Pregenerated sensors for FAM180B (Homo sapiens)
Ensembl gene IDs: ENSG00000196666Ensembl transcript IDs: ENST00000538490.3, ENST00000644402.4
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTaGCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: THSHTHCLQVVPLAL*PLLAHSLRPRAWVL Trigger: AAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACTCACACACACACTaGCTGCAAGTCGTGCCCTTAGCTCTGTGCCCACTCCTTGCGCAC | + |
|
Preference number: 1 (lower is better) Translates to: HTHTHTHTHTHSHTH*LQVVPLALCPLLAH Trigger: GTGCGCAAGGAGTGGGCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR TCA 90 bp | TCCACAGGACCTGTCACAGACTGCCAGGGTAGGAGTTGGAAGGTCTaGCCAGGCCTTACTTGGGGCAGCTTCCCTTCAGCATCTCTTGAA | + |
|
Preference number: 1 (lower is better) Translates to: STGPVTDCQGRSWKV*PGLTWGSFPSASLE Trigger: TTCAAGAGATGCTGAAGGGAAGCTGCCCCAAGTAAGGCCTGGTCAGACCTTCCAACTCCTACCCTGGCAGTCTGTGACAGGTCCTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR CCA 90 bp | TTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTaGGTTCTTAGCCTCTCAAGATCTAGGAAACAAGATCTGGTCGGG | + |
|
Preference number: 1 (lower is better) Translates to: LALCPLLAHSLRPRA*VLSLSRSRKQDLVG Trigger: CCCGACCAGATCTTGTTTCCTAGATCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR TCA 90 bp | GGTCTGACCAGGCCTTACTTGGGGCAGCTTCCCTTCAGCATCTCTTaGACACACTTCTCAACCCTGACCCCTGATCTCCACACACACACA | + |
|
Preference number: 1 (lower is better) Translates to: GLTRPYLGQLPFSIS*THFSTLTPDLHTHT Trigger: TGTGTGTGTGTGGAGATCAGGGGTCAGGGTTGAGAAGTGTGTTCAAGAGATGCTGAAGGGAAGCTGCCCCAAGTAAGGCCTGGTCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR TCA 90 bp | TGGGGCAGCTTCCCTTCAGCATCTCTTGAACACACTTCTCAACCCTaGCCCCTGATCTCCACACACACACACACACACACACACACACAC | + |
|
Preference number: 1 (lower is better) Translates to: WGSFPSASLEHTSQP*PLISTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGATCAGGGGTCAGGGTTGAGAAGTGTGTTCAAGAGATGCTGAAGGGAAGCTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR GCA 90 bp | ACAGAACATTTTATGAGAAGAGCAACACAGAATCAGGGCCACACCTaGTCCAGCCCACCTCCGCTTGTCTCTCCTTGGTCTCCCAGCCTT | + |
|
Preference number: 1 (lower is better) Translates to: TEHFMRRATQNQGHT*SSPPPLVSPWSPSL Trigger: AAGGCTGGGAGACCAAGGAGAGACAAGCGGAGGTGGGCTGGAGCAGGTGTGGCCCTGATTCTGTGTTGCTCTTCTCATAAAATGTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR TCA 90 bp | TTGGTTGTGCCTAAAAGGGGATGCTCAGCACCTAGAGGATTCCTGTaGATTCCACAGGACCTGTCACAGACTGCCAGGGTAGGAGTTGGA | + |
|
Preference number: 1 (lower is better) Translates to: LVVPKRGCSAPRGFL*IPQDLSQTARVGVG Trigger: TCCAACTCCTACCCTGGCAGTCTGTGACAGGTCCTGTGGAATTCACAGGAATCCTCTAGGTGCTGAGCATCCCCTTTTAGGCACAACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR TCA 90 bp | GCTTCCCTTCAGCATCTCTTGAACACACTTCTCAACCCTGACCCCTaGTCTCCACACACACACACACACACACACACACACACACACACT | + |
|
Preference number: 1 (lower is better) Translates to: ASLQHLLNTLLNPDP*SPHTHTHTHTHTHT Trigger: AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGATCAGGGGTCAGGGTTGAGAAGTGTGTTCAAGAGATGCTGAAGGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR GCA 90 bp | GCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAACCAGACAGAAGCCCCTaGGCAAGATGGGTCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: AHSLRTPCDPEPGFLASQPDRSP*ARWVCL Trigger: CAGGCAGACCCATCTTGCGCAGGGGCTTCTGTCTGG...TTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR CAA 90 bp | CTGCAAGTCGTGCCCTTAGCTCTGTGCCCACTCCTTGCGCACTCCTaGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGATCTAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LQVVPLALCPLLAHS*RPRAWVLSLSRSRK Trigger: TTTCCTAGATCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCACGACTTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCCAGACAGAAGCCCCTaGGCAAGATGGGTCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: KVDSPNPDGNLEAQRPQIPDRSP*ARWVCL Trigger: CAGGCAGACCCATCTTGCGCAGGGGCTTCTGTCTGG...GATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAATCTGTGCCCACTCCTTaGGCACTCCTTGCGACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PRWELGGSETPNPWLCLKSVPTP*ALLATQ Trigger: CTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGA...TTTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAACAAGATGGGTCTGCCTaGGGGGTTGAGGAGGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: PRWELGGSETPNPWLCLKQDGSA*GVEEEM Trigger: CATCTCCTCCTCAACCCCCCAGGCAGACCCATCTTG...TTTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR CCA 90 bp | CTAAAAGGGGATGCTCAGCACCTAGAGGATTCCTGTGAATTCCACAGGACCTGTCAAGATGGGTCTGCCTaGGGGGTTGAGGAGGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: LKGDAQHLEDSCEFHRTCQDGSA*GVEEEM Trigger: CATCTCCTCCTCAACCCCCCAGGCAGACCCATCTTG...ACAGGTCCTGTGGAATTCACAGGAATCCTCTAGGTGCTGAGCATCCCCTTTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCACTCACACACACACTaGCTGCAAGTCGTGCCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: KVDSPNPDGNLEAQRPQIHSHTH*LQVVPL Trigger: TAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTG...GATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR CCA 90 bp | ACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAATTGCGACCCAGAGCCTaGGTTCTTAGCCTCTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: TQMGTWRLRDPKSLVVPKLRPRA*VLSLSR Trigger: TCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAA...TTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCGTGCCTAAAAGGGGATaGTCAGCACCTAGAGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: KVDSPNPDGNLEAQRPQIVPKRG*SAPRGF Trigger: GAATCCTCTAGGTGCTGAGCATCCCCTTTTAGGCAC...GATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR CCA 90 bp | CTAAAAGGGGATGCTCAGCACCTAGAGGATTCCTGTGAATTCCACAGGACCTGTTTGCGACCCAGAGCCTaGGTTCTTAGCCTCTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LKGDAQHLEDSCEFHRTCLRPRA*VLSLSR Trigger: TCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAA...ACAGGTCCTGTGGAATTCACAGGAATCCTCTAGGTGCTGAGCATCCCCTTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR GCA 72 bp | CACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTaGCCACTCCTTGCGCACTCCTTGCGACCCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HTHCLQVVPLAL*PLLAHSLRPRA Trigger: GGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR TCA 72 bp | CCTGTCACAGACTGCCAGGGTAGGAGTTGGAAGGTCTaGCCAGGCCTTACTTGGGGCAGCTTCCCTTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PVTDCQGRSWKV*PGLTWGSFPSA Trigger: TGCTGAAGGGAAGCTGCCCCAAGTAAGGCCTGGTCAGACCTTCCAACTCCTACCCTGGCAGTCTGTGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAACTCTGTGCCCACTCCTaGCGCACTCCTTGCGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: TQMGTWRLRDPKSLVVPKLCAHS*RTPCDP Trigger: TGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAG...TTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR GCA 72 bp | ACACACACACACACACACACACACTCACACACACACTaGCTGCAAGTCGTGCCCTTAGCTCTGTGCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHSHTH*LQVVPLALCPL Trigger: GAGTGGGCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR CAA 90 bp | CCAACTGACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGCTCTGTGCCCACTCCTaGCGCACTCCTTGCGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: PTDRTQKVDSPNPDGNLELCAHS*RTPCDP Trigger: TGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAG...CTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTCAGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR TCA 72 bp | AGGCCTTACTTGGGGCAGCTTCCCTTCAGCATCTCTTaGACACACTTCTCAACCCTGACCCCTGATCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RPYLGQLPFSIS*THFSTLTPDLH Trigger: GTGGAGATCAGGGGTCAGGGTTGAGAAGTGTGTTCAAGAGATGCTGAAGGGAAGCTGCCCCAAGTAAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR GCA 72 bp | TTTATGAGAAGAGCAACACAGAATCAGGGCCACACCTaGTCCAGCCCACCTCCGCTTGTCTCTCCTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FMRRATQNQGHT*SSPPPLVSPWS Trigger: AGACCAAGGAGAGACAAGCGGAGGTGGGCTGGAGCAGGTGTGGCCCTGATTCTGTGTTGCTCTTCTCATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR CCA 72 bp | TGCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTaGGTTCTTAGCCTCTCAAGATCTAGGAAACAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CPLLAHSLRPRA*VLSLSRSRKQD Trigger: ATCTTGTTTCCTAGATCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR-3UTR CAA 90 bp | CCAACTGACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGCTGACCAGGCCTTACTaGGGGCAGCTTCCCTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PTDRTQKVDSPNPDGNLELTRPY*GQLPFS Trigger: GCTGAAGGGAAGCTGCCCCAAGTAAGGCCTGGTCAG...CTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTCAGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR TCA 72 bp | CCTAAAAGGGGATGCTCAGCACCTAGAGGATTCCTGTaGATTCCACAGGACCTGTCACAGACTGCCAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PKRGCSAPRGFL*IPQDLSQTARV Trigger: TACCCTGGCAGTCTGTGACAGGTCCTGTGGAATTCACAGGAATCCTCTAGGTGCTGAGCATCCCCTTTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR TCA 72 bp | CAGCATCTCTTGAACACACTTCTCAACCCTGACCCCTaGTCTCCACACACACACACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: QHLLNTLLNPDP*SPHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGATCAGGGGTCAGGGTTGAGAAGTGTGTTCAAGAGATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR CCA 72 bp | CTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTaGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LKKSILPTQMGT*RLRDPKSLVVP Trigger: AGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR TCA 72 bp | TTCCCTTCAGCATCTCTTGAACACACTTCTCAACCCTaGCCCCTGATCTCCACACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: FPSASLEHTSQP*PLISTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGGAGATCAGGGGTCAGGGTTGAGAAGTGTGTTCAAGAGATGCTGAAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR GCA 72 bp | CCCTCTGAGGTATTCACCCGACGCTTGTTGAGATATTaGCTCCCTACCCCAAAAGAGATAATGTTCCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSEVFTRRLLRY*LPTPKEIMFLP Trigger: AGGGAGGAACATTATCTCTTTTGGGGTAGGGAGGCAATATCTCAACAAGCGTCGGGTGAATACCTCAGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | GCAAGTCGTGCCCTTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCAGCACCTCCCACGCTGGTaGTGTCCATGGGCTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASRALSSVPTPCALLATQHLPRW*CPWAAL Trigger: CAGGGCAGCCCATGGACAGCACCAGCGTGGGAGGTG...CTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCACGACTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAACGCTGGTGCTGTCCATaGGCTGCCCTGCATGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHSLRTPCDPEPGFLASQRWCCP*AALHGA Trigger: AGCCCCATGCAGGGCAGCCCATGGACAGCACCAGCG...TTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | TTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTCACTTCCGGGGCCTCTaGCTCCTGCAGGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LALCPLLAHSLRPRAWVLHFRGL*LLQATS Trigger: GGAGGTGGCCTGCAGGAGCCAGAGGCCCCGGAAGTG...AAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | GCCCTTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTCTCTGCTCCCTCATCTaGCTGCCACACACCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSSVPTPCALLATQSLGLCSLI*LPHTSA Trigger: AGCTGAGGTGTGTGGCAGGCAGATGAGGGAGCAGAG...ACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | GCAAGTCGTGCCCTTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCAGGTCCATGGGCTGCCCTaGATGGGGCTGGGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRALSSVPTPCALLATQVHGLP*MGLGCS Trigger: ACTACAACCCAGCCCCATGCAGGGCAGCCCATGGAC...CTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCACGACTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | ACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTGCCCAGGAGAGCGAAGACCTaGGCCCAGCGGCCCCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: THTLTHTLPASRALSSVPRRAKT*AQRPRS Trigger: GGAACGGGGCCGCTGGGCCCAGGTCTTCGCTCTCCT...GGGCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GAAACAAGATCTGGTCGGGGTAAGCAGAGAGGGGGTGTCCAGGGTGCAAGCCAAAGGAGAGCGAAGACCTaGGCCCAGCGGCCCCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETRSGRGKQRGGVQGASQRRAKT*AQRPRS Trigger: GGAACGGGGCCGCTGGGCCCAGGTCTTCGCTCTCCT...TTGGCTTGCACCCTGGACACCCCCTCTCTGCTTACCCCGACCAGATCTTGTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGAAGGGGGCCGGTCCTaGGGGCAGAAACCTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHSLRTPCDPEPGFLASQEGGRS*GQKPLH Trigger: GTGCAAAGGTTTCTGCCCCCAGGACCGGCCCCCTTC...TTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CTGCAAGTCGTGCCCTTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCCTCTGCTCCCTCATCTaGCTGCCACACACCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQVVPLALCPLLAHSLRPLCSLI*LPHTSA Trigger: AGCTGAGGTGTGTGGCAGGCAGATGAGGGAGCAGAG...GGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCACGACTTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | GCCCTTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCCTCATCCTGGATGTaGAGCTGCCCCATGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSSVPTPCALLATQSLGSSSWM*SCPMTS Trigger: GGATGTCATGGGGCAGCTGCACATCCAGGATGAGGA...ACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGACTGGGCACGTGGTGCTaGAGGAGGAGTCTGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLAHSLRPRAWVLSLSRLGTWC*RRSLSR Trigger: CCGACTCAGACTCCTCCTGCAGCACCACGTGCCCAG...TCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGACCAGACAGAAGCCCCTaGGCAAGATGGGTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLAHSLRPRAWVLSLSRPDRSP*ARWVCL Trigger: CAGGCAGACCCATCTTGCGCAGGGGCTTCTGTCTGG...TCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTGCCGCTGGTGCTGTCCATaGGCTGCCCTGCATGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: THTHSHTHCLQVVPLALCRWCCP*AALHGA Trigger: AGCCCCATGCAGGGCAGCCCATGGACAGCACCAGCG...GCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| 3UTR CAA 72 bp | GTGCCCTTAGCTCTGTGCCCACTCCTTGCGCACTCCTaGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPLALCPLLAHS*RPRAWVLSLSR Trigger: TCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | AAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCGCTGCAGGAGGAGTCTaGGTCGGCGGCCTGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KVDSPNPDGNLEAQRPQIAAGGV*VGGLGV Trigger: CACACCCAGGCCGCCGACTCAGACTCCTCCTGCAGC...GATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | ACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAGCTGCAGGAGGAGTCTaGGTCGGCGGCCTGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQMGTWRLRDPKSLVVPKAAGGV*VGGLGV Trigger: CACACCCAGGCCGCCGACTCAGACTCCTCCTGCAGC...TTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | TTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGGAGTTGGAAGGTCTaGCCAGGCCTTACTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LALCPLLAHSLRPRAWVLRSWKV*PGLTWG Trigger: GCCCCAAGTAAGGCCTGGTCAGACCTTCCAACTCCT...AAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGATCCTGGATGTGCAGCTaGCCCATGACATCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLAHSLRPRAWVLSLSRSWMCS*PMTSSS Trigger: GGAGCTGGATGTCATGGGGCAGCTGCACATCCAGGA...TCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTGCCGCAGGTCCTGGAGCTaGTGCAGCCACTGCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: THTHSHTHCLQVVPLALCRRSWS*CSHCSV Trigger: CACTGAGCAGTGGCTGCAGCAGCTCCAGGACCTGCG...GCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | GCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGGACCTGTCACAGACTaGCAGGGTAGGAGTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHSLRTPCDPEPGFLASQGPVTD*QGRSWK Trigger: CTTCCAACTCCTACCCTGGCAGTCTGTGACAGGTCC...TTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | ACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAACACTTCCGGGGCCTCTaGCTCCTGCAGGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQMGTWRLRDPKSLVVPKHFRGL*LLQATS Trigger: GGAGGTGGCCTGCAGGAGCCAGAGGCCCCGGAAGTG...TTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGCTAGTTCCTCATCCTaGATGTGCAGCTGCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AHSLRTPCDPEPGFLASQASSSS*MCSCPM Trigger: CATGGGGCAGCTGCACATCCAGGATGAGGAACTAGC...TTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GAAACAAGATCTGGTCGGGGTAAGCAGAGAGGGGGTGTCCAGGGTGCAAGCCAAGGCGGCCTGGGTGTGTaGACGCTAGTTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETRSGRGKQRGGVQGASQGGLGV*TLVPHP Trigger: AGGATGAGGAACTAGCGTCCACACACCCAGGCCGCC...TTGGCTTGCACCCTGGACACCCCCTCTCTGCTTACCCCGACCAGATCTTGTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | ACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTGCCCTGCCCTCCAAGTCACTaGGCACGTGGTGCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: THTLTHTLPASRALSSVPCPPSH*ARGAAG Trigger: TCCTGCAGCACCACGTGCCCAGTGACTTGGAGGGCA...GGGCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | TTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTCACACTTCTCAACCCTaGCCCCTGATCTCCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LALCPLLAHSLRPRAWVLHTSQP*PLISTH Trigger: GTGTGTGGAGATCAGGGGTCAGGGTTGAGAAGTGTG...AAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | CTGCAAGTCGTGCCCTTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCCCCTTCAGCATCTCTTaGACACACTTCTCAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQVVPLALCPLLAHSLRPPFSIS*THFSTL Trigger: CAGGGTTGAGAAGTGTGTTCAAGAGATGCTGAAGGG...GGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCACGACTTGCAG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGTGCTGTCCATGGGCTaGCCTGCATGGGGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHSHTHCLQVVPLVLSMG*PAWGWV Trigger: AACCCAGCCCCATGCAGGGCAGCCCATGGACAGCAC...TAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTGTCCAGGGTGCAAGCCAAGCCCAGAGATCTGAACACGGTGAAAAGAATCGTGCCCTTAGCTCTGTaGCCACTCCTTGCGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVSRVQAKPRDLNTVKRIVPLAL*PLLAHS Trigger: GGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCAC...GATTCTTTTCACCGTGTTCAGATCTCTGGGCTTGGCTTGCACCCTGGACACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGGGCCACCTCCCACGCTaGTGCTGTCCATGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DRTQKVDSPNPDGNLEAQGHLPR*CCPWAA Trigger: GGCAGCCCATGGACAGCACCAGCGTGGGAGGTGGCC...CTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GGTGAAAAGAATCAGATGCCAGACAGAAGCCCCTGCGCAAGATGGGTCTGCCTGGGCGGCCTGGGTGTGTaGACGCTAGTTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GEKNQMPDRSPCARWVCLGGLGV*TLVPHP Trigger: AGGATGAGGAACTAGCGTCCACACACCCAGGCCGCC...CAGGCAGACCCATCTTGCGCAGGGGCTTCTGTCTGGCATCTGATTCTTTTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GAAACAAGATCTGGTCGGGGTAAGCAGAGAGGGGGTGTCCAGGGTGCAAGCCAAAAGTCACTGGGCACGTaGTGCTGCAGGAGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETRSGRGKQRGGVQGASQKSLGT*CCRRSL Trigger: CAGACTCCTCCTGCAGCACCACGTGCCCAGTGACTT...TTGGCTTGCACCCTGGACACCCCCTCTCTGCTTACCCCGACCAGATCTTGTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGAAGGGGGCCGGTCCTaGGGGCAGAAACCTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHSHTHCLQVVPLEGGRS*GQKPLH Trigger: GTGCAAAGGTTTCTGCCCCCAGGACCGGCCCCCTTC...TAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | ACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTGCCCCAAGATGGGTCTGCCTaGGGGGTTGAGGAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: THTLTHTLPASRALSSVPQDGSA*GVEEEM Trigger: CATCTCCTCCTCAACCCCCCAGGCAGACCCATCTTG...GGGCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GAAACAAGATCTGGTCGGGGTAAGCAGAGAGGGGGTGTCCAGGGTGCAAGCCAACCGCTTGTCTCTCCTTaGTCTCCCAGCCTTACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ETRSGRGKQRGGVQGASQPLVSP*SPSLTP Trigger: GGGAGTAAGGCTGGGAGACCAAGGAGAGACAAGCGG...TTGGCTTGCACCCTGGACACCCCCTCTCTGCTTACCCCGACCAGATCTTGTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | TTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTCTCAACCACGTCCTCTaGGTCTCACTCTGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LALCPLLAHSLRPRAWVLLNHVL*VSLCSA Trigger: TGCTGAACAGAGTGAGACTCAGAGGACGTGGTTGAG...AAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | AAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCGCAGGGTCGCAGCCATaGTCAACCACGTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KSILPTQMGTWRLRDPKSAGSQP*STTSSE Trigger: CTCAGAGGACGTGGTTGAGCATGGCTGCGACCCTGC...GGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CTAAAAGGGGATGCTCAGCACCTAGAGGATTCCTGTGAATTCCACAGGACCTGTCACCTCCCACGCTGGTaGTGTCCATGGGCTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGDAQHLEDSCEFHRTCHLPRW*CPWAAL Trigger: CAGGGCAGCCCATGGACAGCACCAGCGTGGGAGGTG...ACAGGTCCTGTGGAATTCACAGGAATCCTCTAGGTGCTGAGCATCCCCTTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCTTACTTGGGGCAGCTTCCCTTCAGCATCTCTTGAACACACTTCTCAACTGGGCACGTGGTGCTaGAGGAGGAGTCTGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLTWGSFPSASLEHTSQLGTWC*RRSLSR Trigger: CCGACTCAGACTCCTCCTGCAGCACCACGTGCCCAG...TTGAGAAGTGTGTTCAAGAGATGCTGAAGGGAAGCTGCCCCAAGTAAGGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTGTCCAGGGTGCAAGCCAAGCCCAGAGATCTGAACACGGTGAAAAGAATCAGCTGCTGCAGCCACTaGTCAGTGCCCTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVSRVQAKPRDLNTVKRISCCSH*SVPSKS Trigger: TGACTTGGAGGGCACTGAGCAGTGGCTGCAGCAGCT...GATTCTTTTCACCGTGTTCAGATCTCTGGGCTTGGCTTGCACCCTGGACACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | GAAACAAGATCTGGTCGGGGTAAGCAGAGAGGGGGTGTCCAGGGTGCAAGCCAACCAGAGTGTTTCCTGTaGCAGGAGAGCGAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETRSGRGKQRGGVQGASQPECFL*QESEDL Trigger: CAGGTCTTCGCTCTCCTGGCACAGGAAACACTCTGG...TTGGCTTGCACCCTGGACACCCCCTCTCTGCTTACCCCGACCAGATCTTGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGCCAGACAGAAGCCCCTaGGCAAGATGGGTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSQPRWELGGSETPNPWLPDRSP*ARWVCL Trigger: CAGGCAGACCCATCTTGCGCAGGGGCTTCTGTCTGG...CAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTATCTGTGCCCACTCCTTaGGCACTCCTTGCGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHSHTHCLQVVPLSVPTP*ALLATQ Trigger: CTGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGA...TAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTGCAAGTCACTGGGCACGTaGTGCTGCAGGAGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: THTHSHTHCLQVVPLALCKSLGT*CCRRSL Trigger: CAGACTCCTCCTGCAGCACCACGTGCCCAGTGACTT...GCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | CCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGATTGCGACCCAGAGCCTaGGTTCTTAGCCTCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLAHSLRPRAWVLSLSRLRPRA*VLSLSR Trigger: TCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAA...TCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | ACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAGCAGGGTCGCAGCCATaGTCAACCACGTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQMGTWRLRDPKSLVVPKAGSQP*STTSSE Trigger: CTCAGAGGACGTGGTTGAGCATGGCTGCGACCCTGC...TTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAAGTCCATGGGCTGCCCTaGATGGGGCTGGGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRWELGGSETPNPWLCLKVHGLP*MGLGCS Trigger: ACTACAACCCAGCCCCATGCAGGGCAGCCCATGGAC...TTTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTGCTCCTCATCCTGGATGTaGAGCTGCCCCATGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: THTHSHTHCLQVVPLALCSSSWM*SCPMTS Trigger: GGATGTCATGGGGCAGCTGCACATCCAGGATGAGGA...GCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CTAAAAGGGGATGCTCAGCACCTAGAGGATTCCTGTGAATTCCACAGGACCTGTCGCAGGTCCTGGAGCTaGTGCAGCCACTGCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGDAQHLEDSCEFHRTCRRSWS*CSHCSV Trigger: CACTGAGCAGTGGCTGCAGCAGCTCCAGGACCTGCG...ACAGGTCCTGTGGAATTCACAGGAATCCTCTAGGTGCTGAGCATCCCCTTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | ACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAGTGCCCTTAGCTCTGTaGCCACTCCTTGCGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQMGTWRLRDPKSLVVPKVPLAL*PLLAHS Trigger: GGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCAC...TTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAAAATCAGGGCCACACCTaGTCCAGCCCACCTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRWELGGSETPNPWLCLKNQGHT*SSPPPL Trigger: AAGCGGAGGTGGGCTGGAGCAGGTGTGGCCCTGATT...TTTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTACAAGATGGGTCTGCCTaGGGGGTTGAGGAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHSHTHCLQVVPLQDGSA*GVEEEM Trigger: CATCTCCTCCTCAACCCCCCAGGCAGACCCATCTTG...TAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAAAGGCAAACCAGGAACTaGAGGGTCGCAGCCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRWELGGSETPNPWLCLKRQTRN*RVAAML Trigger: GAGCATGGCTGCGACCCTGCAGTTCCTGGTTTGCCT...TTTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCAACTGACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGTGCTGTCCATGGGCTaGCCTGCATGGGGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTDRTQKVDSPNPDGNLEVLSMG*PAWGWV Trigger: AACCCAGCCCCATGCAGGGCAGCCCATGGACAGCAC...CTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTCAGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCTTACTTGGGGCAGCTTCCCTTCAGCATCTCTTGAACACACTTCTCAATCCTGGATGTGCAGCTaGCCCATGACATCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLTWGSFPSASLEHTSQSWMCS*PMTSSS Trigger: GGAGCTGGATGTCATGGGGCAGCTGCACATCCAGGA...TTGAGAAGTGTGTTCAAGAGATGCTGAAGGGAAGCTGCCCCAAGTAAGGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | AAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCAGCTGCTGCAGCCACTaGTCAGTGCCCTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVDSPNPDGNLEAQRPQISCCSH*SVPSKS Trigger: TGACTTGGAGGGCACTGAGCAGTGGCTGCAGCAGCT...GATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | GACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGTCCTTGCGCACTCCTTaGGACCCAGAGCCTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRTQKVDSPNPDGNLEAQSLRTP*DPEPGF Trigger: GAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGA...CTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGACGCTTGTTGAGATATTaGCTCCCTACCCCAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLAHSLRPRAWVLSLSRRLLRY*LPTPKE Trigger: CTCTTTTGGGGTAGGGAGGCAATATCTCAACAAGCG...TCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | AAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCTGCCCTGCATGGGGCTaGGTTGTAGTCACACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVDSPNPDGNLEAQRPQICPAWG*VVVTPE Trigger: CTCTGGTGTGACTACAACCCAGCCCCATGCAGGGCA...GATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAATGCCCTGCATGGGGCTaGGTTGTAGTCACACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRWELGGSETPNPWLCLKCPAWG*VVVTPE Trigger: CTCTGGTGTGACTACAACCCAGCCCCATGCAGGGCA...TTTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | CACTTCTCAACCCTGACCCCTGATCTCCACACACACACACACACACACACACACCTCAACCACGTCCTCTaGGTCTCACTCTGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HFSTLTPDLHTHTHTHTHLNHVL*VSLCSA Trigger: TGCTGAACAGAGTGAGACTCAGAGGACGTGGTTGAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGGAGATCAGGGGTCAGGGTTGAGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | GACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGGAGTTGGAAGGTCTaGCCAGGCCTTACTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DRTQKVDSPNPDGNLEAQRSWKV*PGLTWG Trigger: GCCCCAAGTAAGGCCTGGTCAGACCTTCCAACTCCT...CTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCTTAGCCTCTCAAGATCTAGGAAACAAGATCTGGTCGGGGTAAGCAGATCCTTGCGCACTCCTTaGGACCCAGAGCCTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVLSLSRSRKQDLVGVSRSLRTP*DPEPGF Trigger: GAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGA...TCTGCTTACCCCGACCAGATCTTGTTTCCTAGATCTTGAGAGGCTAAGAACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | AAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCGGACCTGTCACAGACTaGCAGGGTAGGAGTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVDSPNPDGNLEAQRPQIGPVTD*QGRSWK Trigger: CTTCCAACTCCTACCCTGGCAGTCTGTGACAGGTCC...GATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTGTCCAGGGTGCAAGCCAAGCCCAGAGATCTGAACACGGTGAAAAGAATCGTGCCTAAAAGGGGATaGTCAGCACCTAGAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: GVSRVQAKPRDLNTVKRIVPKRG*SAPRGF Trigger: GAATCCTCTAGGTGCTGAGCATCCCCTTTTAGGCAC...GATTCTTTTCACCGTGTTCAGATCTCTGGGCTTGGCTTGCACCCTGGACACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | ACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTGCCCCGCTTGTTGAGATATTaGCTCCCTACCCCAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: THTLTHTLPASRALSSVPRLLRY*LPTPKE Trigger: CTCTTTTGGGGTAGGGAGGCAATATCTCAACAAGCG...GGGCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCAACTGACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGAATCAGGGCCACACCTaGTCCAGCCCACCTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTDRTQKVDSPNPDGNLENQGHT*SSPPPL Trigger: AAGCGGAGGTGGGCTGGAGCAGGTGTGGCCCTGATT...CTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTCAGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCTTAGCCTCTCAAGATCTAGGAAACAAGATCTGGTCGGGGTAAGCAGATGCCCTCCAAGTCACTaGGCACGTGGTGCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVLSLSRSRKQDLVGVSRCPPSH*ARGAAG Trigger: TCCTGCAGCACCACGTGCCCAGTGACTTGGAGGGCA...TCTGCTTACCCCGACCAGATCTTGTTTCCTAGATCTTGAGAGGCTAAGAACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | AAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGCGACCCAGAGCCTaGGTTCTTAGCCTCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSILPTQMGTWRLRDPKSLRPRA*VLSLSR Trigger: TCTTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAA...GGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAACCCAGATGGGAACTTaGAGGCTCAGAGACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHSHTHCLQVVPLTQMGT*RLRDPK Trigger: TTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGT...TAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTTCTCCCAACCCAGATaGGAACTTGGAGGCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSQPRWELGGSETPNPWLFSQPR*ELGGSE Trigger: CTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAA...CAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGCCGCTTGTCTCTCCTTaGTCTCCCAGCCTTACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DRTQKVDSPNPDGNLEAQPLVSP*SPSLTP Trigger: GGGAGTAAGGCTGGGAGACCAAGGAGAGACAAGCGG...CTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | AAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCCCTAGAGGATTCCTGTaGATTCCACAGGACCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSILPTQMGTWRLRDPKSPRGFL*IPQDLS Trigger: TGACAGGTCCTGTGGAATTCACAGGAATCCTCTAGG...GGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAAGGGGGCAGAAACCTTTaGACAGGTCCCAGAGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRWELGGSETPNPWLCLKGGRNL*TGPRVF Trigger: AAACACTCTGGGACCTGTGCAAAGGTTTCTGCCCCC...TTTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAACACTCACACACACACTaGCTGCAAGTCGTGCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PRWELGGSETPNPWLCLKHSHTH*LQVVPL Trigger: TAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTG...TTTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | GACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGGCTAGTTCCTCATCCTaGATGTGCAGCTGCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DRTQKVDSPNPDGNLEAQASSSS*MCSCPM Trigger: CATGGGGCAGCTGCACATCCAGGATGAGGAACTAGC...CTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAAACCCAGATGGGAACTTaGAGGCTCAGAGACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRWELGGSETPNPWLCLKTQMGT*RLRDPK Trigger: TTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGT...TTTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCTTACTTGGGGCAGCTTCCCTTCAGCATCTCTTGAACACACTTCTCAACCCTTCAGCATCTCTTaGACACACTTCTCAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLTWGSFPSASLEHTSQPFSIS*THFSTL Trigger: CAGGGTTGAGAAGTGTGTTCAAGAGATGCTGAAGGG...TTGAGAAGTGTGTTCAAGAGATGCTGAAGGGAAGCTGCCCCAAGTAAGGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTGCCTCCACTCTTCCAACTaGCAGAACTCAAAAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: THTHSHTHCLQVVPLALCLHSSN*QNSKSR Trigger: TCGACTTTTTGAGTTCTGTCAGTTGGAAGAGTGGAG...GCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCTTAGCCTCTCAAGATCTAGGAAACAAGATCTGGTCGGGGTAAGCAGACCAGAGTGTTTCCTGTaGCAGGAGAGCGAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVLSLSRSRKQDLVGVSRPECFL*QESEDL Trigger: CAGGTCTTCGCTCTCCTGGCACAGGAAACACTCTGG...TCTGCTTACCCCGACCAGATCTTGTTTCCTAGATCTTGAGAGGCTAAGAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CTAAAAGGGGATGCTCAGCACCTAGAGGATTCCTGTGAATTCCACAGGACCTGTCACTCACACACACACTaGCTGCAAGTCGTGCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKGDAQHLEDSCEFHRTCHSHTH*LQVVPL Trigger: TAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTG...ACAGGTCCTGTGGAATTCACAGGAATCCTCTAGGTGCTGAGCATCCCCTTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | ACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAGTGCCTAAAAGGGGATaGTCAGCACCTAGAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: TQMGTWRLRDPKSLVVPKVPKRG*SAPRGF Trigger: GAATCCTCTAGGTGCTGAGCATCCCCTTTTAGGCAC...TTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCTTAGCCTCTCAAGATCTAGGAAACAAGATCTGGTCGGGGTAAGCAGAGGGGGCAGAAACCTTTaGACAGGTCCCAGAGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WVLSLSRSRKQDLVGVSRGGRNL*TGPRVF Trigger: AAACACTCTGGGACCTGTGCAAAGGTTTCTGCCCCC...TCTGCTTACCCCGACCAGATCTTGTTTCCTAGATCTTGAGAGGCTAAGAACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAAACCAAATCCTTGGTTGTaGCTAAAAGGGGATGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRWELGGSETPNPWLCLKPNPWL*LKGDAQ Trigger: CTGAGCATCCCCTTTTAGGCACAACCAAGGATTTGG...TTTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CCA 90 bp | CCAACTGACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGTTCTCCCAACCCAGATaGGAACTTGGAGGCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTDRTQKVDSPNPDGNLEFSQPR*ELGGSE Trigger: CTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAA...CTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTCAGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | CCAACTGACAGAACTCAAAAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGCCTAGAGGATTCCTGTaGATTCCACAGGACCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTDRTQKVDSPNPDGNLEPRGFL*IPQDLS Trigger: TGACAGGTCCTGTGGAATTCACAGGAATCCTCTAGG...CTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTTTTGAGTTCTGTCAGTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR TCA 90 bp | AAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTCCACTCTTCCAACTaGCAGAACTCAAAAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KVDSPNPDGNLEAQRPQILHSSN*QNSKSR Trigger: TCGACTTTTTGAGTTCTGTCAGTTGGAAGAGTGGAG...GATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 90 bp | AGCGAAGACCTGGGCCCAGCGGCCCCGTTCCTCAGCCTCACTAGCTaGGTGGAGCCGGTAGACGCAGGACAGGCCTGTGAGGAGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SEDLGPAAPFLSLTS*VEPVDAGQACEEQM Trigger: CATCTGCTCCTCACAGGCCTGTCCTGCGTCTACCGGCTCCACGCAGCTAGTGAGGCTGAGGAACGGGGCCGCTGGGCCCAGGTCTTCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 90 bp | TGCTGCAGCCACTGCTCAGTGCCCTCCAAGTCACTGGGCACGTGGTaGTGCAGGAGGAGTCTGAGTCGGCGGCCTGGGTGTGTGGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCSHCSVPSKSLGTW*CRRSLSRRPGCVDA Trigger: AGCGTCCACACACCCAGGCCGCCGACTCAGACTCCTCCTGCAGCACCACGTGCCCAGTGACTTGGAGGGCACTGAGCAGTGGCTGCAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 90 bp | GTCCTGGGGGCAGAAACCTTTGCACAGGTCCCAGAGTGTTTCCTGTaGCAGGAGAGCGAAGACCTGGGCCCAGCGGCCCCGTTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLGAETFAQVPECFL*QESEDLGPAAPFLS Trigger: GCTGAGGAACGGGGCCGCTGGGCCCAGGTCTTCGCTCTCCTGGCACAGGAAACACTCTGGGACCTGTGCAAAGGTTTCTGCCCCCAGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS TCA 90 bp | CAGTGCCCTCCAAGTCACTGGGCACGTGGTGCTGCAGGAGGAGTCTaGGTCGGCGGCCTGGGTGTGTGGACGCTAGTTCCTCATCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QCPPSHWARGAAGGV*VGGLGVWTLVPHPG Trigger: TCCAGGATGAGGAACTAGCGTCCACACACCCAGGCCGCCGACTCAGACTCCTCCTGCAGCACCACGTGCCCAGTGACTTGGAGGGCACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 90 bp | AAGTCCCAAGTGCTAAGAGGAGGCCCCTTCCGCAGGTCCTGGAGCTaGTGCAGCCACTGCTCAGTGCCCTCCAAGTCACTGGGCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSQVLRGGPFRRSWS*CSHCSVPSKSLGTW Trigger: CCACGTGCCCAGTGACTTGGAGGGCACTGAGCAGTGGCTGCAGCAGCTCCAGGACCTGCGGAAGGGGCCTCCTCTTAGCACTTGGGACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS CCA 90 bp | AGTCTGAGTCGGCGGCCTGGGTGTGTGGACGCTAGTTCCTCATCCTaGATGTGCAGCTGCCCCATGACATCCAGCTCCAGCCCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSRRPGCVDASSSS*MCSCPMTSSSSPAQ Trigger: CTGGGCTGGGCTGGAGCTGGATGTCATGGGGCAGCTGCACATCCAGGATGAGGAACTAGCGTCCACACACCCAGGCCGCCGACTCAGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | GCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAACTGACCAGGCCTTACTaGGGGCAGCTTCCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AHSLRTPCDPEPGFLASQLTRPY*GQLPFS Trigger: GCTGAAGGGAAGCTGCCCCAAGTAAGGCCTGGTCAG...TTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | CTGCAAGTCGTGCCCTTAGCTCTGTGCCCACTCCTTGCGCACTCCTTGCGACCCTGGGGGCAGAAACCTTaGCACAGGTCCCAGAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQVVPLALCPLLAHSLRPWGQKP*HRSQSV Trigger: AACACTCTGGGACCTGTGCAAAGGTTTCTGCCCCCA...GGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAGCTAAGGGCACGACTTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | GAAACAAGATCTGGTCGGGGTAAGCAGAGAGGGGGTGTCCAGGGTGCAAGCCAACTCCTTGCGCACTCCTaGCGACCCAGAGCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ETRSGRGKQRGGVQGASQLLAHS*RPRAWV Trigger: AACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAG...TTGGCTTGCACCCTGGACACCCCCTCTCTGCTTACCCCGACCAGATCTTGTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | GGTGAAAAGAATCAGATGCCAGACAGAAGCCCCTGCGCAAGATGGGTCTGCCTGCCAGCCCACCTCCGCTaGTCTCTCCTTGGTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GEKNQMPDRSPCARWVCLPAHLR*SLLGLP Trigger: TGGGAGACCAAGGAGAGACAAGCGGAGGTGGGCTGG...CAGGCAGACCCATCTTGCGCAGGGGCTTCTGTCTGGCATCTGATTCTTTTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | AAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCCTCTGTGCCCACTCCTaGCGCACTCCTTGCGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSILPTQMGTWRLRDPKSLCAHS*RTPCDP Trigger: TGGGTCGCAAGGAGTGCGCAAGGAGTGGGCACAGAG...GGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | GAAACAAGATCTGGTCGGGGTAAGCAGAGAGGGGGTGTCCAGGGTGCAAGCCAATCCGCTTGTCTCTCCTaGGTCTCCCAGCCTTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ETRSGRGKQRGGVQGASQSACLS*VSQPYS Trigger: GGAGTAAGGCTGGGAGACCAAGGAGAGACAAGCGGA...TTGGCTTGCACCCTGGACACCCCCTCTCTGCTTACCCCGACCAGATCTTGTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | ACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCTTGGTTGTGCCTAAACTCCTTGCGCACTCCTaGCGACCCAGAGCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TQMGTWRLRDPKSLVVPKLLAHS*RPRAWV Trigger: AACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAG...TTTAGGCACAACCAAGGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | AAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCCCTGACCAGGCCTTACTaGGGGCAGCTTCCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSILPTQMGTWRLRDPKSLTRPY*GQLPFS Trigger: GCTGAAGGGAAGCTGCCCCAAGTAAGGCCTGGTCAG...GGATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | GCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAGTATTCACCCGACGCTaGTTGAGATATTGCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AHSLRTPCDPEPGFLASQVFTRR*LRYCLP Trigger: AGGGAGGCAATATCTCAACAAGCGTCGGGTGAATAC...TTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | GCCCACTCCTTGCGCACTCCTTGCGACCCAGAGCCTGGGTTCTTAGCCTCTCAAACGCTTGTTGAGATATaGCCTCCCTACCCCAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AHSLRTPCDPEPGFLASQTLVEI*PPYPKR Trigger: TCTTTTGGGGTAGGGAGGCAATATCTCAACAAGCGT...TTGAGAGGCTAAGAACCCAGGCTCTGGGTCGCAAGGAGTGCGCAAGGAGTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | ACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGCTCTGTGCCCTTCACCCGACGCTTGTaGAGATATTGCCTCCCTACC | + |
|
Preference number: 5 (lower is better) Translates to: THTLTHTLPASRALSSVPFTRRL*RYCLPT Trigger: GGTAGGGAGGCAATATCTCAACAAGCGTCGGGTGAA...GGGCACAGAGCTAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 90 bp | AAATGGCTACCACCAGGCAAACCAGGAACTGCAGGGTCGCAGCCATaGTCAACCACGTCCTCTGAGTCTCACTCTGTTCAGCAGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KWLPPGKPGTAGSQP*STTSSESHSVQQFS Trigger: AGAGAACTGCTGAACAGAGTGAGACTCAGAGGACGTGGTTGAGCATGGCTGCGACCCTGCAGTTCCTGGTTTGCCTGGTGGTAGCCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCTTAGCCTCTCAAGATCTAGGAAACAAGATCTGGTCGGGGTAAGCAGACCAGCCCACCTCCGCTaGTCTCTCCTTGGTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WVLSLSRSRKQDLVGVSRPAHLR*SLLGLP Trigger: TGGGAGACCAAGGAGAGACAAGCGGAGGTGGGCTGG...TCTGCTTACCCCGACCAGATCTTGTTTCCTAGATCTTGAGAGGCTAAGAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | CCAGGCCTTACTTGGGGCAGCTTCCCTTCAGCATCTCTTGAACACACTTCTCAATGGGGGCAGAAACCTTaGCACAGGTCCCAGAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGLTWGSFPSASLEHTSQWGQKP*HRSQSV Trigger: AACACTCTGGGACCTGTGCAAAGGTTTCTGCCCCCA...TTGAGAAGTGTGTTCAAGAGATGCTGAAGGGAAGCTGCCCCAAGTAAGGCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | CTAAAAGGGGATGCTCAGCACCTAGAGGATTCCTGTGAATTCCACAGGACCTGTTCCGCTTGTCTCTCCTaGGTCTCCCAGCCTTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKGDAQHLEDSCEFHRTCSACLS*VSQPYS Trigger: GGAGTAAGGCTGGGAGACCAAGGAGAGACAAGCGGA...ACAGGTCCTGTGGAATTCACAGGAATCCTCTAGGTGCTGAGCATCCCCTTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACTCACACACACACTGCCTGCAAGTCGTGCCCTTAGTATTCACCCGACGCTaGTTGAGATATTGCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHSHTHCLQVVPLVFTRR*LRYCLP Trigger: AGGGAGGCAATATCTCAACAAGCGTCGGGTGAATAC...TAAGGGCACGACTTGCAGGCAGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTCGATTCTCCCAACCCAGATGGGAACTTGGAGGCTCAGAGACCCCAAATCACGCTTGTTGAGATATaGCCTCCCTACCCCAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KVDSPNPDGNLEAQRPQITLVEI*PPYPKR Trigger: TCTTTTGGGGTAGGGAGGCAATATCTCAACAAGCGT...GATTTGGGGTCTCTGAGCCTCCAAGTTCCCATCTGGGTTGGGAGAATCGACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 72 bp | CACTGCTCAGTGCCCTCCAAGTCACTGGGCACGTGGTaGTGCAGGAGGAGTCTGAGTCGGCGGCCTGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HCSVPSKSLGTW*CRRSLSRRPGC Trigger: ACACCCAGGCCGCCGACTCAGACTCCTCCTGCAGCACCACGTGCCCAGTGACTTGGAGGGCACTGAGCAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS TCA 72 bp | CCAAGTCACTGGGCACGTGGTGCTGCAGGAGGAGTCTaGGTCGGCGGCCTGGGTGTGTGGACGCTAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSHWARGAAGGV*VGGLGVWTLVP Trigger: AGGAACTAGCGTCCACACACCCAGGCCGCCGACTCAGACTCCTCCTGCAGCACCACGTGCCCAGTGACTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 72 bp | GTGCTAAGAGGAGGCCCCTTCCGCAGGTCCTGGAGCTaGTGCAGCCACTGCTCAGTGCCCTCCAAGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VLRGGPFRRSWS*CSHCSVPSKSL Trigger: CAGTGACTTGGAGGGCACTGAGCAGTGGCTGCAGCAGCTCCAGGACCTGCGGAAGGGGCCTCCTCTTAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 72 bp | GCAGAAACCTTTGCACAGGTCCCAGAGTGTTTCCTGTaGCAGGAGAGCGAAGACCTGGGCCCAGCGGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AETFAQVPECFL*QESEDLGPAAP Trigger: CGGGGCCGCTGGGCCCAGGTCTTCGCTCTCCTGGCACAGGAAACACTCTGGGACCTGTGCAAAGGTTTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS CCA 72 bp | CGGCGGCCTGGGTGTGTGGACGCTAGTTCCTCATCCTaGATGTGCAGCTGCCCCATGACATCCAGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRPGCVDASSSS*MCSCPMTSSSS Trigger: GCTGGAGCTGGATGTCATGGGGCAGCTGCACATCCAGGATGAGGAACTAGCGTCCACACACCCAGGCCGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 72 bp | CCTGGGTGTGTGGACGCTAGTTCCTCATCCTGGATGTaGAGCTGCCCCATGACATCCAGCTCCAGCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGCVDASSSSWM*SCPMTSSSSPA Trigger: GGCTGGGCTGGAGCTGGATGTCATGGGGCAGCTGCACATCCAGGATGAGGAACTAGCGTCCACACACCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 72 bp | TGTGTGGACGCTAGTTCCTCATCCTGGATGTGCAGCTaGCCCATGACATCCAGCTCCAGCCCAGCCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CVDASSSSWMCS*PMTSSSSPAQS Trigger: GCTCTGGGCTGGGCTGGAGCTGGATGTCATGGGGCAGCTGCACATCCAGGATGAGGAACTAGCGTCCACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||
| CDS GCA 72 bp | CCACCAGGCAAACCAGGAACTGCAGGGTCGCAGCCATaGTCAACCACGTCCTCTGAGTCTCACTCTGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PPGKPGTAGSQP*STTSSESHSVQ Trigger: CTGAACAGAGTGAGACTCAGAGGACGTGGTTGAGCATGGCTGCGACCCTGCAGTTCCTGGTTTGCCTGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538490.3 ENST00000644402.4 |
||