RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM181B (Homo sapiens)

Ensembl gene IDs: ENSG00000182103

Ensembl transcript IDs: ENST00000329203.5

Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGCATCATCAGAAGGCAGCCTCTCACTCAGATGTTCTGGGCGTTaGTCTCTTCATGCCTTTCTCCCCGCAGTTCTACAGCACCAAGGG +
Preference number: 1 (lower is better)
Translates to: AASSEGSLSLRCSGR*SLHAFLPAVLQHQG
Trigger: CCCTTGGTGCTGTAGAACTGCGGGGAGAAAGGCATGAAGAGAGCAACGCCCAGAACATCTGAGTGAGAGGCTGCCTTCTGATGATGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR GCA 90 bp TTTTCAACTAACTCACATCCAGATATTCCTGCAATCAATCCTGGGTaGCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATCATCAGAAGGC +
Preference number: 1 (lower is better)
Translates to: FSTNSHPDIPAINPG*LEAKQLSFAASSEG
Trigger: GCCTTCTGATGATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAATATCTGGATGTGAGTTAGTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR TCA 90 bp ACACTGTTTAGAAGGGGTAATTACACTAAATACACTGACCTTCGCTaGAAAATAGAAGGGACAGGTGGCTACAGAAGCCAGCTCTTACCC +
Preference number: 1 (lower is better)
Translates to: TLFRRGNYTKYTDLR*KIEGTGGYRSQLLP
Trigger: GGGTAAGAGCTGGCTTCTGTAGCCACCTGTCCCTTCTATTTTTCAGCGAAGGTCAGTGTATTTAGTGTAATTACCCCTTCTAAACAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR GCA 90 bp GTAAGTCTCACCTCCATTCTTTTCAATATAGGCTTTAATTCAAAATaGACTCAAGGAGAGGGAAGGGAGGGACTAGGACACTGTTTAGAA +
Preference number: 1 (lower is better)
Translates to: VSLTSILFNIGFNSK*TQGEGREGLGHCLE
Trigger: TTCTAAACAGTGTCCTAGTCCCTCCCTTCCCTCTCCTTGAGTGCATTTTGAATTAAAGCCTATATTGAAAAGAATGGAGGTGAGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR GCA 90 bp TGTGTAGAAACCATTTATATATACACAGCAGAACCAATCAAGCACTaGCACAGCCTCAAGACATTTTACTTATTTCCCTCTGAGCTACCC +
Preference number: 1 (lower is better)
Translates to: CVETIYIYTAEPIKH*HSLKTFYLFPSELP
Trigger: GGGTAGCTCAGAGGGAAATAAGTAAAATGTCTTGAGGCTGTGGCAGTGCTTGATTGGTTCTGCTGTGTATATATAAATGGTTTCTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR CAA 90 bp TGCAGCATCATCAGAAGGCAGCCTCTCACTCAGATGTTCTGGGCGTaGCTCTCTTCATGCCTTTCTCCCCGCAGTTCTACAGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: CSIIRRQPLTQMFWA*LSSCLSPRSSTAPR
Trigger: CCTTGGTGCTGTAGAACTGCGGGGAGAAAGGCATGAAGAGAGCAACGCCCAGAACATCTGAGTGAGAGGCTGCCTTCTGATGATGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR CAA 90 bp TTCCTGCAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTaGCAGCATCATCAGAAGGCAGCCTCTCACTCAGATGTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: FLQSILGALKPSSSP*QHHQKAASHSDVLG
Trigger: GCCCAGAACATCTGAGTGAGAGGCTGCCTTCTGATGATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR TCA 90 bp CTTACAATCATGGCAGAAGGTGAAGCAGCAGGAAGGCACGTCTTACATGGTGGCTGTGGGTATAAGGACTaGGGAAACAAAGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LTIMAEGEAAGRHVLHGGCGYKD*GNKGRQ
Trigger: CTGCCTCCCTTTGTTTCCTCAGTCCTTATACCCACA...GCCACCATGTAAGACGTGCCTTCCTGCTGCTTCACCTTCTGCCATGATTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR GCA 90 bp CTTACAATCATGGCAGAAGGTGAAGCAGCAGGAAGGCACGTCTTACATGGTGGCCAAGCAGCTCTCCTTTaGAGCATCATCAGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: LTIMAEGEAAGRHVLHGGQAALL*SIIRRQ
Trigger: CTGCCTTCTGATGATGCTGCAAAGGAGAGCTGCTTG...GCCACCATGTAAGACGTGCCTTCCTGCTGCTTCACCTTCTGCCATGATTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CCA 90 bp CTTACAATCATGGCAGAAGGTGAAGCAGCAGGAAGGCACGTCTTACATGGTGGCCTTTATGCCCTTCCGTaGGGAGAGTGTGGGTATAAG +
Preference number: 2 (lower is better)
Translates to: LTIMAEGEAAGRHVLHGGLYALP*GECGYK
Trigger: CTTATACCCACACTCTCCCCACGGAAGGGCATAAAG...GCCACCATGTAAGACGTGCCTTCCTGCTGCTTCACCTTCTGCCATGATTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR CAA 90 bp CAACTAACTCACATCCAGATATTCCTGCAATCAATCCTGGGTGCCTaGAAGCCAAGCAGCTCTCCTTTGCAGCATCATCAGAAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: QLTHIQIFLQSILGA*KPSSSPLQHHQKAA
Trigger: GGCTGCCTTCTGATGATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAATATCTGGATGTGAGTTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CCA 90 bp TTCCTGCAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATAATAGAAGGGACAGGTaGCTACAGAAGCCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: FLQSILGALKPSSSPLQHNRRDR*LQKPAL
Trigger: AAGAGCTGGCTTCTGTAGCCACCTGTCCCTTCTATT...ATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR TCA 90 bp TTCCTGCAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATAAAAGAGTTAAACCGTaGCAGAAGAGAACCCTACCC +
Preference number: 2 (lower is better)
Translates to: FLQSILGALKPSSSPLQHKRVKP*QKRTLP
Trigger: GGGTAGGGTTCTCTTCTGTCACGGTTTAACTCTTTT...ATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR GCA 90 bp TTCCTGCAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATCCTACAAAAGAGATGTaGAAGAAAAGCCGGCCGAAA +
Preference number: 2 (lower is better)
Translates to: FLQSILGALKPSSSPLQHPTKEM*KKSRPK
Trigger: TTTCGGCCGGCTTTTCTTGCACATCTCTTTTGTAGG...ATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR GCA 90 bp ATTCCTTTGGAAACTTCACACCTTTCTTTATGCCCTTCCGTGGGGAGAGTGTGGAAAGAGGTTACAGTTTaGCCACCCTCTCCCTCCCAA +
Preference number: 2 (lower is better)
Translates to: IPLETSHLSLCPSVGRVWKEVTV*PPSPSQ
Trigger: TTGGGAGGGAGAGGGTGGGCAAACTGTAACCTCTTT...CCACACTCTCCCCACGGAAGGGCATAAAGAAAGGTGTGAAGTTTCCAAAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR TCA 90 bp TTCCTGCAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATCAACCAGTTGTGAAGTaGGTAGAAGAACATTACCGT +
Preference number: 2 (lower is better)
Translates to: FLQSILGALKPSSSPLQHQPVVK*VEEHYR
Trigger: ACGGTAATGTTCTTCTACTCACTTCACAACTGGTTG...ATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR GCA 90 bp ATCCAATCACCTTCCACTAGGACCTCCCTCGACATGTGGGGATTACAATTAGAGGGTTTCATCTCCACGTaGATTTTCCCATCGTTCTTC +
Preference number: 2 (lower is better)
Translates to: IQSPSTRTSLDMWGLQLEGFIST*IFPSFF
