Preference number: 3 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCLWSVL*FSINPC
Trigger: GCAGGGATTTATTGAGAACAAAAGTACACTCCACAG...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CAA 90 bp ATCTTCTTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCATGTCTTCTCTGCTATaGGGTAGCTTGAAGTGGACA +
Preference number: 3 (lower is better)
Translates to: IFLTRDWRDARDFRKVDCMSSLL*GSLKWT
Trigger: TGTCCACTTCAAGCTACCCAATAGCAGAGAAGACAT...GCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAAGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
3UTR-3UTR CAA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAAAGAAGATACTCTTTCTaGAGTGGTCATAGTAGTAGC +
Preference number: 3 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKRRYSF*SGHSSS
Trigger: GCTACTACTATGACCACTCAAGAAAGAGTATCTTCT...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CAA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCTGTGGAGTGTACTTTaGTTCTCAATAAATCCCTGC +
Preference number: 3 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLLWSVL*FSINPC
Trigger: GCAGGGATTTATTGAGAACAAAAGTACACTCCACAG...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CAA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCACAGCCTACCCCAGGGTaGTTGAACCTTTGTGTTTCC +
Preference number: 3 (lower is better)
Translates to: WSVLLFSINPCFRSSVASQPTPG*LNLCVS
Trigger: GGAAACACAAAGGTTCAACAACCCTGGGGTAGGCTG...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CAA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCACCTACCCCAGGGTTGTaGAACCTTTGTGTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: WSVLLFSINPCFRSSVASPTPGL*NLCVSS
Trigger: ACTGGAAACACAAAGGTTCAACAACCCTGGGGTAGG...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CAA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGTGCTTCATTCTTTATTaGCTTTGCTGGGCATTTTGC +
Preference number: 3 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVCFILY*LCWAFC
Trigger: GCAAAATGCCCAGCAAAGCAAATAAAGAATGAAGCA...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR CCA 72 bp ATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTaGACAACTTGCAGTCACAACCCTCTACTGGTAACA +
Preference number: 3 (lower is better)
Translates to: ILPNSLFKMPRT*TTCSHNPLLVT
Trigger: TGTTACCAGTAGAGGGTTGTGACTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR-3UTR CAA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAAGAAGATACTCTTTCTaGAGTGGTCATAGTAGTAGC +
Preference number: 3 (lower is better)
Translates to: WSVLLFSINPCFRSSVASRRYSF*SGHSSS
Trigger: GCTACTACTATGACCACTCAAGAAAGAGTATCTTCT...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR TCA 72 bp ACAACTTGCAGTCACAACCCTCTACTGGTAACATTATaGTTTCCCTTCATTACCAATCATAACCACCTTCTA +
Preference number: 3 (lower is better)
Translates to: TTCSHNPLLVTL*FPFITNHNHLL
Trigger: TAGAAGGTGGTTATGATTGGTAATGAAGGGAAATCATAATGTTACCAGTAGAGGGTTGTGACTGCAAGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR GCA 72 bp TGTTGCTTCATTCTTTATTTGCTTTGCTGGGCATTTTaGCCAATTCTTTGTTCAAAATGCCAAGAACCTGGA +
Preference number: 3 (lower is better)
Translates to: CCFILYLLCWAF*PILCSKCQEPG
Trigger: TCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGAATGAAGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCCGAGATATTGGGAGCTaGCCAGGGGAGGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCRDIGS*PGEGGA
Trigger: GGCCCCTCCCTCCCCTGGGCAGCTCCCAATATCTCG...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGCAGCCTGGGAATATCTaGGTACCCACCCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLQPGNI*VPTQLG
Trigger: GCCCAGCTGGGTGGGTACCCAGATATTCCCAGGCTG...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGTCCTCTCTGGCTCGATaGAGCTGTGCGCGCTCAATC +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLSSLAR*SCARSI
Trigger: GATTGAGCGCGCACAGCTCCATCGAGCCAGAGAGGA...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGGGGTACCCACCCAGCTaGGCCCAGAGTGAATGCATA +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLGYPPS*AQSECI
Trigger: TATGCATTCACTCTGGGCCCAGCTGGGTGGGTACCC...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTAGGGCTGCCCTGGAGTaGGAGGGGCCCGAGATATTG +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCRAALE*EGPEIL
Trigger: CAATATCTCGGGCCCCTCCCACTCCAGGGCAGCCCT...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCGCAGTGGCAGGAGGCTaGAATTCCTGGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCAVAGG*NSWSCS
Trigger: TGAGCAGCTCCAGGAATTCCAGCCTCCTGCCACTGC...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp GGGTACCCACCCAGCTGGGCCCAGAGTGAATGCATAGATGTCTTCTCTGCTATTTCATGTGGAGGTTCCTaGCCTCATAGCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GYPPSWAQSECIDVFSAISCGGS*PHSLSQ
Trigger: CTGGGAAAGGCTATGAGGCCAGGAACCTCCACATGA...AATAGCAGAGAAGACATCTATGCATTCACTCTGGGCCCAGCTGGGTGGGTACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR GCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAAGGCTCGATGGAGCTGTaGGCGCTCAATCCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKGSMEL*ALNPRD
Trigger: ATCTCTAGGATTGAGCGCGCACAGCTCCATCGAGCC...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAATGGGACCACTGGACTTaGTTAAGGGTGAGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKWDHWT*LRVRGD
Trigger: ATCGCCCCTCACCCTTAAGCAAGTCCAGTGGTCCCA...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGGGAGGGAGGGGCCTGTaGTGCCGGGAACTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMGGRGL*CRELRR
Trigger: TCTGCGCAGTTCCCGGCACCACAGGCCCCTCCCTCC...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TTCTTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCACTCAGCCTGGGAATATCTaGGTACCCACCCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FLTRDWRDARDFRKVDCTQPGNI*VPTQLG
Trigger: GCCCAGCTGGGTGGGTACCCAGATATTCCCAGGCTG...AGTGCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR TCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAAATGATGTCCCTTTCATaGCTCAGCCTACCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKMMSLS*LSLPQG
Trigger: ACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCAT...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGCTTCACCCTAGCCTCTaGTTGGTTGCTTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLLHPSL*LVAFCC
Trigger: GCAGCAAAAAGCAACCAATCAGAGGCTAGGGTGAAG...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTACGAAGAGTCTGTGGTaGCCCAAGCTTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCTKSLW*PKLPRL
Trigger: GAGCCTGGGAAGCTTGGGGCACCACAGACTCTTCGT...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGGTCCATGTTGCCAGATaGTGCCCAGGGGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLVHVAR*CPGVEG
Trigger: TCCTTCTACCCCTGGGCAGCATCTGGCAACATGGAC...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAATATCAATGTCCTCTCTaGCTCGATGGAGCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKYQCPL*LDGAVR
Trigger: GCGCACAGCTCCATCGAGCCAGAGAGGACATTGATA...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCGGTCTATGGGACCACTaGACTTGCTTAAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCGLWDH*TCLRVR
Trigger: CCTCACCCTTAAGCAAGTCCAGTGGTCCCATAGACC...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGGGAACTGCGCAGAAGTaGATTGACCTCCGTATACCA +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLGTAQK*IDLRIP
Trigger: TGGTATACGGAGGTCAATCCACTTCTGCGCAGTTCC...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp ATCTTCTTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCGGGTACCCACCCAGCTaGGCCCAGAGTGAATGCATA +
Preference number: 4 (lower is better)
Translates to: IFLTRDWRDARDFRKVDCGYPPS*AQSECI
Trigger: TATGCATTCACTCTGGGCCCAGCTGGGTGGGTACCC...GCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR TCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGGAGACAATCTTGATATaGTGGATTGCCCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLETILI*WIAQWG
Trigger: TCCCCACTGGGCAATCCATCATATCAAGATTGTCTC...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp GGGTACCCACCCAGCTGGGCCCAGAGTGAATGCATAGATGTCTTCTCTGCTATTATTTTCTTCAGGCACTaGTTCCGTTTCTGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: GYPPSWAQSECIDVFSAIIFFRH*FRFCPR
Trigger: TCTAGGGCAGAAACGGAATCAGTGCCTGAAGAAAAT...AATAGCAGAGAAGACATCTATGCATTCACTCTGGGCCCAGCTGGGTGGGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR TCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGGACTGCACTTCTAACTaGAGCAGCCTGGGAATATCT +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLDCTSN*SSLGIS
Trigger: AGATATTCCCAGGCTGCTTCAGTTAGAAGTGCAGTC...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGCCAGCTATAAAGGGCTaGCCTGGAGTGGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMPAIKG*PGVGGA
Trigger: GGCCCCTCCCACTCCAGGGCAGCCCTTTATAGCTGG...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGGGGAAAGGCAGACTGTaGCACTTTGCCATCATGTTA +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLGKGRL*HFAIML
Trigger: TAACATGATGGCAAAGTGGCACAGTCTGCCTTTCCC...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGCACCCAGGCATTTACTaGGGTGATGGGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQHPGIY*GDGDSQ
Trigger: CTGGGAGTCCCCATCACCCCAGTAAATGCCTGGGTG...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCCTAACTGAAGCAGCCTaGGAATATCTGGGTACCCAC +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCLTEAA*EYLGTH
Trigger: GTGGGTACCCAGATATTCCCAGGCTGCTTCAGTTAG...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGGCCACTCCTGCACTGTaGAGTGTACTTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLATPAL*SVLLFS
Trigger: TGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGC...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCTGCGCAGAAGTGGATTaGCCTCCGTATACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCCAEVD*PPYTRV
Trigger: GACCCTGGTATACGGAGGTCAATCCACTTCTGCGCA...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAAGACTGCACTTCTAACTaGAGCAGCCTGGGAATATCT +
Preference number: 4 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKDCTSN*SSLGIS
Trigger: AGATATTCCCAGGCTGCTTCAGTTAGAAGTGCAGTC...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTATGATGTCCCTTTCATaGCTCAGCCTACCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCMMSLS*LSLPQG
Trigger: ACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCAT...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTGGCAGGAGAATCGCTTaGACCTGGGAGGCAGAATTT +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCGRRIA*TWEAEF
Trigger: AAATTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCC...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAACTTTCTCCCAGCAACTaGTGTTTGAGACTCATGCCA +
Preference number: 4 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKLSPSN*CLRLMP
Trigger: TGGCATGAGTCTCAAACAGCAGTTGCTGGGAGAAAG...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCTCCAAAGCGTGGGTTTaGTCAGAGGTAAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCSKAWV*SEVRVT
