RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM181A (Homo sapiens)

Ensembl gene IDs: ENSG00000140067

Ensembl transcript IDs: ENST00000267594.5, ENST00000554404.1, ENST00000556222.1, ENST00000557000.2, ENST00000557719.1, ENST00000611800.2, ENST00000617881.3, ENST00000620448.3, ENST00000626058.1, ENST00000629121.1

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTaGCCCAGCCACCTCCTCACAGGAGAGCGCCTCGGGGACCTCGAC +
Preference number: 1 (lower is better)
Translates to: LPSTPMRTQTEEATL*PSHLLTGERLGDLD
Trigger: GTCGAGGTCCCCGAGGCGCTCTCCTGTGAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR GCA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTaGACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: GDCKARKGNIPVPMV*TGTAGQAAGPWPAW
Trigger: CCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR CCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATaGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTG +
Preference number: 1 (lower is better)
Translates to: SGVTARQGRATSQYL*SAQGQRDKLLGPGL
Trigger: CAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR GCA 90 bp TGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTaGAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACA +
Preference number: 1 (lower is better)
Translates to: WVAGKQMRLSGFWGD*KARKGNIPVPMVCT
Trigger: TGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR GCA 90 bp ACAACAACTGAGATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATaGGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCA +
Preference number: 1 (lower is better)
Translates to: TTTEIGSQSGWQVNR*VSLASGVTARQGRA
Trigger: TGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATCTCAGTTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR CCA 90 bp ACAAGAAGAACAAGAACAACAACTGAGATTGGCTCGCAGAGTGGGTaGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCA +
Preference number: 1 (lower is better)
Translates to: TRRTRTTTEIGSQSG*QVNRCVSLASGVTA
Trigger: TGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATCTCAGTTGTTGTTCTTGTTCTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR-3UTR GCA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCGGACCTCGACACTCCTaGAGGCCAGAGGTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: LPSTPMRTQTEEATLWPSGPRHS*RPEVGA
Trigger: AGCCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCC...GCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR-3UTR GCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCGGACCTCGACACTCCTaGAGGCCAGAGGTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLGPRHS*RPEVGA
Trigger: AGCCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCC...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR-3UTR GCA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGGACCTCGACACTCCTaGAGGCCAGAGGTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGGPRHS*RPEVGA
Trigger: AGCCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCC...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR-3UTR GCA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACGACAGCGGGACAAGCTaGTGGGCCCTGGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: VSLASGVTARQGRATSQYDSGTS*WALACL
Trigger: CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTC...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR-3UTR GCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGACAGCGGGACAAGCTaGTGGGCCCTGGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWDSGTS*WALACL
Trigger: CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTC...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR-3UTR GCA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGTGCCCTCCACTCCCATaGGCACACAAACGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: GDCKARKGNIPVPMVCTGCPPLP*AHKRKR
Trigger: CCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCA...CCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR-3UTR CCA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTACATCCCAGTACCTATaGTCTGCACAGGGACAGCGG +
Preference number: 2 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGTSQYL*SAQGQR
Trigger: CCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGT...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR-3UTR GCA 90 bp TCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGTGCCCTCCACTCCCATaGGCACACAAACGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: SGFWGDCKARKGNIPVPMCPPLP*AHKRKR
Trigger: CCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCA...CATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
3UTR CCA 72 bp ACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATaGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: TARQGRATSQYL*SAQGQRDKLLG
Trigger: GCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGCCAGAGGTGGGGGCTaGGGCCCTCTCCGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGARGGG*GPLRVA
Trigger: AGCCACGCGGAGAGGGCCTCAGCCCCCACCTCTGGC...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGGGAGCGGCGGCAGGGTaGGGACTTATCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGGAAAG*GLIQGC
Trigger: GCAGCCCTGGATAAGTCCGCACCCTGCCGCCGCTCC...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGCCAGGAGCAGCCTCCTaGGCCGGTCCTCAGACCCCC +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGPGAAS*AGPQTP
Trigger: GGGGGTCTGAGGACCGGCCCAGGAGGCTGCTCCTGG...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGAGCGGGACAAGCTGCTaGGCCCTGGCCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGSGTSC*ALACLG
Trigger: CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCT...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGGCTGACCTTGCGGGCTaGTCTCAGGCTGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGADLAG*SQAAGS
Trigger: GCTGCCCGCAGCCTGAGATCAGCCCGCAAGGTCAGC...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR CCA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGCACCCCCGCCGGGGCTaGAATCAGGGCCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGHPRRG*NQGPNP
Trigger: TGGATTTGGGCCCTGATTCCAGCCCCGGCGGGGGTG...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGGCACCTGGCCAGGCTaGGCAGCTTCTGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGGTWPG*AASGCC
Trigger: GCAGCATCCAGAAGCTGCCCAGCCTGGCCAGGTGCC...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGAGCGGCGGCAGGGTaGGGACTTATCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLGAAAG*GLIQGC
Trigger: GCAGCCCTGGATAAGTCCGCACCCTGCCGCCGCTCC...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGAGGACTCTGAGGCAGTaGCCCCAGGGGGCCCGGATA +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGRTLRQ*PQGARI
Trigger: TATCCGGGCCCCCTGGGGGCACTGCCTCAGAGTCCT...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGGGCCGTCCACATCCTTaGAGAGGTGCGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGGRPHP*RGAPAP
Trigger: GGGAGCTGGCGCACCTCTGCAAGGATGTGGACGGCC...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGGGGCTGATCTCAGGCTaGGGGCAGCAGGGATTCCCC +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGGLISG*GQQGFP
Trigger: GGGGAATCCCTGCTGCCCGCAGCCTGAGATCAGCCC...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR CCA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGTGCAGGTACTTGCGATaGTCCACGGAGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGCRYLR*STERRQ
Trigger: CTGCCGCCGCTCCGTGGACCATCGCAAGTACCTGCA...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGAGCTCCCCGGGAAAGGCTaGGCTCTTCCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: WSAQGQRDKLLGPGLPGELPGKG*ALPPKA
Trigger: GGCCTTTGGAGGAAGAGCCCAGCCTTTCCCGGGGAG...CTCCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGCTGGCTTGGTGGGGATaGGTTTCAGCACCACGGGCC +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGLAWWG*VSAPRA
Trigger: GGCCCGTGGTGCTGAAACCCATCCCCACCAAGCCAG...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCAGCGGGACAAGCTGCTaGGCCCTGGCCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LPSTPMRTQTEEATLWPSSGTSC*ALACLG
Trigger: CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCT...GCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGAGGCTTCTGCAGGTACTTaGGATGGTCCACGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: WSAQGQRDKLLGPGLPGEASAGT*DGPRSG
Trigger: GCCGCTCCGTGGACCATCGCAAGTACCTGCAGAAGC...CTCCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGCAGCTTCTGGATGCTaGCTCTGTGGGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGAASGC*LCGSCS
Trigger: GGAGCAGCTCCCACAGAGGCAGCATCCAGAAGCTGC...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGACCTCGACACTCCTaGAGGCCAGAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLGPRHS*RPEVGA
Trigger: AGCCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCC...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGCACCTGGCCAGGCTaGGCAGCTTCTGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLGTWPG*AASGCC
Trigger: GCAGCATCCAGAAGCTGCCCAGCCTGGCCAGGTGCC...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGGCTGTCTTTTCCTCATaGGCACCTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGAVFSS*APGQAG
Trigger: CCCAGCCTGGCCAGGTGCCCATGAGGAAAAGACAGC...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGCTGTCTTTTCCTCATaGGCACCTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGAVFSS*APGQAG
Trigger: CCCAGCCTGGCCAGGTGCCCATGAGGAAAAGACAGC...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGCACGGCTGGCTTGGTaGGGATGGGTTTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGARLAW*GWVSAP
Trigger: TGGTGCTGAAACCCATCCCCACCAAGCCAGCCGTGC...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGAGGCACGGCTGGCTTGGTaGGGATGGGTTTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: WSAQGQRDKLLGPGLPGEARLAW*GWVSAP
Trigger: TGGTGCTGAAACCCATCCCCACCAAGCCAGCCGTGC...CTCCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGGCACGGCTGGCTTGGTaGGGATGGGTTTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGARLAW*GWVSAP
Trigger: TGGTGCTGAAACCCATCCCCACCAAGCCAGCCGTGC...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGAGCTCCCAGCTTCCTTaGGATCCCACGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGSSQLP*DPTAPA