Trigger: GAAGAACGATGGGAAAATGCACGTGGAGATGAAACC...CTCTAATTGTAATCCCCACATGTCGAGGGAGGTCCTAGTGGAAGGTGATTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CCA 90 bp ATTCCTTTGGAAACTTCACACCTTTCTTTATGCCCTTCCGTGGGGAGAGTGTGGTACCCCAAACCATCTTaGTTTCTTGACTCCTCTGGT +
Preference number: 2 (lower is better)
Translates to: IPLETSHLSLCPSVGRVWYPKPS*FLDSSG
Trigger: ACCAGAGGAGTCAAGAAACCAAGATGGTTTGGGGTA...CCACACTCTCCCCACGGAAGGGCATAAAGAAAGGTGTGAAGTTTCCAAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CCA 90 bp GGAGAGAGAGATAGCAAGGAAGTGCCACACTTTATAACCATCAGATCTCATGAGCTCACTCAGATGTTCTaGGCGTTGCTCTCTTCATGC +
Preference number: 2 (lower is better)
Translates to: GERDSKEVPHFITIRSHELTQMF*ALLSSC
Trigger: GCATGAAGAGAGCAACGCCCAGAACATCTGAGTGAG...CTCATGAGATCTGATGGTTATAAAGTGTGGCACTTCCTTGCTATCTCTCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR CAA 90 bp CAGATTCCATTCATCAGACCTGCTATTCAGGGAACAGAAATTCCTTaGGAAACTTCACACCTTTCTTTATGCCCTTCCGTGGGGAGAGTG +
Preference number: 2 (lower is better)
Translates to: QIPFIRPAIQGTEIP*ETSHLSLCPSVGRV
Trigger: CACTCTCCCCACGGAAGGGCATAAAGAAAGGTGTGAAGTTTCCAAAGGAATTTCTGTTCCCTGAATAGCAGGTCTGATGAATGGAATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR GCA 90 bp CCCTCACTATCACAAGAACAGCATGGAGGAAACCACCCCCATGATCCAATCACCAATGTTTTCCTACTGTaGAAGTGTATCCTGGATTGT +
Preference number: 2 (lower is better)
Translates to: PSLSQEQHGGNHPHDPITNVFLL*KCILDC
Trigger: ACAATCCAGGATACACTTGCACAGTAGGAAAACATT...GGTGATTGGATCATGGGGGTGGTTTCCTCCATGCTGTTCTTGTGATAGTGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR GCA 90 bp GCTAAGCGACCAGACGGAAAACCGTCCTGTAAGAAAACACCCAAATCAGTAAGTGGCTTTAATTCAAAATaGACTCAAGGAGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: AKRPDGKPSCKKTPKSVSGFNSK*TQGEGR
Trigger: CCTTCCCTCTCCTTGAGTGCATTTTGAATTAAAGCC...ACTTACTGATTTGGGTGTTTTCTTACAGGACGGTTTTCCGTCTGGTCGCTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR GCA 90 bp ATCCAATCACCTTCCACTAGGACCTCCCTCGACATGTGGGGATTACAATTAGAGGATTTTTACACCTCTTaGGGTAACACTCGGTTTTCA +
Preference number: 2 (lower is better)
Translates to: IQSPSTRTSLDMWGLQLEDFYTS*GNTRFS
Trigger: TGAAAACCGAGTGTTACCGCAAGAGGTGTAAAAATC...CTCTAATTGTAATCCCCACATGTCGAGGGAGGTCCTAGTGGAAGGTGATTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CCA 90 bp CTTACAATCATGGCAGAAGGTGAAGCAGCAGGAAGGCACGTCTTACATGGTGGCGAACAGAAATTCCTTTaGAAACTTCACACCTTTCTT +
Preference number: 2 (lower is better)
Translates to: LTIMAEGEAAGRHVLHGGEQKFL*KLHTFL
Trigger: AAGAAAGGTGTGAAGTTTCCAAAGGAATTTCTGTTC...GCCACCATGTAAGACGTGCCTTCCTGCTGCTTCACCTTCTGCCATGATTGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CCA 90 bp ATCCAATCACCTTCCACTAGGACCTCCCTCGACATGTGGGGATTACAATTAGAGTCGTTCTATTTCCTGTaGTGCTTTCTTAAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: IQSPSTRTSLDMWGLQLESFYFL*CFLKKG
Trigger: GCCTTTCTTAAGAAAGCACCACAGGAAATAGAACGA...CTCTAATTGTAATCCCCACATGTCGAGGGAGGTCCTAGTGGAAGGTGATTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR TCA 90 bp TTTACACCTCTTGCGGTAACACTCGGTTTTCAACTAACTCACATCCAGATATTCACCATCTTGGTTTCTTaGCTCCTCTGGTCCAGTAAG +
Preference number: 2 (lower is better)
Translates to: FTPLAVTLGFQLTHIQIFTILVS*LLWSSK
Trigger: CTTACTGGACCAGAGGAGTCAAGAAACCAAGATGGT...GAATATCTGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR TCA 90 bp TTTCCGTGTGTAGAAACCATTTATATATACACAGCAGAACCAATCAAGCACTGCTACACTGACCTTCGCTaGAAAATAGAAGGGACAGGT +
Preference number: 2 (lower is better)
Translates to: FPCVETIYIYTAEPIKHCYTDLR*KIEGTG
Trigger: ACCTGTCCCTTCTATTTTTCAGCGAAGGTCAGTGTA...GCAGTGCTTGATTGGTTCTGCTGTGTATATATAAATGGTTTCTACACACGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR GCA 90 bp ATAAATGAAAGAGGTTTAATTGACTCACAGTTCCACATGGCTGGGAGGCCTCATTCCATTCATCAGACCTaGTATTCAGGGAACAGAAAT +
Preference number: 2 (lower is better)
Translates to: INERGLIDSQFHMAGRPHSIHQT*YSGNRN
Trigger: ATTTCTGTTCCCTGAATAGCAGGTCTGATGAATGGA...ATGAGGCCTCCCAGCCATGTGGAACTGTGAGTCAATTAAACCTCTTTCATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CCA 90 bp GATGACATTTGGCTAGGGACACAGATCCAAACAGTATCAAGCACCTACATCATGTGTGCAAGTGTATCCTaGATTGTATTCACAACAGTT +
Preference number: 2 (lower is better)
Translates to: DDIWLGTQIQTVSSTYIMCASVS*IVFTTV
Trigger: AACTGTTGTGAATACAATCCAGGATACACTTGCACA...CATGATGTAGGTGCTTGATACTGTTTGGATCTGTGTCCCTAGCCAAATGTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR TCA 72 bp TATGCCCTTCCGTGGGGAGAGTGTGGGTATAAGGACTaGGGAAACAAAGGGAGGCAGAAACCAACAGAGGTG +
Preference number: 3 (lower is better)
Translates to: YALPWGECGYKD*GNKGRQKPTEV
Trigger: CACCTCTGTTGGTTTCTGCCTCCCTTTGTTTCCTCAGTCCTTATACCCACACTCTCCCCACGGAAGGGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR TCA 72 bp ACATCCAGATATTCCTGCAATCAATCCTGGGTGCCTTaGAGCCAAGCAGCTCTCCTTTGCAGCATCATCAGA +
Preference number: 3 (lower is better)
Translates to: TSRYSCNQSWVP*SQAALLCSIIR
Trigger: TCTGATGATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAATATCTGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR GCA 72 bp AACTCACATCCAGATATTCCTGCAATCAATCCTGGGTaGCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATCA +
Preference number: 3 (lower is better)
Translates to: NSHPDIPAINPG*LEAKQLSFAAS
Trigger: TGATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAATATCTGGATGTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CAA 90 bp GGAGAGAGAGATAGCAAGGAAGTGCCACACTTTATAACCATCAGATCTCATGAGCCAAGCAGCTCTCCTTaGCAGCATCATCAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: GERDSKEVPHFITIRSHEPSSSP*QHHQKA
Trigger: TGCCTTCTGATGATGCTGCAAAGGAGAGCTGCTTGG...CTCATGAGATCTGATGGTTATAAAGTGTGGCACTTCCTTGCTATCTCTCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CAA 90 bp CCCTCACTATCACAAGAACAGCATGGAGGAAACCACCCCCATGATCCAATCACCAAATGGAACCCAGGTTaGCCAAATTTAAGTCTCCTA +
Preference number: 3 (lower is better)
Translates to: PSLSQEQHGGNHPHDPITKWNPG*PNLSLL
