Pregenerated sensors for FAM177A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000151327Ensembl transcript IDs: ENST00000280987.9, ENST00000382406.7, ENST00000396472.5, ENST00000553852.1, ENST00000553901.1, ENST00000553955.2, ENST00000554794.1, ENST00000555211.5, ENST00000555260.1
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGATGCCCAGGCAGGCGCTCGCACCAGAAGAGACTGAGAAGTGGTTaGAGCCGCCCTCACCTGGCTTCCAGCTACTGCAAGGACAGCCTT | + |
|
Preference number: 1 (lower is better) Translates to: RCPGRRSHQKRLRSG*SRPHLASSYCKDSL Trigger: AAGGCTGTCCTTGCAGTAGCTGGAAGCCAGGTGAGGGCGGCTTCAACCACTTCTCAGTCTCTTCTGGTGCGAGCGCCTGCCTGGGCATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| 3UTR CCA 90 bp | TCTTTCGTTACTCATCTGGCTTCCAGCTACTGCAAGGACAGCCTTTaGGGGACACGCCTTTCTTCTTCCTCTGGTAGACCAGAAGCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: SFVTHLASSYCKDSL*GTRLSSSSGRPEAG Trigger: TCCAGCTTCTGGTCTACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCAGTAGCTGGAAGCCAGATGAGTAACGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553852.1 |
||
| 3UTR CCA 90 bp | CCTGTGACACAGCCTTCAAGAGATCCTGAGAACATGTACCAAAGGTaGTTTGGGTGCAGCTTGGTTTCATACATTTTAGGGAGGCATGAG | + |
|
Preference number: 1 (lower is better) Translates to: PVTQPSRDPENMYQR*FGCSLVSYILGRHE Trigger: CTCATGCCTCCCTAAAATGTATGAAACCAAGCTGCACCCAAACCACCTTTGGTACATGTTCTCAGGATCTCTTGAAGGCTGTGTCACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR TCA 90 bp | AGCCTCTTTCGTTACTCATCTCGAGCGGTTACTGTAAGGATCCAGTaGATTAAAGCTGGTAAACGTTTGGCATATGCCAAGCAAAGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: SLFRYSSRAVTVRIQ*IKAGKRLAYAKQRA Trigger: TGCCCTTTGCTTGGCATATGCCAAACGTTTACCAGCTTTAATTCACTGGATCCTTACAGTAACCGCTCGAGATGAGTAACGAAAGAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| 3UTR GCA 90 bp | CAGCCTTCAAGAGATCCTGAGAACATGTACCAAAGGTGGTTTGGGTaGAGCTTGGTTTCATACATTTTAGGGAGGCATGAGACATCAATC | + |
|
Preference number: 1 (lower is better) Translates to: QPSRDPENMYQRWFG*SLVSYILGRHETSI Trigger: GATTGATGTCTCATGCCTCCCTAAAATGTATGAAACCAAGCTGCACCCAAACCACCTTTGGTACATGTTCTCAGGATCTCTTGAAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR TCA 90 bp | TCCAGGCTACAGGTAAATTCAAATGTTTTCTGGTTGACACTTGGCTaGGTTTGTCTAAAGACCTTGTATTTTCAGCTGCCTGCTGAAGAT | + |
|
Preference number: 1 (lower is better) Translates to: SRLQVNSNVFWLTLG*VCLKTLYFQLPAED Trigger: ATCTTCAGCAGGCAGCTGAAAATACAAGGTCTTTAGACAAACTCAGCCAAGTGTCAACCAGAAAACATTTGAATTTACCTGTAGCCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR TCA 90 bp | ACATTTGAGAAATACATTGGTTTGATCCAGAAAGGTGGGACAATTTaGAGTGGGGCTTCCAGGCTACAGGTAAATTCAAATGTTTTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: TFEKYIGLIQKGGTI*SGASRLQVNSNVFW Trigger: CCAGAAAACATTTGAATTTACCTGTAGCCTGGAAGCCCCACTTCAAATTGTCCCACCTTTCTGGATCAAACCAATGTATTTCTCAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR TCA 90 bp | CTGAACACTCCTAATGAAAAGTTTAATTATCCTTCAACCTGTAGTTaGAGAACTCAGTTCATGTTCATTGACAGATTTCCATTACAGACC | + |
|
Preference number: 1 (lower is better) Translates to: LNTPNEKFNYPSTCS*RTQFMFIDRFPLQT Trigger: GGTCTGTAATGGAAATCTGTCAATGAACATGAACTGAGTTCTTCAACTACAGGTTGAAGGATAATTAAACTTTTCATTAGGAGTGTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| 3UTR TCA 90 bp | TTACCATCACTTACTATGAACCACCATTCCATGAATCCATGTAGCTaGACACTCCTAATGAAAAGTTTAATTATCCTTCAACCTGTAGTT | + |
|
Preference number: 1 (lower is better) Translates to: LPSLTMNHHSMNPCS*TLLMKSLIILQPVV Trigger: AACTACAGGTTGAAGGATAATTAAACTTTTCATTAGGAGTGTTCAGCTACATGGATTCATGGAATGGTGGTTCATAGTAAGTGATGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTGGACTATCACCCCAGGAACCCGAGGCCGCCCCAGAGTCTGCTGTGCTGCAAAGCTGGGGCGGCCTaGTCGGAGGACGGCCGCGCA | + |
|
Preference number: 2 (lower is better) Translates to: KLDYHPRNPRPPQSLLCCKAGAA*SEDGRA Trigger: TGCGCGGCCGTCCTCCGAGCAGGCCGCCCCAGCTTT...GCAGCACAGCAGACTCTGGGGCGGCCTCGGGTTCCTGGGGTGATAGTCCAGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAAGCTGGACTATCACCCCAGGAACCCGAGGCCGCCCCAGAGTCTGCTGTGGAAACAGGGGTGCAGTaGGGAGGAACTCCAAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PEAGLSPQEPEAAPESAVETGVQ*GGTPKL Trigger: CAGCTTTGGAGTTCCTCCTCACTGCACCCCTGTTTC...CACAGCAGACTCTGGGGCGGCCTCGGGTTCCTGGGGTGATAGTCCAGCTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTACTGCAAGGACAGCCTTTGGGGGACACGCCTTTCTTCTTCCTCTGGTAGACCCCCAGAGTCTGCTGTaGTGCCAGCCAAGGGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ATARTAFGGHAFLLPLVDPQSLL*CQPRGW Trigger: CCAACCCCTTGGCTGGCAGCACAGCAGACTCTGGGG...GTCTACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCAGTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTACTGCAAGGACAGCCTTTGGGGGACACGCCTTTCTTCTTCCTCTGGTAGAGAGGAACTCCAAAGCTaGGGCGGCCTGCTCGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SYCKDSLWGTRLSSSSGREELQS*GGLLGG