Trigger: TGTCACTCTTACCTCTGAGCAAACCCACGCTTTGGA...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCTTGATATGATGGATTaGCCAGTGGGGAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLLDMMD*PVGREA
Trigger: GGCTTCTCTCCCCACTGGGCAATCCATCATATCAAG...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAGGGAGGGGCCTGTGGTaGCGGGAACTGCGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRGRGLW*RELRRS
Trigger: ACTTCTGCGCAGTTCCCGGCACCACAGGCCCCTCCC...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGGGGAATCGGGATTTCTaGTACCATTCCAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLGNRDF*YHSKGE
Trigger: TTCACCTTTGGAATGGTACCAGAAATCCCGATTCCC...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCCAGCCTGGGAATATCTaGGTACCCACCCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCQPGNI*VPTQLG
Trigger: GCCCAGCTGGGTGGGTACCCAGATATTCCCAGGCTG...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCTAACTGAAGCAGCCTaGGAATATCTGGGTACCCAC +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLLTEAA*EYLGTH
Trigger: GTGGGTACCCAGATATTCCCAGGCTGCTTCAGTTAG...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCAGGCAGATGGGAAATTaGCTGCCCTCAATGAATCAG +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCRQMGN*LPSMNQ
Trigger: CTGATTCATTGAGGGCAGCCAATTTCCCATCTGCCT...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR CAA 72 bp GCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTaGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AARATPALWSVL*FSINPCFRSSV
Trigger: AACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCCAGTATCACCAACTTTaGTTATCGCCCTGGATGACT +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCQYHQL*LSPWMT
Trigger: AGTCATCCAGGGCGATAATCAAAGTTGGTGATACTG...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCCAAAGGGGCCTTGGTTaGGGGGAACCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCQRGLG*GEPLIS
Trigger: AGATATCAAGGGTTCCCCTCAACCAAGGCCCCTTTG...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCATTTTCTTCAGGCACTaGTTCCGTTTCTGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCIFFRH*FRFCPR
Trigger: TCTAGGGCAGAAACGGAATCAGTGCCTGAAGAAAAT...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCCATGTTGCCAGATGCTaGCCAGGGGTAGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCHVARC*PGVEGA
Trigger: GGCTCCTTCTACCCCTGGGCAGCATCTGGCAACATG...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCAGGAAGGGTCCATGTTaGCAGATGCTGCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCRKGPC*QMLPRG
Trigger: ACCCCTGGGCAGCATCTGGCAACATGGACCCTTCCT...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCCAGACTGTGCCACTTTaGCATCATGTTAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCQTVPL*HHVRGP
Trigger: TGGGCCCCTAACATGATGGCAAAGTGGCACAGTCTG...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAATCTCTGCTGCAGTTaGACGTTTGTCAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLNLCCS*TFVKWR
Trigger: TCTCCATTTGACAAACGTCCAACTGCAGCAGAGATT...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCAGATGGCCTCTGTCTaGTCCTCTTGTTGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLQMASV*SSCCLN
Trigger: ATTTAGGCAACAAGAGGACCAGACAGAGGCCATCTG...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGGGGTACCCACCCAGCTaGGCCCAGAGTGAATGCATA +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMGYPPS*AQSECI
Trigger: TATGCATTCACTCTGGGCCCAGCTGGGTGGGTACCC...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCACTTCTCTAACTGAAGCAGCCTaGGAATATCTGGGTACCCAC +
Preference number: 4 (lower is better)
Translates to: LTRDWRDARDFRKVDCTSLTEAA*EYLGTH
Trigger: GTGGGTACCCAGATATTCCCAGGCTGCTTCAGTTAG...AGAAGTGCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR CCA 90 bp GGGTACCCACCCAGCTGGGCCCAGAGTGAATGCATAGATGTCTTCTCTGCTATTTTCTTAACCCGTGATTaGAGGGATGCAAGAGATTTT +
Preference number: 4 (lower is better)
Translates to: GYPPSWAQSECIDVFSAIFLTRD*RDARDF
Trigger: AAAATCTCTTGCATCCCTCCAATCACGGGTTAAGAA...AATAGCAGAGAAGACATCTATGCATTCACTCTGGGCCCAGCTGGGTGGGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR CCA 90 bp ATCTTCTTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCCAGATGGCCTCTGTCTaGTCCTCTTGTTGCGTGTAT +
Preference number: 4 (lower is better)
Translates to: IFLTRDWRDARDFRKVDCQMASV*SSCCVY
Trigger: ATACACGCAACAAGAGGACCAGACAGAGGCCATCTG...GCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAAGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR CCA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGTGTAACTTTGAGACCTaGCGTGGTGGCTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVCNFET*RGGSCL
Trigger: CAGGCATGAGCCACCACGCCAGGTCTCAAAGTTACA...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCAGCTTGGGCTGTATATaGAATAGTGGAGTCCCATTT +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCSLGCI*NSGVPF
Trigger: AAATGGGACTCCACTATTTCATATACAGCCCAAGCT...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAAGTGGCTTCTTTTCCATaGTTGATACTCATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKVASFP*LILISL
Trigger: GAGACTGATGAGTATCAATCATGGAAAAGAAGCCAC...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGGTCTTTCTGTACTGTTaGGACTGTTGGAATATCTCT +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLVFLYC*DCWNIS
Trigger: AGAGATATTCCAACAGTCTCAACAGTACAGAAAGAC...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTCCAGCAACTGCTGTTTaGGACTCATGCCAGACATTT +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCPATAV*DSCQTF
Trigger: AAATGTCTGGCATGAGTCTCAAACAGCAGTTGCTGG...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp TTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCACTTCTGACTGCACTTCTAACTaGAGCAGCCTGGGAATATCT +
Preference number: 4 (lower is better)
Translates to: LTRDWRDARDFRKVDCTSDCTSN*SSLGIS
Trigger: AGATATTCCCAGGCTGCTTCAGTTAGAAGTGCAGTC...AGAAGTGCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR TCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTCTACCCCAGGGTTGTTaGACCTTTGTGTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCLPQGC*TFVFPV
Trigger: TACTGGAAACACAAAGGTTCAACAACCCTGGGGTAG...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCCTTCACCCTAGCCTCTaGTTGGTTGCTTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCLHPSL*LVAFCC
Trigger: GCAGCAAAAAGCAACCAATCAGAGGCTAGGGTGAAG...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCGAGTTCGAAACCGCCTaGCCAACATGGAGAAACACT +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCEFETA*PTWRNT
Trigger: AGTGTTTCTCCATGTTGGTCAGGCGGTTTCGAACTC...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAACCCTCTTGCAAATATTaGTCCTGCCTTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKPSCKY*SCLCFS
Trigger: GGAAAAACAAAGGCAGGAGCAATATTTGCAAGAGGG...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTTGGCTCTGTTGTTCTTaGTTTCCCTCCTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCWLCCS*FPSFIW
Trigger: CCAGATGAAGGAGGGAAAGCAAGAACAACAGAGCCA...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCTTTTGCTTTTCCTCTTaGTCAGCCTGCTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCFCFSS*SACFGV
Trigger: AACTCCAAAGCAGGCTGAGCAAGAGGAAAAGCAAAA...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAAGCAGTATCATCAAATTaGATCATACTGAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKAVSSN*IILSGS
Trigger: GGAGCCACTCAGTATGATCCAATTTGATGATACTGC...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGTCCTGCCACTGTTTCTaGCTCTGTTGTTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLSCHCF*LCCSCF
Trigger: AAAGCAAGAACAACAGAGCCAGAAACAGTGGCAGGA...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCATTTAGTGAGAGGCTaGCCAGAAATAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLHLVRG*PEIGRA
Trigger: AGCTCTTCCTATTTCTGGCCAGCCTCTCACTAAATG...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGCTGTCCAGAAGTGGGTaGAACTCCAGCTATAAAGGG +
Preference number: 4 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVLSRSG*NSSYKG
Trigger: CCCTTTATAGCTGGAGTTCCACCCACTTCTGGACAG...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGTCTTCGGGTTTAGACTaGGAAAGGCAGACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVSSGLD*ERQTVP
Trigger: TGGCACAGTCTGCCTTTCCCAGTCTAAACCCGAAGA...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
3UTR CAA 72 bp GATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTaGAACCTTTGTGTTTCCAGTAATGTAGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: DVPFMTQPTPGL*NLCVSSNVEQK
Trigger: CTTCTGCTCTACATTACTGGAAACACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAGATTATCGCCCTGGATaGCTGTGGAGAAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASDYRPG*LWRRSR
Trigger: CCTGGACCTTCTCCACAGTCATCCAGGGCGATAATC...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCATCTGTGCTCTCATATaGGAGGAGGGTACTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCICALI*EEGTAF
Trigger: GAAAGCAGTACCCTCCTCTCATATGAGAGCACAGAT...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGGGGCTTTATCTAAGGTaGGAGGAACCCCTAACTTCA +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQGLYLR*EEPLTS
Trigger: TGAAGTTAGGGGTTCCTCTCACCTTAGATAAAGCCC...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp TTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCACTTCTAATCTTCTTAACCCGTaGTTGGAGGGATGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: LTRDWRDARDFRKVDCTSNLLNP*LEGCKR
Trigger: TCTCTTGCATCCCTCCAATCACGGGTTAAGAAGATT...AGAAGTGCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR TCA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGCTACCCCAGGGTTGTTaGACCTTTGTGTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVLPQGC*TFVFPV
Trigger: TACTGGAAACACAAAGGTTCAACAACCCTGGGGTAG...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCTGCAACCAATCAGACTaGTTGCAGGCTACCGCTTTA +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCCNQSD*LQATAL
Trigger: TAAAGCGGTAGCCTGCAATCAGTCTGATTGGTTGCA...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGTACTCTGTTCACTTTTaGCATCTGGACTTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLYSVHF*HLDFLE
Trigger: TTCTAGAAAGTCCAGATGGCAAAAGTGAACAGAGTA...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCACCTTCTTCCAGCCGCTaGAGGCTTGACTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASPSSSR*RLDFGS
Trigger: GCTTCCAAAGTCAAGCCTGCAGCGGCTGGAAGAAGG...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAAGTAGAGGCAGGTATCTaGTTTTCTTCGATGATTAAG +
Preference number: 4 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKVEAGI*FSSMIK
Trigger: CTTAATCATCGAAGAAAAGCAGATACCTGCCTCTAC...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCGTCTGGTCCTCTTGTTaGCTAAATTTCTTGCATATG +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCVWSSC*LNFLHM
Trigger: CATATGCAAGAAATTTAGGCAACAAGAGGACCAGAC...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGCAGACTGTGCCACTTTaGCATCATGTTAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMQTVPL*HHVRGP
