RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM180A (Homo sapiens)

Ensembl gene IDs: ENSG00000189320

Ensembl transcript IDs: ENST00000338588.8, ENST00000415751.1, ENST00000435869.1, ENST00000444083.5

Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGAGGCGTCTTaGATGACCATTCCAGCCCTTTCTTCCAGCCCAGGTCACATGATG +
Preference number: 1 (lower is better)
Translates to: NSACHRQTILPMEAS*MTIPALSSSPGHMM
Trigger: CATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR TCA 90 bp ATGACCATTCCAGCCCTTTCTTCCAGCCCAGGTCACATGATGGCATaGATCAGATGTGTCTTCCAGGAAACTACAAGGAGAAAAGAGCAT +
Preference number: 1 (lower is better)
Translates to: MTIPALSSSPGHMMA*IRCVFQETTRRKEH
Trigger: ATGCTCTTTTCTCCTTGTAGTTTCCTGGAAGACACATCTGATTCATGCCATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR TCA 90 bp AGACCATTGGACCTGCAGAAATACTTTGATTTGTTAGATTCAAGGTaGGGTGACAGAGCAATGAAGTCTGCAGCAGTTAAATGTCTGTTG +
Preference number: 1 (lower is better)
Translates to: RPLDLQKYFDLLDSR*GDRAMKSAAVKCLL
Trigger: CAACAGACATTTAACTGCTGCAGACTTCATTGCTCTGTCACCTCACCTTGAATCTAACAAATCAAAGTATTTCTGCAGGTCCAATGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR TCA 90 bp TCCAGAATACAATGCTCAAGAAATGTAAGCCAGATCCCGCTTGTATaGGGTATCTTAAGTAGTCAGACTCTCAAAAACAGAAAGCAGAAT +
Preference number: 1 (lower is better)
Translates to: SRIQCSRNVSQIPLV*GILSSQTLKNRKQN
Trigger: ATTCTGCTTTCTGTTTTTGAGAGTCTGACTACTTAAGATACCTCATACAAGCGGGATCTGGCTTACATTTCTTGAGCATTGTATTCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR GCA 90 bp TTGAGTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATTACTGTGCTGGTCCCTaGTCTGAGGTCCTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: LSVWPLLWVEAYQNSACHYCAGP*SEVLVW
Trigger: CCACACCAGGACCTCAGAGCAGGGACCAGCACAGTA...ATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
3UTR-3UTR TCA 90 bp CATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCGGTCACATGATGGCATaGATCAGATGTGTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: HSAHGGVLNDHSSPFFQPGHMMA*IRCVFQ
Trigger: CTGGAAGACACATCTGATTCATGCCATCATGTGACC...GGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR-3UTR TCA 90 bp GTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAACCAGCCCAGGTCACATaGTGGCATGAATCAGATGTG +
Preference number: 2 (lower is better)
Translates to: VWPLLWVEAYQNSACHRQPAQVT*WHESDV
Trigger: CACATCTGATTCATGCCATCATGTGACCTGGGCTGG...TTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
3UTR-3UTR TCA 90 bp GTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAATCGGGGTTACTGTTTaGTCTCTGCTGCTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: VWPLLWVEAYQNSACHRQIGVTV*SLLLCV
Trigger: GACACAGAGCAGCAGAGATCAAACAGTAACCCCGAT...TTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
3UTR-3UTR TCA 90 bp GCAAACCATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCATCGGGGTTACTGTTTaGTCTCTGCTGCTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: ANHSAHGGVLNDHSSPFFIGVTV*SLLLCV
Trigger: GACACAGAGCAGCAGAGATCAAACAGTAACCCCGAT...GAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR-3UTR GCA 90 bp TACAAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCATACTGTGCTGGTCCCTaGTCTGAGGTCCTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: YKEKRASGLLFDLCCSVSYCAGP*SEVLVW
Trigger: CCACACCAGGACCTCAGAGCAGGGACCAGCACAGTA...TGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR-3UTR CCA 90 bp CATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCAGAATGAAGACTTTCTaGATTACTGTGCTGGTCCCT +
Preference number: 2 (lower is better)
Translates to: HSAHGGVLNDHSSPFFQPRMKTF*ITVLVP
Trigger: AGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCT...GGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR-3UTR TCA 90 bp TCGGTGGGTATAGAACTTCAGAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTCCCATGGAGGCGTCTTaGATGACCATTCCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: SVGIELQNYKMRKFRGSVPMEAS*MTIPAL
Trigger: AAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGG...AACAGACCCCCGGAACTTTCTCATCTTGTAATTCTGAAGTTCTATACCCACCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp CAGAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTCCAGCCCAGGTCACATaGTGGCATGAATCAGATGTG +
Preference number: 2 (lower is better)
Translates to: QNYKMRKFRGSVSQHAWSPAQVT*WHESDV
Trigger: CACATCTGATTCATGCCATCATGTGACCTGGGCTGG...ACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR GCA 90 bp TGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAGGAATACTGTGCTGGTCCCTaGTCTGAGGTCCTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: CTIRPVVLLQNSTHFSEEYCAGP*SEVLVW
Trigger: CCACACCAGGACCTCAGAGCAGGGACCAGCACAGTA...TTCCTCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp GTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAAAATGGAGTAGAGAATaGAGACTTTCTGGATTACTG +
Preference number: 2 (lower is better)
Translates to: VWPLLWVEAYQNSACHRQKWSRE*RLSGLL
Trigger: CAGTAATCCAGAAAGTCTTCATTCTCTACTCCATTT...TTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
3UTR-3UTR TCA 90 bp ATCTTAAGTAGTCAGACTCTCAAAAACAGAAAGCAGAATAATGGTGCCAAGAGCCCCATGGAGGCGTCTTaGATGACCATTCCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: ILSSQTLKNRKQNNGAKSPMEAS*MTIPAL
Trigger: AAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGG...GCTCTTGGCACCATTATTCTGCTTTCTGTTTTTGAGAGTCTGACTACTTAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR GCA 90 bp CAGAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTCTGTTTGATCTCTGCTaGTCTGTGTCAGCGGTAAGA +
Preference number: 2 (lower is better)
Translates to: QNYKMRKFRGSVSQHAWSLFDLC*SVSAVR
Trigger: TCTTACCGCTGACACAGAGCAGCAGAGATCAAACAG...ACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGAAATGGAGTAGAGAATaGAGACTTTCTGGATTACTG +
Preference number: 2 (lower is better)
Translates to: KEKRASGLLFDLCCSVSAKWSRE*RLSGLL
Trigger: CAGTAATCCAGAAAGTCTTCATTCTCTACTCCATTT...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR-3UTR TCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCTGGAGGCGTCTTGAATaGCCATTCCAGCCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTWRRLE*PFQPFL
Trigger: AAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCA...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCGCCACTGCTCTGGGTTaGAGCATATCAGAATTCTGC +
Preference number: 2 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTATALG*SISEFC
Trigger: GCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGC...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338588.8
3UTR-3UTR CCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCGGTGGCTCACGCTCTaGGTTGAAGCATATCAGAAT +
Preference number: 2 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTRWLTL*VEAYQN
Trigger: ATTCTGATATGCTTCAACCCAGAGCGTGAGCCACCG...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444083.5
3UTR-3UTR TCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCAGATTCAAGGTGAGGTaGCAGAGCAATGAAGTCTGC +
Preference number: 2 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTRFKVR*QSNEVC
Trigger: GCAGACTTCATTGCTCTGTCACCTCACCTTGAATCT...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR GCA 90 bp GTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTATAGGCAAACCATTCTaGCCATGGAGGCGTCTTGAA +
Preference number: 2 (lower is better)
Translates to: VQQVYNKTSSSPSELYPFIGKPF*PWRRLE
Trigger: TTCAAGACGCCTCCATGGGCAGAATGGTTTGCCTAT...AAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR CAA 90 bp TTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTaGCTGGTCTCTGTAAATGGAGTAGAGAATGAAGACTTTCTGGAT +
Preference number: 2 (lower is better)
Translates to: LLFDLCCSVSAVRVL*LVSVNGVENEDFLD
Trigger: ATCCAGAAAGTCTTCATTCTCTACTCCATTTACAGAGACCAGCAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR-3UTR TCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCTTCAGAATTACAAGATaGGAAAGTTCCGGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTFRITR*ESSGGL
Trigger: CAGACCCCCGGAACTTTCTCATCTTGTAATTCTGAA...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR GCA 90 bp GTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTACTGTTTGATCTCTaGTGCTCTGTGTCAGCGGTA +
Preference number: 2 (lower is better)
Translates to: VQQVYNKTSSSPSELYPFLLFDL*CSVSAV
Trigger: TACCGCTGACACAGAGCAGCAGAGATCAAACAGTAA...AAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR CCA 90 bp ATCTTAAGTAGTCAGACTCTCAAAAACAGAAAGCAGAATAATGGTGCCAAGAGCGTGTGGCCACTGCTCTaGGTTGAAGCATATCAGAAT +
Preference number: 2 (lower is better)
Translates to: ILSSQTLKNRKQNNGAKSVWPLL*VEAYQN
Trigger: ATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC...GCTCTTGGCACCATTATTCTGCTTTCTGTTTTTGAGAGTCTGACTACTTAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338588.8
3UTR-3UTR CCA 90 bp AAAGAGGAGTTGTTCGGTGGGTATAGAACTTCAGAATTACAAGATGAGAAAGTTAAAGTTTTTAGATCCTaGGCCAGGCACGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: KEELFGGYRTSELQDEKVKVFRS*ARHGGS
Trigger: TGAGCCACCGTGCCTGGCCCAGGATCTAAAAACTTT...AACTTTCTCATCTTGTAATTCTGAAGTTCTATACCCACCGAACAACTCCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp AAAGAGGAGTTGTTCGGTGGGTATAGAACTTCAGAATTACAAGATGAGAAAGTTGGTCACATGATGGCATaGATCAGATGTGTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: KEELFGGYRTSELQDEKVGHMMA*IRCVFQ
Trigger: CTGGAAGACACATCTGATTCATGCCATCATGTGACC...AACTTTCTCATCTTGTAATTCTGAAGTTCTATACCCACCGAACAACTCCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCTCTGTTGATGTCTCTTaGGTGACATTGGAGATAGCT +
Preference number: 2 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTSVDVS*VTLEIA
Trigger: AGCTATCTCCAATGTCACTCAAGAGACATCAACAGA...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp TGTTTCACAACATGCATGGAGTTAACACTGCTGTACCATATGCTTAAAAATGGTGAGGTGACAGAGCAATaGAGTCTGCAGCAGTTAAAT +