Trigger: TGCAGGTGCCGTGGGATCTCAAGGAAGCTGGGAGCT...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR TCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGAGACCCCAGGCATCTTaGGCGGCTCCTTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGRPQAS*AAPFQP
Trigger: TGGCTGAAAAGGAGCCGCTCAAGATGCCTGGGGTCT...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAGCCAGAGGTGGGGGCTaGGGCCCTCTCCGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: GKEGQHPSTYGLHRDSGTARGGG*GPLRVA
Trigger: AGCCACGCGGAGAGGGCCTCAGCCCCCACCTCTGGC...TGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGAAGGGCACCGAGCTaGCCTTGCGGGCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLGRAPS*PCGLIS
Trigger: TGAGATCAGCCCGCAAGGTCAGCTCGGTGCCCTTCC...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR GCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGTCACCAGGGGGCCACTaGACGAGGCTTTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGSPGGH*TRLSMK
Trigger: CTTCATGGAAAGCCTCGTGCAGTGGCCCCCTGGTGA...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCGACAGCGGGACAAGCTaGTGGGCCCTGGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLDSGTS*WALACL
Trigger: CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTC...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGGCTTCTGGGGTGACTaGAAGGCAAGGAAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGGFWGD*KARKGN
Trigger: GTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCC...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGCATGGTAGCTGTGGGTaGGCCTTGGCTCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGHGSCG*ALALPR
Trigger: TCTGGGAAGAGCCAAGGCCCACCCACAGCTACCATG...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGCTCCCCGGGAAAGGCTaGGCTCTTCCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLLPGKG*ALPPKA
Trigger: GGCCTTTGGAGGAAGAGCCCAGCCTTTCCCGGGGAG...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGGCTCGCAGAGTGGGTaGCAGGTAAACAGATGCGTC +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGGSQSG*QVNRCV
Trigger: GACGCATCTGTTTACCTGCCACCCACTCTGCGAGCC...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGTCTGGGAGAAGCGCTTaGGCTGCTTCTGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGSGRSA*AASAGT
Trigger: AGTACCTGCAGAAGCAGCTCAAGCGCTTCTCCCAGA...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGGGTAGCCAAAGACATTaGAGATGGGTGGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGGSQRH*RWVGAR
Trigger: CCGTGCCCCCACCCATCTTCAATGTCTTTGGCTACC...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGCCAGAGGTGGGGGCTaGGGCCCTCTCCGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWARGGG*GPLRVA
Trigger: AGCCACGCGGAGAGGGCCTCAGCCCCCACCTCTGGC...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGACCGGGCCTCCACACTaGCCGAAGGTGCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLTGPPH*PKVRPR
Trigger: CCTGGGCCGCACCTTCGGTCAGTGTGGAGGCCCGGT...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR GCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCAGGACTCTGAGGCAGTaGCCCCAGGGGGCCCGGATA +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLRTLRQ*PQGARI
Trigger: TATCCGGGCCCCCTGGGGGCACTGCCTCAGAGTCCT...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGCCAGTACCTATGGTCTaGACAGGGACAGCGGGACAA +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGPVPMV*TGTAGQ
Trigger: TTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGG...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCGGGTGGGGGCACGGCTaGCTTGGTGGGGATGGGTTT +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLGWGHG*LGGDGF
Trigger: AAACCCATCCCCACCAAGCCAGCCGTGCCCCCACCC...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp TGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGAGTGCACTGCCCGCTCATaGAGCTGTCTCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: WSAQGQRDKLLGPGLPGECTARS*SCLSFL
Trigger: AAGAAAGGAGAGACAGCTTCATGAGCGGGCAGTGCA...CTCCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR TCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGTCTGGGAGAAGCGCTTaGGCTGCTTCTGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGSGRSA*AASAGT
Trigger: AGTACCTGCAGAAGCAGCTCAAGCGCTTCTCCCAGA...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGAGCCAGAGGTGGGGGCTaGGGCCCTCTCCGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: VTARQGRATSQYLWSAQGARGGG*GPLRVA
Trigger: AGCCACGCGGAGAGGGCCTCAGCCCCCACCTCTGGC...TCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACACCGGGCCTCCACACTaGCCGAAGGTGCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VSLASGVTARQGRATSQYTGPPH*PKVRPR
Trigger: CCTGGGCCGCACCTTCGGTCAGTGTGGAGGCCCGGT...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR GCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCGAAGAGGGTAGGCTCTaGTGGTGGCCGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLEEGRL*WWPAAP
Trigger: TGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTC...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGCACATCACTGTCGGATaGCATCACCAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLHITVG*HHQGAT
Trigger: AGTGGCCCCCTGGTGATGGCATCCGACAGTGATGTG...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGACTTATCCAGGGCTaGCTTGATGTCGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLGLIQG*LDVAGR
Trigger: GCGTCCAGCGACATCAAGGCAGCCCTGGATAAGTCC...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCGCTTCTGCAGGTACTTaGGATGGTCCACGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: LPSTPMRTQTEEATLWPSASAGT*DGPRSG
Trigger: GCCGCTCCGTGGACCATCGCAAGTACCTGCAGAAGC...GCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCTGCAGGTACTTGCGATaGTCCACGGAGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLCRYLR*STERRQ
Trigger: CTGCCGCCGCTCCGTGGACCATCGCAAGTACCTGCA...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp AGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCCAGGAGCAGCCTCCTaGGCCGGTCCTCAGACCCCC +
Preference number: 4 (lower is better)
Translates to: SGWQVNRCVSLASGVTARPGAAS*AGPQTP
Trigger: GGGGGTCTGAGGACCGGCCCAGGAGGCTGCTCCTGG...CCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGCCAGGAGCAGCCTCCTaGGCCGGTCCTCAGACCCCC +
Preference number: 4 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWPGAAS*AGPQTP
Trigger: GGGGGTCTGAGGACCGGCCCAGGAGGCTGCTCCTGG...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCCAGGAGCAGCCTCCTaGGCCGGTCCTCAGACCCCC +
Preference number: 4 (lower is better)
Translates to: VSLASGVTARQGRATSQYPGAAS*AGPQTP
Trigger: GGGGGTCTGAGGACCGGCCCAGGAGGCTGCTCCTGG...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGAAGCGGGACAAGCTGCTaGGCCCTGGCCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGSGTSC*ALACLG
Trigger: CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCT...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGACATCCCAGTACCTATaGTCTGCACAGGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGTSQYL*SAQGQR
Trigger: CCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGT...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGGATTGGCTCGCAGAGTaGGTGGCAGGTAAACAGATG +
Preference number: 4 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGDWLAE*VAGKQM
Trigger: CATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACACAGGCCCCACCAACGTaGCCCGGCAGGTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: GKEGQHPSTYGLHRDSGTQAPPT*PGRFPT
Trigger: AGTGGGGAACCTGCCGGGCCACGTTGGTGGGGCCTG...TGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR CCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCCAGGCCCCACCAACGTaGCCCGGCAGGTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCQAPPT*PGRFPT
Trigger: AGTGGGGAACCTGCCGGGCCACGTTGGTGGGGCCTG...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR TCA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGCTTCCACCAAACACTTaGCTGTGTCCTCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGLPPNT*LCPPVL
Trigger: CAGTACTGGAGGACACAGTCAAGTGTTTGGTGGAAG...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp AGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGGGAGCGGCGGCAGGGTaGGGACTTATCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGWQVNRCVSLASGVTARGAAAG*GLIQGC
Trigger: GCAGCCCTGGATAAGTCCGCACCCTGCCGCCGCTCC...CCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCAGGACTCTGAGGCAGTaGCCCCAGGGGGCCCGGATA +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCRTLRQ*PQGARI
Trigger: TATCCGGGCCCCCTGGGGGCACTGCCTCAGAGTCCT...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGGCCTGCACACCTTCTaGCCCAGGCCGTCCACATCC +
Preference number: 4 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGGLHTF*PRPSTS
Trigger: GGATGTGGACGGCCTGGGGCAGAAGGTGTGCAGGCC...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGGGACCTCGACACTCCTaGAGGCCAGAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLGPRHS*RPEVGA
Trigger: AGCCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCC...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCGGACCTCGACACTCCTaGAGGCCAGAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCGPRHS*RPEVGA
Trigger: AGCCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCC...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAGGACCTCGACACTCCTaGAGGCCAGAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GKEGQHPSTYGLHRDSGTGPRHS*RPEVGA
Trigger: AGCCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCC...TGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCTGCCCTCCACTCCCATaGGCACACAAACGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LPSTPMRTQTEEATLWPSCPPLP*AHKRKR
Trigger: CCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCA...GCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGGACAGCGGGACAAGCTaGTGGGCCCTGGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GDCKARKGNIPVPMVCTGDSGTS*WALACL
Trigger: CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTC...CCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGAGACAGCGGGACAAGCTaGTGGGCCCTGGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGDSGTS*WALACL
Trigger: CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTC...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGTGGCAGGTAAACAGATaGGTCTCTCTGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGWQVNR*VSLASG