Trigger: TAGGAGACTTAAATTTGGCAAACCTGGGTTCCATTT...GGTGATTGGATCATGGGGGTGGTTTCCTCCATGCTGTTCTTGTGATAGTGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CAA 90 bp GATGACATTTGGCTAGGGACACAGATCCAAACAGTATCAAGCACCTACATCATGCCCTTAACCAACCTATaGGTGCCATGTGTCCTCTCT +
Preference number: 3 (lower is better)
Translates to: DDIWLGTQIQTVSSTYIMPLTNL*VPCVLS
Trigger: AGAGAGGACACATGGCACCAATAGGTTGGTTAAGGG...CATGATGTAGGTGCTTGATACTGTTTGGATCTGTGTCCCTAGCCAAATGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR CCA 72 bp CCTCGACATGTGGGGATTACAATTAGAGATGACATTTaGCTAGGGACACAGATCCAAACAGTATCAAGCACC +
Preference number: 3 (lower is better)
Translates to: PRHVGITIRDDI*LGTQIQTVSST
Trigger: GGTGCTTGATACTGTTTGGATCTGTGTCCCTAGCCAAATGTCATCTCTAATTGTAATCCCCACATGTCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR-3UTR CAA 90 bp AGCAAGCAAAACAGTAGGAGAGAGATAACCTGTTTTACTACACTAGGTAAGAAACAAAGAGGTTACAGTTaGCCCACCCTCTCCCTCCCA +
Preference number: 3 (lower is better)
Translates to: SKQNSRREITCFTTLGKKQRGYS*PTLSLP
Trigger: TGGGAGGGAGAGGGTGGGCAAACTGTAACCTCTTTG...TTTCTTACCTAGTGTAGTAAAACAGGTTATCTCTCTCCTACTGTTTTGCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR TCA 72 bp AGAAGGGGTAATTACACTAAATACACTGACCTTCGCTaGAAAATAGAAGGGACAGGTGGCTACAGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: RRGNYTKYTDLR*KIEGTGGYRSQ
Trigger: CTGGCTTCTGTAGCCACCTGTCCCTTCTATTTTTCAGCGAAGGTCAGTGTATTTAGTGTAATTACCCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR TCA 72 bp CAAGGAAGTGCCACACTTTATAACCATCAGATCTCATaGGAACTCCCTCACTATCACAAGAACAGCATGGAG +
Preference number: 3 (lower is better)
Translates to: QGSATLYNHQIS*ELPHYHKNSME
Trigger: CTCCATGCTGTTCTTGTGATAGTGAGGGAGTTCTCATGAGATCTGATGGTTATAAAGTGTGGCACTTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR GCA 72 bp ACCTCCATTCTTTTCAATATAGGCTTTAATTCAAAATaGACTCAAGGAGAGGGAAGGGAGGGACTAGGACAC +
Preference number: 3 (lower is better)
Translates to: TSILFNIGFNSK*TQGEGREGLGH
Trigger: GTGTCCTAGTCCCTCCCTTCCCTCTCCTTGAGTGCATTTTGAATTAAAGCCTATATTGAAAAGAATGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR GCA 72 bp ATGTGTGCAAACATGAACCTGGATTTTTACACCTCTTaGGGTAACACTCGGTTTTCAACTAACTCACATCCA +
Preference number: 3 (lower is better)
Translates to: MCANMNLDFYTS*GNTRFSTNSHP
Trigger: TGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAAAATCCAGGTTCATGTTTGCACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR GCA 72 bp AGTAACAGTCACAGGGTTATTAATGTTTTCCTACTGTaGAAGTGTATCCTGGATTGTATTCACAACAGTTTA +
Preference number: 3 (lower is better)
Translates to: SNSHRVINVFLL*KCILDCIHNSL
Trigger: TAAACTGTTGTGAATACAATCCAGGATACACTTGCACAGTAGGAAAACATTAATAACCCTGTGACTGTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR TCA 90 bp TCAGATTTAGGAGAAACCCACGGAGGCGCGGCGCTCTCCACAGCCGTCTCTAATCCCGGGACGGCTCCGTaGAGAAGGACGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SDLGETHGGAALSTAVSNPGTAP*RRTEAD
Trigger: ATCTGCCTCCGTCCTTCTTCACGGAGCCGTCCCGGG...ATTAGAGACGGCTGTGGAGAGCGCCGCGCCTCCGTGGGTTTCTCCTAAATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TTTTTCCCCAAATCTCCCTCGGACAACAGATCATACTCCTCCCTGCAGAGCCCCGCACCCCCGGGGACGTaGCGCAGCGAGTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FFPKSPSDNRSYSSLQSPAPPGT*RSESKS
Trigger: GCTCTTCGACTCGCTGCGCCACGTCCCCGGGGGTGC...GGGGCTCTGCAGGGAGGAGTATGATCTGTTGTCCGAGGGAGATTTGGGGAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp CAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATCATCAGGCCAGACTTCGGCTTTaGAAGCTGGCGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: QSILGALKPSSSPLQHHQARLRL*KLAAAA
Trigger: CGCCGCGGCCGCCAGCTTGCAAAGCCGAAGTCTGGC...CTGATGATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp TTTTTCCCCAAATCTCCCTCGGACAACAGATCATACTCCTCCCTGCAGAGCCCCGGCTGGAATAGGCGGTaGGGCTGTAGCCCGCGCTGT +
Preference number: 4 (lower is better)
Translates to: FFPKSPSDNRSYSSLQSPGWNRR*GCSPRC
Trigger: ACAGCGCGGGCTACAGCCGCACCGCCTATTCCAGCC...GGGGCTCTGCAGGGAGGAGTATGATCTGTTGTCCGAGGGAGATTTGGGGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp CTTACAATCATGGCAGAAGGTGAAGCAGCAGGAAGGCACGTCTTACATGGTGGCAAGGGCACGAAAGGGTaGGTGCTGAGGAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LTIMAEGEAAGRHVLHGGKGTKG*VLRSAA
Trigger: GGCGGCGCTCCTCAGCACGCACCCTTTCGTGCCCTT...GCCACCATGTAAGACGTGCCTTCCTGCTGCTTCACCTTCTGCCATGATTGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp CCCTCACTATCACAAGAACAGCATGGAGGAAACCACCCCCATGATCCAATCACCAGGACGGAGGCAGATTaGGTGCCCGCAGCGGGACCT +
Preference number: 4 (lower is better)
Translates to: PSLSQEQHGGNHPHDPITRTEAD*VPAAGP
Trigger: AGGTCCCGCTGCGGGCACGCAATCTGCCTCCGTCCT...GGTGATTGGATCATGGGGGTGGTTTCCTCCATGCTGTTCTTGTGATAGTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp GCTAAGCGACCAGACGGAAAACCGTCCTGTAAGAAAACACCCAAATCAGTAAGTGGCGGCAAGCAAGACTaGCGCCTCCGTGCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: AKRPDGKPSCKKTPKSVSGGKQD*RLRAGA
Trigger: GGCGCCGGCACGGAGGCGGCAGTCTTGCTTGCCGCC...ACTTACTGATTTGGGTGTTTTCTTACAGGACGGTTTTCCGTCTGGTCGCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp GGAGAGAGAGATAGCAAGGAAGTGCCACACTTTATAACCATCAGATCTCATGAGAGACTGCCGCCTCCGTaGCGGCGCCGTAGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: GERDSKEVPHFITIRSHERLPPP*RRRSRA
Trigger: GGCCCGACTACGGCGCCGGCACGGAGGCGGCAGTCT...CTCATGAGATCTGATGGTTATAAAGTGTGGCACTTCCTTGCTATCTCTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp GATGACATTTGGCTAGGGACACAGATCCAAACAGTATCAAGCACCTACATCATGGACCTTCCTGGCCCCTaGGATCGCCGTGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: DDIWLGTQIQTVSSTYIMDLPGP*DRRGPR
Trigger: GCGGGGGCCACGGCGATCCCAGGGGCCAGGAAGGTC...CATGATGTAGGTGCTTGATACTGTTTGGATCTGTGTCCCTAGCCAAATGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp ATCCAATCACCTTCCACTAGGACCTCCCTCGACATGTGGGGATTACAATTAGAGCGGAGGCAGATTGCGTaGCCGCAGCGGGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: IQSPSTRTSLDMWGLQLERRQIA*PQRDLP