Preference number: 2 (lower is better)
Translates to: CFTTCMELTLLYHMLKNGEVTEQ*SLQQLN
Trigger: ATTTAACTGCTGCAGACTTCATTGCTCTGTCACCTC...ACCATTTTTAAGCATATGGTACAGCAGTGTTAACTCCATGCATGTTGTGAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp TGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAGGAATTGTTAGATTCAAGGTaGGGTGACAGAGCAATGAAG +
Preference number: 2 (lower is better)
Translates to: CTIRPVVLLQNSTHFSEELLDSR*GDRAMK
Trigger: CTTCATTGCTCTGTCACCTCACCTTGAATCTAACAA...TTCCTCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp GAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTTACCTGCAGAAATACTTTaGTTTGTTAGATTCAAGGTG +
Preference number: 2 (lower is better)
Translates to: ELQDEKVPGVCFTTCMELPAEIL*FVRFKV
Trigger: CACCTTGAATCTAACAAATCAAAGTATTTCTGCAGG...TAACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp TGTTTCACAACATGCATGGAGTTAACACTGCTGTACCATATGCTTAAAAATGGTTCTGTTGATGTCTCTTaGGTGACATTGGAGATAGCT +
Preference number: 2 (lower is better)
Translates to: CFTTCMELTLLYHMLKNGSVDVS*VTLEIA
Trigger: AGCTATCTCCAATGTCACTCAAGAGACATCAACAGA...ACCATTTTTAAGCATATGGTACAGCAGTGTTAACTCCATGCATGTTGTGAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR TCA 90 bp TGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAGGAAAAATGGAGTAGAGAATaGAGACTTTCTGGATTACTG +
Preference number: 2 (lower is better)
Translates to: CTIRPVVLLQNSTHFSEEKWSRE*RLSGLL
Trigger: CAGTAATCCAGAAAGTCTTCATTCTCTACTCCATTT...TTCCTCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR GCA 90 bp TGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAGGAATTAGACCATTGGACCTaGAGAAATACTTTGATTTGT +
Preference number: 2 (lower is better)
Translates to: CTIRPVVLLQNSTHFSEELDHWT*RNTLIC
Trigger: ACAAATCAAAGTATTTCTGCAGGTCCAATGGTCTAA...TTCCTCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR CAA 90 bp GTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCGCCCATGGAGGCGTCTaGAATGACCATTCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: VCGHCSGLKHIRILPAIGAHGGV*NDHSSP
Trigger: AGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGC...GCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
3UTR CCA 72 bp GCCTCTGTGCCCGGCCTGTTCTCACTCTTGAGTGTGTaGCCACTGCTCTGGGTTGAAGCATATCAGAATTCT +
Preference number: 3 (lower is better)
Translates to: ASVPGLFSLLSV*PLLWVEAYQNS
Trigger: AGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACACTCAAGAGTGAGAACAGGCCGGGCACAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415751.1
3UTR TCA 72 bp ATAGGCAAACCATTCTGCCCATGGAGGCGTCTTGAATaGCCATTCCAGCCCTTTCTTCCAGCCCAGGTCACA +
Preference number: 3 (lower is better)
Translates to: IGKPFCPWRRLE*PFQPFLPAQVT
Trigger: TGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATGGTTTGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR CCA 72 bp CACGGTGGCTCACGCCTGTTCTCACTCTTGAGTGTGTaGCCACTGCTCTGGGTTGAAGCATATCAGAATTCT +
Preference number: 3 (lower is better)
Translates to: HGGSRLFSLLSV*PLLWVEAYQNS
Trigger: AGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACACTCAAGAGTGAGAACAGGCGTGAGCCACCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338588.8
3UTR-3UTR CAA 90 bp TGTCTCTTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACGCCCATGGAGGCGTCTaGAATGACCATTCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: CLLSDIGDSCEDANDGGNAHGGV*NDHSSP
Trigger: AGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGC...GTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR TCA 72 bp CCAGCCCTTTCTTCCAGCCCAGGTCACATGATGGCATaGATCAGATGTGTCTTCCAGGAAACTACAAGGAGA +
Preference number: 3 (lower is better)
Translates to: PALSSSPGHMMA*IRCVFQETTRR
Trigger: TCTCCTTGTAGTTTCCTGGAAGACACATCTGATTCATGCCATCATGTGACCTGGGCTGGAAGAAAGGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR-3UTR CAA 90 bp TGTCTCTTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACGGCTCACGCTCTGGGTaGAAGCATATCAGAATTCTG +
Preference number: 3 (lower is better)
Translates to: CLLSDIGDSCEDANDGGNGSRSG*KHIRIL
Trigger: CAGAATTCTGATATGCTTCAACCCAGAGCGTGAGCC...GTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444083.5
3UTR-3UTR CAA 90 bp TTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTAGAAGGCCACTGCTCTGGGTaGAAGCATATCAGAATTCTG +
Preference number: 3 (lower is better)
Translates to: LSDIGDSCEDANDGGNLEGHCSG*KHIRIL
Trigger: CAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCC...TTCTAAGTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338588.8
3UTR-3UTR CAA 90 bp CAGAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTGCGGTAAGAGTTTTGTaGCTGGTCTCTGTAAATGGA +
Preference number: 3 (lower is better)
Translates to: QNYKMRKFRGSVSQHAWSAVRVL*LVSVNG
Trigger: TCCATTTACAGAGACCAGCAACAAAACTCTTACCGC...ACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR-3UTR CAA 90 bp TTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTAGAAGCGGTAAGAGTTTTGTaGCTGGTCTCTGTAAATGGA +
Preference number: 3 (lower is better)
Translates to: LSDIGDSCEDANDGGNLEAVRVL*LVSVNG
Trigger: TCCATTTACAGAGACCAGCAACAAAACTCTTACCGC...TTCTAAGTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR TCA 72 bp AAACTACAAGGAGAAAAGAGCATCGGGGTTACTGTTTaGTCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTT +
Preference number: 3 (lower is better)
Translates to: KLQGEKSIGVTV*SLLLCVSGKSF
Trigger: AAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTTGTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
3UTR TCA 72 bp GACCTGCAGAAATACTTTGATTTGTTAGATTCAAGGTaGGGTGACAGAGCAATGAAGTCTGCAGCAGTTAAA +
Preference number: 3 (lower is better)
Translates to: DLQKYFDLLDSR*GDRAMKSAAVK
Trigger: TTTAACTGCTGCAGACTTCATTGCTCTGTCACCTCACCTTGAATCTAACAAATCAAAGTATTTCTGCAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR TCA 72 bp CAATGCTCAAGAAATGTAAGCCAGATCCCGCTTGTATaGGGTATCTTAAGTAGTCAGACTCTCAAAAACAGA +
Preference number: 3 (lower is better)
Translates to: QCSRNVSQIPLV*GILSSQTLKNR
Trigger: TCTGTTTTTGAGAGTCTGACTACTTAAGATACCTCATACAAGCGGGATCTGGCTTACATTTCTTGAGCATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp CATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCTGGAGAGGCTGGCGCTaGGCCGGCGGATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HSAHGGVLNDHSSPFFQPWRGWR*AGGCLG
Trigger: TCCCAGACATCCGCCGGCTCAGCGCCAGCCTCTCCA...GGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp GTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCGACGGTGCGGAAGTCTaGGGCCTTCCGCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VCGHCSGLKHIRILPAIGDGAEV*GLPQGG
Trigger: GCCTCCTTGCGGAAGGCCTCAGACTTCCGCACCGTC...GCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR TCA 90 bp GCAAACCATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCTGGAGAGGCTGGCGCTaGGCCGGCGGATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ANHSAHGGVLNDHSSPFFWRGWR*AGGCLG
Trigger: TCCCAGACATCCGCCGGCTCAGCGCCAGCCTCTCCA...GAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATGGTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CCA 90 bp CATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCCTGGGCCAGGCACGGTaGCTCACGCTCTGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: HSAHGGVLNDHSSPFFQPLGQAR*LTLWVE
Trigger: TTCAACCCAGAGCGTGAGCCACCGTGCCTGGCCCAG...GGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444083.5
CDS-3UTR TCA 90 bp GTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAGACGGTGCGGAAGTCTaGGGCCTTCCGCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VWPLLWVEAYQNSACHRQDGAEV*GLPQGG
Trigger: GCCTCCTTGCGGAAGGCCTCAGACTTCCGCACCGTC...TTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR TCA 90 bp GCAAACCATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCGACGGTGCGGAAGTCTaGGGCCTTCCGCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ANHSAHGGVLNDHSSPFFDGAEV*GLPQGG
Trigger: GCCTCCTTGCGGAAGGCCTCAGACTTCCGCACCGTC...GAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATGGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp CATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCAGGTACTCCCGGCTGTaGGGAGCGCATCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: HSAHGGVLNDHSSPFFQPRYSRL*GAHQVV
Trigger: CACGACTTGATGCGCTCCTCACAGCCGGGAGTACCT...GGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CCA 90 bp GTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCGAGCCGGCGGATGTCTaGGATGCTCTTGGGGATGAC +
Preference number: 4 (lower is better)
Translates to: VCGHCSGLKHIRILPAIGEPADV*DALGDD
Trigger: GTCATCCCCAAGAGCATCCCAGACATCCGCCGGCTC...GCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR CCA 90 bp GGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCAGGTCACATGATCCTGCTCTGAGGTCCTaGTGTGGGCCAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGVLNDHSSPFFQPRSHDPALRS*CGPVSQ
Trigger: CTGAGAGACTGGCCCACACCAGGACCTCAGAGCAGG...ATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp TTGAGTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATGCCCAGATGTCCTTCTaGTGGCCGTGGGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSVWPLLWVEAYQNSACHAQMSF*WPWDRA
Trigger: AGCCCTGTCCCACGGCCATCAGAAGGACATCTGGGC...ATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR GCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGCGTGGGACAGGGCTGTaGGGTAGGCTGTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: KEKRASGLLFDLCCSVSARGTGL*GRLCRP
Trigger: TGGCCTACACAGCCTACCGCACAGCCCTGTCCCACG...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp GACCATTCCAGCCCTTTCTTCCAGCCCAGGTCACATGATGGCATGAATCAGATGCCAGCTCCTCGTCCTTaGTGGAGATCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: DHSSPFFQPRSHDGMNQMPAPRP*WRSAGQ