Trigger: TCCTCCGAGCAGGCCGCCCCAGCTTTGGAGTTCCTC...TCTACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCAGTAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| 3UTR-3UTR GCA 90 bp | ACACGCCTTTCTTCTTCCTCTGGTAGACCAGAAGCTGGACTATCACCCCAGGAACCCCAGAGTCTGCTGTaGTGCCAGCCAAGGGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: TRLSSSSGRPEAGLSPQEPQSLL*CQPRGW Trigger: CCAACCCCTTGGCTGGCAGCACAGCAGACTCTGGGG...TTCCTGGGGTGATAGTCCAGCTTCTGGTCTACCAGAGGAAGAAGAAAGGCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTACTGCAAGGACAGCCTTTGGGGGACACGCCTTTCTTCTTCCTCTGGTAGAACAAGCTGGTCTCAGTaGGCAGAAACAGGGGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SYCKDSLWGTRLSSSSGRTSWSQ*AETGVQ Trigger: CTGCACCCCTGTTTCTGCTCACTGAGACCAGCTTGT...TCTACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCAGTAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| 3UTR-3UTR TCA 90 bp | ACACGCCTTTCTTCTTCCTCTGGTAGACCAGAAGCTGGACTATCACCCCAGGAAGAAACAGGGGTGCAGTaGGGAGGAACTCCAAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TRLSSSSGRPEAGLSPQEETGVQ*GGTPKL Trigger: CAGCTTTGGAGTTCCTCCTCACTGCACCCCTGTTTC...TTCCTGGGGTGATAGTCCAGCTTCTGGTCTACCAGAGGAAGAAGAAAGGCGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCAAATATGAGTGGCCATGGCCTGTGACACAGCCTTCAAGAGATCCTGAGAACCAAATGTTTTCTGGTTaGCACTTGGCTGAGTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: AKYEWPWPVTQPSRDPENQMFSG*HLAEFV Trigger: GACAAACTCAGCCAAGTGTCAACCAGAAAACATTTG...GTTCTCAGGATCTCTTGAAGGCTGTGTCACAGGCCATGGCCACTCATATTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR CAA 90 bp | TCAAGAGATCCTGAGAACATGTACCAAAGGTGGTTTGGGTGCAGCTaGGTTTCATACATTTTAGGGAGGCATGAGACATCAATCAAATAC | + |
|
Preference number: 2 (lower is better) Translates to: SRDPENMYQRWFGCS*VSYILGRHETSIKY Trigger: GTATTTGATTGATGTCTCATGCCTCCCTAAAATGTATGAAACCAAGCTGCACCCAAACCACCTTTGGTACATGTTCTCAGGATCTCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTTCTGAATTTCAGATCTaGCTTTTGCTAGATAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: RGVANQIQVNCPVFTVATSEFQI*LLLDRS Trigger: GGATCTATCTAGCAAAAGCCAGATCTGAAATTCAGA...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTTGACACTTGGCTGAGTTTGTCTAAAGACCTTGTATTTTCAGCTGCCTGCTCTGAATTTCAGATCTaGCTTTTGCTAGATAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: LVDTWLSLSKDLVFSAACSEFQI*LLLDRS Trigger: GGATCTATCTAGCAAAAGCCAGATCTGAAATTCAGA...GCAGGCAGCTGAAAATACAAGGTCTTTAGACAAACTCAGCCAAGTGTCAACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTAAAGACCTTGTATTTTCAGCTGCCTGCTGAAGATGAAGTCTTACTACAGGGTAATTGGTGGCTTTaGGAAGCTGCATCAGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CLKTLYFQLPAEDEVLLQGNWWL*EAASEV Trigger: AACTTCTGATGCAGCTTCCCAAAGCCACCAATTACC...CTGTAGTAAGACTTCATCTTCAGCAGGCAGCTGAAAATACAAGGTCTTTAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR TCA 72 bp | GCAGATGCCCAGGCAGGCGCTCGCACCAGAAGAGACTaGGAAGTGGTTGAAGCCGCCCTCACCTGGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ADAQAGARTRRD*EVVEAALTWLP Trigger: TGGAAGCCAGGTGAGGGCGGCTTCAACCACTTCTCAGTCTCTTCTGGTGCGAGCGCCTGCCTGGGCATCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| 3UTR CCA 72 bp | CCTCACCTGGCTTCCAGCTACTGCAAGGACAGCCTTTaGGGGACACGCCTTTCTTCTTCCTCTGGTAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: PHLASSYCKDSL*GTRLSSSSGRP Trigger: TGGTCTACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCAGTAGCTGGAAGCCAGGTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| 3UTR CCA 72 bp | ACTCATCTGGCTTCCAGCTACTGCAAGGACAGCCTTTaGGGGACACGCCTTTCTTCTTCCTCTGGTAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: THLASSYCKDSL*GTRLSSSSGRP Trigger: TGGTCTACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCAGTAGCTGGAAGCCAGATGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553852.1 |
||
| 3UTR TCA 72 bp | GTGGCCATGGCCTGTGACACAGCCTTCAAGAGATCCTaGGAACATGTACCAAAGGTGGTTTGGGTGCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VAMACDTAFKRS*EHVPKVVWVQL Trigger: AAGCTGCACCCAAACCACCTTTGGTACATGTTCTCAGGATCTCTTGAAGGCTGTGTCACAGGCCATGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR TCA 72 bp | ATTTATTCTGAGCCAAATATGAGTGGCCATGGCCTGTaGCACAGCCTTCAAGAGATCCTGAGAACATGTACC | + |
|