Trigger: AGGAAGGTCCCGCTGCGGGCACGCAATCTGCCTCCG...CTCTAATTGTAATCCCCACATGTCGAGGGAGGTCCTAGTGGAAGGTGATTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp ATAAATGAAAGAGGTTTAATTGACTCACAGTTCCACATGGCTGGGAGGCCTCATCAGCGGCCGTTTGGCTaGCGTGTCGGCGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: INERGLIDSQFHMAGRPHQRPFG*RVGGAR
Trigger: CCGAGCGCCGCCGACACGCCAGCCAAACGGCCGCTG...ATGAGGCCTCCCAGCCATGTGGAACTGTGAGTCAATTAAACCTCTTTCATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TTCCTGCAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATGGGCAGGGCGCAGTCTaGAAAGAAGGGGGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: FLQSILGALKPSSSPLQHGQGAV*KEGGER
Trigger: TCTTTCGCCCCCTTCTTTCCAGACTGCGCCCTGCCC...ATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp TTTACACCTCTTGCGGTAACACTCGGTTTTCAACTAACTCACATCCAGATATTCACACCCGCCGCCGCCTaGCCGGGACGGCTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: FTPLAVTLGFQLTHIQIFTPAAA*PGRLRE
Trigger: TTCACGGAGCCGTCCCGGGCAGGCGGCGGCGGGTGT...GAATATCTGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TGGATTTTTACACCTCTTGCGGTAACACTCGGTTTTCAACTAACTCACATCCAGGCAGCGGGACCTTCCTaGCCCCTGGGATCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: WIFTPLAVTLGFQLTHIQAAGPS*PLGSPW
Trigger: CCACGGCGATCCCAGGGGCCAGGAAGGTCCCGCTGC...CTGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAAAATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TTCCCATCGTTCTTCAGATTTAGGAGAAACCCACGGAGGCGCGGCGCTCTCCACCTTTATGCCCTTCCGTaGGGAGAGTGTGGGTATAAG +
Preference number: 4 (lower is better)
Translates to: FPSFFRFRRNPRRRGALHLYALP*GECGYK
Trigger: CTTATACCCACACTCTCCCCACGGAAGGGCATAAAG...GTGGAGAGCGCCGCGCCTCCGTGGGTTTCTCCTAAATCTGAAGAACGATGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR CAA 72 bp CACCAGTCTTTCCTCCCCTGCCCCTTAACCAACCTATaGGTGCCATGTGTCCTCTCTGCCACATTCATGGCT +
Preference number: 4 (lower is better)
Translates to: HQSFLPCPLTNL*VPCVLSATFMA
Trigger: AGCCATGAATGTGGCAGAGAGGACACATGGCACCAATAGGTTGGTTAAGGGGCAGGGGAGGAAAGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR TCA 90 bp TTCCTGCAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATCAATCCTGGGTGCCTTaGAGCCAAGCAGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FLQSILGALKPSSSPLQHQSWVP*SQAALL
Trigger: AAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTG...ATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp TTCCTGCAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATGCTTCTGCAGGTACTTaGGGTGGTTCACCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: FLQSILGALKPSSSPLQHASAGT*GGSPSA
Trigger: AGCGGAAGGTGAACCACCGCAAGTACCTGCAGAAGC...ATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TTTACACCTCTTGCGGTAACACTCGGTTTTCAACTAACTCACATCCAGATATTCTTCGGCTTTGCAAGCTaGCGGCCGCGGCGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: FTPLAVTLGFQLTHIQIFFGFAS*RPRRPA
Trigger: CGCAGGCCGCCGCGGCCGCCAGCTTGCAAAGCCGAA...GAATATCTGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TGGATTTTTACACCTCTTGCGGTAACACTCGGTTTTCAACTAACTCACATCCAGGCGAAAGAGGCCAAATaGCCCCGCCCGTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: WIFTPLAVTLGFQLTHIQAKEAK*PRPSSP
Trigger: CGGGGAGGACGGGCGGGGCCATTTGGCCTCTTTCGC...CTGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAAAATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR CAA 72 bp ATCAGAAGGCAGCCTCTCACTCAGATGTTCTGGGCGTaGCTCTCTTCATGCCTTTCTCCCCGCAGTTCTACA +
Preference number: 4 (lower is better)
Translates to: IRRQPLTQMFWA*LSSCLSPRSST
Trigger: TGTAGAACTGCGGGGAGAAAGGCATGAAGAGAGCAACGCCCAGAACATCTGAGTGAGAGGCTGCCTTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp AGCAAGCAAAACAGTAGGAGAGAGATAACCTGTTTTACTACACTAGGTAAGAAACTGAGGAGCGCCGCCTaGACCGCCATCGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: SKQNSRREITCFTTLGKKLRSAA*TAIAAA
Trigger: AGCCGCGGCGATGGCGGTGCAGGCGGCGCTCCTCAG...TTTCTTACCTAGTGTAGTAAAACAGGTTATCTCTCTCCTACTGTTTTGCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TTCCCATCGTTCTTCAGATTTAGGAGAAACCCACGGAGGCGCGGCGCTCTCCACAAGGAAAGTAAGCACTaGGACTGTGATAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FPSFFRFRRNPRRRGALHKESKH*DCDKGG
Trigger: TCCACCCTTATCACAGTCCCAGTGCTTACTTTCCTT...GTGGAGAGCGCCGCGCCTCCGTGGGTTTCTCCTAAATCTGAAGAACGATGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TTTTTCCCCAAATCTCCCTCGGACAACAGATCATACTCCTCCCTGCAGAGCCCCCTCACTCAGATGTTCTaGGCGTTGCTCTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: FFPKSPSDNRSYSSLQSPLTQMF*ALLSSC
Trigger: GCATGAAGAGAGCAACGCCCAGAACATCTGAGTGAG...GGGGCTCTGCAGGGAGGAGTATGATCTGTTGTCCGAGGGAGATTTGGGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp AGAGGTTACAGTTTGCCCACCCTCTCCCTCCCAAAGTGGCTGGAAAATGGGGAAGCACGTCTTACATGGTaGCAGGAGAGAGAGATAGCA +
Preference number: 4 (lower is better)
Translates to: RGYSLPTLSLPKWLENGEARLTW*QEREIA
Trigger: TGCTATCTCTCTCTCCTGCCACCATGTAAGACGTGC...TTCCCCATTTTCCAGCCACTTTGGGAGGGAGAGGGTGGGCAAACTGTAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR TCA 90 bp AGCAAGCAAAACAGTAGGAGAGAGATAACCTGTTTTACTACACTAGGTAAGAAACGAAAGGGTGCGTGCTaGGGAGCGCCGCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: SKQNSRREITCFTTLGKKRKGAC*GAPPAP
Trigger: CGGTGCAGGCGGCGCTCCTCAGCACGCACCCTTTCG...TTTCTTACCTAGTGTAGTAAAACAGGTTATCTCTCTCCTACTGTTTTGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR TCA 90 bp TTCCTGCAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATTGTGGGTATAAGGACTaGGGAAACAAAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FLQSILGALKPSSSPLQHCGYKD*GNKGRQ
Trigger: CTGCCTCCCTTTGTTTCCTCAGTCCTTATACCCACA...ATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp ATAAATGAAAGAGGTTTAATTGACTCACAGTTCCACATGGCTGGGAGGCCTCATCCTTCCGCTTCGACTTaGCCGGCTTGTCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: INERGLIDSQFHMAGRPHPSAST*PACPAP