Trigger: CCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCA...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCCACACTGACCGAAGGTaGGGCCCAGGCCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCHTDRR*GPGPTN
Trigger: GTTGGTGGGGCCTGGGCCGCACCTTCGGTCAGTGTG...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR GCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGGGGCTGATCTCAGGCTaGGGGCAGCAGGGATTCCCC +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLGLISG*GQQGFP
Trigger: GGGGAATCCCTGCTGCCCGCAGCCTGAGATCAGCCC...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR CCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGTCCCCACCAGGCCCGTaGACTCCGTGGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLSPPGP*TPWEVS
Trigger: ACTCACCTCCCACGGAGTCCACGGGCCTGGTGGGGA...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CCA 90 bp GGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACACACCTGCAGCCCTGCTaGCCCATTCTGCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: GKEGQHPSTYGLHRDSGTHLQPC*PILHCP
Trigger: CGGGCAGTGCAGAATGGGCCAGCAGGGCTGCAGGTG...TGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGGAGGGTAGGCTCTGCTaGTGGCCGGCAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLEGRLC*WPAAPR
Trigger: CCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTC...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCGAGGGTAGGCTCTGCTaGTGGCCGGCAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCEGRLC*WPAAPR
Trigger: CCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTC...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTCACCCCCGCCGGGGCTaGAATCAGGGCCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGHPRRG*NQGPNP
Trigger: TGGATTTGGGCCCTGATTCCAGCCCCGGCGGGGGTG...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCGGCTGTCCATGGTACTaGAAGGGGCAGCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: LPSTPMRTQTEEATLWPSGCPWY*KGQQLQ
Trigger: CTGGAGTTGCTGCCCCTTCCAGTACCATGGACAGCC...GCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGGGGTGGGGGCACGGCTaGCTTGGTGGGGATGGGTTT +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLGWGHG*LGGDGF
Trigger: AAACCCATCCCCACCAAGCCAGCCGTGCCCCCACCC...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAAGCGGGACAAGCTGCTaGGCCCTGGCCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSASGTSC*ALACLG
Trigger: CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCT...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGACATCCCAGTACCTATaGTCTGCACAGGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLTSQYL*SAQGQR
Trigger: CCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGT...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GAGATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGCTGACCTTGCGGGCTaGTCTCAGGCTGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: EIGSQSGWQVNRCVSLASADLAG*SQAAGS
Trigger: GCTGCCCGCAGCCTGAGATCAGCCCGCAAGGTCAGC...AGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR GCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGAGATCCCACGGCACCTaGAGCCCTGCTGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLRSHGT*SPAGPF
Trigger: GAATGGGCCAGCAGGGCTGCAGGTGCCGTGGGATCT...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGGGGGCTCCAAGCCCTTaGAATTTTTCTTACCCTCAT +
Preference number: 4 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGGAPSP*NFSYPH
Trigger: ATGAGGGTAAGAAAAATTGCAAGGGCTTGGAGCCCC...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
61% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGAGGACTCTGAGGCAGTaGCCCCAGGGGGCCCGGATA +
Preference number: 4 (lower is better)
Translates to: GDCKARKGNIPVPMVCTGRTLRQ*PQGARI
Trigger: TATCCGGGCCCCCTGGGGGCACTGCCTCAGAGTCCT...CCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGGGCCGTCCACATCCTTaGAGAGGTGCGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GDCKARKGNIPVPMVCTGGRPHP*RGAPAP
Trigger: GGGAGCTGGCGCACCTCTGCAAGGATGTGGACGGCC...CCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGGGCCGTCCACATCCTTaGAGAGGTGCGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LASGVTARQGRATSQYLWGRPHP*RGAPAP
Trigger: GGGAGCTGGCGCACCTCTGCAAGGATGTGGACGGCC...CCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACGGCCGTCCACATCCTTaGAGAGGTGCGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VSLASGVTARQGRATSQYGRPHP*RGAPAP
Trigger: GGGAGCTGGCGCACCTCTGCAAGGATGTGGACGGCC...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCATCAGCACCACGGGCCTaGACACCTTCTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPSAPRA*TPSAPG
Trigger: GCCTGGGGCAGAAGGTGTGCAGGCCCGTGGTGCTGA...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGTCAGCACCACGGGCCTaGACACCTTCTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWSAPRA*TPSAPG
Trigger: GCCTGGGGCAGAAGGTGTGCAGGCCCGTGGTGCTGA...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGACAGCGGGACAAGCTaGTGGGCCCTGGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SGFWGDCKARKGNIPVPMDSGTS*WALACL
Trigger: CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTC...CATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCACACACTGACCGAAGGTaGGGCCCAGGCCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPHTDRR*GPGPTN
Trigger: GTTGGTGGGGCCTGGGCCGCACCTTCGGTCAGTGTG...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR GCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCTCTGCAGCAATTTCATaGCTCCTCGGCCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLSAAIS*LLGRHP
Trigger: TGGGTGGCGGCCGAGGAGGCATGAAATTGCTGCAGA...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR CCA 90 bp CAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCTCCCCACCAGGCCCGTaGACTCCGTGGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: QMRLSGFWGDCKARKGNISPPGP*TPWEVS
Trigger: ACTCACCTCCCACGGAGTCCACGGGCCTGGTGGGGA...GATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CCA 90 bp CAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCACCTGCAGCCCTGCTaGCCCATTCTGCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: QMRLSGFWGDCKARKGNIHLQPC*PILHCP
Trigger: CGGGCAGTGCAGAATGGGCCAGCAGGGCTGCAGGTG...GATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CCA 90 bp CTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGGGCACCTGGCCAGGCTaGGCAGCTTCTGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: LASGVTARQGRATSQYLWGTWPG*AASGCC
Trigger: GCAGCATCCAGAAGCTGCCCAGCCTGGCCAGGTGCC...CCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACGGCACCTGGCCAGGCTaGGCAGCTTCTGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: VSLASGVTARQGRATSQYGTWPG*AASGCC
Trigger: GCAGCATCCAGAAGCTGCCCAGCCTGGCCAGGTGCC...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCCATGGTAGCTGTGGGTaGGCCTTGGCTCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLHGSCG*ALALPR
Trigger: TCTGGGAAGAGCCAAGGCCCACCCACAGCTACCATG...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGGGGCACGGCTGGCTTaGTGGGGATGGGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGGARLA*WGWVSA
Trigger: TGCTGAAACCCATCCCCACCAAGCCAGCCGTGCCCC...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp AGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGGGGTGGGGGCACGGCTaGCTTGGTGGGGATGGGTTT +
Preference number: 4 (lower is better)
Translates to: SGWQVNRCVSLASGVTARGWGHG*LGGDGF
Trigger: AAACCCATCCCCACCAAGCCAGCCGTGCCCCCACCC...CCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCGACATTGAAGATGGGTaGGGGCACGGCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLDIEDG*GHGWLG
Trigger: ACCAAGCCAGCCGTGCCCCCACCCATCTTCAATGTC...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGGCACCAACCAGGAATaGAAAGTCTGTTTGATCTCA +
Preference number: 4 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGGTNQE*KVCLIS
Trigger: TGAGATCAAACAGACTTTTCATTCCTGGTTGGTGCC...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR TCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGCTTCCACCAAACACTTaGCTGTGTCCTCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLLPPNT*LCPPVL
Trigger: CAGTACTGGAGGACACAGTCAAGTGTTTGGTGGAAG...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR TCA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCTGCACTGCCCGCTCATaGAGCTGTCTCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LPSTPMRTQTEEATLWPSCTARS*SCLSFL
Trigger: AAGAAAGGAGAGACAGCTTCATGAGCGGGCAGTGCA...GCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR TCA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTAGCTCCCAGCTTCCTTaGGATCCCACGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGSSQLP*DPTAPA
Trigger: TGCAGGTGCCGTGGGATCTCAAGGAAGCTGGGAGCT...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR TCA 90 bp GGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACATATCCAGGGCTGCCTTaGTGTCGCTGGACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GKEGQHPSTYGLHRDSGTYPGLP*CRWTPG
Trigger: ACCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATA...TGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCTCTGGGAGAAGCGCTTaGGCTGCTTCTGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLSGRSA*AASAGT
Trigger: AGTACCTGCAGAAGCAGCTCAAGCGCTTCTCCCAGA...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCAACTCCAGGCATTaGCGCGGCCCACCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GKEGQHPSTYGLHRDSGTSNSRH*RGPPRR
Trigger: TCTCCTTGGTGGGCCGCGTCAATGCCTGGAGTTGCT...TGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAAGATCCCACGGCACCTaGAGCCCTGCTGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPRSHGT*SPAGPF
Trigger: GAATGGGCCAGCAGGGCTGCAGGTGCCGTGGGATCT...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCGGCACCGAGCTGACCTaGTTTGCTGTGCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCGTELT*FAVLAL
Trigger: AAGGGCGAGCACAGCAAAGCAGGTCAGCTCGGTGCC...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGAGAAGAGGGTAGGCTCTaGTGGTGGCCGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGEEGRL*WWPAAP
Trigger: TGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTC...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGGAAGAGGGTAGGCTCTaGTGGTGGCCGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GDCKARKGNIPVPMVCTGEEGRL*WWPAAP