Preference number: 3 (lower is better) Translates to: IYSEPNMSGHGL*HSLQEILRTCT Trigger: GGTACATGTTCTCAGGATCTCTTGAAGGCTGTGTCACAGGCCATGGCCACTCATATTTGGCTCAGAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR CCA 72 bp | CAGCCTTCAAGAGATCCTGAGAACATGTACCAAAGGTaGTTTGGGTGCAGCTTGGTTTCATACATTTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QPSRDPENMYQR*FGCSLVSYILG Trigger: CCCTAAAATGTATGAAACCAAGCTGCACCCAAACCACCTTTGGTACATGTTCTCAGGATCTCTTGAAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR CCA 72 bp | CATTGGTTTGATCCAGAAAGGTGGGACAATTTGAAGTaGGGCTTCCAGGCTACAGGTAAATTCAAATGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HWFDPERWDNLK*GFQATGKFKCF Trigger: AAAACATTTGAATTTACCTGTAGCCTGGAAGCCCCACTTCAAATTGTCCCACCTTTCTGGATCAAACCAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR TCA 72 bp | GCTATCATTGCACCTTATACAATATCTAATTGCTCCTaGTGGATTAAATCTATACCTGTCCCACTATCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: AIIAPYTISNCS*WIKSIPVPLSP Trigger: GGGGGATAGTGGGACAGGTATAGATTTAATCCATCAGGAGCAATTAGATATTGTATAAGGTGCAATGATAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| 3UTR TCA 72 bp | AAATACATTGGTTTGATCCAGAAAGGTGGGACAATTTaGAGTGGGGCTTCCAGGCTACAGGTAAATTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KYIGLIQKGGTI*SGASRLQVNSN Trigger: ATTTGAATTTACCTGTAGCCTGGAAGCCCCACTTCAAATTGTCCCACCTTTCTGGATCAAACCAATGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR TCA 72 bp | AATATTCATCAATGGCATATTGGTACTTTGGGGTGCTaGTACCCAAAACAGATGCAATCTTCTCTCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NIHQWHIGTLGC*YPKQMQSSLQG Trigger: TCCTTGGAGAGAAGATTGCATCTGTTTTGGGTATCAGCACCCCAAAGTACCAATATGCCATTGATGAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| 3UTR CCA 72 bp | GCTACAGGTAAATTCAAATGTTTTCTGGTTGACACTTaGCTGAGTTTGTCTAAAGACCTTGTATTTTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ATGKFKCFLVDT*LSLSKDLVFSA Trigger: AGCTGAAAATACAAGGTCTTTAGACAAACTCAGCCAAGTGTCAACCAGAAAACATTTGAATTTACCTGTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR GCA 90 bp | TATCACCCCAGGAACCCGAGGCCGCCCCAGAGTCTGCTGTGCTGCCAGCCAAGGGCGGCCCCACCTACCTaGCCTGCAGATTCCCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YHPRNPRPPQSLLCCQPRAAPPT*PADSPN Trigger: ATTCGGGGAATCTGCAGGGCAGGTAGGTGGGGCCGC...CCTTGGCTGGCAGCACAGCAGACTCTGGGGCGGCCTCGGGTTCCTGGGGTGATA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000553852.1 |
||
| CDS-3UTR TCA 90 bp | GCTGGACTATCACCCCAGGAACCCGAGGCCGCCCCAGAGTCTGCTGTGCTGCCAGAAACAGGGGTGCAGTaGGGAGGAACTCCAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLSPQEPEAAPESAVLPETGVQ*GGTPKL Trigger: CAGCTTTGGAGTTCCTCCTCACTGCACCCCTGTTTC...TGGCAGCACAGCAGACTCTGGGGCGGCCTCGGGTTCCTGGGGTGATAGTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGACTATCACCCCAGGAACCCGAGGCCGCCCCAGAGTCTGCTGTGCTGCCGCACCAGAAGAGACTaGGAAGTGGTTGAAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLDYHPRNPRPPQSLLCCRTRRD*EVVEAA Trigger: GGCGGCTTCAACCACTTCTCAGTCTCTTCTGGTGCG...GCAGCACAGCAGACTCTGGGGCGGCCTCGGGTTCCTGGGGTGATAGTCCAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCTACTGCAAGGACAGCCTTTGGGGGACACGCCTTTCTTCTTCCTCTGGTAAAAGCTGGGGCGGCCTaGTCGGAGGACGGCCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PATARTAFGGHAFLLPLVKAGAA*SEDGRA Trigger: TGCGCGGCCGTCCTCCGAGCAGGCCGCCCCAGCTTT...TACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCAGTAGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR GCA 90 bp | GGGCGCTCCTTCCCACAAGCTGGTCTCAGTGAGCAGAAACAGGGGTGCAGTGAGCCCCAGAGTCTGCTGTaGTGCCAGCCAAGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRSFPQAGLSEQKQGCSEPQSLL*CQPRGW Trigger: CCAACCCCTTGGCTGGCAGCACAGCAGACTCTGGGG...CTCACTGCACCCCTGTTTCTGCTCACTGAGACCAGCTTGTGGGAAGGAGCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR TCA 90 bp | AGAAACAGGGGTGCAGTGAGGAGGAACTCCAAAGCTGGGGCGGCCTGCTCGGAGACAAGCTGGTCTCAGTaGGCAGAAACAGGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNRGAVRRNSKAGAACSETSWSQ*AETGVQ Trigger: CTGCACCCCTGTTTCTGCTCACTGAGACCAGCTTGT...CTCCGAGCAGGCCGCCCCAGCTTTGGAGTTCCTCCTCACTGCACCCCTGTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTCTGGTAGACCAGAAGCTGGACTATCACCCCAGGAACCCGAGGCCGCCAGACTGAGAAGTGGTTaGAGCCGCCCTCACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSGRPEAGLSPQEPEAARLRSG*SRPHLA Trigger: AGCCAGGTGAGGGCGGCTTCAACCACTTCTCAGTCT...GGCGGCCTCGGGTTCCTGGGGTGATAGTCCAGCTTCTGGTCTACCAGAGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGACTATCACCCCAGGAACCCGAGGCCGCCCCAGAGTCTGCTGTGCTGCTGCAAGGACAGCCTTTaGGGGACACGCCTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLDYHPRNPRPPQSLLCCCKDSL*GTRLSS Trigger: AGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCA...GCAGCACAGCAGACTCTGGGGCGGCCTCGGGTTCCTGGGGTGATAGTCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGCAGAAACAGGGGTGCAGTGAGGAGGAACTCCAAAGCTGGGGCGGCCTGCGAAGAGACTGAGAAGTaGTTGAAGCCGCCCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSRNRGAVRRNSKAGAACEETEK*LKPPSP Trigger: AGGTGAGGGCGGCTTCAACCACTTCTCAGTCTCTTC...GCAGGCCGCCCCAGCTTTGGAGTTCCTCCTCACTGCACCCCTGTTTCTGCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGACACGCCTTTCTTCTTCCTCTGGTAGACCAGAAGCTGGACTATCACCCCCTGGCTTCCAGCTACTaGAAGGACAGCCTTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGHAFLLPLVDQKLDYHPLASSY*KDSLWG Trigger: CCCCCAAAGGCTGTCCTTGCAGTAGCTGGAAGCCAG...GGGGTGATAGTCCAGCTTCTGGTCTACCAGAGGAAGAAGAAAGGCGTGTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTTCCCCGCCCAGTCGCTaGCCGAGCCAGGCTGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATSPPSR*PSQAVG Trigger: CCCGACAGCCTGGCTCGGCCAGCGACTGGGCGGGGA...