Trigger: CTGACCTGCAGATCTCCATCAAGGACGAGGAGCTGG...CATCTGATTCATGCCATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGAGGTACTCCCGGCTGTaGGGAGCGCATCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWRYSRL*GAHQVV
Trigger: CACGACTTGATGCGCTCCTCACAGCCGGGAGTACCT...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp GCAAACCATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCGTTGTTGCAGACGGTaGGGAAGTCTGAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ANHSAHGGVLNDHSSPFFRCCRR*GSLRPS
Trigger: GGAAGGCCTCAGACTTCCGCACCGTCTGCAACAACG...GAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATGGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp GACCATTCCAGCCCTTTCTTCCAGCCCAGGTCACATGATGGCATGAATCAGATGTACTGTGCTGGTCCCTaGTCTGAGGTCCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DHSSPFFQPRSHDGMNQMYCAGP*SEVLVW
Trigger: CCACACCAGGACCTCAGAGCAGGGACCAGCACAGTA...CATCTGATTCATGCCATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp GCAAACCATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCTACTGTGCTGGTCCCTaGTCTGAGGTCCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ANHSAHGGVLNDHSSPFFYCAGP*SEVLVW
Trigger: CCACACCAGGACCTCAGAGCAGGGACCAGCACAGTA...GAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATGGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CCA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGCTGAAGGCTGCGTCCTaGGTGGGACAGGAGTCGGTA +
Preference number: 4 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWLKAAS*VGQESV
Trigger: TACCGACTCCTGTCCCACCCAGGACGCAGCCTTCAG...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR CCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGACCCTCAAGCCCAGTaGAACCCCAGTAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KEKRASGLLFDLCCSVSADPQAQ*NPSSCR
Trigger: CCTGCAGCTACTGGGGTTCCACTGGGCTTGAGGGTC...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR CCA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGGAGCCGGCGGATGTCTaGGATGCTCTTGGGGATGAC +
Preference number: 4 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWEPADV*DALGDD
Trigger: GTCATCCCCAAGAGCATCCCAGACATCCGCCGGCTC...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGTCGTGCCTCAGGGCCTaGAAGAGGCTAACGAGGGAC +
Preference number: 4 (lower is better)
Translates to: KEKRASGLLFDLCCSVSASCLRA*KRLTRD
Trigger: GTCCCTCGTTAGCCTCTTCCAGGCCCTGAGGCACGA...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CCA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGTCTGAGGTCCTGGTGTaGGCCAGTCTCTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWSEVLV*ASLSGR
Trigger: CCTCCCTGAGAGACTGGCCCACACCAGGACCTCAGA...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CCA 90 bp TTGAGTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATTCTGAGGTCCTGGTGTaGGCCAGTCTCTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSVWPLLWVEAYQNSACHSEVLV*ASLSGR
Trigger: CCTCCCTGAGAGACTGGCCCACACCAGGACCTCAGA...ATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR CCA 90 bp TCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTTGAATGGTGCCAAGAGCTaGGGCAGGCAGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SGLLFDLCCSVSAVRVLLNGAKS*GRQGEG
Trigger: CCCTTCCCCCTGCCTGCCCCAGCTCTTGGCACCATT...CAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGCCAGCTCCTCGTCCTTaGTGGAGATCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWPAPRP*WRSAGQ
Trigger: CTGACCTGCAGATCTCCATCAAGGACGAGGAGCTGG...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGGGATGCTCTTGGGGATaGCGTTGTTGCAGACGGTGC +
Preference number: 4 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWGCSWG*RCCRRC
Trigger: GCACCGTCTGCAACAACGTCATCCCCAAGAGCATCC...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGGATGCTCTTGGGGATaGCGTTGTTGCAGACGGTGC +
Preference number: 4 (lower is better)
Translates to: KEKRASGLLFDLCCSVSAGCSWG*RCCRRC
Trigger: GCACCGTCTGCAACAACGTCATCCCCAAGAGCATCC...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp GAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTTATGGAGAGGCTGGCGCTaGGCCGGCGGATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ELQDEKVPGVCFTTCMELWRGWR*AGGCLG
Trigger: TCCCAGACATCCGCCGGCTCAGCGCCAGCCTCTCCA...TAACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGGCCCAGATGTCCTTCTaGTGGCCGTGGGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: NGVENEDFLDYCAGPCSEAQMSF*WPWDRA
Trigger: AGCCCTGTCCCACGGCCATCAGAAGGACATCTGGGC...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp CATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCATCGGGGTTACTGTTTaGTCTCTGCTGCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HSAHGGVLNDHSSPFFQPIGVTV*SLLLCV
Trigger: GACACAGAGCAGCAGAGATCAAACAGTAACCCCGAT...GGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGTCCTCCAGGGAGGTCTaGAGGACTGGGTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: KEKRASGLLFDLCCSVSASSREV*RTGFNG
Trigger: GCCATTGAACCCAGTCCTGCAGACCTCCCTGGAGGA...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGCGTTGTTGCAGACGGTaGGGAAGTCTGAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWRCCRR*GSLRPS
Trigger: GGAAGGCCTCAGACTTCCGCACCGTCTGCAACAACG...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp CCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTGAGCGCATCAAGTCGTaGCTCAGGGCCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PLLWVEAYQNSACHRQTIERIKS*LRAWKR
Trigger: CCTCTTCCAGGCCCTGAGGCACGACTTGATGCGCTC...AATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR CCA 90 bp TGTCTCTTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACCCTGCTCTGAGGTCCTaGTGTGGGCCAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CLLSDIGDSCEDANDGGNPALRS*CGPVSQ
Trigger: CTGAGAGACTGGCCCACACCAGGACCTCAGAGCAGG...GTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CCA 90 bp CATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCAAAGTTTTTAGATCCTaGGCCAGGCACGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: HSAHGGVLNDHSSPFFQPKVFRS*ARHGGS
Trigger: TGAGCCACCGTGCCTGGCCCAGGATCTAAAAACTTT...GGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp GTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCATCGGGGTTACTGTTTaGTCTCTGCTGCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VCGHCSGLKHIRILPAIGIGVTV*SLLLCV
Trigger: GACACAGAGCAGCAGAGATCAAACAGTAACCCCGAT...GCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR TCA 90 bp TTGAGTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATCCCATGGAGGCGTCTTaGATGACCATTCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LSVWPLLWVEAYQNSACHPMEAS*MTIPAL
Trigger: AAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGG...ATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACACTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR TCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGCCTGTTCTCACTCTTaGGTGTGTGGCCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: KEKRASGLLFDLCCSVSAACSHS*VCGHCS
Trigger: AGAGCAGTGGCCACACACTCAAGAGTGAGAACAGGC...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR GCA 90 bp TGTCTCTTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTGGAACCCCAGTAGCTaGAGGTATGCCCGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: CLLSDIGDSCEDANDGGNWNPSS*RYARAV
Trigger: AACGGCACGGGCATACCTGCAGCTACTGGGGTTCCA...GTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAAGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR GCA 90 bp TCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTTGTGGAACCCCAGTAGCTaGAGGTATGCCCGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: SGLLFDLCCSVSAVRVLLWNPSS*RYARAV
Trigger: AACGGCACGGGCATACCTGCAGCTACTGGGGTTCCA...CAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR GCA 90 bp TCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTTGTCCTCCAGGGAGGTCTaGAGGACTGGGTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SGLLFDLCCSVSAVRVLLSSREV*RTGFNG
Trigger: GCCATTGAACCCAGTCCTGCAGACCTCCCTGGAGGA...CAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp CCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCGTTGTTGCAGACGGTaGGGAAGTCTGAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PLLWVEAYQNSACHRQTIRCCRR*GSLRPS
Trigger: GGAAGGCCTCAGACTTCCGCACCGTCTGCAACAACG...AATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR GCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGGAGCGCATCAAGTCGTaGCTCAGGGCCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: NGVENEDFLDYCAGPCSEERIKS*LRAWKR
Trigger: CCTCTTCCAGGCCCTGAGGCACGACTTGATGCGCTC...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGAGGCGTGAGCCTCTGTaGCCGGCCTGTTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: NGVENEDFLDYCAGPCSERREPL*PACSHS
Trigger: AGAGTGAGAACAGGCCGGGCACAGAGGCTCACGCCT...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415751.1
CDS-3UTR CCA 90 bp TTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTAGAAAGGCTGCGTCCTGGGTaGGACAGGAGTCGGTACCTC +
Preference number: 4 (lower is better)
Translates to: LSDIGDSCEDANDGGNLERLRPG*DRSRYL
Trigger: GAGGTACCGACTCCTGTCCCACCCAGGACGCAGCCT...TTCTAAGTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR CCA 90 bp TTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTAGAAGACCTCTTTGGCCGGTaGGCGGCAGGGAAGAGCACA +
Preference number: 4 (lower is better)
Translates to: LSDIGDSCEDANDGGNLEDLFGR*AAGKST
Trigger: TGTGCTCTTCCCTGCCGCCCACCGGCCAAAGAGGTC...TTCTAAGTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGTCGTGCCTCAGGGCCTaGAAGAGGCTAACGAGGGAC +
Preference number: 4 (lower is better)
Translates to: NGVENEDFLDYCAGPCSESCLRA*KRLTRD
Trigger: GTCCCTCGTTAGCCTCTTCCAGGCCCTGAGGCACGA...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CCA 90 bp TACAAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCACCTGCTCTGAGGTCCTaGTGTGGGCCAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: YKEKRASGLLFDLCCSVSPALRS*CGPVSQ