Trigger: TGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTC...CCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCGCTTCTGCAGGTACTTaGGATGGTCCACGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCASAGT*DGPRSG
Trigger: GCCGCTCCGTGGACCATCGCAAGTACCTGCAGAAGC...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCATCAGCACCACGGGCCTaGACACCTTCTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSASAPRA*TPSAPG
Trigger: GCCTGGGGCAGAAGGTGTGCAGGCCCGTGGTGCTGA...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGATCAGCACCACGGGCCTaGACACCTTCTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VTARQGRATSQYLWSAQGSAPRA*TPSAPG
Trigger: GCCTGGGGCAGAAGGTGTGCAGGCCCGTGGTGCTGA...TCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCCCAGTACCTATGGTCTaGACAGGGACAGCGGGACAA +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLPVPMV*TGTAGQ
Trigger: TTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGG...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCTGGCAGGTAAACAGATaGGTCTCTCTGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPSTPMRTQTEEATLWPSWQVNR*VSLASG
Trigger: CCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCA...GCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGCCGTGGGAGGTGAGTTaGTGTCTTACGAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: YGLHRDSGTSCWALACLGPWEVS*CLTKVF
Trigger: AAAGACTTTCGTAAGACACCAACTCACCTCCCACGG...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGGGCCCGTGGACTCCGTaGGAGGTGAGTTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLGPWTP*EVSWCL
Trigger: AAGACACCAACTCACCTCCCACGGAGTCCACGGGCC...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAGAGGGTAGGCTCTGCTaGTGGCCGGCAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSAEGRLC*WPAAPR
Trigger: CCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTC...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGATGCAGGTACTTGCGATaGTCCACGGAGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGCRYLR*STERRQ
Trigger: CTGCCGCCGCTCCGTGGACCATCGCAAGTACCTGCA...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACACCCCCGCCGGGGCTaGAATCAGGGCCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: VTARQGRATSQYLWSAQGHPRRG*NQGPNP
Trigger: TGGATTTGGGCCCTGATTCCAGCCCCGGCGGGGGTG...TCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGCACCCCCGCCGGGGCTaGAATCAGGGCCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: SGFWGDCKARKGNIPVPMHPRRG*NQGPNP
Trigger: TGGATTTGGGCCCTGATTCCAGCCCCGGCGGGGGTG...CATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCGCTGTCTTTTCCTCATaGGCACCTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCAVFSS*APGQAG
Trigger: CCCAGCCTGGCCAGGTGCCCATGAGGAAAAGACAGC...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGGGGGCCCGGATAGATaGGCTGTCCATGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGGGPDR*AVHGTG
Trigger: TCCAGTACCATGGACAGCCCATCTATCCGGGCCCCC...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp AGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCTCCCCGGGAAAGGCTaGGCTCTTCCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGWQVNRCVSLASGVTARLPGKG*ALPPKA
Trigger: GGCCTTTGGAGGAAGAGCCCAGCCTTTCCCGGGGAG...CCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGCTCCCCGGGAAAGGCTaGGCTCTTCCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWLPGKG*ALPPKA
Trigger: GGCCTTTGGAGGAAGAGCCCAGCCTTTCCCGGGGAG...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCTGGCTTGGTGGGGATaGGTTTCAGCACCACGGGCC +
Preference number: 4 (lower is better)
Translates to: QMRLSGFWGDCKARKGNILAWWG*VSAPRA
Trigger: GGCCCGTGGTGCTGAAACCCATCCCCACCAAGCCAG...GATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACTGGCTTGGTGGGGATaGGTTTCAGCACCACGGGCC +
Preference number: 4 (lower is better)
Translates to: RLSGFWGDCKARKGNIPVLAWWG*VSAPRA
Trigger: GGCCCGTGGTGCTGAAACCCATCCCCACCAAGCCAG...TACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGAGGGGCACGGCTGGCTTaGTGGGGATGGGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGGARLA*WGWVSA
Trigger: TGCTGAAACCCATCCCCACCAAGCCAGCCGTGCCCC...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGGGCACGGCTGGCTTaGTGGGGATGGGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWGARLA*WGWVSA
Trigger: TGCTGAAACCCATCCCCACCAAGCCAGCCGTGCCCC...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGGGTGGGGGCACGGCTaGCTTGGTGGGGATGGGTTT +
Preference number: 4 (lower is better)
Translates to: SGFWGDCKARKGNIPVPMGWGHG*LGGDGF
Trigger: AAACCCATCCCCACCAAGCCAGCCGTGCCCCCACCC...CATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCGAGGCCCTCTCCGCGTaGCTAGAGGTAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCEALSA*LEVAKD
Trigger: GTCTTTGGCTACCTCTAGCCACGCGGAGAGGGCCTC...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACTATCCAGGGCTGCCTTaGTGTCGCTGGACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VSLASGVTARQGRATSQYYPGLP*CRWTPG
Trigger: ACCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATA...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCATATCCAGGGCTGCCTTaGTGTCGCTGGACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPYPGLP*CRWTPG
Trigger: ACCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATA...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAAGCAACTCCAGGCATTaGCGCGGCCCACCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPSNSRH*RGPPRR
Trigger: TCTCCTTGGTGGGCCGCGTCAATGCCTGGAGTTGCT...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGGTAGCCAAAGACATTaGAGATGGGTGGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGGSQRH*RWVGAR
Trigger: CCGTGCCCCCACCCATCTTCAATGTCTTTGGCTACC...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAGGAAGGGCACCGAGCTaGCCTTGCGGGCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSAGRAPS*PCGLIS
Trigger: TGAGATCAGCCCGCAAGGTCAGCTCGGTGCCCTTCC...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR GCA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGGGCACCGAGCTGACCTaGTTTGCTGTGCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: GDCKARKGNIPVPMVCTGGTELT*FAVLAL
Trigger: AAGGGCGAGCACAGCAAAGCAGGTCAGCTCGGTGCC...CCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp GAGATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGAAGAGGGTAGGCTCTaGTGGTGGCCGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: EIGSQSGWQVNRCVSLASEEGRL*WWPAAP
Trigger: TGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTC...AGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTCACCAGGGGGCCACTaGACGAGGCTTTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCSPGGH*TRLSMK
Trigger: CTTCATGGAAAGCCTCGTGCAGTGGCCCCCTGGTGA...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGGCTTCTGCAGGTACTTaGGATGGTCCACGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GDCKARKGNIPVPMVCTGASAGT*DGPRSG
Trigger: GCCGCTCCGTGGACCATCGCAAGTACCTGCAGAAGC...CCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGCAGCTTCTGGATGCTaGCTCTGTGGGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPAASGC*LCGSCS
Trigger: GGAGCAGCTCCCACAGAGGCAGCATCCAGAAGCTGC...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGAGCAGCTTCTGGATGCTaGCTCTGTGGGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGAASGC*LCGSCS
Trigger: GGAGCAGCTCCCACAGAGGCAGCATCCAGAAGCTGC...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGGCTCCAAGCCCTTaGAATTTTTCTTACCCTCAT +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLGAPSP*NFSYPH
Trigger: ATGAGGGTAAGAAAAATTGCAAGGGCTTGGAGCCCC...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTTGCCCTCCACTCCCATaGGCACACAAACGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGCPPLP*AHKRKR
Trigger: CCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCA...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCCCCGAAGAAGCATCTaGAGCAATTTCATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPSTPMRTQTEEATLWPSPRRSI*SNFMPP
Trigger: AGGAGGCATGAAATTGCTGCAGATGCTTCTTCGGGG...GCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR CCA 90 bp ACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGCCGTGGGAGGTGAGTTaGTGTCTTACGAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: TYGLHRDSGTSCWALACLPWEVS*CLTKVF
Trigger: AAAGACTTTCGTAAGACACCAACTCACCTCCCACGG...CAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CCA 90 bp AGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGGCTGTCTTTTCCTCATaGGCACCTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SGWQVNRCVSLASGVTARAVFSS*APGQAG
Trigger: CCCAGCCTGGCCAGGTGCCCATGAGGAAAAGACAGC...CCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGGGGGGCCCGGATAGATaGGCTGTCCATGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: LASGVTARQGRATSQYLWGGPDR*AVHGTG
Trigger: TCCAGTACCATGGACAGCCCATCTATCCGGGCCCCC...CCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp AGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGGGGGGCCCGGATAGATaGGCTGTCCATGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: SGWQVNRCVSLASGVTARGGPDR*AVHGTG
Trigger: TCCAGTACCATGGACAGCCCATCTATCCGGGCCCCC...CCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACGGGGGCCCGGATAGATaGGCTGTCCATGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: VSLASGVTARQGRATSQYGGPDR*AVHGTG
Trigger: TCCAGTACCATGGACAGCCCATCTATCCGGGCCCCC...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACTGGCTTGGTGGGGATaGGTTTCAGCACCACGGGCC +
Preference number: 4 (lower is better)
Translates to: VTARQGRATSQYLWSAQGLAWWG*VSAPRA
Trigger: GGCCCGTGGTGCTGAAACCCATCCCCACCAAGCCAG...TCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGCACGGCTGGCTTGGTaGGGATGGGTTTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWARLAW*GWVSAP
Trigger: TGGTGCTGAAACCCATCCCCACCAAGCCAGCCGTGC...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAGACATTGAAGATGGGTaGGGGCACGGCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GKEGQHPSTYGLHRDSGTDIEDG*GHGWLG
Trigger: ACCAAGCCAGCCGTGCCCCCACCCATCTTCAATGTC...TGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCGAGGCCCTCTCCGCGTaGCTAGAGGTAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QMRLSGFWGDCKARKGNIEALSA*LEVAKD
Trigger: GTCTTTGGCTACCTCTAGCCACGCGGAGAGGGCCTC...GATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGGAGGCCCTCTCCGCGTaGCTAGAGGTAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LASGVTARQGRATSQYLWEALSA*LEVAKD