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280987.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGCTGGACTATCACCCCAGGAACCCGAGGCCGCCCCAGAGTCTGCTGTGCTTTCGTTACTCATCTaGCTTCCAGCTACTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEAGLSPQEPEAAPESAVLSLLI*LPATAR Trigger: CCTTGCAGTAGCTGGAAGCCAGATGAGTAACGAAAG...CACAGCAGACTCTGGGGCGGCCTCGGGTTCCTGGGGTGATAGTCCAGCTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553852.1 |
||
| CDS-3UTR TCA 90 bp | GTGAGCAGAAACAGGGGTGCAGTGAGGAGGAACTCCAAAGCTGGGGCGGCCTGCGGTACTTTGGGGTGCTaGTACCCAAAACAGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSRNRGAVRRNSKAGAACGTLGC*YPKQMQ Trigger: TTGCATCTGTTTTGGGTATCAGCACCCCAAAGTACC...GCAGGCCGCCCCAGCTTTGGAGTTCCTCCTCACTGCACCCCTGTTTCTGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGACACGCCTTTCTTCTTCCTCTGGTAGACCAGAAGCTGGACTATCACCCCGAAACAGGGGTGCAGTaGGGAGGAACTCCAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGHAFLLPLVDQKLDYHPETGVQ*GGTPKL Trigger: CAGCTTTGGAGTTCCTCCTCACTGCACCCCTGTTTC...GGGGTGATAGTCCAGCTTCTGGTCTACCAGAGGAAGAAGAAAGGCGTGTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR GCA 90 bp | ACACGCCTTTCTTCTTCCTCTGGTAGACCAGAAGCTGGACTATCACCCCAGGAACAAGCAAAGGGCAGATaGCCAGGCAGGCGCTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRLSSSSGRPEAGLSPQEQAKGR*PGRRSH Trigger: GTGCGAGCGCCTGCCTGGGCATCTGCCCTTTGCTTG...TTCCTGGGGTGATAGTCCAGCTTCTGGTCTACCAGAGGAAGAAGAAAGGCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| CDS-3UTR CCA 90 bp | ACACGCCTTTCTTCTTCCTCTGGTAGACCAGAAGCTGGACTATCACCCCAGGAAGAGGAACTCCAAAGCTaGGGCGGCCTGCTCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRLSSSSGRPEAGLSPQEEELQS*GGLLGG Trigger: TCCTCCGAGCAGGCCGCCCCAGCTTTGGAGTTCCTC...TTCCTGGGGTGATAGTCCAGCTTCTGGTCTACCAGAGGAAGAAGAAAGGCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTCAGGCTGTCGGGAAGTaGGACTCACCCGCCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATQAVGK*DSPAQR Trigger: GCGCTGGGCGGGTGAGTCCCACTTCCCGACAGCCTG...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280987.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTGTCACCAGCGGCGTCTaGGGCAGTCACCCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATVTSGV*GSHPAG Trigger: TCCTGCGGGGTGACTGCCCCAGACGCCGCTGGTGAC...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396472.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTGCTGGCGCTGAAGCCTaGCGTCTCGACCTCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATAGAEA*RLDLGA Trigger: TGCGCCGAGGTCGAGACGCCAGGCTTCAGCGCCAGC...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396472.5 |
||
| CDS-3UTR GCA 90 bp | TTTGGGGGACACGCCTTTCTTCTTCCTCTGGTAGACCAGAAGCTGGACTATCACCTGGCTTCCAGCTACTaGAAGGACAGCCTTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGGHAFLLPLVDQKLDYHLASSY*KDSLWG Trigger: CCCCCAAAGGCTGTCCTTGCAGTAGCTGGAAGCCAG...GTGATAGTCCAGCTTCTGGTCTACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR CCA 90 bp | GGGCGCTCCTTCCCACAAGCTGGTCTCAGTGAGCAGAAACAGGGGTGCAGTGAGGGCATATTGGTACTTTaGGGTGCTGATACCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRSFPQAGLSEQKQGCSEGILVL*GADTQN Trigger: GTTTTGGGTATCAGCACCCCAAAGTACCAATATGCC...CTCACTGCACCCCTGTTTCTGCTCACTGAGACCAGCTTGTGGGAAGGAGCGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTACTGCAAGGACAGCCTTTGGGGGACACGCCTTTCTTCTTCCTCTGGTTGCAAGGACAGCCTTTaGGGGACACGCCTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSYCKDSLWGTRLSSSSGCKDSL*GTRLSS Trigger: AGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCA...ACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCAGTAGCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGGGGACACGCCTTTCTTCTTCCTCTGGTAGACCAGAAGCTGGACTATCACACAAGCTGGTCTCAGTaGGCAGAAACAGGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FGGHAFLLPLVDQKLDYHTSWSQ*AETGVQ Trigger: CTGCACCCCTGTTTCTGCTCACTGAGACCAGCTTGT...GTGATAGTCCAGCTTCTGGTCTACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS-3UTR GCA 90 bp | TATTCATCAATGGCATATTGGTACTTTGGGGTGCTGATACCCAAAACAGATGCAAAAGCTGGGGCGGCCTaGTCGGAGGACGGCCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YSSMAYWYFGVLIPKTDAKAGAA*SEDGRA Trigger: TGCGCGGCCGTCCTCCGAGCAGGCCGCCCCAGCTTT...TGCATCTGTTTTGGGTATCAGCACCCCAAAGTACCAATATGCCATTGATGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTGCCCACTTCCATCCTTaGTCTCCCCGCCCAGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATAHFHP*SPRPVA Trigger: AGCGACTGGGCGGGGAGACCAAGGATGGAAGTGGGC...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280987.9 |