Trigger: CTGAGAGACTGGCCCACACCAGGACCTCAGAGCAGG...TGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp CATTCTGCCCATGGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCTTGTCCTTCAAAAGGTaGAAAATCGACCCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: HSAHGGVLNDHSSPFFQPLSFKR*KIDPQA
Trigger: GGCTTGAGGGTCGATTTTTCACCTTTTGAAGGACAA...GGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp GAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTACAAAGTCTTCTTTCTTaGGGATGCCAGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EKRASGLLFDLCCSVSAVQSLLS*GCQGGW
Trigger: CCAGCCACCCTGGCATCCTCAAGAAAGAAGACTTTG...TACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGCCAGCCCAGGTCACATaGTGGCATGAATCAGATGTG +
Preference number: 4 (lower is better)
Translates to: KEKRASGLLFDLCCSVSAPAQVT*WHESDV
Trigger: CACATCTGATTCATGCCATCATGTGACCTGGGCTGG...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp TGTCTCTTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACGCCTGTTCTCACTCTTaGGTGTGTGGCCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: CLLSDIGDSCEDANDGGNACSHS*VCGHCS
Trigger: AGAGCAGTGGCCACACACTCAAGAGTGAGAACAGGC...GTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAAGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR GCA 90 bp GTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAGTGAGATGATGGAGTaGTTCCCTCCCTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: VCGHCSGLKHIRILPAIGSEMME*FPPFLL
Trigger: CAAAAGGAAGGGAGGGAAGCACTCCATCATCTCACT...GCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR GCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGTACTGTGCTGGTCCCTaGTCTGAGGTCCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: NGVENEDFLDYCAGPCSEYCAGP*SEVLVW
Trigger: CCACACCAGGACCTCAGAGCAGGGACCAGCACAGTA...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp GGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCAGGTCACATGATATAGGCAAACCATTCTaGCCATGGAGGCGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GGVLNDHSSPFFQPRSHDIGKPF*PWRRLE
Trigger: TTCAAGACGCCTCCATGGGCAGAATGGTTTGCCTAT...ATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp TTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTAGAATCTGCAGGTCAGGGCTaGTCTCAAGTTCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSDIGDSCEDANDGGNLESAGQG*SQVRPA
Trigger: TGCTGGCCGAACTTGAGATCAGCCCTGACCTGCAGA...TTCTAAGTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCGCCCAGATGTCCTTCTaGTGGCCGTGGGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTAQMSF*WPWDRA
Trigger: AGCCCTGTCCCACGGCCATCAGAAGGACATCTGGGC...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp GTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAGGTCACATGATGGCATaGATCAGATGTGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VWPLLWVEAYQNSACHRQGHMMA*IRCVFQ
Trigger: CTGGAAGACACATCTGATTCATGCCATCATGTGACC...TTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR TCA 90 bp GGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCAGGTCACATGATGAGGTGACAGAGCAATaGAGTCTGCAGCAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: GGVLNDHSSPFFQPRSHDEVTEQ*SLQQLN
Trigger: ATTTAACTGCTGCAGACTTCATTGCTCTGTCACCTC...ATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp GTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAAGATTCAAGGTGAGGTaGCAGAGCAATGAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VWPLLWVEAYQNSACHRQRFKVR*QSNEVC
Trigger: GCAGACTTCATTGCTCTGTCACCTCACCTTGAATCT...TTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR GCA 90 bp GAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTATCCTTGATGGAGATCTaGAGGTCAGGGCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: EKRASGLLFDLCCSVSAVSLMEI*RSGLIS
Trigger: TGAGATCAGCCCTGACCTGCAGATCTCCATCAAGGA...TACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCGTGGGACAGGGCTGTaGGGTAGGCTGTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTRGTGL*GRLCRP
Trigger: TGGCCTACACAGCCTACCGCACAGCCCTGTCCCACG...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp GTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAATAGGCAAACCATTCTaGCCATGGAGGCGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VWPLLWVEAYQNSACHRQIGKPF*PWRRLE
Trigger: TTCAAGACGCCTCCATGGGCAGAATGGTTTGCCTAT...TTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR CCA 90 bp GAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTTAGAGCCGGCGGATGTCTaGGATGCTCTTGGGGATGAC +
Preference number: 4 (lower is better)
Translates to: ELQDEKVPGVCFTTCMELEPADV*DALGDD
Trigger: GTCATCCCCAAGAGCATCCCAGACATCCGCCGGCTC...TAACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGGTACCTCTCTTCATTTaGCGCTCTCTGGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: NGVENEDFLDYCAGPCSEVPLFI*RSLGLG
Trigger: CCCCAATCCCAGAGAGCGTCAAATGAAGAGAGGTAC...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR TCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGCCAGCCCAGGTCACATaGTGGCATGAATCAGATGTG +
Preference number: 4 (lower is better)
Translates to: NGVENEDFLDYCAGPCSEPAQVT*WHESDV
Trigger: CACATCTGATTCATGCCATCATGTGACCTGGGCTGG...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp GAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGTGAGATGATGGAGTaGTTCCCTCCCTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: EKRASGLLFDLCCSVSAVSEMME*FPPFLL
Trigger: CAAAAGGAAGGGAGGGAAGCACTCCATCATCTCACT...TACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR GCA 90 bp GTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTGAGCGCATCAAGTCGTaGCTCAGGGCCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VQQVYNKTSSSPSELYPFERIKS*LRAWKR
Trigger: CCTCTTCCAGGCCCTGAGGCACGACTTGATGCGCTC...AAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp GTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCGTCTGTTTCACAACATaGATGGAGTTAACACTGCTG +
Preference number: 4 (lower is better)
Translates to: VCGHCSGLKHIRILPAIGVCFTT*MELTLL
Trigger: CAGCAGTGTTAACTCCATGCATGTTGTGAAACAGAC...GCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR GCA 90 bp GGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCAGGTCACATGATGTCTGTTTCACAACATaGATGGAGTTAACACTGCTG +
Preference number: 4 (lower is better)
Translates to: GGVLNDHSSPFFQPRSHDVCFTT*MELTLL
Trigger: CAGCAGTGTTAACTCCATGCATGTTGTGAAACAGAC...ATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCGACCCTCAAGCCCAGTaGAACCCCAGTAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTDPQAQ*NPSSCR
Trigger: CCTGCAGCTACTGGGGTTCCACTGGGCTTGAGGGTC...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR CCA 90 bp GTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTCGTGCCTCAGGGCCTaGAAGAGGCTAACGAGGGAC +
Preference number: 4 (lower is better)
Translates to: VQQVYNKTSSSPSELYPFSCLRA*KRLTRD
Trigger: GTCCCTCGTTAGCCTCTTCCAGGCCCTGAGGCACGA...AAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CCA 90 bp TTGAGTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATGTGTGGCCACTGCTCTaGGTTGAAGCATATCAGAAT +
Preference number: 4 (lower is better)
Translates to: LSVWPLLWVEAYQNSACHVWPLL*VEAYQN
Trigger: ATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC...ATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR TCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCGGATGCTCTTGGGGATaGCGTTGTTGCAGACGGTGC +
Preference number: 4 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTGCSWG*RCCRRC
Trigger: GCACCGTCTGCAACAACGTCATCCCCAAGAGCATCC...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp CAGAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTCAAAGTCTTCTTTCTTaGGGATGCCAGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QNYKMRKFRGSVSQHAWSQSLLS*GCQGGW
Trigger: CCAGCCACCCTGGCATCCTCAAGAAAGAAGACTTTG...ACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp CAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAAGGTACTCCCGGCTGTaGGGAGCGCATCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: QVYNKTSSSPSELYPFFRRYSRL*GAHQVV
Trigger: CACGACTTGATGCGCTCCTCACAGCCGGGAGTACCT...TCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp TCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTTGGGTCACATGATGGCATaGATCAGATGTGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SGLLFDLCCSVSAVRVLLGHMMA*IRCVFQ
Trigger: CTGGAAGACACATCTGATTCATGCCATCATGTGACC...CAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGTGGAGGCGTCTTGAATaGCCATTCCAGCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NGVENEDFLDYCAGPCSEWRRLE*PFQPFL
Trigger: AAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCA...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp TACAAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCCACTGCTCTGGGTTaGAGCATATCAGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: YKEKRASGLLFDLCCSVSATALG*SISEFC
Trigger: GCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGC...TGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR GCA 90 bp TCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTTGTTCCTTTTGCAGACGTaGAGAAATGCCTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SGLLFDLCCSVSAVRVLLFLLQT*RNAYSA
Trigger: GGCAGAGTAGGCATTTCTGCACGTCTGCAAAAGGAA...CAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR GCA 90 bp AAAGAGGAGTTGTTCGGTGGGTATAGAACTTCAGAATTACAAGATGAGAAAGTTCGTGGGACAGGGCTGTaGGGTAGGCTGTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: KEELFGGYRTSELQDEKVRGTGL*GRLCRP
Trigger: TGGCCTACACAGCCTACCGCACAGCCCTGTCCCACG...AACTTTCTCATCTTGTAATTCTGAAGTTCTATACCCACCGAACAACTCCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp TCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTTGCTGTTTGATCTCTGCTaGTCTGTGTCAGCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: SGLLFDLCCSVSAVRVLLLFDLC*SVSAVR