Trigger: TGGGCCCCTAACATGATGGCAAAGTGGCACAGTCTG...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCGGAGTTCTTTCAGCTTaGGCTGTATATGAAATAGTG +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCGVLSA*AVYEIV
Trigger: CACTATTTCATATACAGCCCAAGCTGAAAGAACTCC...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCTGGACGTTTGTCAAATaGAGATTCACGTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCWTFVK*RFTFDL
Trigger: AAGGTCAAACGTGAATCTCCATTTGACAAACGTCCA...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGCTCCCTTCTCCTGTGTaGCCCCAAATGTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMLPSPV*PQMFRF
Trigger: GAAGCGAAACATTTGGGGCCACACAGGAGAAGGGAG...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGATACACTCTTCCACCTaGGAGATAATGTCATTGGAG +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLIHSST*EIMSLE
Trigger: CTCCAATGACATTATCTCCCAGGTGGAAGAGTGTAT...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGGGCGATCCCAAGGTATaGGCTTTATCTAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQGDPKV*ALSKVR
Trigger: TCTCACCTTAGATAAAGCCCATACCTTGGGATCGCC...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAGGAACGAAGAGTCTGTaGTGCCCCAAGCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRGTKSL*CPKLPR
Trigger: CCTGGGAAGCTTGGGGCACCACAGACTCTTCGTTCC...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCAGGAGCCCAGAGACTTaGAATCTGTCCAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCRSPET*NLSRSG
Trigger: CCCACTTCTGGACAGATTCCAAGTCTCTGGGCTCCT...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGAGCTACCTTGAAATCTaGAGCACTAGGATGGATCAA +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLSYLEI*STRMDQ
Trigger: TTGATCCATCCTAGTGCTCCAGATTTCAAGGTAGCT...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp GGGTACCCACCCAGCTGGGCCCAGAGTGAATGCATAGATGTCTTCTCTGCTATTTCCCAGTATTTTGGATaGCTTTTAGTCGTTTCATTA +
Preference number: 4 (lower is better)
Translates to: GYPPSWAQSECIDVFSAISQYFG*LLVVSL
Trigger: TAATGAAACGACTAAAAGCCATCCAAAATACTGGGA...AATAGCAGAGAAGACATCTATGCATTCACTCTGGGCCCAGCTGGGTGGGTACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR CCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGTCATGTGGAGGTTCCTaGCCTCATAGCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMSCGGS*PHSLSQ
Trigger: CTGGGAAAGGCTATGAGGCCAGGAACCTCCACATGA...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCCAGATGGCCTCTGTCTaGTCCTCTTGTTGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCQMASV*SSCCLN
Trigger: ATTTAGGCAACAAGAGGACCAGACAGAGGCCATCTG...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGTTGGGTAGCTTGAAGTaGACAGATCAACATTCCAGA +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLLGSLK*TDQHSR
Trigger: TCTGGAATGTTGATCTGTCCACTTCAAGCTACCCAA...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGGCAGATGGGAAATTaGCTGCCCTCAATGAATCAG +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCRQMGN*LPSMNQ
Trigger: CTGATTCATTGAGGGCAGCCAATTTCCCATCTGCCT...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTAACTCTGGTAGATTCTaGAGTCTCTTTAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCNSGRF*SLFSHS
Trigger: AGAGTGGCTAAAGAGACTTCAGAATCTACCAGAGTT...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGTCTGATCCTTTGTTTTaGTCTGCCTTTCGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQSDPLF*SAFRGP
Trigger: AGGACCTCGAAAGGCAGATCAAAACAAAGGATCAGA...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAGGTAAGAGTGACAGCTaGCACCCAGGCATTTACTGG +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASGKSDS*HPGIYW
Trigger: CCAGTAAATGCCTGGGTGTCAGCTGTCACTCTTACC...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCGTGGTGAAAGGAACTTaGGCTACCTTGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCVVKGT*ATLKSG
Trigger: TCCAGATTTCAAGGTAGCTCAAGTTCCTTTCACCAC...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTATCAGGTTCTTCTTCTaGGCCTCCACATCAACAAAA +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCIRFFF*ASTSTK
Trigger: TTTTGTTGATGTGGAGGCTCAGAAGAAGAACCTGAT...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGATTTTCTTCAGGCACTaGTTCCGTTTCTGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQIFFRH*FRFCPR
Trigger: TCTAGGGCAGAAACGGAATCAGTGCCTGAAGAAAAT...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp TTCTTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCACTTGCTATTGGGTAGCTTaGAGTGGACAGATCAACATT +
Preference number: 4 (lower is better)
Translates to: FLTRDWRDARDFRKVDCTCYWVA*SGQINI
Trigger: AATGTTGATCTGTCCACTTCAAGCTACCCAATAGCA...AGTGCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR TCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAGGCAGGAGAATCGCTTaGACCTGGGAGGCAGAATTT +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASGRRIA*TWEAEF
Trigger: AAATTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCC...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGGAGTTCGAAACCGCCTaGCCAACATGGAGAAACACT +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMEFETA*PTWRNT
Trigger: AGTGTTTCTCCATGTTGGTCAGGCGGTTTCGAACTC...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGCGAGTCATTATCCGATaGACATTGTTCATTATTTCA +
Preference number: 4 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLRVIIR*TLFIIS
Trigger: TGAAATAATGAACAATGTGCATCGGATAATGACTCG...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGAGAGAGCTCCTTTTCTaGTTCACTTGTCTCATGTGC +
Preference number: 4 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVRELLF*FTCLMC
Trigger: GCACATGAGACAAGTGAAGCAGAAAAGGAGCTCTCT...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTTTCCACTTTAATCTCTaGTGCAGTTGGACGTTTGTC +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCFHFNL*CSWTFV
Trigger: GACAAACGTCCAACTGCAGCAGAGATTAAAGTGGAA...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGGGAACCCTTGATATCTaGAAAGGAGTAGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQGTLDI*KGVEET
Trigger: GGTCTCTTCTACTCCTTTGCAGATATCAAGGGTTCC...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGGTAGAGGCAGGTATCTaGTTTTCTTCGATGATTAAG +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLVEAGI*FSSMIK
Trigger: CTTAATCATCGAAGAAAAGCAGATACCTGCCTCTAC...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGGTCTGGTCCTCTTGTTaGCTAAATTTCTTGCATATG +
Preference number: 4 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLVWSSC*LNFLHM
Trigger: CATATGCAAGAAATTTAGGCAACAAGAGGACCAGAC...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTTTCTTCAGGGGTGTCTaGTGGTTTTTAGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCFFRGV*WFLVSF
Trigger: GAAGGAAACTAAAAACCAGCAGACACCCCTGAAGAA...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAGGGGACTCCAAAGCGTaGGTTTGCTCAGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASGDSKA*VCSEVR
Trigger: TCTTACCTCTGAGCAAACCCACGCTTTGGAGTCCCC...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGCTTCGATTTCTGAAATaGTCTATGGGACCACTGGAC +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQLRFLK*SMGPLD
Trigger: GTCCAGTGGTCCCATAGACCATTTCAGAAATCGAAG...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGGTGTCTCGAAGTATCTaGGTTTCTTCGGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQVSRSI*VSSEVS
Trigger: TGACACTTCCGAAGAAACCCAGATACTTCGAGACAC...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTTCATTATGTTGTTCCTaGCATGCTGGATCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCSLCCS*HAGSAY
Trigger: ATAGGCTGATCCAGCATGCCAGGAACAACATAATGA...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCATCATGTGGAGGTTCCTaGCCTCATAGCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASSCGGS*PHSLSQ
Trigger: CTGGGAAAGGCTATGAGGCCAGGAACCTCCACATGA...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp ATCTTCTTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCTTGGGTAGCTTGAAGTaGACAGATCAACATTCCAGA +
Preference number: 4 (lower is better)
Translates to: IFLTRDWRDARDFRKVDCLGSLK*TDQHSR
Trigger: TCTGGAATGTTGATCTGTCCACTTCAAGCTACCCAA...GCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAAGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR TCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGCAAATTGGATCATACTaGGTGGCTCCACTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMQIGSY*VAPLGF
Trigger: GAAGCCTAGTGGAGCCACTCAGTATGATCCAATTTG...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTCTAATTGGTGACTTCTaGAAATGCAATCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCLIGDF*KCNPGI
Trigger: TATGCCAGGATTGCATTTTCAGAAGTCACCAATTAG...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTTTTATTTCTTCCTTCTaGGGCATCTTCGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCFISSF*GIFGFR
Trigger: TCTAAACCCGAAGATGCCTCAGAAGGAAGAAATAAA...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCGGGGCACCATTACTTTaGGTTTCTTGGTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCGAPLL*VSWYLK
Trigger: TTTCAGATACCAAGAAACCCAAAGTAATGGTGCCCC...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGTCATTATGTTGTTCCTaGCATGCTGGATCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQSLCCS*HAGSAY
Trigger: ATAGGCTGATCCAGCATGCCAGGAACAACATAATGA...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCTTGGGTAGCTTGAAGTaGACAGATCAACATTCCAGA +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCLGSLK*TDQHSR
Trigger: TCTGGAATGTTGATCTGTCCACTTCAAGCTACCCAA...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGCCTGAAGAACGTGATTaGAGGGATGCAAGAGATTTT +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQPEERD*RDARDF
Trigger: AAAATCTCTTGCATCCCTCCAATCACGTTCTTCAGG...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGAAAATGCCAAGAACCTaGACAACTTGCAGTCACAAC +
Preference number: 4 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVKMPRT*TTCSHN
Trigger: GTTGTGACTGCAAGTTGTCCAGGTTCTTGGCATTTT...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGATGTAACTTTGAGACCTaGCGTGGTGGCTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRCNFET*RGGSCL
Trigger: CAGGCATGAGCCACCACGCCAGGTCTCAAAGTTACA...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCACATTGTGGTGCCTATaGGTTCCTGTAGCATACCTT +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCTLWCL*VPVAYL
Trigger: AAGGTATGCTACAGGAACTCATAGGCACCACAATGT...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGACTAGGTTTGGCCTCTaGGACTTTCTGTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMTRFGL*DFLSTF
Trigger: AAAAGTGGACAGAAAGTCTCAGAGGCCAAACCTAGT...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGGCCATTATGGCTTCCTaGAATTCTTCGAGGTTACTC +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMAIMAS*NSSRLL
Trigger: GAGTAACCTCGAAGAATTTCAGGAAGCCATAATGGC...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCATGCAACCAATCAGACTaGTTGCAGGCTACCGCTTTA +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASCNQSD*LQATAL