Trigger: GTCTTTGGCTACCTCTAGCCACGCGGAGAGGGCCTC...CCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCGGACTCCGTGGGAGGTaGGTTGGTGTCTTACGAAAG +
Preference number: 4 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCGLRGR*VGVLRK
Trigger: CTTTCGTAAGACACCAACTCACCTCCCACGGAGTCC...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR TCA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGATCCCCAGGCCTTCTGTaGTTTGTGGGGGCTGCATCA +
Preference number: 4 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGSPGLL*FVGAAS
Trigger: TGATGCAGCCCCCACAAATCACAGAAGGCCTGGGGA...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR TCA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACTCCCCAGGCCTTCTGTaGTTTGTGGGGGCTGCATCA +
Preference number: 4 (lower is better)
Translates to: VSLASGVTARQGRATSQYSPGLL*FVGAAS
Trigger: TGATGCAGCCCCCACAAATCACAGAAGGCCTGGGGA...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR TCA 90 bp TCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGTATCCAGGGCTGCCTTaGTGTCGCTGGACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SGFWGDCKARKGNIPVPMYPGLP*CRWTPG
Trigger: ACCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATA...CATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAAGACCCCAGGCATCTTaGGCGGCTCCTTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPRPQAS*AAPFQP
Trigger: TGGCTGAAAAGGAGCCGCTCAAGATGCCTGGGGTCT...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp AGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGAGACCCCAGGCATCTTaGGCGGCTCCTTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SGWQVNRCVSLASGVTARRPQAS*AAPFQP
Trigger: TGGCTGAAAAGGAGCCGCTCAAGATGCCTGGGGTCT...CCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAAGCAACTCCAGGCATTaGCGCGGCCCACCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSASNSRH*RGPPRR
Trigger: TCTCCTTGGTGGGCCGCGTCAATGCCTGGAGTTGCT...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GAGATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTAGCAACTCCAGGCATTaGCGCGGCCCACCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: EIGSQSGWQVNRCVSLASSNSRH*RGPPRR
Trigger: TCTCCTTGGTGGGCCGCGTCAATGCCTGGAGTTGCT...AGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGAGGTAGCCAAAGACATTaGAGATGGGTGGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGGSQRH*RWVGAR
Trigger: CCGTGCCCCCACCCATCTTCAATGTCTTTGGCTACC...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACATGGCCCATTCTGCACTaGCCGCTCATGAAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GKEGQHPSTYGLHRDSGTWPILH*PLMKLS
Trigger: AGACAGCTTCATGAGCGGGCAGTGCAGAATGGGCCA...TGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACTCACCAGGGGGCCACTaGACGAGGCTTTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: VSLASGVTARQGRATSQYSPGGH*TRLSMK
Trigger: CTTCATGGAAAGCCTCGTGCAGTGGCCCCCTGGTGA...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCATCACCAGGGGGCCACTaGACGAGGCTTTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPSPGGH*TRLSMK
Trigger: CTTCATGGAAAGCCTCGTGCAGTGGCCCCCTGGTGA...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCACACATCACTGTCGGATaGCATCACCAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPHITVG*HHQGAT
Trigger: AGTGGCCCCCTGGTGATGGCATCCGACAGTGATGTG...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGGGACTTATCCAGGGCTaGCTTGATGTCGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: LASGVTARQGRATSQYLWGLIQG*LDVAGR
Trigger: GCGTCCAGCGACATCAAGGCAGCCCTGGATAAGTCC...CCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTATGCCCTCCACTCCCATaGGCACACAAACGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RLSGFWGDCKARKGNIPVCPPLP*AHKRKR
Trigger: CCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCA...TACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCCAGTACCTATGGTCTaGACAGGGACAGCGGGACAA +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLPVPMV*TGTAGQ
Trigger: TTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGG...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCGGCTTCTGGGGTGACTaGAAGGCAAGGAAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: QMRLSGFWGDCKARKGNIGFWGD*KARKGN
Trigger: GTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCC...GATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCCCCCGAAGAAGCATCTaGAGCAATTTCATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLPRRSI*SNFMPP
Trigger: AGGAGGCATGAAATTGCTGCAGATGCTTCTTCGGGG...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR CCA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTAGCCGGGAATACTTCTaGGAGAAGCGCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGSREYF*EKRLSC
Trigger: GCAGCTCAAGCGCTTCTCCCAGAAGTATTCCCGGCT...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCCGGGAATACTTCTaGGAGAAGCGCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GKEGQHPSTYGLHRDSGTSREYF*EKRLSC
Trigger: GCAGCTCAAGCGCTTCTCCCAGAAGTATTCCCGGCT...TGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCATGGTAGCTGTGGGTaGGCCTTGGCTCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QMRLSGFWGDCKARKGNIHGSCG*ALALPR
Trigger: TCTGGGAAGAGCCAAGGCCCACCCACAGCTACCATG...GATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCACATGGTAGCTGTGGGTaGGCCTTGGCTCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPHGSCG*ALALPR
Trigger: TCTGGGAAGAGCCAAGGCCCACCCACAGCTACCATG...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp AGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGGGCTGTCCATGGTACTaGAAGGGGCAGCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: SGWQVNRCVSLASGVTARGCPWY*KGQQLQ
Trigger: CTGGAGTTGCTGCCCCTTCCAGTACCATGGACAGCC...CCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGCTGTCCATGGTACTaGAAGGGGCAGCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWGCPWY*KGQQLQ
Trigger: CTGGAGTTGCTGCCCCTTCCAGTACCATGGACAGCC...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAGAGGCCCTCTCCGCGTaGCTAGAGGTAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSAEALSA*LEVAKD
Trigger: GTCTTTGGCTACCTCTAGCCACGCGGAGAGGGCCTC...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAACATCCCAGTACCTATaGTCTGCACAGGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: GKEGQHPSTYGLHRDSGTTSQYL*SAQGQR
Trigger: CCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGT...TGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp CTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGGGCTCGCAGAGTGGGTaGCAGGTAAACAGATGCGTC +
Preference number: 4 (lower is better)
Translates to: LASGVTARQGRATSQYLWGSQSG*QVNRCV
Trigger: GACGCATCTGTTTACCTGCCACCCACTCTGCGAGCC...CCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGGGCTCGCAGAGTGGGTaGCAGGTAAACAGATGCGTC +
Preference number: 4 (lower is better)
Translates to: GDCKARKGNIPVPMVCTGGSQSG*QVNRCV
Trigger: GACGCATCTGTTTACCTGCCACCCACTCTGCGAGCC...CCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCATCTGGGAGAAGCGCTTaGGCTGCTTCTGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPSGRSA*AASAGT
Trigger: AGTACCTGCAGAAGCAGCTCAAGCGCTTCTCCCAGA...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp GAGATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTAGACCCCAGGCATCTTaGGCGGCTCCTTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: EIGSQSGWQVNRCVSLASRPQAS*AAPFQP
Trigger: TGGCTGAAAAGGAGCCGCTCAAGATGCCTGGGGTCT...AGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAGGTAGCCAAAGACATTaGAGATGGGTGGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSAGSQRH*RWVGAR
Trigger: CCGTGCCCCCACCCATCTTCAATGTCTTTGGCTACC...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACGAGCTGACCTGCTTTaGTGTGCTCGCCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RLSGFWGDCKARKGNIPVRADLL*CARPFL
Trigger: GAGAAAAGGGCGAGCACAGCAAAGCAGGTCAGCTCG...TACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACACATCACTGTCGGATaGCATCACCAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSAHITVG*HHQGAT
Trigger: AGTGGCCCCCTGGTGATGGCATCCGACAGTGATGTG...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GAGATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGACTTATCCAGGGCTaGCTTGATGTCGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: EIGSQSGWQVNRCVSLASGLIQG*LDVAGR
Trigger: GCGTCCAGCGACATCAAGGCAGCCCTGGATAAGTCC...AGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGGACTTATCCAGGGCTaGCTTGATGTCGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: SGFWGDCKARKGNIPVPMGLIQG*LDVAGR
Trigger: GCGTCCAGCGACATCAAGGCAGCCCTGGATAAGTCC...CATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp AGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCCAGTACCTATGGTCTaGACAGGGACAGCGGGACAA +
Preference number: 4 (lower is better)
Translates to: SGWQVNRCVSLASGVTARPVPMV*TGTAGQ
Trigger: TTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGG...CCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GAGATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGCTTCTGGGGTGACTaGAAGGCAAGGAAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: EIGSQSGWQVNRCVSLASGFWGD*KARKGN
Trigger: GTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCC...AGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGTGGCAGGTAAACAGATaGGTCTCTCTGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLWQVNR*VSLASG
Trigger: CCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCA...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCATCTGCAGCAATTTCATaGCTCCTCGGCCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSASAAIS*LLGRHP
Trigger: TGGGTGGCGGCCGAGGAGGCATGAAATTGCTGCAGA...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR CCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAGACATTGAAGATGGGTaGGGGCACGGCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSADIEDG*GHGWLG
Trigger: ACCAAGCCAGCCGTGCCCCCACCCATCTTCAATGTC...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGACATTGAAGATGGGTaGGGGCACGGCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SGFWGDCKARKGNIPVPMDIEDG*GHGWLG
Trigger: ACCAAGCCAGCCGTGCCCCCACCCATCTTCAATGTC...CATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAACATCCCAGTACCTATaGTCTGCACAGGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPTSQYL*SAQGQR