Trigger: TGGCGCTGGACAAGCCGGGCAAGTCGAAGCGGAAGG...ATGAGGCCTCCCAGCCATGTGGAACTGTGAGTCAATTAAACCTCTTTCATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp CCCTCACTATCACAAGAACAGCATGGAGGAAACCACCCCCATGATCCAATCACCACTCACAGTTCCACATaGCTGGGAGGCCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: PSLSQEQHGGNHPHDPITTHSST*LGGLMK
Trigger: TTTCATGAGGCCTCCCAGCCATGTGGAACTGTGAGT...GGTGATTGGATCATGGGGGTGGTTTCCTCCATGCTGTTCTTGTGATAGTGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp TTTTTCCCCAAATCTCCCTCGGACAACAGATCATACTCCTCCCTGCAGAGCCCCCCTACAAAAGAGATGTaGAAGAAAAGCCGGCCGAAA +
Preference number: 4 (lower is better)
Translates to: FFPKSPSDNRSYSSLQSPPTKEM*KKSRPK
Trigger: TTTCGGCCGGCTTTTCTTGCACATCTCTTTTGTAGG...GGGGCTCTGCAGGGAGGAGTATGATCTGTTGTCCGAGGGAGATTTGGGGAAAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp TCAGATTTAGGAGAAACCCACGGAGGCGCGGCGCTCTCCACAGCCGTCTCTAATTCCATTCATCAGACCTaGTATTCAGGGAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: SDLGETHGGAALSTAVSNSIHQT*YSGNRN
Trigger: ATTTCTGTTCCCTGAATAGCAGGTCTGATGAATGGA...ATTAGAGACGGCTGTGGAGAGCGCCGCGCCTCCGTGGGTTTCTCCTAAATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TCAGATTTAGGAGAAACCCACGGAGGCGCGGCGCTCTCCACAGCCGTCTCTAATATTAGAGATGACATTTaGCTAGGGACACAGATCCAA +
Preference number: 4 (lower is better)
Translates to: SDLGETHGGAALSTAVSNIRDDI*LGTQIQ
Trigger: TTGGATCTGTGTCCCTAGCCAAATGTCATCTCTAAT...ATTAGAGACGGCTGTGGAGAGCGCCGCGCCTCCGTGGGTTTCTCCTAAATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp CAAATCTCCCTCGGACAACAGATCATACTCCTCCCTGCAGAGCCCCTTCAGATTAAGGCACGTCTTACATaGTGGCAGGAGAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: QISLGQQIILLPAEPLQIKARLT*WQEREI
Trigger: TATCTCTCTCTCCTGCCACCATGTAAGACGTGCCTT...AATCTGAAGGGGCTCTGCAGGGAGGAGTATGATCTGTTGTCCGAGGGAGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR CAA 72 bp CACATCCAGATATTCCTGCAATCAATCCTGGGTGCCTaGAAGCCAAGCAGCTCTCCTTTGCAGCATCATCAG +
Preference number: 4 (lower is better)
Translates to: HIQIFLQSILGA*KPSSSPLQHHQ
Trigger: CTGATGATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAATATCTGGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR TCA 90 bp CAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATCATCAGTACACTGACCTTCGCTaGAAAATAGAAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: QSILGALKPSSSPLQHHQYTDLR*KIEGTG
Trigger: ACCTGTCCCTTCTATTTTTCAGCGAAGGTCAGTGTA...CTGATGATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR TCA 90 bp AGAGGTTACAGTTTGCCCACCCTCTCCCTCCCAAAGTGGCTGGAAAATGGGGAACAACCAGTTGTGAAGTaGGTAGAAGAACATTACCGT +
Preference number: 4 (lower is better)
Translates to: RGYSLPTLSLPKWLENGEQPVVK*VEEHYR
Trigger: ACGGTAATGTTCTTCTACTCACTTCACAACTGGTTG...TTCCCCATTTTCCAGCCACTTTGGGAGGGAGAGGGTGGGCAAACTGTAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp CCCTCACTATCACAAGAACAGCATGGAGGAAACCACCCCCATGATCCAATCACCGGTTTCATCTCCACGTaGATTTTCCCATCGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PSLSQEQHGGNHPHDPITGFIST*IFPSFF
Trigger: GAAGAACGATGGGAAAATGCACGTGGAGATGAAACC...GGTGATTGGATCATGGGGGTGGTTTCCTCCATGCTGTTCTTGTGATAGTGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TTCCCATCGTTCTTCAGATTTAGGAGAAACCCACGGAGGCGCGGCGCTCTCCACTGTGCAAGTGTATCCTaGATTGTATTCACAACAGTT +
Preference number: 4 (lower is better)
Translates to: FPSFFRFRRNPRRRGALHCASVS*IVFTTV
Trigger: AACTGTTGTGAATACAATCCAGGATACACTTGCACA...GTGGAGAGCGCCGCGCCTCCGTGGGTTTCTCCTAAATCTGAAGAACGATGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR TCA 90 bp ATCCAATCACCTTCCACTAGGACCTCCCTCGACATGTGGGGATTACAATTAGAGACCATCTTGGTTTCTTaGCTCCTCTGGTCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: IQSPSTRTSLDMWGLQLETILVS*LLWSSK
Trigger: CTTACTGGACCAGAGGAGTCAAGAAACCAAGATGGT...CTCTAATTGTAATCCCCACATGTCGAGGGAGGTCCTAGTGGAAGGTGATTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR TCA 90 bp GGAGAGAGAGATAGCAAGGAAGTGCCACACTTTATAACCATCAGATCTCATGAGAATCATGGCAGAAGGTaGAGCAGCAGGAAGGCACGT +
Preference number: 4 (lower is better)
Translates to: GERDSKEVPHFITIRSHENHGRR*SSRKAR
Trigger: ACGTGCCTTCCTGCTGCTTCACCTTCTGCCATGATT...CTCATGAGATCTGATGGTTATAAAGTGTGGCACTTCCTTGCTATCTCTCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp CCCTCACTATCACAAGAACAGCATGGAGGAAACCACCCCCATGATCCAATCACCGGCTTTAATTCAAAATaGACTCAAGGAGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSLSQEQHGGNHPHDPITGFNSK*TQGEGR
Trigger: CCTTCCCTCTCCTTGAGTGCATTTTGAATTAAAGCC...GGTGATTGGATCATGGGGGTGGTTTCCTCCATGCTGTTCTTGTGATAGTGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp GCTAAGCGACCAGACGGAAAACCGTCCTGTAAGAAAACACCCAAATCAGTAAGTCAAGCAGCTCTCCTTTaGAGCATCATCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AKRPDGKPSCKKTPKSVSQAALL*SIIRRQ
Trigger: CTGCCTTCTGATGATGCTGCAAAGGAGAGCTGCTTG...ACTTACTGATTTGGGTGTTTTCTTACAGGACGGTTTTCCGTCTGGTCGCTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TGGATTTTTACACCTCTTGCGGTAACACTCGGTTTTCAACTAACTCACATCCAGTGCAGGTACTTGCGGTaGTTCACCTTCCGCTTCGAC +
Preference number: 4 (lower is better)
Translates to: WIFTPLAVTLGFQLTHIQCRYLR*FTFRFD
Trigger: GTCGAAGCGGAAGGTGAACCACCGCAAGTACCTGCA...CTGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAAAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp CACCTAACAAAGCTAAGCGACCAGACGGAAAACCGTCCTGTAAGAAAACACCCAAATAGAAGGGACAGGTaGCTACAGAAGCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: HLTKLSDQTENRPVRKHPNRRDR*LQKPAL
Trigger: AAGAGCTGGCTTCTGTAGCCACCTGTCCCTTCTATT...TGGGTGTTTTCTTACAGGACGGTTTTCCGTCTGGTCGCTTAGCTTTGTTAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp ATCCAATCACCTTCCACTAGGACCTCCCTCGACATGTGGGGATTACAATTAGAGACATCCAGATATTCCTaGAATCAATCCTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: IQSPSTRTSLDMWGLQLETSRYS*NQSWVP
Trigger: AGGCACCCAGGATTGATTGCAGGAATATCTGGATGT...CTCTAATTGTAATCCCCACATGTCGAGGGAGGTCCTAGTGGAAGGTGATTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp CTTACAATCATGGCAGAAGGTGAAGCAGCAGGAAGGCACGTCTTACATGGTGGCGATTTTTACACCTCTTaGGGTAACACTCGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LTIMAEGEAAGRHVLHGGDFYTS*GNTRFS