Trigger: TAAAGCGGTAGCCTGCAATCAGTCTGATTGGTTGCA...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTCCTTTGTTTTGATCTaGCTTTCGAGGTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCSFVLI*LSRSSS
Trigger: GCTAGAGGACCTCGAAAGGCAGATCAAAACAAAGGA...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAGGGAAAGGCAGACTGTaGCACTTTGCCATCATGTTA +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASGKGRL*HFAIML
Trigger: TAACATGATGGCAAAGTGGCACAGTCTGCCTTTCCC...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTTTCTCAATAAATCCCTaGTTTCGTTCTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCFSINP*FRSSVA
Trigger: AGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAA...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCTTATCCCAGAGTCCTTaGTCTCTTTTCTTTGGACTT +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCLSQSP*SLFFGL
Trigger: AAGTCCAAAGAAAAGAGACCAAGGACTCTGGGATAA...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCGTGTCTCGAAGTATCTaGGTTTCTTCGGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCVSRSI*VSSEVS
Trigger: TGACACTTCCGAAGAAACCCAGATACTTCGAGACAC...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGAGGGGTTTGGTATACTaGTGTCCTATATTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQRGLVY*CPIFGE
Trigger: TTCACCAAATATAGGACACCAGTATACCAAACCCCT...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCGGGAATCGGGATTTCTaGTACCATTCCAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCGNRDF*YHSKGE
Trigger: TTCACCTTTGGAATGGTACCAGAAATCCCGATTCCC...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGCCAGACATTTGTTCTTaGCCCTCTTGCAAATATTGC +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMPDICS*PSCKYC
Trigger: GCAATATTTGCAAGAGGGTCAAGAACAAATGTCTGG...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAGTTGAGGGGAACCCTTaGTATCTGCAAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRVEGNP*YLQRSR
Trigger: TCTACTCCTTTGCAGATATCAAGGGTTCCCCTCAAC...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGTGCTATTGGGTAGCTTaGAGTGGACAGATCAACATT +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMCYWVA*SGQINI
Trigger: AATGTTGATCTGTCCACTTCAAGCTACCCAATAGCA...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGATTATTTCACTCAGCTaGATATCAATGTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVIISLS*ISMSSL
Trigger: CAGAGAGGACATTGATATGCAGCTGAGTGAAATAAT...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGTTCTCAATAAATCCCTaGTTTCGTTCTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQFSINP*FRSSVA
Trigger: AGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAA...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGTGTGCTATCCAGTGGTaGTGTTCATCAACATCCATT +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMCAIQW*CSSTSI
Trigger: AATGGATGTTGATGAACACCACCACTGGATAGCACA...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGATTTGTGCTATCCAGTaGTGGTGTTCATCAACATCC +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMICAIQ*WCSSTS
Trigger: GGATGTTGATGAACACCACCACTGGATAGCACAAAT...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCTTAGGAAAGCCATTATaGCTTCCTGAAATTCTTCGA +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCLGKPL*LPEILR
Trigger: TCGAAGAATTTCAGGAAGCCATAATGGCTTTCCTAA...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCGAGACCTCCGACATTTaGAACTTCTTAGTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCETSDI*NFLVVK
Trigger: TTTCACCACTAAGAAGTTCCAAATGTCGGAGGTCTC...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTTCCCAGTATTTTGGATaGCTTTTAGTCGTTTCATTA +
Preference number: 4 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCSQYFG*LLVVSL
Trigger: TAATGAAACGACTAAAAGCCATCCAAAATACTGGGA...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGCCTGAAGAACGTGATTaGAGGGATGCAAGAGATTTT +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMPEERD*RDARDF
Trigger: AAAATCTCTTGCATCCCTCCAATCACGTTCTTCAGG...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAGCCACTCCTGCACTGTaGAGTGTACTTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRATPAL*SVLLFS
Trigger: TGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGC...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCGATGATATCCTTTACTaGGAATGGGATCTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCDDILY*EWDLKV
Trigger: AACCTTGAGATCCCATTCTCAGTAAAGGATATCATC...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCCAAGTTGATGAGACTTaGCTTGTTTGGTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCQVDET*LVWSTL
Trigger: AAGAGTTGACCAAACAAGTCAAGTCTCATCAACTTG...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR TCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGCTCTTTTCCTTCATATaGCCGCTGTACATCTTTCAA +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMLFSFI*PLYIFQ
Trigger: TTGAAAGATGTACAGCGGTCATATGAAGGAAAAGAG...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCACTTGTCTCATGTaGATACACAGTGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCFTCLM*IHSGTL
Trigger: CAAAGTTCCACTGTGTATGCACATGAGACAAGTGAA...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAAGCCTGCTTTGGAGTTaGCTGTTTTTGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRSLLWS*LFLLFL
Trigger: AAGGAAGAGCAAAAACAGGCAACTCCAAAGCAGGCT...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCATTCTTCAGGGGTGTCTaGTGGTTTTTAGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASFFRGV*WFLVSF
Trigger: GAAGGAAACTAAAAACCAGCAGACACCCCTGAAGAA...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCATTCTTTATTTGCTTTaGTGGGCATTTTGCCCAATT +
Preference number: 4 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCILYLL*WAFCPI
Trigger: AATTGGGCAAAATGCCCAGCAAAGCAAATAAAGAAT...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCGCTTCATTCTTTATTTaGTTTGCTGGGCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCASFFI*FAGHFA
Trigger: GGCAAAATGCCCAGCAAAGCAAATAAAGAATGAAGC...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAGGACTAAGGATATTTTaGGGCTCTCTTCTCATGATG +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASGLRIF*GSLLMM
Trigger: CATCATGAGAAGAGAGCCCCAAAATATCCTTAGTCC...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCAGGGGTTTGGTATACTaGTGTCCTATATTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCRGLVY*CPIFGE
Trigger: TTCACCAAATATAGGACACCAGTATACCAAACCCCT...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGTCCCAGTATTTTGGATaGCTTTTAGTCGTTTCATTA +
Preference number: 4 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVSQYFG*LLVVSL
Trigger: TAATGAAACGACTAAAAGCCATCCAAAATACTGGGA...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR TCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACTTGGAGACAATCTTaGTATGATGGATTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRTWRQS*YDGLPS
Trigger: ACTGGGCAATCCATCATATCAAGATTGTCTCCAAGT...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCATCAGAAGCAACAGGTTaGTGTCGTAGTTCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASSEATG*CRSSVK
Trigger: TTTAACTGAACTACGACAGCAACCTGTTGCTTCTGA...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAGCTTCATTCTTTATTTaGTTTGCTGGGCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASASFFI*FAGHFA
Trigger: GGCAAAATGCCCAGCAAAGCAAATAAAGAATGAAGC...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCAGGCCAGAATGTTaGCAAGAGTCTTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRTRPEC*QESFLL
Trigger: TAAGAGAAAAGACTCTTGCCAACATTCTGGCCTGGT...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGATTATCACTCAGATTTaGTCCAGAGGTCTCATATAC +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMIITQI*SRGLIY
Trigger: GTATATGAGACCTCTGGACCAAATCTGAGTGATAAT...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGTCTGGAGCACTAGGATaGATCAATACTGATTTAGAT +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMSGALG*INTDLD
Trigger: ATCTAAATCAGTATTGATCCATCCTAGTGCTCCAGA...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCATTCAGGGGTGTCTGCTaGTTTTTAGTTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASFRGVC*FLVSFI
Trigger: AATGAAGGAAACTAAAAACCAGCAGACACCCCTGAA...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAAAAATGCCAAGAACCTaGACAACTTGCAGTCACAAC +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRKMPRT*TTCSHN
Trigger: GTTGTGACTGCAAGTTGTCCAGGTTCTTGGCATTTT...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGATACTTGTTCCACTTTTaGCACCTTGGCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRYLFHF*HLGSLF
Trigger: AAACAAAGAGCCAAGGTGGCAAAAGTGGAACAAGTA...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR GCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGATTCTTTGTTCAAAATaGCAAGAACCTGGACAACTT +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMILCSK*QEPGQL
Trigger: AAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAAT...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCATTCTTTGTTCAAAATaGCAAGAACCTGGACAACTT +
Preference number: 4 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCILCSK*QEPGQL
Trigger: AAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAAT...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR GCA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGATTCTTTATTTGCTTTaGTGGGCATTTTGCCCAATT +
Preference number: 4 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMILYLL*WAFCPI
Trigger: AATTGGGCAAAATGCCCAGCAAAGCAAATAAAGAAT...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCACTTTATTTGCTTTGCTaGGCATTTTGCCCAATTCTT +
Preference number: 4 (lower is better)
Translates to: WSVLLFSINPCFRSSVASLYLLC*AFCPIL
Trigger: AAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAG...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CCA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGATCCTGTAGCATACCTTaGATTTCTGAAACCTTTGTA +
Preference number: 4 (lower is better)
Translates to: SLFALLGILPNSLFKMPRSCSIP*ISETFV
Trigger: TACAAAGGTTTCAGAAATCCAAGGTATGCTACAGGA...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS TCA 90 bp GGGGAGGGAGGGGCCTGTGGTGCCGGGAACTGCGCAGAAGTGGATTaGCCTCCGTATACCAGGGTCTGTCCAGAGGAACGAAGAGTCTGT +
Preference number: 5 (lower is better)
Translates to: GEGGACGAGNCAEVD*PPYTRVCPEERRVC
Trigger: ACAGACTCTTCGTTCCTCTGGACAGACCCTGGTATACGGAGGTCAATCCACTTCTGCGCAGTTCCCGGCACCACAGGCCCCTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 90 bp AATCTGTCCAGAAGTGGGTGGAACTCCAGCTATAAAGGGCTGCCCTaGAGTGGGAGGGGCCCGAGATATTGGGAGCTGCCCAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: NLSRSGWNSSYKGLP*SGRGPRYWELPRGG
Trigger: CCCTCCCCTGGGCAGCTCCCAATATCTCGGGCCCCTCCCACTCCAGGGCAGCCCTTTATAGCTGGAGTTCCACCCACTTCTGGACAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 90 bp CTTGGAATCTGTCCAGAAGTGGGTGGAACTCCAGCTATAAAGGGCTaGCCTGGAGTGGGAGGGGCCCGAGATATTGGGAGCTGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LGICPEVGGTPAIKG*PGVGGARDIGSCPG