Trigger: TCTTACCGCTGACACAGAGCAGCAGAGATCAAACAG...CAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGTTACTGTTTGATCTCTaGTGCTCTGTGTCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWLLFDL*CSVSAV
Trigger: TACCGCTGACACAGAGCAGCAGAGATCAAACAGTAA...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CCA 90 bp CAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGATCTGAGGTCCTGGTGTaGGCCAGTCTCTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVYNKTSSSPSELYPFFRSEVLV*ASLSGR
Trigger: CCTCCCTGAGAGACTGGCCCACACCAGGACCTCAGA...TCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CCA 90 bp TGTTTCACAACATGCATGGAGTTAACACTGCTGTACCATATGCTTAAAAATGGTAATGGTGCCAAGAGCTaGGGCAGGCAGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: CFTTCMELTLLYHMLKNGNGAKS*GRQGEG
Trigger: CCCTTCCCCCTGCCTGCCCCAGCTCTTGGCACCATT...ACCATTTTTAAGCATATGGTACAGCAGTGTTAACTCCATGCATGTTGTGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp TGTCTCTTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTGTCCTTCAAAAGGTaGAAAATCGACCCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: CLLSDIGDSCEDANDGGNLSFKR*KIDPQA
Trigger: GGCTTGAGGGTCGATTTTTCACCTTTTGAAGGACAA...GTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAAGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp TGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAGGAACCAGCTCCTCGTCCTTaGTGGAGATCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CTIRPVVLLQNSTHFSEEPAPRP*WRSAGQ
Trigger: CTGACCTGCAGATCTCCATCAAGGACGAGGAGCTGG...TTCCTCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp GAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTTACAAAGTCTTCTTTCTTaGGGATGCCAGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELQDEKVPGVCFTTCMELQSLLS*GCQGGW
Trigger: CCAGCCACCCTGGCATCCTCAAGAAAGAAGACTTTG...TAACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGGGTCACATGATGGCATaGATCAGATGTGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: NGVENEDFLDYCAGPCSEGHMMA*IRCVFQ
Trigger: CTGGAAGACACATCTGATTCATGCCATCATGTGACC...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp GAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTTACCAGCCCAGGTCACATaGTGGCATGAATCAGATGTG +
Preference number: 4 (lower is better)
Translates to: ELQDEKVPGVCFTTCMELPAQVT*WHESDV
Trigger: CACATCTGATTCATGCCATCATGTGACCTGGGCTGG...TAACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp TCGGTGGGTATAGAACTTCAGAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTGGAGGCGTCTTGAATaGCCATTCCAGCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SVGIELQNYKMRKFRGSVWRRLE*PFQPFL
Trigger: AAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCA...AACAGACCCCCGGAACTTTCTCATCTTGTAATTCTGAAGTTCTATACCCACCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp GTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTCCCATGGAGGCGTCTTaGATGACCATTCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: VQQVYNKTSSSPSELYPFPMEAS*MTIPAL
Trigger: AAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGG...AAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp CAGAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTGCCACTGCTCTGGGTTaGAGCATATCAGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: QNYKMRKFRGSVSQHAWSATALG*SISEFC
Trigger: GCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGC...ACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR TCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGTCTGTTGATGTCTCTTaGGTGACATTGGAGATAGCT +
Preference number: 4 (lower is better)
Translates to: KEKRASGLLFDLCCSVSASVDVS*VTLEIA
Trigger: AGCTATCTCCAATGTCACTCAAGAGACATCAACAGA...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp TCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTTGTTACTGTTTGATCTCTaGTGCTCTGTGTCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: SGLLFDLCCSVSAVRVLLLLFDL*CSVSAV
Trigger: TACCGCTGACACAGAGCAGCAGAGATCAAACAGTAA...CAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CCA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGAGAATGAAGACTTTCTaGATTACTGTGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWRMKTF*ITVLVP
Trigger: AGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCT...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp GAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTTAATCGGGGTTACTGTTTaGTCTCTGCTGCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: ELQDEKVPGVCFTTCMELIGVTV*SLLLCV
Trigger: GACACAGAGCAGCAGAGATCAAACAGTAACCCCGAT...TAACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp TGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAGGAACCCATGGAGGCGTCTTaGATGACCATTCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: CTIRPVVLLQNSTHFSEEPMEAS*MTIPAL
Trigger: AAGGGCTGGAATGGTCATTCAAGACGCCTCCATGGG...TTCCTCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp CAGAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTAGATTCAAGGTGAGGTaGCAGAGCAATGAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: QNYKMRKFRGSVSQHAWSRFKVR*QSNEVC
Trigger: GCAGACTTCATTGCTCTGTCACCTCACCTTGAATCT...ACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp TGTCTCTTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTGTTAGATTCAAGGTaGGGTGACAGAGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: CLLSDIGDSCEDANDGGNLLDSR*GDRAMK
Trigger: CTTCATTGCTCTGTCACCTCACCTTGAATCTAACAA...GTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAAGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGTTCAGAATTACAAGATaGGAAAGTTCCGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: NGVENEDFLDYCAGPCSEFRITR*ESSGGL
Trigger: CAGACCCCCGGAACTTTCTCATCTTGTAATTCTGAA...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGAGCAACATCTTCCAATaGATCTTGTCCTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: KEKRASGLLFDLCCSVSASNIFQ*ILSFKR
Trigger: CCTTTTGAAGGACAAGATGCATTGGAAGATGTTGCT...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp TGTTTCACAACATGCATGGAGTTAACACTGCTGTACCATATGCTTAAAAATGGTTCCTCCAGGGAGGTCTaGAGGACTGGGTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: CFTTCMELTLLYHMLKNGSSREV*RTGFNG
Trigger: GCCATTGAACCCAGTCCTGCAGACCTCCCTGGAGGA...ACCATTTTTAAGCATATGGTACAGCAGTGTTAACTCCATGCATGTTGTGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp GAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTTATCCTTGATGGAGATCTaGAGGTCAGGGCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: ELQDEKVPGVCFTTCMELSLMEI*RSGLIS
Trigger: TGAGATCAGCCCTGACCTGCAGATCTCCATCAAGGA...TAACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp TCGGTGGGTATAGAACTTCAGAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTCTGTTTGATCTCTGCTaGTCTGTGTCAGCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: SVGIELQNYKMRKFRGSVLFDLC*SVSAVR
Trigger: TCTTACCGCTGACACAGAGCAGCAGAGATCAAACAG...AACAGACCCCCGGAACTTTCTCATCTTGTAATTCTGAAGTTCTATACCCACCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CCA 90 bp TGTCTCTTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACAGAATGAAGACTTTCTaGATTACTGTGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: CLLSDIGDSCEDANDGGNRMKTF*ITVLVP
Trigger: AGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCT...GTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAAGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
3UTR CAA 72 bp GATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTaGCTGGTCTCTGTAAATGGAGTAGAGAATGAAGAC +
Preference number: 4 (lower is better)
Translates to: DLCCSVSAVRVL*LVSVNGVENED
Trigger: GTCTTCATTCTCTACTCCATTTACAGAGACCAGCAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp TACAAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCATCTGTTGATGTCTCTTaGGTGACATTGGAGATAGCT +
Preference number: 4 (lower is better)
Translates to: YKEKRASGLLFDLCCSVSSVDVS*VTLEIA
Trigger: AGCTATCTCCAATGTCACTCAAGAGACATCAACAGA...TGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGCCTGCAGAAATACTTTaGTTTGTTAGATTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWPAEIL*FVRFKV
Trigger: CACCTTGAATCTAACAAATCAAAGTATTTCTGCAGG...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp TCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTTGAGCAACATCTTCCAATaGATCTTGTCCTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SGLLFDLCCSVSAVRVLLSNIFQ*ILSFKR
Trigger: CCTTTTGAAGGACAAGATGCATTGGAAGATGTTGCT...CAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCTCCTTGATGGAGATCTaGAGGTCAGGGCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTSLMEI*RSGLIS
Trigger: TGAGATCAGCCCTGACCTGCAGATCTCCATCAAGGA...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CCA 90 bp TACAAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAAGAATGAAGACTTTCTaGATTACTGTGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: YKEKRASGLLFDLCCSVSRMKTF*ITVLVP
Trigger: AGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCT...TGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CCA 90 bp GTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTAAAGTTTTTAGATCCTaGGCCAGGCACGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VQQVYNKTSSSPSELYPFKVFRS*ARHGGS
Trigger: TGAGCCACCGTGCCTGGCCCAGGATCTAAAAACTTT...AAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp TCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTTGAAATGGAGTAGAGAATaGAGACTTTCTGGATTACTG +
Preference number: 4 (lower is better)
Translates to: SGLLFDLCCSVSAVRVLLKWSRE*RLSGLL
Trigger: CAGTAATCCAGAAAGTCTTCATTCTCTACTCCATTT...CAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp GTAAGAGTTTTGTTGCTGGTCTCTGTAAATGGAGTAGAGAATGAAGACTTTCTGTGGAGGCGTCTTGAATaGCCATTCCAGCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VRVLLLVSVNGVENEDFLWRRLE*PFQPFL