Trigger: CCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGT...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGGCTCGCAGAGTGGGTaGCAGGTAAACAGATGCGTC +
Preference number: 4 (lower is better)
Translates to: SGFWGDCKARKGNIPVPMGSQSG*QVNRCV
Trigger: GACGCATCTGTTTACCTGCCACCCACTCTGCGAGCC...CATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGGATTGGCTCGCAGAGTaGGTGGCAGGTAAACAGATG +
Preference number: 4 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLDWLAE*VAGKQM
Trigger: CATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCATGGCCCATTCTGCACTaGCCGCTCATGAAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSAWPILH*PLMKLS
Trigger: AGACAGCTTCATGAGCGGGCAGTGCAGAATGGGCCA...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp GAGATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTCGAGCTGACCTGCTTTaGTGTGCTCGCCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: EIGSQSGWQVNRCVSLASRADLL*CARPFL
Trigger: GAGAAAAGGGCGAGCACAGCAAAGCAGGTCAGCTCG...AGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCATGCCTCTGTGGGAGCTaGTCCTTAGCAAGACATTCC +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPCLCGS*SLARHS
Trigger: GGAATGTCTTGCTAAGGAGCAGCTCCCACAGAGGCA...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGTGCCTCTGTGGGAGCTaGTCCTTAGCAAGACATTCC +
Preference number: 4 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWCLCGS*SLARHS
Trigger: GGAATGTCTTGCTAAGGAGCAGCTCCCACAGAGGCA...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTGCCTCTGTGGGAGCTaGTCCTTAGCAAGACATTCC +
Preference number: 4 (lower is better)
Translates to: LASGVTARQGRATSQYLWCLCGS*SLARHS
Trigger: GGAATGTCTTGCTAAGGAGCAGCTCCCACAGAGGCA...CCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAAGCCGGGAATACTTCTaGGAGAAGCGCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSASREYF*EKRLSC
Trigger: GCAGCTCAAGCGCTTCTCCCAGAAGTATTCCCGGCT...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGATTGGCTCGCAGAGTaGGTGGCAGGTAAACAGATG +
Preference number: 4 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWDWLAE*VAGKQM
Trigger: CATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTGATTTGTGGGGGCTaGATCATTCCTCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPVICGG*IIPLSR
Trigger: TCTGGAGAGAGGAATGATGCAGCCCCCACAAATCAC...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp TCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGTGCCTCTGTGGGAGCTaGTCCTTAGCAAGACATTCC +
Preference number: 4 (lower is better)
Translates to: SGFWGDCKARKGNIPVPMCLCGS*SLARHS
Trigger: GGAATGTCTTGCTAAGGAGCAGCTCCCACAGAGGCA...CATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp GAGATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTTGGCAGGTAAACAGATaGGTCTCTCTGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EIGSQSGWQVNRCVSLASWQVNR*VSLASG
Trigger: CCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCA...AGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAGATTGGCTCGCAGAGTaGGTGGCAGGTAAACAGATG +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSADWLAE*VAGKQM
Trigger: CATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR GCA 90 bp CAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCGGGGCTCCAAGCCCTTaGAATTTTTCTTACCCTCAT +
Preference number: 4 (lower is better)
Translates to: QMRLSGFWGDCKARKGNIGAPSP*NFSYPH
Trigger: ATGAGGGTAAGAAAAATTGCAAGGGCTTGGAGCCCC...GATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR TCA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGAGGCACCAACCAGGAATaGAAAGTCTGTTTGATCTCA +
Preference number: 4 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGGTNQE*KVCLIS
Trigger: TGAGATCAAACAGACTTTTCATTCCTGGTTGGTGCC...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR GCA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAGGGGCTCCAAGCCCTTaGAATTTTTCTTACCCTCAT +
Preference number: 4 (lower is better)
Translates to: SGVTARQGRATSQYLWSAGAPSP*NFSYPH
Trigger: ATGAGGGTAAGAAAAATTGCAAGGGCTTGGAGCCCC...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CCA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGCCAAAGCTCTTAATGTaGGCTGTTCTTCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWPKLLM*AVLPPN
Trigger: GTTTGGTGGAAGAACAGCCCACATTAAGAGCTTTGG...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CCA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGCCAAAGCTCTTAATGTaGGCTGTTCTTCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: GDCKARKGNIPVPMVCTGPKLLM*AVLPPN
Trigger: GTTTGGTGGAAGAACAGCCCACATTAAGAGCTTTGG...CCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CAA 90 bp CCTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGAGGCCGTCCACATCCTaGCAGAGGTGCGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PHRRAPRGPRHSCRPEVGRPSTS*QRCASS
Trigger: GGAGCTGGCGCACCTCTGCAAGGATGTGGACGGCCT...CCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS GCA 90 bp GGCTTGGTGGGGATGGGTTTCAGCACCACGGGCCTGCACACCTTCTaGCCCAGGCCGTCCACATCCTTGCAGAGGTGCGCCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: GLVGMGFSTTGLHTF*PRPSTSLQRCASSP
Trigger: CGGGGAGCTGGCGCACCTCTGCAAGGATGTGGACGGCCTGGGGCAGAAGGTGTGCAGGCCCGTGGTGCTGAAACCCATCCCCACCAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000267594.5
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
CDS-3UTR CAA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGGGCACCGAGCTGACCTaGCGGGCTGATCTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: YGLHRDSGTSCWALACLGGTELT*RADLRL
Trigger: CAGCCTGAGATCAGCCCGCAAGGTCAGCTCGGTGCC...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR CAA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGCAGCAACTCCAGGCATaGACGCGGCCCACCAAGGAG +
Preference number: 5 (lower is better)
Translates to: YGLHRDSGTSCWALACLGQQLQA*TRPTKE
Trigger: CTCCTTGGTGGGCCGCGTCAATGCCTGGAGTTGCTG...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS GCA 90 bp ACCAGGGGGCCACTGCACGAGGCTTTCCATGAAGAGGGTAGGCTCTaGTGGTGGCCGGCAGCTCCAAGGAAGGGCACCGAGCTGACCTGC +
Preference number: 5 (lower is better)
Translates to: TRGPLHEAFHEEGRL*WWPAAPRKGTELTC
Trigger: GCAGGTCAGCTCGGTGCCCTTCCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAGTGGCCCCCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS GCA 90 bp ACCAGGGGGCCACTGCACGAGGCTTTCCATGAAGAGGGTAGGCTCTaGTGGTGGCCGGCAGCTCCAAGGAAGGGCACCGAGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: TRGPLHEAFHEEGRL*WWPAAPRKGTELTW
Trigger: CCAGGTCAGCTCGGTGCCCTTCCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAGTGGCCCCCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554404.1
ENST00000629121.1
CDS CCA 90 bp AGGGGGCCACTGCACGAGGCTTTCCATGAAGAGGGTAGGCTCTGCTaGTGGCCGGCAGCTCCAAGGAAGGGCACCGAGCTGACCTTGCGG +
Preference number: 5 (lower is better)
Translates to: RGPLHEAFHEEGRLC*WPAAPRKGTELTLR
Trigger: CCGCAAGGTCAGCTCGGTGCCCTTCCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAGTGGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS GCA 90 bp CTGATCTCAGGCTGCGGGCAGCAGGGATTCCCCCGAAGAAGCATCTaGAGCAATTTCATGCCTCCTCGGCCGCCACCCACGGCACCTCGC +
Preference number: 5 (lower is better)
Translates to: LISGCGQQGFPRRSI*SNFMPPRPPPTAPR
Trigger: GCGAGGTGCCGTGGGTGGCGGCCGAGGAGGCATGAAATTGCTGCAGATGCTTCTTCGGGGGAATCCCTGCTGCCCGCAGCCTGAGATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS GCA 90 bp ACCAGGGGGCCACTGCACGAGGCTTTCCATGAAGAGGGTAGGCTCTaGTGGTGGCCGGCAGCTCCAAGGAAGGGCACCGAGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: TRGPLHEAFHEEGRL*WWPAAPRKGTELTL
Trigger: CAAGGTCAGCTCGGTGCCCTTCCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAGTGGCCCCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000620448.3
CDS GCA 90 bp ACCAGGGGGCCACTGCACGAGGCTTTCCATGAAGAGGGTAGGCTCTaGTGGTGGCCGGCAGCTCCAAGGAAGGGCACCGAGCTGACCGAA +
Preference number: 5 (lower is better)
Translates to: TRGPLHEAFHEEGRL*WWPAAPRKGTELTE
Trigger: TTCGGTCAGCTCGGTGCCCTTCCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAGTGGCCCCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556222.1
ENST00000626058.1
CDS CCA 90 bp AGGGGGCCACTGCACGAGGCTTTCCATGAAGAGGGTAGGCTCTGCTaGTGGCCGGCAGCTCCAAGGAAGGGCACCGAGCTGACCGAAGGT +
Preference number: 5 (lower is better)
Translates to: RGPLHEAFHEEGRLC*WPAAPRKGTELTEG
Trigger: ACCTTCGGTCAGCTCGGTGCCCTTCCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAGTGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556222.1
ENST00000626058.1
CDS-3UTR CAA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCTCAGCACCTTCTCCTaGCAGCCCCCACCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLLSTFS*QPPPPP
Trigger: CGGCGGGGGTGGGGGCTGCAAGGAGAAGGTGCTGAG...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTCTCAGCACCTTCTCCTaGCAGCCCCCACCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGLSTFS*QPPPPP
Trigger: CGGCGGGGGTGGGGGCTGCAAGGAGAAGGTGCTGAG...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS GCA 90 bp GCGATGGTCCACGGAGCGGCGGCAGGGTGCGGACTTATCCAGGGCTaGCTTGATGTCGCTGGACGCCAGGTTCACGAAGTTCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: AMVHGAAAGCGLIQG*LDVAGRQVHEVQQH
Trigger: ATGCTGCTGAACTTCGTGAACCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATAAGTCCGCACCCTGCCGCCGCTCCGTGGACCATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS CCA 90 bp AGGGGGCCACTGCACGAGGCTTTCCATGAAGAGGGTAGGCTCTGCTaGTGGCCGGCAGCTCCAAGGAAGGGCACCGAGCTGACCTGCTTT +
Preference number: 5 (lower is better)
Translates to: RGPLHEAFHEEGRLC*WPAAPRKGTELTCF
Trigger: AAAGCAGGTCAGCTCGGTGCCCTTCCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAGTGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS CCA 90 bp GCCCTCTCCGCGTGGCTAGAGGTAGCCAAAGACATTGAAGATGGGTaGGGGCACGGCTGGCTTGGTGGGGATGGGTTTCAGCACCACGGG +
Preference number: 5 (lower is better)
Translates to: ALSAWLEVAKDIEDG*GHGWLGGDGFQHHG
Trigger: CCCGTGGTGCTGAAACCCATCCCCACCAAGCCAGCCGTGCCCCCACCCATCTTCAATGTCTTTGGCTACCTCTAGCCACGCGGAGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS CCA 90 bp AGGGGGCCACTGCACGAGGCTTTCCATGAAGAGGGTAGGCTCTGCTaGTGGCCGGCAGCTCCAAGGAAGGGCACCGAGCTGACCTTGACT +
Preference number: 5 (lower is better)
Translates to: RGPLHEAFHEEGRLC*WPAAPRKGTELTLT