Trigger: CCCTGGGCAGCTCCCAATATCTCGGGCCCCTCCCACTCCAGGGCAGCCCTTTATAGCTGGAGTTCCACCCACTTCTGGACAGATTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 90 bp AGGAGAAAGAGGAGCCCAGAGACTTGGAATCTGTCCAGAAGTGGGTaGAACTCCAGCTATAAAGGGCTGCCCTGGAGTGGGAGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: RRKRSPETWNLSRSG*NSSYKGLPWSGRGP
Trigger: CGGGCCCCTCCCACTCCAGGGCAGCCCTTTATAGCTGGAGTTCCACCCACTTCTGGACAGATTCCAAGTCTCTGGGCTCCTCTTTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 90 bp TCCAGGAGGTCCCCAGGGATGGAAGAGGCTTCAGGAACTAAGGGCTaGCCAGGAGAAAGAGGAGCCCAGAGACTTGGAATCTGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: SRRSPGMEEASGTKG*PGERGAQRLGICPE
Trigger: TTCTGGACAGATTCCAAGTCTCTGGGCTCCTCTTTCTCCTGGGCAGCCCTTAGTTCCTGAAGCCTCTTCCATCCCTGGGGACCTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS-3UTR CAA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGCTGCGCAGAAGTGGATaGACCTCCGTATACCAGGGT +
Preference number: 5 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLLRRSG*TSVYQG
Trigger: ACCCTGGTATACGGAGGTCAATCCACTTCTGCGCAG...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS CCA 90 bp TATGATGGATTGCCCAGTGGGGAGAGAAGCCTTCGATTTCTGAAATaGTCTATGGGACCACTGGACTTGCTTAAGGGTGAGGGGCGATCC +
Preference number: 5 (lower is better)
Translates to: YDGLPSGERSLRFLK*SMGPLDLLKGEGRS
Trigger: GGATCGCCCCTCACCCTTAAGCAAGTCCAGTGGTCCCATAGACCATTTCAGAAATCGAAGGCTTCTCTCCCCACTGGGCAATCCATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS-3UTR CAA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGCTCCAAAGCGTGGGTTaGCTCAGAGGTAAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLLQSVG*LRGKSD
Trigger: GTCACTCTTACCTCTGAGCAAACCCACGCTTTGGAG...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTTCTGTATCCAGGTCCTaGAGCAGCTGCTCGGGCCAC +
Preference number: 5 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCSVSRS*SSCSGH
Trigger: GTGGCCCGAGCAGCTGCTCAAGGACCTGGATACAGA...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS TCA 90 bp CTTGATATGATGGATTGCCCAGTGGGGAGAGAAGCCTTCGATTTCTaGAATGGTCTATGGGACCACTGGACTTGCTTAAGGGTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: LDMMDCPVGREAFDF*NGLWDHWTCLRVRG
Trigger: GCCCCTCACCCTTAAGCAAGTCCAGTGGTCCCATAGACCATTTCAGAAATCGAAGGCTTCTCTCCCCACTGGGCAATCCATCATATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS TCA 90 bp CCTCTGTCTGGTCCTCTTGTTGCGTGTATCATTTTCTTCAGGCACTaGTTCCGTTTCTGCCCTAGAGACTTCTGCTTCTCAGTCCAGACC +
Preference number: 5 (lower is better)
Translates to: PLSGPLVACIIFFRH*FRFCPRDFCFSVQT
Trigger: GGTCTGGACTGAGAAGCAGAAGTCTCTAGGGCAGAAACGGAATCAGTGCCTGAAGAAAATGATACACGCAACAAGAGGACCAGACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR CAA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGGCTGCAGTTGGACGTTaGTCAAATGGAGATTCACGT +
Preference number: 5 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLAAVGR*SNGDSR
Trigger: ACGTGAATCTCCATTTGACAAACGTCCAACTGCAGC...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCCCCAGCAACTGCTGTTaGAGACTCATGCCAGACATT +
Preference number: 5 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCPSNCC*RLMPDI
Trigger: AATGTCTGGCATGAGTCTCAAACAGCAGTTGCTGGG...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGCTGCAGATAGGGAGATaGCTCAGCAGTGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVLQIGR*LSSGRR
Trigger: CCTCCTGCCACTGCTGAGCAATCTCCCTATCTGCAG...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAACCTACCCCAGGGTTGTaGAACCTTTGTGTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKPTPGL*NLCVSS
Trigger: ACTGGAAACACAAAGGTTCAACAACCCTGGGGTAGG...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGCATAAAAGTGTAACTTaGAGACCTGGCGTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLHKSVT*RPGVVA
Trigger: AGCCACCACGCCAGGTCTCAAAGTTACACTTTTATG...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGGCAAAGGGGCCTTGGTaGAGGGGAACCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQAKGPW*RGTLDI
Trigger: GATATCAAGGGTTCCCCTCAACCAAGGCCCCTTTGC...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCGAGGAGCCCAGAGACTaGGAATCTGTCCAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCEEPRD*ESVQKW
Trigger: CCACTTCTGGACAGATTCCAAGTCTCTGGGCTCCTC...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGCTCTGTCTGGTCCTCTaGTTGCCTAAATTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLLCLVL*LPKFLA
Trigger: TGCAAGAAATTTAGGCAACAAGAGGACCAGACAGAG...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAGCAGTATCATCAAATaGGATCATACTGAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLSSIIK*DHTEWL
Trigger: GAGCCACTCAGTATGATCCAATTTGATGATACTGCT...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAATTGTTCTTGACCCTCTaGCAAATATTGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKLFLTL*QILLLP
Trigger: AGGCAGGAGCAATATTTGCAAGAGGGTCAAGAACAA...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGACAGGAAGGGTCCATGTaGCCAGATGCTGCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: SLFALLGILPNSLFKMPRQEGSM*PDAAQG
Trigger: CCCCTGGGCAGCATCTGGCAACATGGACCCTTCCTG...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAAAGAGACCTCCGACATTaGGAACTTCTTAGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKRDLRH*ELLSGE
Trigger: TTCACCACTAAGAAGTTCCAAATGTCGGAGGTCTCT...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCCTCAGTATCCAGGGCTaGTCTATAGGAGGGAATCGG +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCLSIQG*SIGGNR
Trigger: CCGATTCCCTCCTATAGACAAGCCCTGGATACTGAG...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGGGGGGCACCATTACTTaGGGTTTCTTGGTATCTGAA +
Preference number: 5 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLGGTIT*GFLVSE
Trigger: TTCAGATACCAAGAAACCCAAAGTAATGGTGCCCCC...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCCTGCTATTGGGTAGCTaGAAGTGGACAGATCAACAT +
Preference number: 5 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCLLLGS*KWTDQH
Trigger: ATGTTGATCTGTCCACTTCAAGCTACCCAATAGCAG...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCCAGCCTACCCCAGGGTaGTTGAACCTTTGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCQPTPG*LNLCVS
Trigger: GGAAACACAAAGGTTCAACAACCCTGGGGTAGGCTG...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS TCA 90 bp TCGATGGAGCTGTGCGCGCTCAATCCTAGAGATGATATCCTTTACTaGGAATGGGATCTCAAGGTTAGGGAGCATCAAAGGACTAAGGAT +
Preference number: 5 (lower is better)
Translates to: SMELCALNPRDDILY*EWDLKVREHQRTKD
Trigger: ATCCTTAGTCCTTTGATGCTCCCTAACCTTGAGATCCCATTCTCAGTAAAGGATATCATCTCTAGGATTGAGCGCGCACAGCTCCATCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 90 bp TCTCTGCTATTGGGTAGCTTGAAGTGGACAGATCAACATTCCAGATaGCCTCTGTCTGGTCCTCTTGTTGCGTGTATCATTTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SLLLGSLKWTDQHSR*PLSGPLVACIIFFR
Trigger: CCTGAAGAAAATGATACACGCAACAAGAGGACCAGACAGAGGCCATCTGGAATGTTGATCTGTCCACTTCAAGCTACCCAATAGCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR CAA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCAGGACTAAGGATATTTaGGGGCTCTCTTCTCATGAT +
Preference number: 5 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCRTKDI*GLSSHD
Trigger: ATCATGAGAAGAGAGCCCCAAAATATCCTTAGTCCT...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGAACCAGGCCAGAATGTaGGCAAGAGTCTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLNQARM*ARVFSL
Trigger: AAGAGAAAAGACTCTTGCCAACATTCTGGCCTGGTT...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAGAGATGTTTTCTTTTaGCTTCAGTGGGTGACTTTG +
Preference number: 5 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLRDVFF*LQWVTL
Trigger: CAAAGTCACCCACTGAAGCAAAAAGAAAACATCTCT...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCATACTTGTTCCACTTTaGCCACCTTGGCTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCILVPL*PPWLFV
Trigger: AACAAAGAGCCAAGGTGGCAAAAGTGGAACAAGTAT...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAAGGTCTTTCTGTACTGTaGAGACTGTTGGAATATCTC +
Preference number: 5 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKGLSVL*RLLEYL
Trigger: GAGATATTCCAACAGTCTCAACAGTACAGAAAGACC...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGCTGGCTCTGTTGTTCTaGCTTTCCCTCCTTCATCTG +
Preference number: 5 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQLALLF*LSLLHL
Trigger: CAGATGAAGGAGGGAAAGCAAGAACAACAGAGCCAG...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAATGGGACCACTGGACTaGCTTAAGGGTGAGGGGCGA +
Preference number: 5 (lower is better)
Translates to: WSVLLFSINPCFRSSVASMGPLD*LKGEGR
Trigger: TCGCCCCTCACCCTTAAGCAAGTCCAGTGGTCCCAT...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCGCTTTGCTGGGCATTTaGCCCAATTCTTTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCALLGI*PNSLFK
Trigger: TTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGC...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGCAGGCCAGTCTTTGTTaGCATAAAAGTGTAACTTTG +
Preference number: 5 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLQASLC*HKSVTL
Trigger: CAAAGTTACACTTTTATGCAAACAAAGACTGGCCTG...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAACTTCAGTGGGTGACTTaGATTTATCTTCAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKLQWVT*IYLQKR
Trigger: CCTTTTCTGAAGATAAATCAAAGTCACCCACTGAAG...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCCTCAGTATCCAGGGCTaGTCTATAGGAGGGAATCGG +
Preference number: 5 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCLSIQG*SIGGNR
Trigger: CCGATTCCCTCCTATAGACAAGCCCTGGATACTGAG...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTAGTCGTTTCATTATGTaGTTCCTGGCATGCTGGATC +
Preference number: 5 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCSRFIM*FLACWI
Trigger: GATCCAGCATGCCAGGAACAACATAATGAAACGACT...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGCTGTCTGGTCCTCTTGTaGCCTAAATTTCTTGCATAT +
Preference number: 5 (lower is better)
Translates to: LEGIWTQEDSVSRSLSSCCLVLL*PKFLAY
Trigger: ATATGCAAGAAATTTAGGCAACAAGAGGACCAGACA...GCAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTCTCTGTCTGGTCCTCTaGTTGCCTAAATTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCLCLVL*LPKFLA
Trigger: TGCAAGAAATTTAGGCAACAAGAGGACCAGACAGAG...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCACTTCTCTGCTATTGGGTAGCTaGAAGTGGACAGATCAACAT +
Preference number: 5 (lower is better)
Translates to: LTRDWRDARDFRKVDCTSLLLGS*KWTDQH
Trigger: ATGTTGATCTGTCCACTTCAAGCTACCCAATAGCAG...AGAAGTGCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR CAA 90 bp TTCTTAACCCGTGATTGGAGGGATGCAAGAGATTTTCGGAAGGTAGACTGCACTCTCTGTCTGGTCCTCTaGTTGCGTGTATCATTTTCT +
Preference number: 5 (lower is better)
Translates to: FLTRDWRDARDFRKVDCTLCLVL*LRVSFS
Trigger: AGAAAATGATACACGCAACAAGAGGACCAGACAGAG...AGTGCAGTCTACCTTCCGAAAATCTCTTGCATCCCTCCAATCACGGGTTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539751.1
CDS-3UTR CAA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAACATTCTTTATTTGCTTaGCTGGGCATTTTGCCCAAT +