Trigger: AAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCCA...CAGAAAGTCTTCATTCTCTACTCCATTTACAGAGACCAGCAACAAAACTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp TGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAGGAAGCTCACGCTCTGGGTTaGAGCATATCAGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: CTIRPVVLLQNSTHFSEEAHALG*SISEFC
Trigger: GCAGAATTCTGATATGCTTCAACCCAGAGCGTGAGC...TTCCTCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444083.5
CDS-3UTR GCA 90 bp AAAGAGGAGTTGTTCGGTGGGTATAGAACTTCAGAATTACAAGATGAGAAAGTTCAGAAATGCCTACTCTaGCTCAGAAGGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KEELFGGYRTSELQDEKVQKCLL*LRRLEA
Trigger: AGCCTCCAGCCTTCTGAGGCAGAGTAGGCATTTCTG...AACTTTCTCATCTTGTAATTCTGAAGTTCTATACCCACCGAACAACTCCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR GCA 90 bp ATCTTAAGTAGTCAGACTCTCAAAAACAGAAAGCAGAATAATGGTGCCAAGAGCTCCCTCCCTTCCTTTTaGAGACGTGCAGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: ILSSQTLKNRKQNNGAKSSLPSF*RRAEMP
Trigger: AGGCATTTCTGCACGTCTGCAAAAGGAAGGGAGGGA...GCTCTTGGCACCATTATTCTGCTTTCTGTTTTTGAGAGTCTGACTACTTAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR GCA 90 bp AAGGAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGTTAGACCATTGGACCTaGAGAAATACTTTGATTTGT +
Preference number: 4 (lower is better)
Translates to: KEKRASGLLFDLCCSVSALDHWT*RNTLIC
Trigger: ACAAATCAAAGTATTTCTGCAGGTCCAATGGTCTAA...CGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp GTAAGAGTTTTGTTGCTGGTCTCTGTAAATGGAGTAGAGAATGAAGACTTTCTGCTGTTTGATCTCTGCTaGTCTGTGTCAGCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: VRVLLLVSVNGVENEDFLLFDLC*SVSAVR
Trigger: TCTTACCGCTGACACAGAGCAGCAGAGATCAAACAG...CAGAAAGTCTTCATTCTCTACTCCATTTACAGAGACCAGCAACAAAACTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR GCA 90 bp ATCTTAAGTAGTCAGACTCTCAAAAACAGAAAGCAGAATAATGGTGCCAAGAGCATAGGCAAACCATTCTaGCCATGGAGGCGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: ILSSQTLKNRKQNNGAKSIGKPF*PWRRLE
Trigger: TTCAAGACGCCTCCATGGGCAGAATGGTTTGCCTAT...GCTCTTGGCACCATTATTCTGCTTTCTGTTTTTGAGAGTCTGACTACTTAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp TGTCTCTTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTAGACCATTGGACCTaGAGAAATACTTTGATTTGT +
Preference number: 4 (lower is better)
Translates to: CLLSDIGDSCEDANDGGNLDHWT*RNTLIC
Trigger: ACAAATCAAAGTATTTCTGCAGGTCCAATGGTCTAA...GTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAAGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CCA 90 bp TGTTTCACAACATGCATGGAGTTAACACTGCTGTACCATATGCTTAAAAATGGTCGGTGGCTCACGCTCTaGGTTGAAGCATATCAGAAT +
Preference number: 4 (lower is better)
Translates to: CFTTCMELTLLYHMLKNGRWLTL*VEAYQN
Trigger: ATTCTGATATGCTTCAACCCAGAGCGTGAGCCACCG...ACCATTTTTAAGCATATGGTACAGCAGTGTTAACTCCATGCATGTTGTGAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444083.5
CDS-3UTR TCA 90 bp GTAAGAGTTTTGTTGCTGGTCTCTGTAAATGGAGTAGAGAATGAAGACTTTCTGTTGTCCTTCAAAAGGTaGAAAATCGACCCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: VRVLLLVSVNGVENEDFLLSFKR*KIDPQA
Trigger: GGCTTGAGGGTCGATTTTTCACCTTTTGAAGGACAA...CAGAAAGTCTTCATTCTCTACTCCATTTACAGAGACCAGCAACAAAACTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp TCGGTGGGTATAGAACTTCAGAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTCAGTTAAATGTCTGTTaGTGTCTCTTGAGTGACATT +
Preference number: 4 (lower is better)
Translates to: SVGIELQNYKMRKFRGSVQLNVC*CLLSDI
Trigger: AATGTCACTCAAGAGACATCAACAGACATTTAACTG...AACAGACCCCCGGAACTTTCTCATCTTGTAATTCTGAAGTTCTATACCCACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp ATCTTAAGTAGTCAGACTCTCAAAAACAGAAAGCAGAATAATGGTGCCAAGAGCGAGGTGACAGAGCAATaGAGTCTGCAGCAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: ILSSQTLKNRKQNNGAKSEVTEQ*SLQQLN
Trigger: ATTTAACTGCTGCAGACTTCATTGCTCTGTCACCTC...GCTCTTGGCACCATTATTCTGCTTTCTGTTTTTGAGAGTCTGACTACTTAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp GTAAGAGTTTTGTTGCTGGTCTCTGTAAATGGAGTAGAGAATGAAGACTTTCTGTTCAGAATTACAAGATaGGAAAGTTCCGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VRVLLLVSVNGVENEDFLFRITR*ESSGGL
Trigger: CAGACCCCCGGAACTTTCTCATCTTGTAATTCTGAA...CAGAAAGTCTTCATTCTCTACTCCATTTACAGAGACCAGCAACAAAACTCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp GAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTTAAGCAACATCTTCCAATaGATCTTGTCCTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: ELQDEKVPGVCFTTCMELSNIFQ*ILSFKR
Trigger: CCTTTTGAAGGACAAGATGCATTGGAAGATGTTGCT...TAACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR GCA 90 bp GTAAGAGTTTTGTTGCTGGTCTCTGTAAATGGAGTAGAGAATGAAGACTTTCTGTTACTGTTTGATCTCTaGTGCTCTGTGTCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: VRVLLLVSVNGVENEDFLLLFDL*CSVSAV
Trigger: TACCGCTGACACAGAGCAGCAGAGATCAAACAGTAA...CAGAAAGTCTTCATTCTCTACTCCATTTACAGAGACCAGCAACAAAACTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR TCA 90 bp AAAGAGGAGTTGTTCGGTGGGTATAGAACTTCAGAATTACAAGATGAGAAAGTTTTGTTAGATTCAAGGTaGGGTGACAGAGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: KEELFGGYRTSELQDEKVLLDSR*GDRAMK
Trigger: CTTCATTGCTCTGTCACCTCACCTTGAATCTAACAA...AACTTTCTCATCTTGTAATTCTGAAGTTCTATACCCACCGAACAACTCCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp CAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAAAATGGAGTAGAGAATaGAGACTTTCTGGATTACTG +
Preference number: 4 (lower is better)
Translates to: QVYNKTSSSPSELYPFFRKWSRE*RLSGLL
Trigger: CAGTAATCCAGAAAGTCTTCATTCTCTACTCCATTT...TCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp ATCTTAAGTAGTCAGACTCTCAAAAACAGAAAGCAGAATAATGGTGCCAAGAGCAAATGGAGTAGAGAATaGAGACTTTCTGGATTACTG +
Preference number: 4 (lower is better)
Translates to: ILSSQTLKNRKQNNGAKSKWSRE*RLSGLL
Trigger: CAGTAATCCAGAAAGTCTTCATTCTCTACTCCATTT...GCTCTTGGCACCATTATTCTGCTTTCTGTTTTTGAGAGTCTGACTACTTAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp TGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAGGAACAGTTAAATGTCTGTTaGTGTCTCTTGAGTGACATT +
Preference number: 4 (lower is better)
Translates to: CTIRPVVLLQNSTHFSEEQLNVC*CLLSDI
Trigger: AATGTCACTCAAGAGACATCAACAGACATTTAACTG...TTCCTCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR TCA 90 bp TGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAGGAACCTGCAGAAATACTTTaGTTTGTTAGATTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: CTIRPVVLLQNSTHFSEEPAEIL*FVRFKV
Trigger: CACCTTGAATCTAACAAATCAAAGTATTTCTGCAGG...TTCCTCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS CCA 90 bp GATGCCAGGGTGGCTGGAGAGGCTGGCGCTGAGCCGGCGGATGTCTaGGATGCTCTTGGGGATGACGTTGTTGCAGACGGTGCGGAAGTC +
Preference number: 5 (lower is better)
Translates to: DARVAGEAGAEPADV*DALGDDVVADGAEV
Trigger: GACTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAGCATCCCAGACATCCGCCGGCTCAGCGCCAGCCTCTCCAGCCACCCTGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS TCA 90 bp GAGGTCCTGGTGTGGGCCAGTCTCTCAGGGAGGTACTCCCGGCTGTaGGGAGCGCATCAAGTCGTGCCTCAGGGCCTGGAAGAGGCTAAC +
Preference number: 5 (lower is better)
Translates to: EVLVWASLSGRYSRL*GAHQVVPQGLEEAN
Trigger: GTTAGCCTCTTCCAGGCCCTGAGGCACGACTTGATGCGCTCCTCACAGCCGGGAGTACCTCCCTGAGAGACTGGCCCACACCAGGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS GCA 90 bp GTCTCTCAGGGAGGTACTCCCGGCTGTGAGGAGCGCATCAAGTCGTaGCTCAGGGCCTGGAAGAGGCTAACGAGGGACTGCGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: VSQGGTPGCEERIKS*LRAWKRLTRDCAQM
Trigger: CATCTGGGCGCAGTCCCTCGTTAGCCTCTTCCAGGCCCTGAGGCACGACTTGATGCGCTCCTCACAGCCGGGAGTACCTCCCTGAGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS GCA 90 bp GGGACTGCGCCCAGATGTCCTTCTGATGGCCGTGGGACAGGGCTGTaGGGTAGGCTGTGTAGGCCAGGGTCAGCACTGTCCTTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: GTAPRCPSDGRGTGL*GRLCRPGSALSFQS
Trigger: ACTTTGAAAGGACAGTGCTGACCCTGGCCTACACAGCCTACCGCACAGCCCTGTCCCACGGCCATCAGAAGGACATCTGGGCGCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS TCA 90 bp TGGGATGCTCTTGGGGATGACGTTGTTGCAGACGGTGCGGAAGTCTaGGGCCTTCCGCAAGGAGGCCAGCTCCTCGTCCTTGATGGAGAT +
Preference number: 5 (lower is better)
Translates to: WDALGDDVVADGAEV*GLPQGGQLLVLDGD
Trigger: ATCTCCATCAAGGACGAGGAGCTGGCCTCCTTGCGGAAGGCCTCAGACTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAGCATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CAA 90 bp GTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCGTGATGAGGACCTCTTaGGCCGGTGGGCGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: VCGHCSGLKHIRILPAIGVMRTS*AGGRQG
Trigger: TCCCTGCCGCCCACCGGCCAAAGAGGTCCTCATCAC...GCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS CCA 90 bp ATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGGTCCTaGTGTGGGCCAGTCTCTCAGGGAGGTACTCCCGGCTGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: MKTFWITVLVPALRS*CGPVSQGGTPGCEE
Trigger: CTCCTCACAGCCGGGAGTACCTCCCTGAGAGACTGGCCCACACCAGGACCTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS GCA 90 bp GATGATGGAGTGCTTCCCTCCCTTCCTTTTGCAGACGTGCAGAAATaGCTACTCTGCCTCAGAAGGCTGGAGGCTGAAGGCTGCGTCCTG +
Preference number: 5 (lower is better)
Translates to: DDGVLPSLPFADVQK*LLCLRRLEAEGCVL
Trigger: CAGGACGCAGCCTTCAGCCTCCAGCCTTCTGAGGCAGAGTAGGCATTTCTGCACGTCTGCAAAAGGAAGGGAGGGAAGCACTCCATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000435869.1
CDS-3UTR CAA 90 bp TTGAGTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATGTGATGAGGACCTCTTaGGCCGGTGGGCGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LSVWPLLWVEAYQNSACHVMRTS*AGGRQG
Trigger: TCCCTGCCGCCCACCGGCCAAAGAGGTCCTCATCAC...ATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACACTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS TCA 90 bp ACCCCAGTAGCTGCAGGTATGCCCGTGCCGTTCTTCCCAGTGAGATaGTGGAGTGCTTCCCTCCCTTCCTTTTGCAGACGTGCAGAAATG +