Trigger: AGTCAAGGTCAGCTCGGTGCCCTTCCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAGTGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557719.1
ENST00000620448.3
CDS-3UTR CAA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCTTATCCAGGGCTGCCTaGATGTCGCTGGACGCCAGG +
Preference number: 5 (lower is better)
Translates to: LPSTPMRTQTEEATLWPSLSRAA*MSLDAR
Trigger: CCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATAA...GCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp CAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCTCAGCACCTTCTCCTaGCAGCCCCCACCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: QMRLSGFWGDCKARKGNILSTFS*QPPPPP
Trigger: CGGCGGGGGTGGGGGCTGCAAGGAGAAGGTGCTGAG...GATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp GGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGCTCAGCACCTTCTCCTaGCAGCCCCCACCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: GDCKARKGNIPVPMVCTGLSTFS*QPPPPP
Trigger: CGGCGGGGGTGGGGGCTGCAAGGAGAAGGTGCTGAG...CCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS TCA 90 bp GGTCCACGGAGCGGCGGCAGGGTGCGGACTTATCCAGGGCTGCCTTaGTGTCGCTGGACGCCAGGTTCACGAAGTTCAGCAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: GPRSGGRVRTYPGLP*CRWTPGSRSSAASS
Trigger: TGAAGATGCTGCTGAACTTCGTGAACCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATAAGTCCGCACCCTGCCGCCGCTCCGTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS-3UTR CAA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCTTATCCAGGGCTGCCTaGATGTCGCTGGACGCCAGG +
Preference number: 5 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLLSRAA*MSLDAR
Trigger: CCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATAA...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGAGGGGCTCCAAGCCCTaGCAATTTTTCTTACCCTCA +
Preference number: 5 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGRGSKP*QFFLPS
Trigger: TGAGGGTAAGAAAAATTGCAAGGGCTTGGAGCCCCT...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp ACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCCACCTCCTCGAGACCCCAGGCATCTaGAGCGGCTCCTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: TPMRTQTEEATLWPSHLLETPGI*SGSFSA
Trigger: GGCTGAAAAGGAGCCGCTCAAGATGCCTGGGGTCTC...GAGGAGGTGGCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTAGGCCGTCCACATCCTaGCAGAGGTGCGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGRPSTS*QRCASS
Trigger: GGAGCTGGCGCACCTCTGCAAGGATGTGGACGGCCT...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS GCA 90 bp AGCTCAGCTCCCAGCTTCCTTGAGATCCCACGGCACCTGCAGCCCTaGTGGCCCATTCTGCACTGCCCGCTCATGAAGCTGTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: SSAPSFLEIPRHLQP*WPILHCPLMKLSLL
Trigger: AAGGAGAGACAGCTTCATGAGCGGGCAGTGCAGAATGGGCCAGCAGGGCTGCAGGTGCCGTGGGATCTCAAGGAAGCTGGGAGCTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CAA 90 bp CTCACAGGAGAGCGCCTCGGGGACCTCGACACTCCTGCAGGCCAGAGGTGGGGGTCTTCCACCAAACACTaGACTGTGTCCTCCAGTACT +
Preference number: 5 (lower is better)
Translates to: LTGERLGDLDTPAGQRWGSSTKH*TVSSST
Trigger: AGTACTGGAGGACACAGTCAAGTGTTTGGTGGAAGA...CCCCCACCTCTGGCCTGCAGGAGTGTCGAGGTCCCCGAGGCGCTCTCCTGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CAA 90 bp CTGCCCTCCACTCCCATGCGCACACAAACGGAAGAGGCCACACTGTGGCCCAGCTTCTGGGAGAAGCGCTaGAGCTGCTTCTGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LPSTPMRTQTEEATLWPSFWEKR*SCFCRY
Trigger: GTACCTGCAGAAGCAGCTCAAGCGCTTCTCCCAGAA...GCTGGGCCACAGTGTGGCCTCTTCCGTTTGTGTGCGCATGGGAGTGGAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTCAGCAACTCCAGGCATaGACGCGGCCCACCAAGGAG +
Preference number: 5 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGQQLQA*TRPTKE
Trigger: CTCCTTGGTGGGCCGCGTCAATGCCTGGAGTTGCTG...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACAGGCCGTCCACATCCTaGCAGAGGTGCGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VSLASGVTARQGRATSQYRPSTS*QRCASS
Trigger: GGAGCTGGCGCACCTCTGCAAGGATGTGGACGGCCT...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGAAGGCCGTCCACATCCTaGCAGAGGTGCGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGRPSTS*QRCASS
Trigger: GGAGCTGGCGCACCTCTGCAAGGATGTGGACGGCCT...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS CCA 90 bp TCAGCTCCCAGCTTCCTTGAGATCCCACGGCACCTGCAGCCCTGCTaGCCCATTCTGCACTGCCCGCTCATGAAGCTGTCTCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SAPSFLEIPRHLQPC*PILHCPLMKLSLLS
Trigger: AGAAAGGAGAGACAGCTTCATGAGCGGGCAGTGCAGAATGGGCCAGCAGGGCTGCAGGTGCCGTGGGATCTCAAGGAAGCTGGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS CCA 90 bp TGGCTAGAGGTAGCCAAAGACATTGAAGATGGGTGGGGGCACGGCTaGCTTGGTGGGGATGGGTTTCAGCACCACGGGCCTGCACACCTT +
Preference number: 5 (lower is better)
Translates to: WLEVAKDIEDGWGHG*LGGDGFQHHGPAHL
Trigger: AAGGTGTGCAGGCCCGTGGTGCTGAAACCCATCCCCACCAAGCCAGCCGTGCCCCCACCCATCTTCAATGTCTTTGGCTACCTCTAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
CDS-3UTR CAA 90 bp TATGGTCTGCACAGGGACAGCGGGACAAGCTGCTGGGCCCTGGCCTGCCTGGGGTCTTCCACCAAACACTaGACTGTGTCCTCCAGTACT +
Preference number: 5 (lower is better)
Translates to: YGLHRDSGTSCWALACLGSSTKH*TVSSST
Trigger: AGTACTGGAGGACACAGTCAAGTGTTTGGTGGAAGA...CCCCAGGCAGGCCAGGGCCCAGCAGCTTGTCCCGCTGTCCCTGTGCAGACCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CAA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCACAGCTCCCAGCTTCCTaGAGATCCCACGGCACCTGC +
Preference number: 5 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPQLPAS*RSHGTC
Trigger: GCAGGTGCCGTGGGATCTCAAGGAAGCTGGGAGCTG...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CAA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGGAGACCCCAGGCATCTaGAGCGGCTCCTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLETPGI*SGSFSA
Trigger: GGCTGAAAAGGAGCCGCTCAAGATGCCTGGGGTCTC...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp CGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACAGCAACTCCAGGCATaGACGCGGCCCACCAAGGAG +
Preference number: 5 (lower is better)
Translates to: RLSGFWGDCKARKGNIPVQQLQA*TRPTKE
Trigger: CTCCTTGGTGGGCCGCGTCAATGCCTGGAGTTGCTG...TACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCAGGCACCGAGCTGACCTaGCGGGCTGATCTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SGVTARQGRATSQYLWSAGTELT*RADLRL
Trigger: CAGCCTGAGATCAGCCCGCAAGGTCAGCTCGGTGCC...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS-3UTR CAA 90 bp GATTGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGTTATCCAGGGCTGCCTaGATGTCGCTGGACGCCAGG +
Preference number: 5 (lower is better)
Translates to: DWLAEWVAGKQMRLSGFWLSRAA*MSLDAR
Trigger: CCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATAA...CCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGAGAGACCCCAGGCATCTaGAGCGGCTCCTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGETPGI*SGSFSA
Trigger: GGCTGAAAAGGAGCCGCTCAAGATGCCTGGGGTCTC...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp CAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCGAGACCCCAGGCATCTaGAGCGGCTCCTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: QMRLSGFWGDCKARKGNIETPGI*SGSFSA
Trigger: GGCTGAAAAGGAGCCGCTCAAGATGCCTGGGGTCTC...GATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp GAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGCGAACAACAACTGAGATaGGCTCGCAGAGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: EGQHPSTYGLHRDSGTSCEQQLR*ARRVGG
Trigger: GCCACCCACTCTGCGAGCCAATCTCAGTTGTTGTTC...GCAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp CAGATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCAGGCCTTCTGTGATTaGTGGGGGCTGCATCATTCC +
Preference number: 5 (lower is better)
Translates to: QMRLSGFWGDCKARKGNIQAFCD*WGLHHS
Trigger: GGAATGATGCAGCCCCCACAAATCACAGAAGGCCTG...GATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CAA 90 bp ATGCGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCACAGGCCTTCTGTGATTaGTGGGGGCTGCATCATTCC +
Preference number: 5 (lower is better)
Translates to: MRLSGFWGDCKARKGNIPQAFCD*WGLHHS
Trigger: GGAATGATGCAGCCCCCACAAATCACAGAAGGCCTG...TGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CAA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGATTCTGGGAGAAGCGCTaGAGCTGCTTCTGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGFWEKR*SCFCRY
Trigger: GTACCTGCAGAAGCAGCTCAAGCGCTTCTCCCAGAA...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp CGTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTAGAACAACAACTGAGATaGGCTCGCAGAGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: RLSGFWGDCKARKGNIPVEQQLR*ARRVGG
Trigger: GCCACCCACTCTGCGAGCCAATCTCAGTTGTTGTTC...TACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp AAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGAGAACAACAACTGAGATaGGCTCGCAGAGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: KARKGNIPVPMVCTGTAGEQQLR*ARRVGG
Trigger: GCCACCCACTCTGCGAGCCAATCTCAGTTGTTGTTC...TCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTTCCGTGGGAGGTGAGTaGGTGTCTTACGAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGSVGGE*VSYESL
Trigger: AAGACTTTCGTAAGACACCAACTCACCTCCCACGGA...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS-3UTR CAA 90 bp TCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCATTCTGGGAGAAGCGCTaGAGCTGCTTCTGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: SGVTARQGRATSQYLWSAFWEKR*SCFCRY
Trigger: GTACCTGCAGAAGCAGCTCAAGCGCTTCTCCCAGAA...TGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp GGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGACAGCGGGACAAGCTGAGGGGCTCCAAGCCCTaGCAATTTTTCTTACCCTCA +
Preference number: 5 (lower is better)
Translates to: GRATSQYLWSAQGQRDKLRGSKP*QFFLPS
Trigger: TGAGGGTAAGAAAAATTGCAAGGGCTTGGAGCCCCT...CAGCTTGTCCCGCTGTCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp TGGCTCGCAGAGTGGGTGGCAGGTAAACAGATGCGTCTCTCTGGCTTCTGGGGTAGGGGCTCCAAGCCCTaGCAATTTTTCTTACCCTCA +
Preference number: 5 (lower is better)
Translates to: WLAEWVAGKQMRLSGFWGRGSKP*QFFLPS
Trigger: TGAGGGTAAGAAAAATTGCAAGGGCTTGGAGCCCCT...ACCCCAGAAGCCAGAGAGACGCATCTGTTTACCTGCCACCCACTCTGCGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp GTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGAGAACAACAACTGAGATaGGCTCGCAGAGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: VTARQGRATSQYLWSAQGEQQLR*ARRVGG