Preference number: 5 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKHSLFA*LGILPN
Trigger: ATTGGGCAAAATGCCCAGCAAAGCAAATAAAGAATG...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAATGCTTCATTCTTTATTaGCTTTGCTGGGCATTTTGC +
Preference number: 5 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKCFILY*LCWAFC
Trigger: GCAAAATGCCCAGCAAAGCAAATAAAGAATGAAGCA...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TTAGGGGCCCATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGGCTTTCGTTCTTCTGTaGCTTCATTCTTTATTTGCT +
Preference number: 5 (lower is better)
Translates to: LGAHNDVPFMTQPTPGLLAFVLL*LHSLFA
Trigger: AGCAAATAAAGAATGAAGCAACAGAAGAACGAAAGC...CAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATGGGCCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS TCA 90 bp ATCTTTTTGAGCTGGTTGAATACGTGTATCATTTTCTTCAGGCACTaGTTCCGTTTCTGCCCTAGAGACTTCTGCTTCTCAGTCCAGACC +
Preference number: 5 (lower is better)
Translates to: IFLSWLNTCIIFFRH*FRFCPRDFCFSVQT
Trigger: GGTCTGGACTGAGAAGCAGAAGTCTCTAGGGCAGAAACGGAATCAGTGCCTGAAGAAAATGATACACGTATTCAACCAGCTCAAAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327337.6
ENST00000543096.5
ENST00000543111.5
CDS CCA 90 bp GAACTCAGTATCCAGGGCTTGTCTATAGGAGGGAATCGGGATTTCTaGTACCATTCCAAAGGTGAAATCTGTGATGTTCTGAGTAGAGTA +
Preference number: 5 (lower is better)
Translates to: ELSIQGLSIGGNRDF*YHSKGEICDVLSRV
Trigger: TACTCTACTCAGAACATCACAGATTTCACCTTTGGAATGGTACCAGAAATCCCGATTCCCTCCTATAGACAAGCCCTGGATACTGAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327337.6
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAATTTTTCTTCTGCATCTaGAAGTTTCTGCTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKFFFCI*KFLLKH
Trigger: ATGCTTCAGCAGAAACTTCAAGATGCAGAAGAAAAA...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGTTGATGAGACTTGACTaGTTTGGTCAACTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLLMRLD*FGQLFL
Trigger: AAGGAAGAGTTGACCAAACAAGTCAAGTCTCATCAA...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCACTCATGCCAGACATTaGTTCTTGACCCTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCTHARH*FLTLLQ
Trigger: TTGCAAGAGGGTCAAGAACAAATGTCTGGCATGAGT...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGAGAGACCTCCGACATTaGGAACTTCTTAGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQRDLRH*ELLSGE
Trigger: TTCACCACTAAGAAGTTCCAAATGTCGGAGGTCTCT...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTATCAGTGTAAGGGGTTaGGTATACTGGTGTCCTATA +
Preference number: 5 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCISVRG*VYWCPI
Trigger: TATAGGACACCAGTATACCAAACCCCTTACACTGAT...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGCTGCTCGGGCCACTCCTGCACTGTGGAGTGTACTTTTGTTCTCAATAAAATTACTTTGGGTTTCTaGGTATCTGAAACTGAACTC +
Preference number: 5 (lower is better)
Translates to: SSCSGHSCTVECTFVLNKITLGF*VSETEL
Trigger: GAGTTCAGTTTCAGATACCAAGAAACCCAAAGTAAT...TTTATTGAGAACAAAAGTACACTCCACAGTGCAGGAGTGGCCCGAGCAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGAGTCGTTTCATTATGTaGTTCCTGGCATGCTGGATC +
Preference number: 5 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQSRFIM*FLACWI
Trigger: GATCCAGCATGCCAGGAACAACATAATGAAACGACT...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCATGTCTTCTCTGCTATaGGGTAGCTTGAAGTGGACA +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCMSSLL*GSLKWT
Trigger: TGTCCACTTCAAGCTACCCAATAGCAGAGAAGACAT...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCCCTACCCCAGGGTTGTaGAACCTTTGTGTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCPTPGL*NLCVSS
Trigger: ACTGGAAACACAAAGGTTCAACAACCCTGGGGTAGG...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTCTGTGGAGTGTACTTTaGTTCTCAATAAATCCCTGC +
Preference number: 5 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCLWSVL*FSINPC
Trigger: GCAGGGATTTATTGAGAACAAAAGTACACTCCACAG...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS TCA 90 bp TCAGAGACCTCCGACATTTGGAACTTCTTAGTGGTGAAAGGAACTTaGGCTACCTTGAAATCTGGAGCACTAGGATGGATCAATACTGAT +
Preference number: 5 (lower is better)
Translates to: SETSDIWNFLVVKGT*ATLKSGALGWINTD
Trigger: ATCAGTATTGATCCATCCTAGTGCTCCAGATTTCAAGGTAGCTCAAGTTCCTTTCACCACTAAGAAGTTCCAAATGTCGGAGGTCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 90 bp GTTGGACGTTTGTCAAATGGAGATTCACGTTTGACCTTCCTAAATTaGTCCAACATCATCATACTTGTTCCACTTTTGCCACCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: VGRLSNGDSRLTFLN*SNIIILVPLLPPWL
Trigger: GAGCCAAGGTGGCAAAAGTGGAACAAGTATGATGATGTTGGAGCAATTTAGGAAGGTCAAACGTGAATCTCCATTTGACAAACGTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTAGAGGGTATTTGGACCCAAGAAGATTCTGTATCCAGGTCCTTGAGCAGCTGTATTATCACTCAGATTaGGTCCAGAGGTCTCATATA +
Preference number: 5 (lower is better)
Translates to: SRGYLDPRRFCIQVLEQLYYHSD*VQRSHI
Trigger: TATATGAGACCTCTGGACCAAATCTGAGTGATAATA...CAGCTGCTCAAGGACCTGGATACAGAATCTTCTTGGGTCCAAATACCCTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCTGCCACCTTGGCTCTTaGTTTCAGTTAAAGAGAGAT +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCCHLGS*FQLKRD
Trigger: ATCTCTCTTTAACTGAAACAAAGAGCCAAGGTGGCA...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAATGGAGATTCACGTTaGACCTTCCTAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCNGDSR*TFLNCS
Trigger: GGAGCAATTTAGGAAGGTCAAACGTGAATCTCCATT...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCATCAGTGTAAGGGGTTaGGTATACTGGTGTCCTATA +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCISVRG*VYWCPI
Trigger: TATAGGACACCAGTATACCAAACCCCTTACACTGAT...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CATAATGATGTCCCTTTCATGACTCAGCCTACCCCAGGGTTGTTGAACCTTTGTTGTCTGGTCCTCTTGTaGCCTAAATTTCTTGCATAT +
Preference number: 5 (lower is better)
Translates to: HNDVPFMTQPTPGLLNLCCLVLL*PKFLAY
Trigger: ATATGCAAGAAATTTAGGCAACAAGAGGACCAGACA...ACAAAGGTTCAACAACCCTGGGGTAGGCTGAGTCATGAAAGGGACATCATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGACAGCCTACCCCAGGGTaGTTGAACCTTTGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: SLFALLGILPNSLFKMPRQPTPG*LNLCVS
Trigger: GGAAACACAAAGGTTCAACAACCCTGGGGTAGGCTG...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGCTGTGGAGTGTACTTTaGTTCTCAATAAATCCCTGC +
Preference number: 5 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVLWSVL*FSINPC
Trigger: GCAGGGATTTATTGAGAACAAAAGTACACTCCACAG...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp GGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGACTTCTAGAGGGTATTaGGACCCAAGAAGATTCTGT +
Preference number: 5 (lower is better)
Translates to: GHFAQFFVQNAKNLDNLQTSRGY*DPRRFC
Trigger: ACAGAATCTTCTTGGGTCCAAATACCCTCTAGAAGT...CTGCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS TCA 90 bp CCTTGTCTAAAATATTGTCCATATTGTCCTCAGTATCACCAACTTTaGTTATCGCCCTGGATGACTGTGGAGAAGGTCCAGGTAACACTT +
Preference number: 5 (lower is better)
Translates to: PCLKYCPYCPQYHQL*LSPWMTVEKVQVTL
Trigger: AAGTGTTACCTGGACCTTCTCCACAGTCATCCAGGGCGATAATCAAAGTTGGTGATACTGAGGACAATATGGACAATATTTTAGACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 90 bp TTATGTTGTTCCTGGCATGCTGGATCAGCCTATAGGCAATGTACTTaGGGAATAAGTATCCCAACTGAACTGTGTCCATATGAAGTATCT +
Preference number: 5 (lower is better)
Translates to: LCCSWHAGSAYRQCT*GISIPTELCPYEVS
Trigger: AGATACTTCATATGGACACAGTTCAGTTGGGATACTTATTCCGCAAGTACATTGCCTATAGGCTGATCCAGCATGCCAGGAACAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327337.6
ENST00000543096.5
ENST00000543111.5
CDS CCA 90 bp GCTTTTAACGTGTCCGGTAACAACTCCATTTGTGCTATCCAGTGGTaGTGTTCATCAACATCCATTAGAGTCATCTCAGACAAAACATCA +
Preference number: 5 (lower is better)
Translates to: AFNVSGNNSICAIQW*CSSTSIRVISDKTS
Trigger: TGATGTTTTGTCTGAGATGACTCTAATGGATGTTGATGAACACCACCACTGGATAGCACAAATGGAGTTGTTACCGGACACGTTAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGTTACTCTGTTCACTTTaGCCATCTGGACTTTCTAGA +
Preference number: 5 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVLLCSL*PSGLSR
Trigger: TCTAGAAAGTCCAGATGGCAAAAGTGAACAGAGTAA...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGTTCGGAACAGTCTTTTaGTCAAAAGCCTTTCCTATG +
Preference number: 5 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVFGTVF*SKAFPM
Trigger: CATAGGAAAGGCTTTTGACAAAAAGACTGTTCCGAA...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGTGTTGCCTAAATTTCTaGCATATGTCAGAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVCCLNF*HMSEVL
Trigger: CAGAACCTCTGACATATGCAAGAAATTTAGGCAACA...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCAGAAGATACTCTTTCTaGAGTGGTCATAGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCRRYSF*SGHSSS
Trigger: GCTACTACTATGACCACTCAAGAAAGAGTATCTTCT...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGCCCTCAATGAATCAGACTGATTGCAGGCCAGTCTTTGTTTGCATAAAAGTGCATTCTTTATTTGCTTaGCTGGGCATTTTGCCCAAT +
Preference number: 5 (lower is better)
Translates to: LPSMNQTDCRPVFVCIKVHSLFA*LGILPN
Trigger: ATTGGGCAAAATGCCCAGCAAAGCAAATAAAGAATG...CACTTTTATGCAAACAAAGACTGGCCTGCAATCAGTCTGATTCATTGAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS GCA 90 bp TTCGTTACTGAGATCTCGTATTATCTTCAGAGAGAGCTCCTTTTCTaGTTCACTTGTCTCATGTGCATACACAGTGGAACTTTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: FVTEISYYLQRELLF*FTCLMCIHSGTLEV
Trigger: AACTTCCAAAGTTCCACTGTGTATGCACATGAGACAAGTGAAGCAGAAAAGGAGCTCTCTCTGAAGATAATACGAGATCTCAGTAACGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 90 bp ATAGCTTTTAACGTGTCCGGTAACAACTCCATTTGTGCTATCCAGTaGTGGTGTTCATCAACATCCATTAGAGTCATCTCAGACAAAACA +
Preference number: 5 (lower is better)
Translates to: IAFNVSGNNSICAIQ*WCSSTSIRVISDKT
Trigger: TGTTTTGTCTGAGATGACTCTAATGGATGTTGATGAACACCACCACTGGATAGCACAAATGGAGTTGTTACCGGACACGTTAAAAGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCATTATCCGATGCACATaGTTCATTATTTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCIIRCT*FIISLS
Trigger: GCTGAGTGAAATAATGAACAATGTGCATCGGATAAT...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCACCTTTTCTGCTTCACTaGTCTCATGTGCATACACAG +
Preference number: 5 (lower is better)
Translates to: WSVLLFSINPCFRSSVASPFLLH*SHVHTQ
Trigger: CTGTGTATGCACATGAGACAAGTGAAGCAGAAAAGG...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCATCAGTATCACCAACTTaGATTATCGCCCTGGATGAC +
Preference number: 5 (lower is better)
Translates to: WSVLLFSINPCFRSSVASSVSPT*IIALDD
Trigger: GTCATCCAGGGCGATAATCAAAGTTGGTGATACTGA...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp CTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACAACTTGCTTTGACCTTCCTAAATaGCTCCAACATCATCATACT +
Preference number: 5 (lower is better)
Translates to: LGILPNSLFKMPRTWTTCFDLPK*LQHHHT
Trigger: AGTATGATGATGTTGGAGCAATTTAGGAAGGTCAAA...GCAAGTTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCCTTCTAATTTCACCTTaGCCCTCTTTGTCCAATGAC +
Preference number: 5 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCLLISP*PSLSND
Trigger: GTCATTGGACAAAGAGGGCAAAGGTGAAATTAGAAG...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGGCCAGACATTTGTTCTaGACCCTCTTGCAAATATTG +
Preference number: 5 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMARHLF*TLLQIL
Trigger: CAATATTTGCAAGAGGGTCAAGAACAAATGTCTGGC...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAAGTGGTGAAAGGAACTaGAGCTACCTTGAAATCTGG +
Preference number: 5 (lower is better)
Translates to: WSVLLFSINPCFRSSVASSGERN*SYLEIW
Trigger: CCAGATTTCAAGGTAGCTCAAGTTCCTTTCACCACT...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAGGGGGCACCATTACTTaGGGTTTCTTGGTATCTGAA +
Preference number: 5 (lower is better)
Translates to: SLFALLGILPNSLFKMPRGGTIT*GFLVSE
Trigger: TTCAGATACCAAGAAACCCAAAGTAATGGTGCCCCC...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCACTGCTATTGGGTAGCTaGAAGTGGACAGATCAACAT +
Preference number: 5 (lower is better)
Translates to: WSVLLFSINPCFRSSVASLLLGS*KWTDQH
Trigger: ATGTTGATCTGTCCACTTCAAGCTACCCAATAGCAG...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGGCTTTGCTGGGCATTTaGCCCAATTCTTTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMALLGI*PNSLFK
Trigger: TTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGC...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGACATAAAAGTGTAACTTaGAGACCTGGCGTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SLFALLGILPNSLFKMPRHKSVT*RPGVVA
Trigger: AGCCACCACGCCAGGTCTCAAAGTTACACTTTTATG...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGATTGTGTTTTCATTTTTaGGGTCCCTTCTTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: SLFALLGILPNSLFKMPRLCFHF*GPFFQP
Trigger: CGGCTGGAAGAAGGGACCCAAAAAATGAAAACACAA...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGTGCTTCATTCTTTATTaGCTTTGCTGGGCATTTTGC +
Preference number: 5 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMCFILY*LCWAFC
Trigger: GCAAAATGCCCAGCAAAGCAAATAAAGAATGAAGCA...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCTTCAACTTCTAGAGGGTATTaGGACCCAAGAAGATTCTGT +
Preference number: 5 (lower is better)
Translates to: WSVLLFSINPCFRSSVASTSRGY*DPRRFC
Trigger: ACAGAATCTTCTTGGGTCCAAATACCCTCTAGAAGT...TGAAGCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGCAGGCCAGTCTTTGTTaGCATAAAAGTGTAACTTTG +
Preference number: 5 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMQASLC*HKSVTL
Trigger: CAAAGTTACACTTTTATGCAAACAAAGACTGGCCTG...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp AGCAGAAGATACTCTTTCTTGAGTGGTCATAGTAGTAGCCCAGAAATGAAGATGATTACTTTGGGTTTCTaGGTATCTGAAACTGAACTC +
Preference number: 5 (lower is better)
Translates to: SRRYSFLSGHSSSPEMKMITLGF*VSETEL
Trigger: GAGTTCAGTTTCAGATACCAAGAAACCCAAAGTAAT...CATCTTCATTTCTGGGCTACTACTATGACCACTCAAGAAAGAGTATCTTCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp ACTGTGGAGTGTACTTTTGTTCTCAATAAATCCCTGCTTTCGTTCTTCTGTTGCATTTTGCCCAATTCTTaGTTCAAAATGCCAAGAACC +
Preference number: 5 (lower is better)
Translates to: TVECTFVLNKSLLSFFCCILPNS*FKMPRT
Trigger: GGTTCTTGGCATTTTGAACAAAGAATTGGGCAAAAT...GCAACAGAAGAACGAAAGCAGGGATTTATTGAGAACAAAAGTACACTCCACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS TCA 90 bp TACTGGTGTCCTATATTTGGTGAAATGGGACTGAAATGTTCTAAATaGTTCTATAGCAAAAGTGTCTCGAAGTATCTGGGTTTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: YWCPIFGEMGLKCSK*FYSKSVSKYLGFFG
Trigger: TCCGAAGAAACCCAGATACTTCGAGACACTTTTGCTATAGAATCATTTAGAACATTTCAGTCCCATTTCACCAAATATAGGACACCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327337.6
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGATGTTGCCTAAATTTCTaGCATATGTCAGAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SLFALLGILPNSLFKMPRCCLNF*HMSEVL
Trigger: CAGAACCTCTGACATATGCAAGAAATTTAGGCAACA...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAAGAAGATACTCTTTCTaGAGTGGTCATAGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: SLFALLGILPNSLFKMPRRRYSF*SGHSSS
Trigger: GCTACTACTATGACCACTCAAGAAAGAGTATCTTCT...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS TCA 90 bp ATACTCATCAGTCTCATCTTCCTGATAGAAATCACCTTTCTTCAATaGTACGTTATCTTTAGTGCTGTCTTCGGAAATATCTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: ILISLIFLIEITFLQ*YVIFSAVFGNIFRS
Trigger: GCTTCTGAAGATATTTCCGAAGACAGCACTAAAGATAACGTATCATTGAAGAAAGGTGATTTCTATCAGGAAGATGAGACTGATGAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS-3UTR CAA 90 bp TCTTTATTTGCTTTGCTGGGCATTTTGCCCAATTCTTTGTTCAAAATGCCAAGAGCTTTCGTTCTTCTGTaGCTTCATTCTTTATTTGCT +
Preference number: 5 (lower is better)
Translates to: SLFALLGILPNSLFKMPRAFVLL*LHSLFA
Trigger: AGCAAATAAAGAATGAAGCAACAGAAGAACGAAAGC...TCTTGGCATTTTGAACAAAGAATTGGGCAAAATGCCCAGCAAAGCAAATAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543096.5
ENST00000543111.5
CDS CCA 72 bp AGGGAGGGGCCTGTGGTGCCGGGAACTGCGCAGAAGTaGATTGACCTCCGTATACCAGGGTCTGTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: REGPVVPGTAQK*IDLRIPGSVQR
Trigger: CCTCTGGACAGACCCTGGTATACGGAGGTCAATCCACTTCTGCGCAGTTCCCGGCACCACAGGCCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 90 bp AGGGGAGGGAGGGGCCTGTGGTGCCGGGAACTGCGCAGAAGTGGATaGACCTCCGTATACCAGGGTCTGTCCAGAGGAACGAAGAGTCTG +
Preference number: 6 (lower is better)
Translates to: RGGRGLWCRELRRSG*TSVYQGLSRGTKSL
Trigger: CAGACTCTTCGTTCCTCTGGACAGACCCTGGTATACGGAGGTCAATCCACTTCTGCGCAGTTCCCGGCACCACAGGCCCCTCCCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS TCA 72 bp GGGGCCTGTGGTGCCGGGAACTGCGCAGAAGTGGATTaGCCTCCGTATACCAGGGTCTGTCCAGAGGAACGA +
Preference number: 6 (lower is better)
Translates to: GACGAGNCAEVD*PPYTRVCPEER
Trigger: TCGTTCCTCTGGACAGACCCTGGTATACGGAGGTCAATCCACTTCTGCGCAGTTCCCGGCACCACAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp AGAAGTGGGTGGAACTCCAGCTATAAAGGGCTGCCCTaGAGTGGGAGGGGCCCGAGATATTGGGAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: RSGWNSSYKGLP*SGRGPRYWELP
Trigger: GGGCAGCTCCCAATATCTCGGGCCCCTCCCACTCCAGGGCAGCCCTTTATAGCTGGAGTTCCACCCACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp AGGGGCCTGTGGTGCCGGGAACTGCGCAGAAGTGGATaGACCTCCGTATACCAGGGTCTGTCCAGAGGAACG +
Preference number: 6 (lower is better)
Translates to: RGLWCRELRRSG*TSVYQGLSRGT
Trigger: CGTTCCTCTGGACAGACCCTGGTATACGGAGGTCAATCCACTTCTGCGCAGTTCCCGGCACCACAGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 72 bp TGTCCAGAAGTGGGTGGAACTCCAGCTATAAAGGGCTaGCCTGGAGTGGGAGGGGCCCGAGATATTGGGAGC +
Preference number: 6 (lower is better)
Translates to: CPEVGGTPAIKG*PGVGGARDIGS
Trigger: GCTCCCAATATCTCGGGCCCCTCCCACTCCAGGGCAGCCCTTTATAGCTGGAGTTCCACCCACTTCTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp AGGAGCCCAGAGACTTGGAATCTGTCCAGAAGTGGGTaGAACTCCAGCTATAAAGGGCTGCCCTGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: RSPETWNLSRSG*NSSYKGLPWSG
Trigger: CCCACTCCAGGGCAGCCCTTTATAGCTGGAGTTCCACCCACTTCTGGACAGATTCCAAGTCTCTGGGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 72 bp TACCAGGGTCTGTCCAGAGGAACGAAGAGTCTGTGGTaGCCCAAGCTTCCCAGGCTCAGAAAGAATCCCCAT +
Preference number: 6 (lower is better)
Translates to: YQGLSRGTKSLW*PKLPRLRKNPH
Trigger: ATGGGGATTCTTTCTGAGCCTGGGAAGCTTGGGGCACCACAGACTCTTCGTTCCTCTGGACAGACCCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp GTATACCAGGGTCTGTCCAGAGGAACGAAGAGTCTGTaGTGCCCCAAGCTTCCCAGGCTCAGAAAGAATCCC +
Preference number: 6 (lower is better)
Translates to: VYQGLSRGTKSL*CPKLPRLRKNP
Trigger: GGGATTCTTTCTGAGCCTGGGAAGCTTGGGGCACCACAGACTCTTCGTTCCTCTGGACAGACCCTGGTATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp GGAGATTGCTCAGCAGTGGCAGGAGGCTGGAATTCCTaGAGCTGCTCAGAGAAGGTTAAGGGTCCAGATTCC +
Preference number: 6 (lower is better)
Translates to: GDCSAVAGGWNS*SCSEKVKGPDS
Trigger: GGAATCTGGACCCTTAACCTTCTCTGAGCAGCTCCAGGAATTCCAGCCTCCTGCCACTGCTGAGCAATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp CTTCGATTTCTGAAATGGTCTATGGGACCACTGGACTaGCTTAAGGGTGAGGGGCGATCCCAAGGTATGGGC +
Preference number: 6 (lower is better)
Translates to: LRFLKWSMGPLD*LKGEGRSQGMG
Trigger: GCCCATACCTTGGGATCGCCCCTCACCCTTAAGCAAGTCCAGTGGTCCCATAGACCATTTCAGAAATCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 72 bp TGTTCTAAGTTCATAGGGGACTCCAAAGCGTGGGTTTaGTCAGAGGTAAGAGTGACAGCTGACACCCAGGCA +
Preference number: 6 (lower is better)
Translates to: CSKFIGDSKAWV*SEVRVTADTQA
Trigger: TGCCTGGGTGTCAGCTGTCACTCTTACCTCTGAGCAAACCCACGCTTTGGAGTCCCCTATGAACTTAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 72 bp AGACCTGCATCACCTTTTTCCCGTAGTCATCAAGTCTaGTCAGCATCATGTGGAGGTTCCTGGCCTCATAGC +
Preference number: 6 (lower is better)
Translates to: RPASPFSRSHQV*SASCGGSWPHS
Trigger: GCTATGAGGCCAGGAACCTCCACATGATGCTGAGCAGACTTGATGACTACGGGAAAAAGGTGATGCAGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327337.6
ENST00000539751.1
ENST00000543096.5
ENST00000543111.5
CDS CCA 72 bp TGGACTTGCTTAAGGGTGAGGGGCGATCCCAAGGTATaGGCTTTATCTAAGGTGAGAGGAACCCCTAACTTC +
Preference number: 6 (lower is better)
Translates to: WTCLRVRGDPKV*ALSKVRGTPNF
Trigger: GAAGTTAGGGGTTCCTCTCACCTTAGATAAAGCCCATACCTTGGGATCGCCCCTCACCCTTAAGCAAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp TTGCCCAGTGGGGAGAGAAGCCTTCGATTTCTGAAATaGTCTATGGGACCACTGGACTTGCTTAAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: LPSGERSLRFLK*SMGPLDLLKGE
Trigger: CTCACCCTTAAGCAAGTCCAGTGGTCCCATAGACCATTTCAGAAATCGAAGGCTTCTCTCCCCACTGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp AGTCATCAAGTCTGCTCAGCATCATGTGGAGGTTCCTaGCCTCATAGCCTTTCCCAGTATTTTGGATGGCTT +
Preference number: 6 (lower is better)
Translates to: SHQVCSASCGGS*PHSLSQYFGWL
Trigger: AAGCCATCCAAAATACTGGGAAAGGCTATGAGGCCAGGAACCTCCACATGATGCTGAGCAGACTTGATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327337.6
ENST00000539751.1
ENST00000543096.5
ENST00000543111.5
CDS CAA 90 bp ATACTGAGTGGCTCCACTAGGCTTCTAATTTCACCTTTGCCCTCTTaGTCCAATGACTCAGTGGTGGGTTCCACTTTAATCTCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: ILSGSTRLLISPLPS*SNDSVVGSTLISAA
Trigger: TGCAGCAGAGATTAAAGTGGAACCCACCACTGAGTCATTGGACAAAGAGGGCAAAGGTGAAATTAGAAGCCTAGTGGAGCCACTCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS TCA 72 bp CTGTGCGCGCTCAATCCTAGAGATGATATCCTTTACTaGGAATGGGATCTCAAGGTTAGGGAGCATCAAAGG +
Preference number: 6 (lower is better)
Translates to: LCALNPRDDILY*EWDLKVREHQR
Trigger: CCTTTGATGCTCCCTAACCTTGAGATCCCATTCTCAGTAAAGGATATCATCTCTAGGATTGAGCGCGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp GGCTCCACTAGGCTTCTAATTTCACCTTTGCCCTCTTaGTCCAATGACTCAGTGGTGGGTTCCACTTTAATC +
Preference number: 6 (lower is better)
Translates to: GSTRLLISPLPS*SNDSVVGSTLI
Trigger: GATTAAAGTGGAACCCACCACTGAGTCATTGGACAAAGAGGGCAAAGGTGAAATTAGAAGCCTAGTGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp CTGGGTTTCTTCGGAAGTGTCAGAGACCTCCGACATTaGGAACTTCTTAGTGGTGAAAGGAACTTGAGCTAC +
Preference number: 6 (lower is better)
Translates to: LGFFGSVRDLRH*ELLSGERNLSY