||
| CDS-3UTR TCA 90 bp | GCCAAATATGAGTGGCCATGGCCTGTGACACAGCCTTCAAGAGATCCTGAGAACAAAGGTGGGACAATTTaGAGTGGGGCTTCCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AKYEWPWPVTQPSRDPENKGGTI*SGASRL Trigger: TAGCCTGGAAGCCCCACTTCAAATTGTCCCACCTTT...GTTCTCAGGATCTCTTGAAGGCTGTGTCACAGGCCATGGCCACTCATATTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTAGCCTCCCGAGCAGCTaGGATTACAGACGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATSLPSS*DYRRAP Trigger: TGGTGCACGTCTGTAATCCCAGCTGCTCGGGAGGCT...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTGTTACTCATCTGCCCTaGAGATTCCCCGAATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATVTHLP*RFPECR Trigger: GCGGCATTCGGGGAATCTGCAGGGCAGATGAGTAAC...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR CCA 90 bp | ACACGCCTTTCTTCTTCCTCTGGTAGACCAGAAGCTGGACTATCACCCCAGGAAAAGCTGGTAAACGTTTaGCATATGCCAAGCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLSSSSGRPEAGLSPQEKLVNV*HMPSKG Trigger: CCCTTTGCTTGGCATATGCCAAACGTTTACCAGCTT...TTCCTGGGGTGATAGTCCAGCTTCTGGTCTACCAGAGGAAGAAGAAAGGCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| CDS-3UTR CCA 90 bp | GCCAAATATGAGTGGCCATGGCCTGTGACACAGCCTTCAAGAGATCCTGAGAACTTTGATCCAGAAAGGTaGGACAATTTGAAGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AKYEWPWPVTQPSRDPENFDPER*DNLKWG Trigger: GCCCCACTTCAAATTGTCCCACCTTTCTGGATCAAA...GTTCTCAGGATCTCTTGAAGGCTGTGTCACAGGCCATGGCCACTCATATTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTGCATCAGCAGGGAGTTaGGACAGTCCAAAACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATASAGS*DSPKQQ Trigger: TTGCTGTTTTGGACTGTCTCAACTCCCTGCTGATGC...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396472.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTATGGGATGTGGTTGCTaGTCTGACTCTGTATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATMGCGC*SDSVWW Trigger: CCACCATACAGAGTCAGATCAGCAACCACATCCCAT...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396472.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTTCTGACTCTGTATGGTaGCATCAGCAGGGAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATSDSVW*HQQGVE Trigger: CTCAACTCCCTGCTGATGCCACCATACAGAGTCAGA...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396472.5 |
||
| CDS-3UTR CCA 90 bp | CTGGTTGACACTTGGCTGAGTTTGTCTAAAGACCTTGTATTTTCAGCTGCCTGCTGGGACAATTTGAAGTaGGGCTTCCAGGCTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVDTWLSLSKDLVFSAACWDNLK*GFQATG Trigger: ACCTGTAGCCTGGAAGCCCCACTTCAAATTGTCCCA...GCAGGCAGCTGAAAATACAAGGTCTTTAGACAAACTCAGCCAAGTGTCAACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTGGTACTTTGGGGTGCTaGTACCCAAAACAGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATGTLGC*YPKQMQ Trigger: TTGCATCTGTTTTGGGTATCAGCACCCCAAAGTACC...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR TCA 90 bp | GCCAAATATGAGTGGCCATGGCCTGTGACACAGCCTTCAAGAGATCCTGAGAACATTGACATTCACAAATaGGCTGGATATCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AKYEWPWPVTQPSRDPENIDIHK*AGYHCL Trigger: GAGACAGTGATATCCAGCTCATTTGTGAATGTCAAT...GTTCTCAGGATCTCTTGAAGGCTGTGTCACAGGCCATGGCCACTCATATTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTATGTGGTTGCTGATCTaGCTCTGTATGGTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATMWLLI*LCMVAS Trigger: TGATGCCACCATACAGAGTCAGATCAGCAACCACAT...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396472.5 |
||
| CDS-3UTR CCA 90 bp | CCAGCTACTGCAAGGACAGCCTTTGGGGGACACGCCTTTCTTCTTCCTCTGGTAGATAATATTCATCAATaGCATATTGGTACTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PATARTAFGGHAFLLPLVDNIHQ*HIGTLG Trigger: CCCCAAAGTACCAATATGCCATTGATGAATATTATC...TACCAGAGGAAGAAGAAAGGCGTGTCCCCCAAAGGCTGTCCTTGCAGTAGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553955.2 |
||
| CDS-3UTR CCA 90 bp | GCCAAATATGAGTGGCCATGGCCTGTGACACAGCCTTCAAGAGATCCTGAGAACCATTCACAAATGAGCTaGATATCACTGTCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AKYEWPWPVTQPSRDPENHSQMS*ISLSLV Trigger: AACCAGAGACAGTGATATCCAGCTCATTTGTGAATG...GTTCTCAGGATCTCTTGAAGGCTGTGTCACAGGCCATGGCCACTCATATTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR CCA 90 bp | GCCAAATATGAGTGGCCATGGCCTGTGACACAGCCTTCAAGAGATCCTGAGAACTTTCTGGTTGACACTTaGCTGAGTTTGTCTAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AKYEWPWPVTQPSRDPENFLVDT*LSLSKD Trigger: GTCTTTAGACAAACTCAGCCAAGTGTCAACCAGAAA...GTTCTCAGGATCTCTTGAAGGCTGTGTCACAGGCCATGGCCACTCATATTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTGGCATATTGGTACTTTaGGGTGCTGATACCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATGILVL*GADTQN Trigger: GTTTTGGGTATCAGCACCCCAAAGTACCAATATGCC...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTTCTCTTCCTTCTTACTaGCAAGCAGGGCAATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATSLPSY*QAGQST Trigger: TGTTGATTGCCCTGCTTGCCAGTAAGAAGGAAGAGA...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396472.5 |