Trigger: GCCACCCACTCTGCGAGCCAATCTCAGTTGTTGTTC...TCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp GTCTCTCTGGCTTCTGGGGTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACAGGGGCTCCAAGCCCTaGCAATTTTTCTTACCCTCA +
Preference number: 5 (lower is better)
Translates to: VSLASGVTARQGRATSQYRGSKP*QFFLPS
Trigger: TGAGGGTAAGAAAAATTGCAAGGGCTTGGAGCCCCT...GTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCACCCCAGAAGCCAGAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267594.5
ENST00000557000.2
ENST00000611800.2
ENST00000617881.3
CDS-3UTR CAA 90 bp GTGACTGCAAGGCAAGGAAGGGCAACATCCCAGTACCTATGGTCTGCACAGGGATCCGTGGGAGGTGAGTaGGTGTCTTACGAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: VTARQGRATSQYLWSAQGSVGGE*VSYESL
Trigger: AAGACTTTCGTAAGACACCAACTCACCTCCCACGGA...TCCCTGTGCAGACCATAGGTACTGGGATGTTGCCCTTCCTTGCCTTGCAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS CCA 72 bp GAGCTGACCGAAGGTGCGGCCCAGGCCCCACCAACGTaGCCCGGCAGGTTCCCCACTGCAGACCTGGGACAG +
Preference number: 6 (lower is better)
Translates to: ELTEGAAQAPPT*PGRFPTADLGQ
Trigger: CTGTCCCAGGTCTGCAGTGGGGAACCTGCCGGGCCACGTTGGTGGGGCCTGGGCCGCACCTTCGGTCAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556222.1
ENST00000626058.1
CDS CCA 72 bp ACACTGACCGAAGGTGCGGCCCAGGCCCCACCAACGTaGCCCGGCAGGTTCCCCACTGCAGACCTGGGACAG +
Preference number: 6 (lower is better)
Translates to: TLTEGAAQAPPT*PGRFPTADLGQ
Trigger: CTGTCCCAGGTCTGCAGTGGGGAACCTGCCGGGCCACGTTGGTGGGGCCTGGGCCGCACCTTCGGTCAGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS GCA 72 bp GGGATGGGTTTCAGCACCACGGGCCTGCACACCTTCTaGCCCAGGCCGTCCACATCCTTGCAGAGGTGCGCC +
Preference number: 6 (lower is better)
Translates to: GMGFSTTGLHTF*PRPSTSLQRCA
Trigger: GGCGCACCTCTGCAAGGATGTGGACGGCCTGGGGCAGAAGGTGTGCAGGCCCGTGGTGCTGAAACCCATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267594.5
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
CDS CCA 72 bp ATCCTTGCAGAGGTGCGCCAGCTCCCCGGGAAAGGCTaGGCTCTTCCTCCAAAGGCCCAGGCTGGGGACAGG +
Preference number: 6 (lower is better)
Translates to: ILAEVRQLPGKG*ALPPKAQAGDR
Trigger: CCTGTCCCCAGCCTGGGCCTTTGGAGGAAGAGCCCAGCCTTTCCCGGGGAGCTGGCGCACCTCTGCAAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000267594.5
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
CDS GCA 72 bp GCTCAGCTCCCAGCTTCCTTGAGATCCCACGGCACCTaGAGCCCTGCTGGCCCATTCTGCACTGCCCGCTCA +
Preference number: 6 (lower is better)
Translates to: AQLPASLRSHGT*SPAGPFCTARS
Trigger: TGAGCGGGCAGTGCAGAATGGGCCAGCAGGGCTGCAGGTGCCGTGGGATCTCAAGGAAGCTGGGAGCTGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS GCA 72 bp GGCTGCGGGCAGCAGGGATTCCCCCGAAGAAGCATCTaGAGCAATTTCATGCCTCCTCGGCCGCCACCCACG +
Preference number: 6 (lower is better)
Translates to: GCGQQGFPRRSI*SNFMPPRPPPT
Trigger: CGTGGGTGGCGGCCGAGGAGGCATGAAATTGCTGCAGATGCTTCTTCGGGGGAATCCCTGCTGCCCGCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS GCA 72 bp CCACTGCACGAGGCTTTCCATGAAGAGGGTAGGCTCTaGTGGTGGCCGGCAGCTCCAAGGAAGGGCACCGAG +
Preference number: 6 (lower is better)
Translates to: PLHEAFHEEGRL*WWPAAPRKGTE
Trigger: CTCGGTGCCCTTCCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS GCA 72 bp CACGGAGCGGCGGCAGGGTGCGGACTTATCCAGGGCTaGCTTGATGTCGCTGGACGCCAGGTTCACGAAGTT +
Preference number: 6 (lower is better)
Translates to: HGAAAGCGLIQG*LDVAGRQVHEV
Trigger: AACTTCGTGAACCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATAAGTCCGCACCCTGCCGCCGCTCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS GCA 72 bp CAGGTACTTGCGATGGTCCACGGAGCGGCGGCAGGGTaGGGACTTATCCAGGGCTGCCTTGATGTCGCTGGA +
Preference number: 6 (lower is better)
Translates to: QVLAMVHGAAAG*GLIQGCLDVAG
Trigger: TCCAGCGACATCAAGGCAGCCCTGGATAAGTCCGCACCCTGCCGCCGCTCCGTGGACCATCGCAAGTACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS GCA 72 bp AGGGATTCCCCCGAAGAAGCATCTGCAGCAATTTCATaGCTCCTCGGCCGCCACCCACGGCACCTCGCCCCT +
Preference number: 6 (lower is better)
Translates to: RDSPEEASAAIS*LLGRHPRHLAP
Trigger: AGGGGCGAGGTGCCGTGGGTGGCGGCCGAGGAGGCATGAAATTGCTGCAGATGCTTCTTCGGGGGAATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557000.2
ENST00000611800.2
CDS CCA 72 bp CTGCACGAGGCTTTCCATGAAGAGGGTAGGCTCTGCTaGTGGCCGGCAGCTCCAAGGAAGGGCACCGAGCTG +
Preference number: 6 (lower is better)
Translates to: LHEAFHEEGRLC*WPAAPRKGTEL
Trigger: CAGCTCGGTGCCCTTCCTTGGAGCTGCCGGCCACCAGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS CCA 72 bp GGCTGGAATCAGGGCCCAAATCCAGGAGCAGCCTCCTaGGCCGGTCCTCAGACCCCCTTTTCAGGTAGGGCT +
Preference number: 6 (lower is better)
Translates to: GWNQGPNPGAAS*AGPQTPFSGRA
Trigger: AGCCCTACCTGAAAAGGGGGTCTGAGGACCGGCCCAGGAGGCTGCTCCTGGATTTGGGCCCTGATTCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS CAA 72 bp GAGCGGCGGCAGGGTGCGGACTTATCCAGGGCTGCCTaGATGTCGCTGGACGCCAGGTTCACGAAGTTCAGC +
Preference number: 6 (lower is better)
Translates to: ERRQGADLSRAA*MSLDARFTKFS
Trigger: GCTGAACTTCGTGAACCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATAAGTCCGCACCCTGCCGCCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS CAA 72 bp GCATTGACGCGGCCCACCAAGGAGACCCCAGGCATCTaGAGCGGCTCCTTTTCAGCCAGGGCCCTTGGAGAC +
Preference number: 6 (lower is better)
Translates to: ALTRPTKETPGI*SGSFSARALGD
Trigger: GTCTCCAAGGGCCCTGGCTGAAAAGGAGCCGCTCAAGATGCCTGGGGTCTCCTTGGTGGGCCGCGTCAATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS CAA 90 bp TGGTCCACGGAGCGGCGGCAGGGTGCGGACTTATCCAGGGCTGCCTaGATGTCGCTGGACGCCAGGTTCACGAAGTTCAGCAGCATCTTC +
Preference number: 6 (lower is better)
Translates to: WSTERRQGADLSRAA*MSLDARFTKFSSIF
Trigger: GAAGATGCTGCTGAACTTCGTGAACCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATAAGTCCGCACCCTGCCGCCGCTCCGTGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS TCA 72 bp AGCGGCGGCAGGGTGCGGACTTATCCAGGGCTGCCTTaGTGTCGCTGGACGCCAGGTTCACGAAGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: SGGRVRTYPGLP*CRWTPGSRSSA
Trigger: TGCTGAACTTCGTGAACCTGGCGTCCAGCGACATCAAGGCAGCCCTGGATAAGTCCGCACCCTGCCGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS CAA 72 bp CCAAAGACATTGAAGATGGGTGGGGGCACGGCTGGCTaGGTGGGGATGGGTTTCAGCACCACGGGCCTGCAC +
Preference number: 6 (lower is better)
Translates to: PKTLKMGGGTAG*VGMGFSTTGLH
Trigger: GTGCAGGCCCGTGGTGCTGAAACCCATCCCCACCAAGCCAGCCGTGCCCCCACCCATCTTCAATGTCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267594.5
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
CDS CAA 72 bp CCGAGCTCCGTCCGGCTGGAAGCAGTTGTGCAACCCTaGAGTGGGCTGAATGGAGGACAACTCCCCGGAGCT +
Preference number: 6 (lower is better)
Translates to: PSSVRLEAVVQP*SGLNGGQLPGA
Trigger: AGCTCCGGGGAGTTGTCCTCCATTCAGCCCACTCAAGGGTTGCACAACTGCTTCCAGCCGGACGGAGCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556222.1
ENST00000626058.1
CDS CCA 72 bp AGCTTCCTTGAGATCCCACGGCACCTGCAGCCCTGCTaGCCCATTCTGCACTGCCCGCTCATGAAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: SFLEIPRHLQPC*PILHCPLMKLS
Trigger: AGACAGCTTCATGAGCGGGCAGTGCAGAATGGGCCAGCAGGGCTGCAGGTGCCGTGGGATCTCAAGGAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS CCA 72 bp GTAGCCAAAGACATTGAAGATGGGTGGGGGCACGGCTaGCTTGGTGGGGATGGGTTTCAGCACCACGGGCCT +
Preference number: 6 (lower is better)
Translates to: VAKDIEDGWGHG*LGGDGFQHHGP
Trigger: AGGCCCGTGGTGCTGAAACCCATCCCCACCAAGCCAGCCGTGCCCCCACCCATCTTCAATGTCTTTGGCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267594.5
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
CDS CAA 72 bp TGTCCATGGTACTGGAAGGGGCAGCAACTCCAGGCATaGACGCGGCCCACCAAGGAGACCCCAGGCATCTTG +
Preference number: 6 (lower is better)
Translates to: CPWYWKGQQLQA*TRPTKETPGIL
Trigger: CAAGATGCCTGGGGTCTCCTTGGTGGGCCGCGTCAATGCCTGGAGTTGCTGCCCCTTCCAGTACCATGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS CCA 72 bp AGGCATCTTGAGCGGCTCCTTTTCAGCCAGGGCCCTTaGAGACATGGACACCAGGGTAGTCTCAGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RHLERLLFSQGP*RHGHQGSLRSQ
Trigger: CTGGGACCTGAGACTACCCTGGTGTCCATGTCTCCAAGGGCCCTGGCTGAAAAGGAGCCGCTCAAGATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS GCA 72 bp TCACATCACTGTCGGATGCCATCACCAGGGGGCCACTaGACGAGGCTTTCCATGAAGAGGGTAGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: SHHCRMPSPGGH*TRLSMKRVGSA
Trigger: AGCAGAGCCTACCCTCTTCATGGAAAGCCTCGTGCAGTGGCCCCCTGGTGATGGCATCCGACAGTGATGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS TCA 72 bp AAGCCTCCCCACCAGGCCCGTGGACTCCGTGGGAGGTaGGTTGGTGTCTTACGAAAGTCTTTCCAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: KPPHQARGLRGR*VGVLRKSFQSS
Trigger: AGAGCTTTGGAAAGACTTTCGTAAGACACCAACTCACCTCCCACGGAGTCCACGGGCCTGGTGGGGAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS GCA 72 bp CACGAAGTTCAGCAGCATCTTCACATCACTGTCGGATaGCATCACCAGGGGGCCACTGCACGAGGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: HEVQQHLHITVG*HHQGATARGFP
Trigger: TGGAAAGCCTCGTGCAGTGGCCCCCTGGTGATGGCATCCGACAGTGATGTGAAGATGCTGCTGAACTTCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000267594.5
ENST00000554404.1
ENST00000556222.1
ENST00000557000.2
ENST00000557719.1
ENST00000611800.2
ENST00000617881.3
ENST00000620448.3
ENST00000626058.1
ENST00000629121.1
CDS CAA 90 bp GTAGTAAGCCTCCCCACCAGGCCCGTGGACTCCGTGGGAGGTGAGTaGGTGTCTTACGAAAGTCTTTCCAAAGCTCTTAATGTGGGCTGT +
Preference number: 6 (lower is better)
Translates to: VVSLPTRPVDSVGGE*VSYESLSKALNVGC
Trigger: ACAGCCCACATTAAGAGCTTTGGAAAGACTTTCGTAAGACACCAACTCACCTCCCACGGAGTCCACGGGCCTGGTGGGGAGGCTTACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS CCA 72 bp TCCCCACCAGGCCCGTGGACTCCGTGGGAGGTGAGTTaGTGTCTTACGAAAGTCTTTCCAAAGCTCTTAATG +
Preference number: 6 (lower is better)
Translates to: SPPGPWTPWEVS*CLTKVFPKLLM
Trigger: CATTAAGAGCTTTGGAAAGACTTTCGTAAGACACCAACTCACCTCCCACGGAGTCCACGGGCCTGGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3
CDS CAA 72 bp CTCCCCACCAGGCCCGTGGACTCCGTGGGAGGTGAGTaGGTGTCTTACGAAAGTCTTTCCAAAGCTCTTAAT +
Preference number: 6 (lower is better)
Translates to: LPTRPVDSVGGE*VSYESLSKALN
Trigger: ATTAAGAGCTTTGGAAAGACTTTCGTAAGACACCAACTCACCTCCCACGGAGTCCACGGGCCTGGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267594.5
ENST00000617881.3