Preference number: 5 (lower is better)
Translates to: TPVAAGMPVPFFPVR*WSASLPSFCRRAEM
Trigger: CATTTCTGCACGTCTGCAAAAGGAAGGGAGGGAAGCACTCCATCATCTCACTGGGAAGAACGGCACGGGCATACCTGCAGCTACTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000435869.1
CDS TCA 90 bp TTTCGGATCATAGGACACAGAGCTTTCGCTGGGAGGGCCACCTGCTaGTCTAGACCTTGGGAAGGGAATGTGCCTGGTGGCAGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: FRIIGHRAFAGRATC*SRPWEGNVPGGREK
Trigger: TTTCTCCCTGCCACCAGGCACATTCCCTTCCCAAGGTCTAGATCAGCAGGTGGCCCTCCCAGCGAAAGCTCTGTGTCCTATGATCCGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435869.1
CDS GCA 90 bp CCCAGTGAGATGATGGAGTGCTTCCCTCCCTTCCTTTTGCAGACGTaGAGAAATGCCTACTCTGCCTCAGAAGGCTGGAGGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: PSEMMECFPPFLLQT*RNAYSASEGWRLKA
Trigger: AGCCTTCAGCCTCCAGCCTTCTGAGGCAGAGTAGGCATTTCTGCACGTCTGCAAAAGGAAGGGAGGGAAGCACTCCATCATCTCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000435869.1
CDS GCA 90 bp AGCTGCAGGTATGCCCGTGCCGTTCTTCCCAGTGAGATGATGGAGTaGTTCCCTCCCTTCCTTTTGCAGACGTGCAGAAATGCCTACTCT +
Preference number: 5 (lower is better)
Translates to: SCRYARAVLPSEMME*FPPFLLQTCRNAYS
Trigger: AGAGTAGGCATTTCTGCACGTCTGCAAAAGGAAGGGAGGGAAGCACTCCATCATCTCACTGGGAAGAACGGCACGGGCATACCTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000435869.1
CDS-3UTR CAA 90 bp GTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAACTCTTGGGGATGACGTaGTTGCAGACGGTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: VWPLLWVEAYQNSACHRQLLGMT*LQTVRK
Trigger: CTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAG...TTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS GCA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTaGTCTGAGGTCCTGGTGTGGGCCAGTCTCTCAGGGAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: NGVENEDFLDYCAGP*SEVLVWASLSGRYS
Trigger: GGAGTACCTCCCTGAGAGACTGGCCCACACCAGGACCTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CAA 90 bp TTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTAGAAGTGATGAGGACCTCTTaGGCCGGTGGGCGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LSDIGDSCEDANDGGNLEVMRTS*AGGRQG
Trigger: TCCCTGCCGCCCACCGGCCAAAGAGGTCCTCATCAC...TTCTAAGTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CAA 90 bp TTGAGTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATGCCAGCTCCTCGTCCTaGATGGAGATCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LSVWPLLWVEAYQNSACHASSSS*MEICRS
Trigger: TGACCTGCAGATCTCCATCAAGGACGAGGAGCTGGC...ATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR CAA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGCTCTTGGGGATGACGTaGTTGCAGACGGTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWLLGMT*LQTVRK
Trigger: CTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAG...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CAA 90 bp GAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAGCCCATGGAGGCGTCTaGAATGACCATTCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: EKRASGLLFDLCCSVSAVAHGGV*NDHSSP
Trigger: AGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGC...TACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS GCA 90 bp TCGCTGGGAGGGCCACCTGCTGATCTAGACCTTGGGAAGGGAATGTaGCTGGTGGCAGGGAGAAAATGCAACATTACTTCTGGAGAATTT +
Preference number: 5 (lower is better)
Translates to: SLGGPPADLDLGKGM*LVAGRKCNITSGEF
Trigger: AAATTCTCCAGAAGTAATGTTGCATTTTCTCCCTGCCACCAGGCACATTCCCTTCCCAAGGTCTAGATCAGCAGGTGGCCCTCCCAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435869.1
CDS-3UTR CAA 90 bp GAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTATTGGGGATGACGTTGTaGCAGACGGTGCGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: EKRASGLLFDLCCSVSAVLGMTL*QTVRKS
Trigger: AGACTTCCGCACCGTCTGCAACAACGTCATCCCCAA...TACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CAA 90 bp GTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAATGTCTGGGATGCTCTaGGGGATGACGTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: VWPLLWVEAYQNSACHRQMSGML*GMTLLQ
Trigger: CTGCAACAACGTCATCCCCAAGAGCATCCCAGACAT...TTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR CAA 90 bp GTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCCATCGGGGTTACTGTTaGATCTCTGCTGCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: VCGHCSGLKHIRILPAIGHRGYC*ISAALC
Trigger: ACACAGAGCAGCAGAGATCAAACAGTAACCCCGATG...GCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR CAA 90 bp CCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTGCCCATGGAGGCGTCTaGAATGACCATTCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: PLLWVEAYQNSACHRQTIAHGGV*NDHSSP
Trigger: AGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGC...AATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR CAA 90 bp TCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAAGAGTTTTGTTGTTGGGGATGACGTTGTaGCAGACGGTGCGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SGLLFDLCCSVSAVRVLLLGMTL*QTVRKS
Trigger: AGACTTCCGCACCGTCTGCAACAACGTCATCCCCAA...CAACAAAACTCTTACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CAA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGCTCTTGGGGATGACGTaGTTGCAGACGGTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: NGVENEDFLDYCAGPCSELLGMT*LQTVRK
Trigger: CTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAG...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS GCA 90 bp CCAGATCTTTTGGGAAGTATAGCTGCCTCCCTGGCAAAGTCTAGATaGCAGTCTCATGCCCAGATGTCAGTGGTCTCTCTGGCTAAAGTA +
Preference number: 5 (lower is better)
Translates to: PDLLGSIAASLAKSR*QSHAQMSVVSLAKV
Trigger: TACTTTAGCCAGAGAGACCACTGACATCTGGGCATGAGACTGGCATCTAGACTTTGCCAGGGAGGCAGCTATACTTCCCAAAAGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435869.1
CDS-3UTR CAA 90 bp TGTCTCTTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACATGTCTGGGATGCTCTaGGGGATGACGTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: CLLSDIGDSCEDANDGGNMSGML*GMTLLQ
Trigger: CTGCAACAACGTCATCCCCAAGAGCATCCCAGACAT...GTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAAGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CAA 90 bp GGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCAAACCATTCTGCCCATGGTCAAAGTCTTCTTTCTaGAGGATGCCAGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GLKHIRILPAIGKPFCPWSKSSF*RMPGWL
Trigger: CAGCCACCCTGGCATCCTCAAGAAAGAAGACTTTGA...CCATGGGCAGAATGGTTTGCCTATGGCAGGCAGAATTCTGATATGCTTCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CAA 90 bp GTGTGTGGCCACTGCTCTGGGTTGAAGCATATCAGAATTCTGCCTGCCATAGGCGCGGTAAGAGTTTTGTaGCTGGTCTCTGTAAATGGA +
Preference number: 5 (lower is better)
Translates to: VCGHCSGLKHIRILPAIGAVRVL*LVSVNG
Trigger: TCCATTTACAGAGACCAGCAACAAAACTCTTACCGC...GCCTATGGCAGGCAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCCACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS-3UTR CAA 90 bp GGAGGCGTCTTGAATGACCATTCCAGCCCTTTCTTCCAGCCCAGGTCACATGATGCGGTAAGAGTTTTGTaGCTGGTCTCTGTAAATGGA +
Preference number: 5 (lower is better)
Translates to: GGVLNDHSSPFFQPRSHDAVRVL*LVSVNG
Trigger: TCCATTTACAGAGACCAGCAACAAAACTCTTACCGC...ATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTCATTCAAGACGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CAA 90 bp GAGAAAAGAGCATCGGGGTTACTGTTTGATCTCTGCTGCTCTGTGTCAGCGGTAGGCCACTGCTCTGGGTaGAAGCATATCAGAATTCTG +
Preference number: 5 (lower is better)
Translates to: EKRASGLLFDLCCSVSAVGHCSG*KHIRIL
Trigger: CAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCC...TACCGCTGACACAGAGCAGCAGAGATCAAACAGTAACCCCGATGCTCTTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000415751.1
CDS GCA 90 bp GTGCCTGGTGGCAGGGAGAAAATGCAACATTACTTCTGGAGAATTTaGCTCAGAGTGTACAAAGTTAAGCCTTTCAGACCTCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VPGGREKMQHYFWRI*LRVYKVKPFRPPCW
Trigger: CCAGCAGGGAGGTCTGAAAGGCTTAACTTTGTACACTCTGAGGCAAATTCTCCAGAAGTAATGTTGCATTTTCTCCCTGCCACCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435869.1
CDS-3UTR CAA 90 bp TTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTAGAATTGGGGATGACGTTGTaGCAGACGGTGCGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: LSDIGDSCEDANDGGNLELGMTL*QTVRKS
Trigger: AGACTTCCGCACCGTCTGCAACAACGTCATCCCCAA...TTCTAAGTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CAA 90 bp GACCATTCCAGCCCTTTCTTCCAGCCCAGGTCACATGATGGCATGAATCAGATGGCGGTAAGAGTTTTGTaGCTGGTCTCTGTAAATGGA +
Preference number: 5 (lower is better)
Translates to: DHSSPFFQPRSHDGMNQMAVRVL*LVSVNG
Trigger: TCCATTTACAGAGACCAGCAACAAAACTCTTACCGC...CATCTGATTCATGCCATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CAA 90 bp TTGAGTGACATTGGAGATAGCTGTGAGGATGCCAACGATGGAGGAAACTTAGAAATGTCTGGGATGCTCTaGGGGATGACGTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LSDIGDSCEDANDGGNLEMSGML*GMTLLQ
Trigger: CTGCAACAACGTCATCCCCAAGAGCATCCCAGACAT...TTCTAAGTTTCCTCCATCGTTGGCATCCTCACAGCTATCTCCAATGTCACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CAA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGTCAAAGTCTTCTTTCTaGAGGATGCCAGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: NGVENEDFLDYCAGPCSESKSSF*RMPGWL
Trigger: CAGCCACCCTGGCATCCTCAAGAAAGAAGACTTTGA...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS-3UTR CAA 90 bp AATGGAGTAGAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTGCTCTGAGGGCTCACGCTCTGGGTaGAAGCATATCAGAATTCTG +
Preference number: 5 (lower is better)
Translates to: NGVENEDFLDYCAGPCSEGSRSG*KHIRIL
Trigger: CAGAATTCTGATATGCTTCAACCCAGAGCGTGAGCC...CTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTCTACTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444083.5