Trigger: TGAAAACCGAGTGTTACCGCAAGAGGTGTAAAAATC...GCCACCATGTAAGACGTGCCTTCCTGCTGCTTCACCTTCTGCCATGATTGTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp TTTCCGTGTGTAGAAACCATTTATATATACACAGCAGAACCAATCAAGCACTGCCGGATCTCCAAAGGCTaGAATAGGCGGTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: FPCVETIYIYTAEPIKHCRISKG*NRRCGC
Trigger: ACAGCCGCACCGCCTATTCCAGCCTTTGGAGATCCG...GCAGTGCTTGATTGGTTCTGCTGTGTATATATAAATGGTTTCTACACACGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR TCA 90 bp GCTAAGCGACCAGACGGAAAACCGTCCTGTAAGAAAACACCCAAATCAGTAAGTAAAAGAGTTAAACCGTaGCAGAAGAGAACCCTACCC +
Preference number: 4 (lower is better)
Translates to: AKRPDGKPSCKKTPKSVSKRVKP*QKRTLP
Trigger: GGGTAGGGTTCTCTTCTGTCACGGTTTAACTCTTTT...ACTTACTGATTTGGGTGTTTTCTTACAGGACGGTTTTCCGTCTGGTCGCTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp AGAGGTTACAGTTTGCCCACCCTCTCCCTCCCAAAGTGGCTGGAAAATGGGGAAGAACAGAAATTCCTTTaGAAACTTCACACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RGYSLPTLSLPKWLENGEEQKFL*KLHTFL
Trigger: AAGAAAGGTGTGAAGTTTCCAAAGGAATTTCTGTTC...TTCCCCATTTTCCAGCCACTTTGGGAGGGAGAGGGTGGGCAAACTGTAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR CAA 72 bp CTCAGATCACGAAAATTGATACAAAGAGGTTACAGTTaGCCCACCCTCTCCCTCCCAAAGTGGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LRSRKLIQRGYS*PTLSLPKWLEN
Trigger: ATTTTCCAGCCACTTTGGGAGGGAGAGGGTGGGCAAACTGTAACCTCTTTGTATCAATTTTCGTGATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
3UTR CAA 72 bp GAACATTACCGTCTTCACCCTCTCAGATCACGAAAATaGATACAAAGAGGTTACAGTTTGCCCACCCTCTCC +
Preference number: 4 (lower is better)
Translates to: EHYRLHPLRSRK*IQRGYSLPTLS
Trigger: GGAGAGGGTGGGCAAACTGTAACCTCTTTGTATCAATTTTCGTGATCTGAGAGGGTGAAGACGGTAATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp TTCCTGCAATCAATCCTGGGTGCCTTGAAGCCAAGCAGCTCTCCTTTGCAGCATTTCTATTTCCTGTGGTaGTTTCTTAAGAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FLQSILGALKPSSSPLQHFYFLW*FLKKGF
Trigger: AAAGCCTTTCTTAAGAAAGCACCACAGGAAATAGAA...ATGCTGCAAAGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGATTGCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp AGCAAGCAAAACAGTAGGAGAGAGATAACCTGTTTTACTACACTAGGTAAGAAAAAAGAGGTTACAGTTTaGCCACCCTCTCCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SKQNSRREITCFTTLGKKKEVTV*PPSPSQ
Trigger: TTGGGAGGGAGAGGGTGGGCAAACTGTAACCTCTTT...TTTCTTACCTAGTGTAGTAAAACAGGTTATCTCTCTCCTACTGTTTTGCTTGCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp TTTACACCTCTTGCGGTAACACTCGGTTTTCAACTAACTCACATCCAGATATTCGAACCAATCAAGCACTaGCACAGCCTCAAGACATTT +
Preference number: 4 (lower is better)
Translates to: FTPLAVTLGFQLTHIQIFEPIKH*HSLKTF
Trigger: AAATGTCTTGAGGCTGTGGCAGTGCTTGATTGGTTC...GAATATCTGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp GATGACATTTGGCTAGGGACACAGATCCAAACAGTATCAAGCACCTACATCATGTCGTTCTATTTCCTGTaGTGCTTTCTTAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: DDIWLGTQIQTVSSTYIMSFYFL*CFLKKG
Trigger: GCCTTTCTTAAGAAAGCACCACAGGAAATAGAACGA...CATGATGTAGGTGCTTGATACTGTTTGGATCTGTGTCCCTAGCCAAATGTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp AGCAAGCAAAACAGTAGGAGAGAGATAACCTGTTTTACTACACTAGGTAAGAAAAGATGTTCTGGGCGTTaGTCTCTTCATGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SKQNSRREITCFTTLGKKRCSGR*SLHAFL
Trigger: GAGAAAGGCATGAAGAGAGCAACGCCCAGAACATCT...TTTCTTACCTAGTGTAGTAAAACAGGTTATCTCTCTCCTACTGTTTTGCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp GATGACATTTGGCTAGGGACACAGATCCAAACAGTATCAAGCACCTACATCATGAATGTTTTCCTACTGTaGAAGTGTATCCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: DDIWLGTQIQTVSSTYIMNVFLL*KCILDC
Trigger: ACAATCCAGGATACACTTGCACAGTAGGAAAACATT...CATGATGTAGGTGCTTGATACTGTTTGGATCTGTGTCCCTAGCCAAATGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CCA 90 bp AGCAAGCAAAACAGTAGGAGAGAGATAACCTGTTTTACTACACTAGGTAAGAAATACCCCAAACCATCTTaGTTTCTTGACTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SKQNSRREITCFTTLGKKYPKPS*FLDSSG
Trigger: ACCAGAGGAGTCAAGAAACCAAGATGGTTTGGGGTA...TTTCTTACCTAGTGTAGTAAAACAGGTTATCTCTCTCCTACTGTTTTGCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR GCA 90 bp TTTCCGTGTGTAGAAACCATTTATATATACACAGCAGAACCAATCAAGCACTGCCTTAAATGCCTGGGATaGGGAAACAATGTTGATATT +
Preference number: 4 (lower is better)
Translates to: FPCVETIYIYTAEPIKHCLKCLG*GNNVDI
Trigger: AATATCAACATTGTTTCCGCATCCCAGGCATTTAAG...GCAGTGCTTGATTGGTTCTGCTGTGTATATATAAATGGTTTCTACACACGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 90 bp GGGACGTGGCGCAGCGAGTCGAAGAGCGCGGCCAGACTTCGGCTTTaGAAGCTGGCGGCCGCGGCGGCCTGCGACGCCTCCCGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GTWRSESKSAARLRL*KLAAAAACDASRRG
Trigger: CCCCCGGCGGGAGGCGTCGCAGGCCGCCGCGGCCGCCAGCTTGCAAAGCCGAAGTCTGGCCGCGCTCTTCGACTCGCTGCGCCACGTCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS TCA 90 bp GCCCCGACGGGCCACACCCGCCGCCGCCTGCCCGGGACGGCTCCGTaGAGAAGGACGGAGGCAGATTGCGTGCCCGCAGCGGGACCTTCC +
Preference number: 5 (lower is better)
Translates to: APTGHTRRRLPGTAP*RRTEADCVPAAGPS
Trigger: GGAAGGTCCCGCTGCGGGCACGCAATCTGCCTCCGTCCTTCTTCACGGAGCCGTCCCGGGCAGGCGGCGGCGGGTGTGGCCCGTCGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 90 bp CCGAAGCCGAAGGGCACGAAAGGGTGCGTGCTGAGGAGCGCCGCCTaGACCGCCATCGCCGCGGCTCCCGGGCTGTCCGCAGCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PKPKGTKGCVLRSAA*TAIAAAPGLSAALP
Trigger: GGGCAGCGCTGCGGACAGCCCGGGAGCCGCGGCGATGGCGGTGCAGGCGGCGCTCCTCAGCACGCACCCTTTCGTGCCCTTCGGCTTCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 90 bp GCCCAAGCTCACGTCCGGCCCCGACGGGCCACACCCGCCGCCGCCTaGCCGGGACGGCTCCGTGAAGAAGGACGGAGGCAGATTGCGTGC +
Preference number: 5 (lower is better)
Translates to: AQAHVRPRRATPAAA*PGRLREEGRRQIAC