||
| CDS-3UTR CCA 90 bp | CTGGTTGACACTTGGCTGAGTTTGTCTAAAGACCTTGTATTTTCAGCTGCCTGCGGTAATTGGTGGCTTTaGGAAGCTGCATCAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVDTWLSLSKDLVFSAACGNWWL*EAASEV Trigger: AACTTCTGATGCAGCTTCCCAAAGCCACCAATTACC...GCAGGCAGCTGAAAATACAAGGTCTTTAGACAAACTCAGCCAAGTGTCAACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTCCTTCAACCTGTAGTTaGAGAACTCAGTTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATPSTCS*RTQFMF Trigger: GAACATGAACTGAGTTCTTCAACTACAGGTTGAAGG...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR TCA 90 bp | CTGGTTGACACTTGGCTGAGTTTGTCTAAAGACCTTGTATTTTCAGCTGCCTGCCAAATGTTTTCTGGTTaGCACTTGGCTGAGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVDTWLSLSKDLVFSAACQMFSG*HLAEFV Trigger: GACAAACTCAGCCAAGTGTCAACCAGAAAACATTTG...GCAGGCAGCTGAAAATACAAGGTCTTTAGACAAACTCAGCCAAGTGTCAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR TCA 90 bp | TGTCTAAAGACCTTGTATTTTCAGCTGCCTGCTGAAGATGAAGTCTTACTACAGATTCTGAGCCAAATATaGGTGGCCATGGCCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLKTLYFQLPAEDEVLLQILSQI*VAMACD Trigger: GTCACAGGCCATGGCCACTCATATTTGGCTCAGAAT...CTGTAGTAAGACTTCATCTTCAGCAGGCAGCTGAAAATACAAGGTCTTTAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTATTGACATTCACAAATaGGCTGGATATCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATIDIHK*AGYHCL Trigger: GAGACAGTGATATCCAGCTCATTTGTGAATGTCAAT...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTCCAAATAAATATCTGTaGGTGAGAGGTACTATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATPNKYL*VRGTIS Trigger: CGAGATAGTACCTCTCACTCACAGATATTTATTTGG...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTCAGGACCTCGGTTTTTaGACTTGTAAAATGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATQDLGF*TCKMKT Trigger: TGTCTTCATTTTACAAGTGCAAAAACCGAGGTCCTG...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396472.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTCATTCACAAATGAGCTaGATATCACTGTCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATHSQMS*ISLSLV Trigger: AACCAGAGACAGTGATATCCAGCTCATTTGTGAATG...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTTCAGTTCATGTTCATTaGCAGATTTCCATTACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATSVHVH*QISITD Trigger: GTCTGTAATGGAAATCTGTCAATGAACATGAACTGA...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTATGAATCCATGTAGCTaGACACTCCTAATGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATMNPCS*TLLMKS Trigger: ACTTTTCATTAGGAGTGTTCAGCTACATGGATTCAT...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTATAAATATCTGTGAGTaGGAGGTACTATCTCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATINICE*EVLSRM Trigger: CATTCGAGATAGTACCTCTCACTCACAGATATTTAT...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR CCA 90 bp | AATTGGTGGCTTTGGGAAGCTGCATCAGAAGTTGATAATACAAGTTACTTAACCAAATATGAGTGGCCATaGCCTGTGACACAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NWWLWEAASEVDNTSYLTKYEWP*PVTQPS Trigger: TGAAGGCTGTGTCACAGGCCATGGCCACTCATATTT...GGTTAAGTAACTTGTATTATCAACTTCTGATGCAGCTTCCCAAAGCCACCAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| 3UTR CAA 72 bp | GAAATACATTGGTTTGATCCAGAAAGGTGGGACAATTaGAAGTGGGGCTTCCAGGCTACAGGTAAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EIHWFDPERWDN*KWGFQATGKFK Trigger: TTTGAATTTACCTGTAGCCTGGAAGCCCCACTTCAAATTGTCCCACCTTTCTGGATCAAACCAATGTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTGATAATATTCATCAATaGCATATTGGTACTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGVANQIQVNCPVFTVATDNIHQ*HIGTLG Trigger: CCCCAAAGTACCAATATGCCATTGATGAATATTATC...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR CCA 90 bp | AATTGGTGGCTTTGGGAAGCTGCATCAGAAGTTGATAATACAAGTTACTTAACCGTACCAAAGGTGGTTTaGGTGCAGCTTGGTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: NWWLWEAASEVDNTSYLTVPKVV*VQLGFI Trigger: TATGAAACCAAGCTGCACCCAAACCACCTTTGGTAC...GGTTAAGTAACTTGTATTATCAACTTCTGATGCAGCTTCCCAAAGCCACCAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR CCA 90 bp | AATTGGTGGCTTTGGGAAGCTGCATCAGAAGTTGATAATACAAGTTACTTAACCTCTGAATTTCAGATCTaGCTTTTGCTAGATAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: NWWLWEAASEVDNTSYLTSEFQI*LLLDRS Trigger: GGATCTATCTAGCAAAAGCCAGATCTGAAATTCAGA...GGTTAAGTAACTTGTATTATCAACTTCTGATGCAGCTTCCCAAAGCCACCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS CCA 90 bp | TTGGTCTCCCCGCCCAGTCGCTGGCCGAGCCAGGCTGTCGGGAAGTaGGACTCACCCGCCCAGCGCCCGCCTCGCGCCGCGCCTAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LVSPPSRWPSQAVGK*DSPAQRPPRAAPSQ Trigger: TTGGCTAGGCGCGGCGCGAGGCGGGCGCTGGGCGGGTGAGTCCCACTTCCCGACAGCCTGGCTCGGCCAGCGACTGGGCGGGGAGACCAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280987.9 |