CDS-3UTR CAA 90 bp CAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCCATTTTTCAGAGCCCATGGAGGCGTCTaGAATGACCATTCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: QVYNKTSSSPSELYPFFRAHGGV*NDHSSP
Trigger: AGGGCTGGAATGGTCATTCAAGACGCCTCCATGGGC...TCTGAAAAATGGGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS GCA 90 bp GATCTAGACCTTGGGAAGGGAATGTGCCTGGTGGCAGGGAGAAAATaGAACATTACTTCTGGAGAATTTGCCTCAGAGTGTACAAAGTTA +
Preference number: 5 (lower is better)
Translates to: DLDLGKGMCLVAGRK*NITSGEFASECTKL
Trigger: TAACTTTGTACACTCTGAGGCAAATTCTCCAGAAGTAATGTTGCATTTTCTCCCTGCCACCAGGCACATTCCCTTCCCAAGGTCTAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435869.1
CDS CCA 90 bp GAAGGGAATGTGCCTGGTGGCAGGGAGAAAATGCAACATTACTTCTaGAGAATTTGCCTCAGAGTGTACAAAGTTAAGCCTTTCAGACCT +
Preference number: 5 (lower is better)
Translates to: EGNVPGGREKMQHYF*RICLRVYKVKPFRP
Trigger: AGGTCTGAAAGGCTTAACTTTGTACACTCTGAGGCAAATTCTCCAGAAGTAATGTTGCATTTTCTCCCTGCCACCAGGCACATTCCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435869.1
CDS-3UTR CAA 90 bp GAATTACAAGATGAGAAAGTTCCGGGGGTCTGTTTCACAACATGCATGGAGTTACATCGGGGTTACTGTTaGATCTCTGCTGCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: ELQDEKVPGVCFTTCMELHRGYC*ISAALC
Trigger: ACACAGAGCAGCAGAGATCAAACAGTAACCCCGATG...TAACTCCATGCATGTTGTGAAACAGACCCCCGGAACTTTCTCATCTTGTAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CAA 90 bp AATAGGTACAGCAAGTGTACAATAAGACCAGTAGTTCTCCTTCAGAACTCTACCTCAAAGTCTTCTTTCTaGAGGATGCCAGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: NRYSKCTIRPVVLLQNSTSKSSF*RMPGWL
Trigger: CAGCCACCCTGGCATCCTCAAGAAAGAAGACTTTGA...GGTAGAGTTCTGAAGGAGAACTACTGGTCTTATTGTACACTTGCTGTACCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CAA 90 bp TGTTTCACAACATGCATGGAGTTAACACTGCTGTACCATATGCTTAAAAATGGTTTCCCTCCCTTCCTTTaGCAGACGTGCAGAAATGCC +
Preference number: 5 (lower is better)
Translates to: CFTTCMELTLLYHMLKNGFPPFL*QTCRNA
Trigger: GGCATTTCTGCACGTCTGCAAAAGGAAGGGAGGGAA...ACCATTTTTAAGCATATGGTACAGCAGTGTTAACTCCATGCATGTTGTGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS-3UTR CAA 90 bp ATCTTAAGTAGTCAGACTCTCAAAAACAGAAAGCAGAATAATGGTGCCAAGAGCCATCGGGGTTACTGTTaGATCTCTGCTGCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: ILSSQTLKNRKQNNGAKSHRGYC*ISAALC
Trigger: ACACAGAGCAGCAGAGATCAAACAGTAACCCCGATG...GCTCTTGGCACCATTATTCTGCTTTCTGTTTTTGAGAGTCTGACTACTTAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000444083.5
CDS-3UTR CAA 90 bp TGTTTCACAACATGCATGGAGTTAACACTGCTGTACCATATGCTTAAAAATGGTGGCCACTGCTCTGGGTaGAAGCATATCAGAATTCTG +
Preference number: 5 (lower is better)
Translates to: CFTTCMELTLLYHMLKNGGHCSG*KHIRIL
Trigger: CAGAATTCTGATATGCTTCAACCCAGAGCAGTGGCC...ACCATTTTTAAGCATATGGTACAGCAGTGTTAACTCCATGCATGTTGTGAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338588.8
CDS CAA 90 bp GCGCTGAGCCGGCGGATGTCTGGGATGCTCTTGGGGATGACGTTGTaGCAGACGGTGCGGAAGTCTGAGGCCTTCCGCAAGGAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: ALSRRMSGMLLGMTL*QTVRKSEAFRKEAS
Trigger: GCTGGCCTCCTTGCGGAAGGCCTCAGACTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAGCATCCCAGACATCCGCCGGCTCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS CAA 90 bp CTGGCGCTGAGCCGGCGGATGTCTGGGATGCTCTTGGGGATGACGTaGTTGCAGACGGTGCGGAAGTCTGAGGCCTTCCGCAAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: LALSRRMSGMLLGMT*LQTVRKSEAFRKEA
Trigger: GGCCTCCTTGCGGAAGGCCTCAGACTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAGCATCCCAGACATCCGCCGGCTCAGCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS TCA 72 bp GTGTGGGCCAGTCTCTCAGGGAGGTACTCCCGGCTGTaGGGAGCGCATCAAGTCGTGCCTCAGGGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: VWASLSGRYSRL*GAHQVVPQGLE
Trigger: TTCCAGGCCCTGAGGCACGACTTGATGCGCTCCTCACAGCCGGGAGTACCTCCCTGAGAGACTGGCCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS GCA 72 bp CCCAGATGTCCTTCTGATGGCCGTGGGACAGGGCTGTaGGGTAGGCTGTGTAGGCCAGGGTCAGCACTGTCC +
Preference number: 6 (lower is better)
Translates to: PRCPSDGRGTGL*GRLCRPGSALS
Trigger: GGACAGTGCTGACCCTGGCCTACACAGCCTACCGCACAGCCCTGTCCCACGGCCATCAGAAGGACATCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS CCA 72 bp GGCTGTGAGGAGCGCATCAAGTCGTGCCTCAGGGCCTaGAAGAGGCTAACGAGGGACTGCGCCCAGATGTCC +
Preference number: 6 (lower is better)
Translates to: GCEERIKSCLRA*KRLTRDCAQMS
Trigger: GGACATCTGGGCGCAGTCCCTCGTTAGCCTCTTCCAGGCCCTGAGGCACGACTTGATGCGCTCCTCACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS CAA 72 bp GCAGGACTGGGTTCAATGGCAGTGATGAGGACCTCTTaGGCCGGTGGGCGGCAGGGAAGAGCACAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: AGLGSMAVMRTS*AGGRQGRAQPC
Trigger: GCAGGGCTGTGCTCTTCCCTGCCGCCCACCGGCCAAAGAGGTCCTCATCACTGCCATTGAACCCAGTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000435869.1
ENST00000444083.5
CDS CAA 90 bp TGGCTGGAGAGGCTGGCGCTGAGCCGGCGGATGTCTGGGATGCTCTaGGGGATGACGTTGTTGCAGACGGTGCGGAAGTCTGAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: WLERLALSRRMSGML*GMTLLQTVRKSEAF
Trigger: GAAGGCCTCAGACTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAGCATCCCAGACATCCGCCGGCTCAGCGCCAGCCTCTCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS CAA 72 bp AGCCGGCGGATGTCTGGGATGCTCTTGGGGATGACGTaGTTGCAGACGGTGCGGAAGTCTGAGGCCTTCCGC +
Preference number: 6 (lower is better)
Translates to: SRRMSGMLLGMT*LQTVRKSEAFR
Trigger: GCGGAAGGCCTCAGACTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAGCATCCCAGACATCCGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS CAA 72 bp AGGCTGGCGCTGAGCCGGCGGATGTCTGGGATGCTCTaGGGGATGACGTTGTTGCAGACGGTGCGGAAGTCT +
Preference number: 6 (lower is better)
Translates to: RLALSRRMSGML*GMTLLQTVRKS
Trigger: AGACTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAGCATCCCAGACATCCGCCGGCTCAGCGCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS TCA 72 bp CTTGGGGATGACGTTGTTGCAGACGGTGCGGAAGTCTaGGGCCTTCCGCAAGGAGGCCAGCTCCTCGTCCTT +
Preference number: 6 (lower is better)
Translates to: LGDDVVADGAEV*GLPQGGQLLVL
Trigger: AAGGACGAGGAGCTGGCCTCCTTGCGGAAGGCCTCAGACTTCCGCACCGTCTGCAACAACGTCATCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS GCA 72 bp CGCAAGGAGGCCAGCTCCTCGTCCTTGATGGAGATCTaGAGGTCAGGGCTGATCTCAAGTTCGGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RKEASSSSLMEI*RSGLISSSASR
Trigger: CCTGCTGGCCGAACTTGAGATCAGCCCTGACCTGCAGATCTCCATCAAGGACGAGGAGCTGGCCTCCTTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS CAA 72 bp CGGCGGATGTCTGGGATGCTCTTGGGGATGACGTTGTaGCAGACGGTGCGGAAGTCTGAGGCCTTCCGCAAG +
Preference number: 6 (lower is better)
Translates to: RRMSGMLLGMTL*QTVRKSEAFRK
Trigger: CTTGCGGAAGGCCTCAGACTTCCGCACCGTCTGCAACAACGTCATCCCCAAGAGCATCCCAGACATCCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS TCA 72 bp ATAGGACACAGAGCTTTCGCTGGGAGGGCCACCTGCTaGTCTAGACCTTGGGAAGGGAATGTGCCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: IGHRAFAGRATC*SRPWEGNVPGG
Trigger: GCCACCAGGCACATTCCCTTCCCAAGGTCTAGATCAGCAGGTGGCCCTCCCAGCGAAAGCTCTGTGTCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435869.1
CDS GCA 72 bp AAAATCGACCCTCAAGCCCAGTGGAACCCCAGTAGCTaGAGGTATGCCCGTGCCGTTCTTCCCAGTGAGATG +
Preference number: 6 (lower is better)
Translates to: KIDPQAQWNPSS*RYARAVLPSEM
Trigger: CATCTCACTGGGAAGAACGGCACGGGCATACCTGCAGCTACTGGGGTTCCACTGGGCTTGAGGGTCGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000435869.1
CDS CAA 90 bp GCCGTTCTTCCCAGTGAGATGATGGAGTGCTTCCCTCCCTTCCTTTaGCAGACGTGCAGAAATGCCTACTCTGCCTCAGAAGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: AVLPSEMMECFPPFL*QTCRNAYSASEGWR
Trigger: CCTCCAGCCTTCTGAGGCAGAGTAGGCATTTCTGCACGTCTGCAAAAGGAAGGGAGGGAAGCACTCCATCATCTCACTGGGAAGAACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000435869.1
CDS GCA 72 bp GAGAATGAAGACTTTCTGGATTACTGTGCTGGTCCCTaGTCTGAGGTCCTGGTGTGGGCCAGTCTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: ENEDFLDYCAGP*SEVLVWASLSG
Trigger: CCCTGAGAGACTGGCCCACACCAGGACCTCAGAGCAGGGACCAGCACAGTAATCCAGAAAGTCTTCATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338588.8
ENST00000415751.1
ENST00000444083.5
CDS GCA 72 bp ATGATGGAGTGCTTCCCTCCCTTCCTTTTGCAGACGTaGAGAAATGCCTACTCTGCCTCAGAAGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: MMECFPPFLLQT*RNAYSASEGWR
Trigger: CCTCCAGCCTTCTGAGGCAGAGTAGGCATTTCTGCACGTCTGCAAAAGGAAGGGAGGGAAGCACTCCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000435869.1
CDS GCA 72 bp TATGCCCGTGCCGTTCTTCCCAGTGAGATGATGGAGTaGTTCCCTCCCTTCCTTTTGCAGACGTGCAGAAAT +
Preference number: 6 (lower is better)
Translates to: YARAVLPSEMME*FPPFLLQTCRN
Trigger: ATTTCTGCACGTCTGCAAAAGGAAGGGAGGGAAGCACTCCATCATCTCACTGGGAAGAACGGCACGGGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000435869.1
CDS CAA 72 bp CCCAGTGAGATGATGGAGTGCTTCCCTCCCTTCCTTTaGCAGACGTGCAGAAATGCCTACTCTGCCTCAGAA +
Preference number: 6 (lower is better)
Translates to: PSEMMECFPPFL*QTCRNAYSASE
Trigger: TTCTGAGGCAGAGTAGGCATTTCTGCACGTCTGCAAAAGGAAGGGAGGGAAGCACTCCATCATCTCACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338588.8
ENST00000435869.1
CDS CAA 90 bp GACCATCATCGTAAACATAATCTCACGTACCCAAGCACAGCTTTATaGTTTCGGATCATAGGACACAGAGCTTTCGCTGGGAGGGCCACC +
Preference number: 6 (lower is better)
Translates to: DHHRKHNLTYPSTAL*FRIIGHRAFAGRAT
Trigger: GGTGGCCCTCCCAGCGAAAGCTCTGTGTCCTATGATCCGAAACAATAAAGCTGTGCTTGGGTACGTGAGATTATGTTTACGATGATGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435869.1
CDS CAA 72 bp CGTAAACATAATCTCACGTACCCAAGCACAGCTTTATaGTTTCGGATCATAGGACACAGAGCTTTCGCTGGG +
Preference number: 6 (lower is better)
Translates to: RKHNLTYPSTAL*FRIIGHRAFAG
Trigger: CCCAGCGAAAGCTCTGTGTCCTATGATCCGAAACAATAAAGCTGTGCTTGGGTACGTGAGATTATGTTTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435869.1