Trigger: GCACGCAATCTGCCTCCGTCCTTCTTCACGGAGCCGTCCCGGGCAGGCGGCGGCGGGTGTGGCCCGTCGGGGCCGGACGTGAGCTTGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 90 bp GGCTCCGGCGGGGAACACGTCGAGAGGCTCGGCGGCAAGCAAGACTaGCGCCTCCGTGCCGGCGCCGTAGTCGGGCCCCAGCAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: GSGGEHVERLGGKQD*RLRAGAVVGPQQLK
Trigger: TTTGAGCTGCTGGGGCCCGACTACGGCGCCGGCACGGAGGCGGCAGTCTTGCTTGCCGCCGAGCCTCTCGACGTGTTCCCCGCCGGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 90 bp GGAACACGTCGAGAGGCTCGGCGGCAAGCAAGACTGCCGCCTCCGTaGCGGCGCCGTAGTCGGGCCCCAGCAGCTCAAAGAACTCCACGG +
Preference number: 5 (lower is better)
Translates to: GTRREARRQARLPPP*RRRSRAPAAQRTPR
Trigger: CCGTGGAGTTCTTTGAGCTGCTGGGGCCCGACTACGGCGCCGGCACGGAGGCGGCAGTCTTGCTTGCCGCCGAGCCTCTCGACGTGTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp ATTCCTTTGGAAACTTCACACCTTTCTTTATGCCCTTCCGTGGGGAGAGTGTGGAAGGACGGAGGCAGATaGCGTGCCCGCAGCGGGACC +
Preference number: 5 (lower is better)
Translates to: IPLETSHLSLCPSVGRVWKDGGR*RARSGT
Trigger: GGTCCCGCTGCGGGCACGCAATCTGCCTCCGTCCTT...CCACACTCTCCCCACGGAAGGGCATAAAGAAAGGTGTGAAGTTTCCAAAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp CACCTAACAAAGCTAAGCGACCAGACGGAAAACCGTCCTGTAAGAAAACACCCAACCTTCCGCTTCGACTaGCCCGGCTTGTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: HLTKLSDQTENRPVRKHPTFRFD*PGLSSA
Trigger: GGCGCTGGACAAGCCGGGCAAGTCGAAGCGGAAGGT...TGGGTGTTTTCTTACAGGACGGTTTTCCGTCTGGTCGCTTAGCTTTGTTAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp TTCCCATCGTTCTTCAGATTTAGGAGAAACCCACGGAGGCGCGGCGCTCTCCACCCAAGCAGCTCTCCTTaGCAGCATCATCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: FPSFFRFRRNPRRRGALHPSSSP*QHHQKA
Trigger: TGCCTTCTGATGATGCTGCAAAGGAGAGCTGCTTGG...GTGGAGAGCGCCGCGCCTCCGTGGGTTTCTCCTAAATCTGAAGAACGATGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp CACCTAACAAAGCTAAGCGACCAGACGGAAAACCGTCCTGTAAGAAAACACCCATCGAAACAGCAGCCCTaGTCCAGGGCTCCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: HLTKLSDQTENRPVRKHPSKQQP*SRAPKA
Trigger: CGCCTTCGGAGCCCTGGACAAGGGCTGCTGTTTCGA...TGGGTGTTTTCTTACAGGACGGTTTTCCGTCTGGTCGCTTAGCTTTGTTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp CAAATCTCCCTCGGACAACAGATCATACTCCTCCCTGCAGAGCCCCTTCAGATTAGCGCCAGCTTGATGTaGCTGGACGCCGAGTCAATG +
Preference number: 5 (lower is better)
Translates to: QISLGQQIILLPAEPLQISASLM*LDAESM
Trigger: CATTGACTCGGCGTCCAGCAACATCAAGCTGGCGCT...AATCTGAAGGGGCTCTGCAGGGAGGAGTATGATCTGTTGTCCGAGGGAGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp TGGATTTTTACACCTCTTGCGGTAACACTCGGTTTTCAACTAACTCACATCCAGGGCCAGACTTCGGCTTaGCAAGCTGGCGGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: WIFTPLAVTLGFQLTHIQGQTSA*QAGGRG
Trigger: GCCGCGGCCGCCAGCTTGCAAAGCCGAAGTCTGGCC...CTGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAAAATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp CCCTCACTATCACAAGAACAGCATGGAGGAAACCACCCCCATGATCCAATCACCCAAAGAGGTTACAGTTaGCCCACCCTCTCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: PSLSQEQHGGNHPHDPITQRGYS*PTLSLP
Trigger: TGGGAGGGAGAGGGTGGGCAAACTGTAACCTCTTTG...GGTGATTGGATCATGGGGGTGGTTTCCTCCATGCTGTTCTTGTGATAGTGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp ATCCAATCACCTTCCACTAGGACCTCCCTCGACATGTGGGGATTACAATTAGAGTCAATCCTGGGTGCCTaGAAGCCAAGCAGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: IQSPSTRTSLDMWGLQLESILGA*KPSSSP
Trigger: AGGAGAGCTGCTTGGCTTCAAGGCACCCAGGATTGA...CTCTAATTGTAATCCCCACATGTCGAGGGAGGTCCTAGTGGAAGGTGATTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp TGGATTTTTACACCTCTTGCGGTAACACTCGGTTTTCAACTAACTCACATCCAGTTGTCCAGCGCCAGCTaGATGTTGCTGGACGCCGAG +
Preference number: 5 (lower is better)
Translates to: WIFTPLAVTLGFQLTHIQLSSAS*MLLDAE
Trigger: CTCGGCGTCCAGCAACATCAAGCTGGCGCTGGACAA...CTGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAAAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp ATAAATGAAAGAGGTTTAATTGACTCACAGTTCCACATGGCTGGGAGGCCTCATTTCGACTTGCCCGGCTaGTCCAGCGCCAGCTTGATG +
Preference number: 5 (lower is better)
Translates to: INERGLIDSQFHMAGRPHFDLPG*SSASLM
Trigger: CATCAAGCTGGCGCTGGACAAGCCGGGCAAGTCGAA...ATGAGGCCTCCCAGCCATGTGGAACTGTGAGTCAATTAAACCTCTTTCATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp ATCCAATCACCTTCCACTAGGACCTCCCTCGACATGTGGGGATTACAATTAGAGCCCTTAACCAACCTATaGGTGCCATGTGTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: IQSPSTRTSLDMWGLQLEPLTNL*VPCVLS
Trigger: AGAGAGGACACATGGCACCAATAGGTTGGTTAAGGG...CTCTAATTGTAATCCCCACATGTCGAGGGAGGTCCTAGTGGAAGGTGATTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp AGAGGTTACAGTTTGCCCACCCTCTCCCTCCCAAAGTGGCTGGAAAATGGGGAAGGAACAGAAATTCCTTaGGAAACTTCACACCTTTCT +
Preference number: 5 (lower is better)
Translates to: RGYSLPTLSLPKWLENGEGTEIP*ETSHLS
Trigger: AGAAAGGTGTGAAGTTTCCAAAGGAATTTCTGTTCC...TTCCCCATTTTCCAGCCACTTTGGGAGGGAGAGGGTGGGCAAACTGTAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp AGCAAGCAAAACAGTAGGAGAGAGATAACCTGTTTTACTACACTAGGTAAGAAACAGATGTTCTGGGCGTaGCTCTCTTCATGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SKQNSRREITCFTTLGKKQMFWA*LSSCLS
Trigger: AGAAAGGCATGAAGAGAGCAACGCCCAGAACATCTG...TTTCTTACCTAGTGTAGTAAAACAGGTTATCTCTCTCCTACTGTTTTGCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp GATGACATTTGGCTAGGGACACAGATCCAAACAGTATCAAGCACCTACATCATGCTCAGATCACGAAAATaGATACAAAGAGGTTACAGT +
Preference number: 5 (lower is better)
Translates to: DDIWLGTQIQTVSSTYIMLRSRK*IQRGYS
Trigger: ACTGTAACCTCTTTGTATCAATTTTCGTGATCTGAG...CATGATGTAGGTGCTTGATACTGTTTGGATCTGTGTCCCTAGCCAAATGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp TGGATTTTTACACCTCTTGCGGTAACACTCGGTTTTCAACTAACTCACATCCAGCAAGTGTATCCTGGATaGTATTCACAACAGTTTAGA +
Preference number: 5 (lower is better)
Translates to: WIFTPLAVTLGFQLTHIQQVYPG*YSQQFR
Trigger: TCTAAACTGTTGTGAATACAATCCAGGATACACTTG...CTGGATGTGAGTTAGTTGAAAACCGAGTGTTACCGCAAGAGGTGTAAAAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS-3UTR CAA 90 bp AGCAAGCAAAACAGTAGGAGAGAGATAACCTGTTTTACTACACTAGGTAAGAAAAAATGGAACCCAGGTTaGCCAAATTTAAGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: SKQNSRREITCFTTLGKKKWNPG*PNLSLL