||
| CDS CCA 90 bp | CTCAGTGAGCAGAAACAGGGGTGCAGTGAGGAGGAACTCCAAAGCTaGGGCGGCCTGCTCGGAGGACGGCCGCGCAGGCTAAAAGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSEQKQGCSEEELQS*GGLLGGRPRRLKER Trigger: CCGCTCTTTTAGCCTGCGCGGCCGTCCTCCGAGCAGGCCGCCCCAGCTTTGGAGTTCCTCCTCACTGCACCCCTGTTTCTGCTCACTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS CCA 90 bp | GGGAAAGGCTGGGTGTGGTGCCTCACGGCTATAGCCCCAGCACTGTaGGAGGCAGAGGTGGCTGGATCACGAGGTCAAGAGATCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: GKGWVWCLTAIAPAL*EAEVAGSRGQEIET Trigger: GGTCTCGATCTCTTGACCTCGTGATCCAGCCACCTCTGCCTCCCACAGTGCTGGGGCTATAGCCGTGAGGCACCACACCCAGCCTTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS-3UTR CAA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTAGCCCACTTCCATCCTaGGTCTCCCCGCCCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RGVANQIQVNCPVFTVATSPLPS*VSPPSR Trigger: GCGACTGGGCGGGGAGACCAAGGATGGAAGTGGGCT...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280987.9 |
||
| CDS GCA 90 bp | GATGCACCCCTGTACATTAACTGTGGTGCTCCTGGGACACCTGTGTaGAGAATTCGGAACTGTAGAAATAGCCTTCACATTGCTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DAPLYINCGAPGTPV*RIRNCRNSLHIAGG Trigger: CCCACCAGCAATGTGAAGGCTATTTCTACAGTTCCGAATTCTGCACACAGGTGTCCCAGGAGCACCACAGTTAATGTACAGGGGTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS-3UTR CAA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTGGCATCAGCAGGGAGTaGAGACAGTCCAAAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGVANQIQVNCPVFTVATGISRE*RQSKTA Trigger: TGCTGTTTTGGACTGTCTCAACTCCCTGCTGATGCC...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396472.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTTGACACTTGGCTGAGTTTGTCTAAAGACCTTGTATTTTCAGCTGCCTGCGTTTGTCTAAAGACCTaGTATTTTCAGCTGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVDTWLSLSKDLVFSAACVCLKT*YFQLPA Trigger: AGCAGGCAGCTGAAAATACAAGGTCTTTAGACAAAC...GCAGGCAGCTGAAAATACAAGGTCTTTAGACAAACTCAGCCAAGTGTCAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR CAA 90 bp | AATTGGTGGCTTTGGGAAGCTGCATCAGAAGTTGATAATACAAGTTACTTAACCGAAAGGTGGGACAATTaGAAGTGGGGCTTCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NWWLWEAASEVDNTSYLTERWDN*KWGFQA Trigger: AGCCTGGAAGCCCCACTTCAAATTGTCCCACCTTTC...GGTTAAGTAACTTGTATTATCAACTTCTGATGCAGCTTCCCAAAGCCACCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS-3UTR CAA 90 bp | AGAGGAGTGGCCAACCAGATTCAAGTAAACTGTCCAGTCTTCACTGTTGCTACTCTCAGTTCATGTTCATaGACAGATTTCCATTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGVANQIQVNCPVFTVATLSSCS*TDFHYR Trigger: TCTGTAATGGAAATCTGTCAATGAACATGAACTGAG...AGTAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280987.9 ENST00000396472.5 |
||
| CDS-3UTR CAA 90 bp | TGTCTAAAGACCTTGTATTTTCAGCTGCCTGCTGAAGATGAAGTCTTACTACAGTGGTTTGGGTGCAGCTaGGTTTCATACATTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CLKTLYFQLPAEDEVLLQWFGCS*VSYILG Trigger: CCCTAAAATGTATGAAACCAAGCTGCACCCAAACCA...CTGTAGTAAGACTTCATCTTCAGCAGGCAGCTGAAAATACAAGGTCTTTAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555260.1 |
||
| CDS TCA 90 bp | TCATCCGATAATATTCATCAATGGCATATTGGTACTTTGGGGTGCTaGTACCCAAAACAGATGCAATCTTCTCTCCAAGGAAGTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: SSDNIHQWHIGTLGC*YPKQMQSSLQGSHT Trigger: TGTGTGACTTCCTTGGAGAGAAGATTGCATCTGTTTTGGGTATCAGCACCCCAAAGTACCAATATGCCATTGATGAATATTATCGGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000280987.9 ENST00000382406.7 ENST00000396472.5 ENST00000554794.1 |
||
| CDS GCA 90 bp | TGGGATGTGTACAACTACTTAAACCTGGGAATTAGACTGGACACTTaGCCTCCTCATTTCCTGTTCACTAATTTTTGTGTGGTACTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: WDVYNYLNLGIRLDT*PPHFLFTNFCVVLY Trigger: GTAAAGTACCACACAAAAATTAGTGAACAGGAAATGAGGAGGGCAAGTGTCCAGTCTAATTCCCAGGTTTAAGTAGTTGTACACATCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS CCA 90 bp | CTCCTTCTTCATCCGATAATATTCATCAATGGCATATTGGTACTTTaGGGTGCTGATACCCAAAACAGATGCAATCTTCTCTCCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLHPIIFINGILVL*GADTQNRCNLLSKE Trigger: TTCCTTGGAGAGAAGATTGCATCTGTTTTGGGTATCAGCACCCCAAAGTACCAATATGCCATTGATGAATATTATCGGATGAAGAAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000280987.9 ENST00000382406.7 ENST00000396472.5 ENST00000554794.1 |
||
| CDS TCA 90 bp | AAGGTTGGAGATGACAAGAGAGCCCCATTTTGGATACTTCAAGTTTaGGATGCCAGTTGTCCTATAAACTTGAAAGTATCTCAGATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: KVGDDKRAPFWILQV*DASCPINLKVSQIY Trigger: GTAGATCTGAGATACTTTCAAGTTTATAGGACAACTGGCATCTCAAACTTGAAGTATCCAAAATGGGGCTCTCTTGTCATCTCCAACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS GCA 90 bp | GAGGTGGAAGTTTCCCAGGGTCTATCAAAATTCTACATGTGCATATaGTACAACCCAGCAGGTCCACTTATAGAAATTGTATTCTATATT | + |