Trigger: GTAGCTCAAGTTCCTTTCACCACTAAGAAGTTCCAAATGTCGGAGGTCTCTGACACTTCCGAAGAAACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 90 bp GACTCAGTGGTGGGTTCCACTTTAATCTCTGCTGCAGTTGGACGTTaGTCAAATGGAGATTCACGTTTGACCTTCCTAAATTGCTCCAAC +
Preference number: 6 (lower is better)
Translates to: DSVVGSTLISAAVGR*SNGDSRLTFLNCSN
Trigger: GTTGGAGCAATTTAGGAAGGTCAAACGTGAATCTCCATTTGACAAACGTCCAACTGCAGCAGAGATTAAAGTGGAACCCACCACTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS TCA 72 bp AAGGTGAGAGGAACCCCTAACTTCAATAACTGTTCTTaGGCCTGTTCTAAGTTCATAGGGGACTCCAAAGCG +
Preference number: 6 (lower is better)
Translates to: KVRGTPNFNNCS*ACSKFIGDSKA
Trigger: CGCTTTGGAGTCCCCTATGAACTTAGAACAGGCTCAAGAACAGTTATTGAAGTTAGGGGTTCCTCTCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp GTGTCCGGTAACAACTCCATTTGTGCTATCCAGTGGTaGTGTTCATCAACATCCATTAGAGTCATCTCAGAC +
Preference number: 6 (lower is better)
Translates to: VSGNNSICAIQW*CSSTSIRVISD
Trigger: GTCTGAGATGACTCTAATGGATGTTGATGAACACCACCACTGGATAGCACAAATGGAGTTGTTACCGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 90 bp TCGAAGTATCTGGGTTTCTTCGGAAGTGTCAGAGACCTCCGACATTaGGAACTTCTTAGTGGTGAAAGGAACTTGAGCTACCTTGAAATC +
Preference number: 6 (lower is better)
Translates to: SKYLGFFGSVRDLRH*ELLSGERNLSYLEI
Trigger: GATTTCAAGGTAGCTCAAGTTCCTTTCACCACTAAGAAGTTCCAAATGTCGGAGGTCTCTGACACTTCCGAAGAAACCCAGATACTTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 90 bp TGGCTTCATGAGAGTGAGAAGGGCCCTTTCATCAGTGTAAGGGGTTaGGTATACTGGTGTCCTATATTTGGTGAAATGGGACTGAAATGT +
Preference number: 6 (lower is better)
Translates to: WLHESEKGPFISVRG*VYWCPIFGEMGLKC
Trigger: ACATTTCAGTCCCATTTCACCAAATATAGGACACCAGTATACCAAACCCCTTACACTGATGAAAGGGCCCTTCTCACTCTCATGAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327337.6
ENST00000543096.5
ENST00000543111.5
CDS CAA 90 bp ACTTTGGGTTTCTTGGTATCTGAAACTGAACTCAGTATCCAGGGCTaGTCTATAGGAGGGAATCGGGATTTCTGGTACCATTCCAAAGGT +
Preference number: 6 (lower is better)
Translates to: TLGFLVSETELSIQG*SIGGNRDFWYHSKG
Trigger: ACCTTTGGAATGGTACCAGAAATCCCGATTCCCTCCTATAGACAAGCCCTGGATACTGAGTTCAGTTTCAGATACCAAGAAACCCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327337.6
ENST00000543096.5
ENST00000543111.5
CDS TCA 72 bp TCCGACATTTGGAACTTCTTAGTGGTGAAAGGAACTTaGGCTACCTTGAAATCTGGAGCACTAGGATGGATC +
Preference number: 6 (lower is better)
Translates to: SDIWNFLVVKGT*ATLKSGALGWI
Trigger: GATCCATCCTAGTGCTCCAGATTTCAAGGTAGCTCAAGTTCCTTTCACCACTAAGAAGTTCCAAATGTCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp AACGTGTCCGGTAACAACTCCATTTGTGCTATCCAGTaGTGGTGTTCATCAACATCCATTAGAGTCATCTCA +
Preference number: 6 (lower is better)
Translates to: NVSGNNSICAIQ*WCSSTSIRVIS
Trigger: TGAGATGACTCTAATGGATGTTGATGAACACCACCACTGGATAGCACAAATGGAGTTGTTACCGGACACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp CTCAAGGTTAGGGAGCATCAAAGGACTAAGGATATTTaGGGGCTCTCTTCTCATGATGGTGGAATCCTTGAT +
Preference number: 6 (lower is better)
Translates to: LKVREHQRTKDI*GLSSHDGGILD
Trigger: ATCAAGGATTCCACCATCATGAGAAGAGAGCCCCAAAATATCCTTAGTCCTTTGATGCTCCCTAACCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp CTCCGACATTTGGAACTTCTTAGTGGTGAAAGGAACTaGAGCTACCTTGAAATCTGGAGCACTAGGATGGAT +
Preference number: 6 (lower is better)
Translates to: LRHLELLSGERN*SYLEIWSTRMD
Trigger: ATCCATCCTAGTGCTCCAGATTTCAAGGTAGCTCAAGTTCCTTTCACCACTAAGAAGTTCCAAATGTCGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp TTCTTGGTATCTGAAACTGAACTCAGTATCCAGGGCTaGTCTATAGGAGGGAATCGGGATTTCTGGTACCAT +
Preference number: 6 (lower is better)
Translates to: FLVSETELSIQG*SIGGNRDFWYH
Trigger: ATGGTACCAGAAATCCCGATTCCCTCCTATAGACAAGCCCTGGATACTGAGTTCAGTTTCAGATACCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327337.6
ENST00000543096.5
ENST00000543111.5
CDS CAA 90 bp GAATGGGATCTCAAGGTTAGGGAGCATCAAAGGACTAAGGATATTTaGGGGCTCTCTTCTCATGATGGTGGAATCCTTGATGCATTTTTC +
Preference number: 6 (lower is better)
Translates to: EWDLKVREHQRTKDI*GLSSHDGGILDAFF
Trigger: GAAAAATGCATCAAGGATTCCACCATCATGAGAAGAGAGCCCCAAAATATCCTTAGTCCTTTGATGCTCCCTAACCTTGAGATCCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS TCA 72 bp AAATATTGTCCATATTGTCCTCAGTATCACCAACTTTaGTTATCGCCCTGGATGACTGTGGAGAAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: KYCPYCPQYHQL*LSPWMTVEKVQ
Trigger: CTGGACCTTCTCCACAGTCATCCAGGGCGATAATCAAAGTTGGTGATACTGAGGACAATATGGACAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 72 bp GAGATCTCGTATTATCTTCAGAGAGAGCTCCTTTTCTaGTTCACTTGTCTCATGTGCATACACAGTGGAACT +
Preference number: 6 (lower is better)
Translates to: EISYYLQRELLF*FTCLMCIHSGT
Trigger: AGTTCCACTGTGTATGCACATGAGACAAGTGAAGCAGAAAAGGAGCTCTCTCTGAAGATAATACGAGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp AAGGGCCCTTTCATCAGTGTAAGGGGTTTGGTATACTaGTGTCCTATATTTGGTGAAATGGGACTGAAATGT +
Preference number: 6 (lower is better)
Translates to: KGPFISVRGLVY*CPIFGEMGLKC
Trigger: ACATTTCAGTCCCATTTCACCAAATATAGGACACCAGTATACCAAACCCCTTACACTGATGAAAGGGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327337.6
ENST00000543096.5
ENST00000543111.5
CDS CAA 90 bp TCCTTGTCTAAAATATTGTCCATATTGTCCTCAGTATCACCAACTTaGATTATCGCCCTGGATGACTGTGGAGAAGGTCCAGGTAACACT +
Preference number: 6 (lower is better)
Translates to: SLSKILSILSSVSPT*IIALDDCGEGPGNT
Trigger: AGTGTTACCTGGACCTTCTCCACAGTCATCCAGGGCGATAATCAAAGTTGGTGATACTGAGGACAATATGGACAATATTTTAGACAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 72 bp GTGCTGTCTTCGGAAATATCTTCAGAAGCAACAGGTTaGTGTCGTAGTTCAGTTAAATCTGGAGTTCTTTCA +
Preference number: 6 (lower is better)
Translates to: VLSSEISSEATG*CRSSVKSGVLS
Trigger: TGAAAGAACTCCAGATTTAACTGAACTACGACAGCAACCTGTTGCTTCTGAAGATATTTCCGAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp CTAAATGATTCTATAGCAAAAGTGTCTCGAAGTATCTaGGTTTCTTCGGAAGTGTCAGAGACCTCCGACATT +
Preference number: 6 (lower is better)
Translates to: LNDSIAKVSRSI*VSSEVSETSDI
Trigger: AATGTCGGAGGTCTCTGACACTTCCGAAGAAACCCAGATACTTCGAGACACTTTTGCTATAGAATCATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327337.6
ENST00000543096.5
ENST00000543111.5
CDS CAA 72 bp GTATTATCTTCAGAGAGAGCTCCTTTTCTGCTTCACTaGTCTCATGTGCATACACAGTGGAACTTTGGAAGT +
Preference number: 6 (lower is better)
Translates to: VLSSERAPFLLH*SHVHTQWNFGS
Trigger: ACTTCCAAAGTTCCACTGTGTATGCACATGAGACAAGTGAAGCAGAAAAGGAGCTCTCTCTGAAGATAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp AAAATATTGTCCATATTGTCCTCAGTATCACCAACTTaGATTATCGCCCTGGATGACTGTGGAGAAGGTCCA +
Preference number: 6 (lower is better)
Translates to: KILSILSSVSPT*IIALDDCGEGP
Trigger: TGGACCTTCTCCACAGTCATCCAGGGCGATAATCAAAGTTGGTGATACTGAGGACAATATGGACAATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp GCTGCAGTTGGACGTTTGTCAAATGGAGATTCACGTTaGACCTTCCTAAATTGCTCCAACATCATCATACTT +
Preference number: 6 (lower is better)
Translates to: AAVGRLSNGDSR*TFLNCSNIIIL
Trigger: AAGTATGATGATGTTGGAGCAATTTAGGAAGGTCAAACGTGAATCTCCATTTGACAAACGTCCAACTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 90 bp TTAATCTCTGCTGCAGTTGGACGTTTGTCAAATGGAGATTCACGTTaGACCTTCCTAAATTGCTCCAACATCATCATACTTGTTCCACTT +
Preference number: 6 (lower is better)
Translates to: LISAAVGRLSNGDSR*TFLNCSNIIILVPL
Trigger: AAGTGGAACAAGTATGATGATGTTGGAGCAATTTAGGAAGGTCAAACGTGAATCTCCATTTGACAAACGTCCAACTGCAGCAGAGATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CCA 72 bp ATTTTTCCTTTCTGTGGCTCAGCAGTATCATCAAATTaGATCATACTGAGTGGCTCCACTAGGCTTCTAATT +
Preference number: 6 (lower is better)
Translates to: IFPFCGSAVSSN*IILSGSTRLLI
Trigger: AATTAGAAGCCTAGTGGAGCCACTCAGTATGATCCAATTTGATGATACTGCTGAGCCACAGAAAGGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS GCA 72 bp TTGTCAAATGGAGATTCACGTTTGACCTTCCTAAATTaGTCCAACATCATCATACTTGTTCCACTTTTGCCA +
Preference number: 6 (lower is better)
Translates to: LSNGDSRLTFLN*SNIIILVPLLP
Trigger: TGGCAAAAGTGGAACAAGTATGATGATGTTGGAGCAATTTAGGAAGGTCAAACGTGAATCTCCATTTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp TCGTCGAGGAAAGATGTACTAAATCTGCTTAGTATCTaGACATTGTTCTCAATAGCTTTTAACGTGTCCGGT +
Preference number: 6 (lower is better)
Translates to: SSRKDVLNLLSI*TLFSIAFNVSG
Trigger: ACCGGACACGTTAAAAGCTATTGAGAACAATGTCAAGATACTAAGCAGATTTAGTACATCTTTCCTCGACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp CTAAATTGCTCCAACATCATCATACTTGTTCCACTTTaGCCACCTTGGCTCTTTGTTTCAGTTAAAGAGAGA +
Preference number: 6 (lower is better)
Translates to: LNCSNIIILVPL*PPWLFVSVKER
Trigger: TCTCTCTTTAACTGAAACAAAGAGCCAAGGTGGCAAAAGTGGAACAAGTATGATGATGTTGGAGCAATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 90 bp TTCTTCTTTTCGTCGAGGAAAGATGTACTAAATCTGCTTAGTATCTaGACATTGTTCTCAATAGCTTTTAACGTGTCCGGTAACAACTCC +
Preference number: 6 (lower is better)
Translates to: FFFSSRKDVLNLLSI*TLFSIAFNVSGNNS
Trigger: GGAGTTGTTACCGGACACGTTAAAAGCTATTGAGAACAATGTCAAGATACTAAGCAGATTTAGTACATCTTTCCTCGACGAAAAGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 90 bp TTGACCTTCCTAAATTGCTCCAACATCATCATACTTGTTCCACTTTaGCCACCTTGGCTCTTTGTTTCAGTTAAAGAGAGATGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: LTFLNCSNIIILVPL*PPWLFVSVKERCFL
Trigger: AAGAAAACATCTCTCTTTAACTGAAACAAAGAGCCAAGGTGGCAAAAGTGGAACAAGTATGATGATGTTGGAGCAATTTAGGAAGGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS TCA 72 bp CTTGAAGTTTCTGCTGAAGCATTTCATTTTCGTTACTaGGATCTCGTATTATCTTCAGAGAGAGCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: LEVSAEAFHFRY*DLVLSSERAPF
Trigger: AAAAGGAGCTCTCTCTGAAGATAATACGAGATCTCAGTAACGAAAATGAAATGCTTCAGCAGAAACTTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 90 bp TTTTCGTCGAGGAAAGATGTACTAAATCTGCTTAGTATCTTGACATaGTTCTCAATAGCTTTTAACGTGTCCGGTAACAACTCCATTTGT +
Preference number: 6 (lower is better)
Translates to: FSSRKDVLNLLSILT*FSIAFNVSGNNSIC
Trigger: ACAAATGGAGTTGTTACCGGACACGTTAAAAGCTATTGAGAACAATGTCAAGATACTAAGCAGATTTAGTACATCTTTCCTCGACGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 90 bp TCATCTACAATATTTTCAAGTTCCTTGTCTAAAATATTGTCCATATaGTCCTCAGTATCACCAACTTTGATTATCGCCCTGGATGACTGT +
Preference number: 6 (lower is better)
Translates to: SSTIFSSSLSKILSI*SSVSPTLIIALDDC
Trigger: ACAGTCATCCAGGGCGATAATCAAAGTTGGTGATACTGAGGACAATATGGACAATATTTTAGACAAGGAACTTGAAAATATTGTAGATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS TCA 72 bp AGTCTCATCTTCCTGATAGAAATCACCTTTCTTCAATaGTACGTTATCTTTAGTGCTGTCTTCGGAAATATC +
Preference number: 6 (lower is better)
Translates to: SLIFLIEITFLQ*YVIFSAVFGNI
Trigger: GATATTTCCGAAGACAGCACTAAAGATAACGTATCATTGAAGAAAGGTGATTTCTATCAGGAAGATGAGACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5
CDS CAA 72 bp AGGAAAGATGTACTAAATCTGCTTAGTATCTTGACATaGTTCTCAATAGCTTTTAACGTGTCCGGTAACAAC +
Preference number: 6 (lower is better)
Translates to: RKDVLNLLSILT*FSIAFNVSGNN
Trigger: GTTGTTACCGGACACGTTAAAAGCTATTGAGAACAATGTCAAGATACTAAGCAGATTTAGTACATCTTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327337.6
ENST00000543111.5