Trigger: TAGGAGACTTAAATTTGGCAAACCTGGGTTCCATTT...TTTCTTACCTAGTGTAGTAAAACAGGTTATCTCTCTCCTACTGTTTTGCTTGCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 72 bp CACGTCCGGCCCCGACGGGCCACACCCGCCGCCGCCTaGCCGGGACGGCTCCGTGAAGAAGGACGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: HVRPRRATPAAA*PGRLREEGRRQ
Trigger: CTGCCTCCGTCCTTCTTCACGGAGCCGTCCCGGGCAGGCGGCGGCGGGTGTGGCCCGTCGGGGCCGGACGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CAA 90 bp GGGGACGTGGCGCAGCGAGTCGAAGAGCGCGGCCAGACTTCGGCTTaGCAAGCTGGCGGCCGCGGCGGCCTGCGACGCCTCCCGCCGGGG +
Preference number: 6 (lower is better)
Translates to: GDVAQRVEERGQTSA*QAGGRGGLRRLPPG
Trigger: CCCCGGCGGGAGGCGTCGCAGGCCGCCGCGGCCGCCAGCTTGCAAAGCCGAAGTCTGGCCGCGCTCTTCGACTCGCTGCGCCACGTCCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CCA 72 bp AGTCGAAGAGCGCGGCCAGACTTCGGCTTTGCAAGCTaGCGGCCGCGGCGGCCTGCGACGCCTCCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: SRRARPDFGFAS*RPRRPATPPAG
Trigger: CCCGGCGGGAGGCGTCGCAGGCCGCCGCGGCCGCCAGCTTGCAAAGCCGAAGTCTGGCCGCGCTCTTCGACT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 72 bp AAGGGCACGAAAGGGTGCGTGCTGAGGAGCGCCGCCTaGACCGCCATCGCCGCGGCTCCCGGGCTGTCCGCA +
Preference number: 6 (lower is better)
Translates to: KGTKGCVLRSAA*TAIAAAPGLSA
Trigger: TGCGGACAGCCCGGGAGCCGCGGCGATGGCGGTGCAGGCGGCGCTCCTCAGCACGCACCCTTTCGTGCCCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 72 bp TCCGGGGAGCCCCCGAAGCCGAAGGGCACGAAAGGGTaGGTGCTGAGGAGCGCCGCCTGCACCGCCATCGCC +
Preference number: 6 (lower is better)
Translates to: SGEPPKPKGTKG*VLRSAACTAIA
Trigger: GGCGATGGCGGTGCAGGCGGCGCTCCTCAGCACGCACCCTTTCGTGCCCTTCGGCTTCGGGGGCTCCCCGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 72 bp CGCAGCGAGTCGAAGAGCGCGGCCAGACTTCGGCTTTaGAAGCTGGCGGCCGCGGCGGCCTGCGACGCCTCC +
Preference number: 6 (lower is better)
Translates to: RSESKSAARLRL*KLAAAAACDAS
Trigger: GGAGGCGTCGCAGGCCGCCGCGGCCGCCAGCTTGCAAAGCCGAAGTCTGGCCGCGCTCTTCGACTCGCTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 72 bp GGGGAACACGTCGAGAGGCTCGGCGGCAAGCAAGACTaGCGCCTCCGTGCCGGCGCCGTAGTCGGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: GEHVERLGGKQD*RLRAGAVVGPQ
Trigger: CTGGGGCCCGACTACGGCGCCGGCACGGAGGCGGCAGTCTTGCTTGCCGCCGAGCCTCTCGACGTGTTCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CAA 72 bp GCGCAGCGAGTCGAAGAGCGCGGCCAGACTTCGGCTTaGCAAGCTGGCGGCCGCGGCGGCCTGCGACGCCTC +
Preference number: 6 (lower is better)
Translates to: AQRVEERGQTSA*QAGGRGGLRRL
Trigger: GAGGCGTCGCAGGCCGCCGCGGCCGCCAGCTTGCAAAGCCGAAGTCTGGCCGCGCTCTTCGACTCGCTGCGC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CAA 90 bp CCGCCGCCTGCCCGGGACGGCTCCGTGAAGAAGGACGGAGGCAGATaGCGTGCCCGCAGCGGGACCTTCCTGGCCCCTGGGATCGCCGTG +
Preference number: 6 (lower is better)
Translates to: PPPARDGSVKKDGGR*RARSGTFLAPGIAV
Trigger: CACGGCGATCCCAGGGGCCAGGAAGGTCCCGCTGCGGGCACGCAATCTGCCTCCGTCCTTCTTCACGGAGCCGTCCCGGGCAGGCGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CAA 72 bp GCCCGGGACGGCTCCGTGAAGAAGGACGGAGGCAGATaGCGTGCCCGCAGCGGGACCTTCCTGGCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: ARDGSVKKDGGR*RARSGTFLAPG
Trigger: CCCAGGGGCCAGGAAGGTCCCGCTGCGGGCACGCAATCTGCCTCCGTCCTTCTTCACGGAGCCGTCCCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 72 bp CGAGAGGCTCGGCGGCAAGCAAGACTGCCGCCTCCGTaGCGGCGCCGTAGTCGGGCCCCAGCAGCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: REARRQARLPPP*RRRSRAPAAQR
Trigger: TCTTTGAGCTGCTGGGGCCCGACTACGGCGCCGGCACGGAGGCGGCAGTCTTGCTTGCCGCCGAGCCTCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CAA 72 bp GGAGCCCCGGTCTCATCGTCCTCGAAACAGCAGCCCTaGTCCAGGGCTCCGAAGGCGCCCCCTAGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: GAPVSSSSKQQP*SRAPKAPPSPS
Trigger: GGACGGGCTAGGGGGCGCCTTCGGAGCCCTGGACAAGGGCTGCTGTTTCGAGGACGATGAGACCGGGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CCA 72 bp GCGCCCCTTCCCAAACCCCGTCGGATCTCCAAAGGCTaGAATAGGCGGTGCGGCTGTAGCCCGCGCTGTAAT +
Preference number: 6 (lower is better)
Translates to: APLPKPRRISKG*NRRCGCSPRCN
Trigger: ATTACAGCGCGGGCTACAGCCGCACCGCCTATTCCAGCCTTTGGAGATCCGACGGGGTTTGGGAAGGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CAA 72 bp TTGCGGTGGTTCACCTTCCGCTTCGACTTGCCCGGCTaGTCCAGCGCCAGCTTGATGTTGCTGGACGCCGAG +
Preference number: 6 (lower is better)
Translates to: LRWFTFRFDLPG*SSASLMLLDAE
Trigger: CTCGGCGTCCAGCAACATCAAGCTGGCGCTGGACAAGCCGGGCAAGTCGAAGCGGAAGGTGAACCACCGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS GCA 72 bp AAACCCCGTCGGATCTCCAAAGGCTGGAATAGGCGGTaGGGCTGTAGCCCGCGCTGTAATCGTAGGACACCT +
Preference number: 6 (lower is better)
Translates to: KPRRISKGWNRR*GCSPRCNRRTP
Trigger: AGGTGTCCTACGATTACAGCGCGGGCTACAGCCGCACCGCCTATTCCAGCCTTTGGAGATCCGACGGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CAA 72 bp TGCAGGTACTTGCGGTGGTTCACCTTCCGCTTCGACTaGCCCGGCTTGTCCAGCGCCAGCTTGATGTTGCTG +
Preference number: 6 (lower is better)
Translates to: CRYLRWFTFRFD*PGLSSASLMLL
Trigger: CAGCAACATCAAGCTGGCGCTGGACAAGCCGGGCAAGTCGAAGCGGAAGGTGAACCACCGCAAGTACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CAA 90 bp TGCAGGTACTTGCGGTGGTTCACCTTCCGCTTCGACTTGCCCGGCTaGTCCAGCGCCAGCTTGATGTTGCTGGACGCCGAGTCAATGAAG +
Preference number: 6 (lower is better)
Translates to: CRYLRWFTFRFDLPG*SSASLMLLDAESMK
Trigger: CTTCATTGACTCGGCGTCCAGCAACATCAAGCTGGCGCTGGACAAGCCGGGCAAGTCGAAGCGGAAGGTGAACCACCGCAAGTACCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5
CDS CAA 72 bp TTCGACTTGCCCGGCTTGTCCAGCGCCAGCTTGATGTaGCTGGACGCCGAGTCAATGAAGCTGAGTAGATCG +
Preference number: 6 (lower is better)
Translates to: FDLPGLSSASLM*LDAESMKLSRS
Trigger: CGATCTACTCAGCTTCATTGACTCGGCGTCCAGCAACATCAAGCTGGCGCTGGACAAGCCGGGCAAGTCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329203.5