|
Preference number: 5 (lower is better) Translates to: EVEVSQGLSKFYMCI*YNPAGPLIEIVFYI Trigger: AATATAGAATACAATTTCTATAAGTGGACCTGCTGGGTTGTAGCATATGCACATGTAGAATTTTGATAGACCCTGGGAAACTTCCACCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS CCA 72 bp | CCGCCCAGTCGCTGGCCGAGCCAGGCTGTCGGGAAGTaGGACTCACCCGCCCAGCGCCCGCCTCGCGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPSRWPSQAVGK*DSPAQRPPRAA Trigger: CGCGGCGCGAGGCGGGCGCTGGGCGGGTGAGTCCCACTTCCCGACAGCCTGGCTCGGCCAGCGACTGGGCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280987.9 |
||
| CDS CCA 72 bp | GTCTCGACCTCGGCGCAGCCCGTCACCAGCGGCGTCTaGGGCAGTCACCCCGCAGGACCTCGGTTTTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VSTSAQPVTSGV*GSHPAGPRFLH Trigger: GTGCAAAAACCGAGGTCCTGCGGGGTGACTGCCCCAGACGCCGCTGGTGACGGGCTGCGCCGAGGTCGAGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396472.5 ENST00000555211.5 |
||
| CDS CCA 72 bp | AGCCCACTTCCATCCTTGGTCTCCCCGCCCAGTCGCTaGCCGAGCCAGGCTGTCGGGAAGTGGGACTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: SPLPSLVSPPSR*PSQAVGKWDSP Trigger: GGGTGAGTCCCACTTCCCGACAGCCTGGCTCGGCCAGCGACTGGGCGGGGAGACCAAGGATGGAAGTGGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280987.9 |
||
| CDS CCA 72 bp | CAGAAACAGGGGTGCAGTGAGGAGGAACTCCAAAGCTaGGGCGGCCTGCTCGGAGGACGGCCGCGCAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: QKQGCSEEELQS*GGLLGGRPRRL Trigger: TAGCCTGCGCGGCCGTCCTCCGAGCAGGCCGCCCCAGCTTTGGAGTTCCTCCTCACTGCACCCCTGTTTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553852.1 ENST00000553955.2 |
||
| CDS CCA 72 bp | TACATCCTTTGTGTAAAAAGAGGGAAAGGCTGGGTGTaGTGCCTCACGGCTATAGCCCCAGCACTGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: YILCVKRGKGWV*CLTAIAPALWE Trigger: CTCCCACAGTGCTGGGGCTATAGCCGTGAGGCACCACACCCAGCCTTTCCCTCTTTTTACACAAAGGATGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS GCA 72 bp | CTGTACATTAACTGTGGTGCTCCTGGGACACCTGTGTaGAGAATTCGGAACTGTAGAAATAGCCTTCACATT | + |
|
Preference number: 6 (lower is better) Translates to: LYINCGAPGTPV*RIRNCRNSLHI Trigger: AATGTGAAGGCTATTTCTACAGTTCCGAATTCTGCACACAGGTGTCCCAGGAGCACCACAGTTAATGTACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS CCA 72 bp | ATTGCTGGTGGGAGTATAAAATTCACATGGCGTTTGTaGGGAGGTGGAAGTTTCCCAGGGTCTATCAAAATT | + |
|
Preference number: 6 (lower is better) Translates to: IAGGSIKFTWRL*GGGSFPGSIKI Trigger: AATTTTGATAGACCCTGGGAAACTTCCACCTCCCCACAAACGCCATGTGAATTTTATACTCCCACCAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS CAA 90 bp | TTCTTCTTCCTCCTTCTTCATCCGATAATATTCATCAATGGCATATaGGTACTTTGGGGTGCTGATACCCAAAACAGATGCAATCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FFFLLLHPIIFINGI*VLWGADTQNRCNLL Trigger: GAGAAGATTGCATCTGTTTTGGGTATCAGCACCCCAAAGTACCAATATGCCATTGATGAATATTATCGGATGAAGAAGGAGGAAGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000280987.9 ENST00000382406.7 ENST00000396472.5 ENST00000554794.1 |
||
| CDS GCA 72 bp | GTTTCCCAGGGTCTATCAAAATTCTACATGTGCATATaGTACAACCCAGCAGGTCCACTTATAGAAATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VSQGLSKFYMCI*YNPAGPLIEIV Trigger: TACAATTTCTATAAGTGGACCTGCTGGGTTGTAGCATATGCACATGTAGAATTTTGATAGACCCTGGGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS GCA 72 bp | TACAACTACTTAAACCTGGGAATTAGACTGGACACTTaGCCTCCTCATTTCCTGTTCACTAATTTTTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: YNYLNLGIRLDT*PPHFLFTNFCV Trigger: CACACAAAAATTAGTGAACAGGAAATGAGGAGGGCAAGTGTCCAGTCTAATTCCCAGGTTTAAGTAGTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS CCA 72 bp | CATCCGATAATATTCATCAATGGCATATTGGTACTTTaGGGTGCTGATACCCAAAACAGATGCAATCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HPIIFINGILVL*GADTQNRCNLL Trigger: GAGAAGATTGCATCTGTTTTGGGTATCAGCACCCCAAAGTACCAATATGCCATTGATGAATATTATCGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000280987.9 ENST00000382406.7 ENST00000396472.5 ENST00000554794.1 |
||
| CDS TCA 72 bp | GATGACAAGAGAGCCCCATTTTGGATACTTCAAGTTTaGGATGCCAGTTGTCCTATAAACTTGAAAGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: DDKRAPFWILQV*DASCPINLKVS Trigger: AGATACTTTCAAGTTTATAGGACAACTGGCATCTCAAACTTGAAGTATCCAAAATGGGGCTCTCTTGTCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||
| CDS GCA 72 bp | CAAGAGAGCCCCATTTTGGATACTTCAAGTTTGAGATaGCAGTTGTCCTATAAACTTGAAAGTATCTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QESPILDTSSLR*QLSYKLESISD Trigger: ATCTGAGATACTTTCAAGTTTATAGGACAACTGGCATCTCAAACTTGAAGTATCCAAAATGGGGCTCTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553901.1 |
||